CmaCh18G005780 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G005780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ATP synthase subunit alpha, chloroplastic
Location	Cma_Chr18: 3886691 .. 3887269 (+)
RNA-Seq Expression	CmaCh18G005780
Synteny	CmaCh18G005780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGATGGTTTGCAAATACAGGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGCGAGGCTTATTTAGGTCGTATTATAAACGCCCTGGCTAAACCTATTGATGGACGAGGTGAAATTTCAGCTTCTGACTCTCAGTTAATTGAATCCCCCGCTCCTGGTATTATTTAGAGACGTTCCGTATATGAGTCTTTTCAAACAGGACTTATTGCTATTGATGTGATGATTCCTATCAGACGTGGTCAGCGAGAATTAATTATTGGGGACAGACAGACCTATAAAACTGCAGTAGCCACGGATACGATTTTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTATTTTACAGGAAAGGAGGGCAATGGAATACACTATTATAGTAGCTCAGATGGCTGATTCTCCAGCTACATTACAATACCCTGCCCCTTATACAGGAGCTACTTTGGCTGAATATTTGATGTACAGAAAACAACACACTTTAATCTGCCCCTTATACAGGAGCTACTTTGGCTGA

mRNA sequence

ATGGGTGATGGTTTGCAAATACAGGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGCGAGGCTTATTTAGGTCGTATTATAAACGCCCTGGCTAAACCTATTGATGGACGAGGTGAAATTTCAGCTTCTGACTCTCAGTTAATTGAATCCCCCGCTCCTGGACTTATTGCTATTGATGTGATGATTCCTATCAGACGTGGTCAGCGAGAATTAATTATTGGGGACAGACAGACCTATAAAACTGCAGTAGCCACGGATACGATTTTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTATTTTACAGGAAAGGAGGGCAATGGAATACACTATTATAGTAGCTCAGATGGCTGATTCTCCAGCTACATTACAATACCCTGCCCCTTATACAGGAGCTACTTTGGCTGAATATTTGATGTACAGAAAACAACACACTTTAATCTGCCCCTTATACAGGAGCTACTTTGGCTGA

Coding sequence (CDS)

ATGGGTGATGGTTTGCAAATACAGGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGCGAGGCTTATTTAGGTCGTATTATAAACGCCCTGGCTAAACCTATTGATGGACGAGGTGAAATTTCAGCTTCTGACTCTCAGTTAATTGAATCCCCCGCTCCTGGACTTATTGCTATTGATGTGATGATTCCTATCAGACGTGGTCAGCGAGAATTAATTATTGGGGACAGACAGACCTATAAAACTGCAGTAGCCACGGATACGATTTTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTATTTTACAGGAAAGGAGGGCAATGGAATACACTATTATAGTAGCTCAGATGGCTGATTCTCCAGCTACATTACAATACCCTGCCCCTTATACAGGAGCTACTTTGGCTGAATATTTGATGTACAGAAAACAACACACTTTAATCTGCCCCTTATACAGGAGCTACTTTGGCTGA

Protein sequence

MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAPGLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQHTLICPLYRSYFG

Homology

[Close]

BLAST of CmaCh18G005780 vs. ExPASy Swiss-Prot
Match: Q06RE6 (ATP synthase subunit alpha, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=atpA PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-74
Identity = 151/183 (82.51%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL I+EGSSVKATGRIAQIPVSEAYLGR++NALAKPIDGRGEISAS+S+LIESPAP 
Sbjct: 77  MGDGLMIEEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRGEISASESRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GL+AID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLVAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQE  AMEYTI+VA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQEGGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy Swiss-Prot
Match: B1NWD5 (ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta OX=3983 GN=atpA PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.1e-74
Identity = 152/183 (83.06%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISAS+S+LIESPAP 
Sbjct: 77  MGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTI+VA+ ADSPATLQY APYTGA LAEY MYR++H
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy Swiss-Prot
Match: Q0ZJ35 (ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera OX=29760 GN=atpA PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.1e-74
Identity = 152/183 (83.06%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISAS+S+LIESPAP 
Sbjct: 77  MGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT  QER AMEYTI+VA+ ADSPATLQY APYTGA LAEY MYRK+H
Sbjct: 197 VAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRKRH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy Swiss-Prot
Match: Q09X32 (ATP synthase subunit alpha, chloroplastic OS=Morus indica OX=248361 GN=atpA PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.1e-74
Identity = 152/183 (83.06%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEA+LGR+INALAKPIDGRGEISAS+S+LIESPAP 
Sbjct: 77  MGDGLMIQEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGRGEISASESRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTI+VA+ ADSPATLQY APYTGATLAEY MYR+QH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGATLAEYFMYREQH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy Swiss-Prot
Match: Q2QDA3 (ATP synthase subunit alpha, chloroplastic OS=Cucumis sativus OX=3659 GN=atpA PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.3e-74
Identity = 153/183 (83.61%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEIS+SDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IILRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVV+ LQER AMEYTIIVA+ ADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVSTLQERGAMEYTIIVAETADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy TrEMBL
Match: A0A0S2IG79 (ATP synthase subunit alpha OS=Cucurbita moschata OX=3662 GN=atpA PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.2e-74
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy TrEMBL
Match: A0A0S2IE22 (ATP synthase subunit alpha OS=Cucurbita argyrosperma OX=34294 GN=atpA PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.2e-74
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy TrEMBL
Match: A0A2H4T1V9 (ATP synthase subunit alpha, chloroplastic OS=Cucurbita maxima OX=3661 GN=atpA PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.2e-74
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy TrEMBL
Match: A0A0S2IHI4 (ATP synthase subunit alpha OS=Cucurbita pepo var. texana OX=37651 GN=atpA PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.2e-74
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. ExPASy TrEMBL
Match: A0A0S2IH79 (ATP synthase subunit alpha OS=Cucurbita pepo subsp. fraterna OX=37649 GN=atpA PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.2e-74
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. NCBI nr
Match: YP_009505065.1 (ATP synthase CF1 alpha subunit [Cucurbita pepo] >ALO21744.1 AtpA [Cucurbita argyrosperma] >ALO21775.1 AtpA [Cucurbita argyrosperma var. palmeri] >ALO21877.1 AtpA [Cucurbita argyrosperma subsp. sororia] >ALO22589.1 AtpA [Cucurbita pepo subsp. fraterna] >ALO22636.1 AtpA [Cucurbita pepo subsp. ovifera] >ALO22733.1 AtpA [Cucurbita pepo var. ozarkana] >ALO22734.1 AtpA [Cucurbita pepo subsp. pepo] >ALO22815.1 AtpA [Cucurbita pepo var. texana])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. NCBI nr
Match: YP_009447520.1 (ATP synthase CF1 alpha subunit [Cucurbita moschata] >ALO22375.1 AtpA [Cucurbita moschata] >ATY69952.1 ATP synthase CF1 alpha subunit [Cucurbita moschata])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. NCBI nr
Match: YP_009447435.1 (ATP synthase CF1 alpha subunit [Cucurbita maxima] >ALO22292.1 AtpA [Cucurbita maxima subsp. andreana] >ATY69869.1 ATP synthase CF1 alpha subunit [Cucurbita maxima])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. NCBI nr
Match: ALO22253.1 (AtpA [Cucurbita lundelliana] >ALO22414.1 AtpA [Cucurbita okeechobeensis] >ALO22492.1 AtpA [Cucurbita okeechobeensis subsp. martinezii])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. NCBI nr
Match: ALO22033.1 (AtpA [Cucurbita ecuadorensis])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 157/183 (85.79%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATGRIAQIPVSEAYLGR+INALAKPIDGRGEISASDS+LIESPAP 
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTIIVA+MADSPATLQY APYTGA LAEY MYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

[Close]

BLAST of CmaCh18G005780 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 275.8 bits (704), Expect = 2.5e-74
Identity = 150/183 (81.97%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MGDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAP- 60
           MGDGL IQEGSSVKATG+IAQIPVSEAYLGR+INALA PIDGRG+ISAS+S+LIESPAP 
Sbjct: 77  MGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPG 136

Query: 61  -------------GLIAIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQQGQNVICVY 120
                        GLIAID MIPI RGQRELIIGDRQT KTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAEYLMYRKQH 170
           VAIGQKASSVAQVVT LQER AMEYTI+VA+ ADSPATLQY APYTGA LAEY MYR+QH
Sbjct: 197 VAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYREQH 256

[Close]

BLAST of CmaCh18G005780 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-38
Identity = 84/191 (43.98%), Postives = 116/191 (60.73%), Query Frame = 0


Query: 2   GDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAPGL 61
           G    I+EG  VK TG I  +P  +A LGR+++A+  PIDG+G +S  + + +E  APG+
Sbjct: 349 GGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHEQRRVEVKAPGI 408

Query: 62  I--------------AIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQ---------Q 121
           +              A+D ++PI RGQREL+IGDRQT KT +A DTILNQ         +
Sbjct: 409 LERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAIDTILNQKQINSRATSE 468

Query: 122 GQNVICVYVAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAE 170
            + + CVYVAIGQK S+V Q++  L+E  A+EY+I+VA  A  PA LQ+ APY+G  + E
Sbjct: 469 SETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQFLAPYSGCAMGE 528

[Close]

BLAST of CmaCh18G005780 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-37
Identity = 83/191 (43.46%), Postives = 115/191 (60.21%), Query Frame = 0


Query: 2   GDGLQIQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAPGL 61
           G    I+EG  VK TG I  +P  +A LGR+++A+  PIDG+G +S  + + +E  APG+
Sbjct: 79  GGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHEQRRVEVKAPGI 138

Query: 62  I--------------AIDVMIPIRRGQRELIIGDRQTYKTAVATDTILNQ---------Q 121
           +              A+D ++PI RGQREL+IG RQT KT +A DTILNQ         +
Sbjct: 139 LERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGKTTIAIDTILNQKQINSRATSE 198

Query: 122 GQNVICVYVAIGQKASSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAE 170
            + + CVYVAIGQK S+V Q++  L+E  A+EY+I+VA  A  PA LQ+ APY+G  + E
Sbjct: 199 SETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQFLAPYSGCAMGE 258

[Close]

BLAST of CmaCh18G005780 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 54.7 bits (130), Expect = 8.9e-08
Identity = 48/181 (26.52%), Postives = 75/181 (41.44%), Query Frame = 0


Query: 3   DGLQ-IQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAPGL 62
           DG + +  G  V  TG    +PV  A LGRI+N L +PID RGEI       I   AP L
Sbjct: 139 DGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198

Query: 63  I--------------AIDVMIPIRRGQRELIIGDRQTYKTAVATDTILN-QQGQNVICVY 122
           +               +D++ P +RG +  + G     KT +  + I N  +      V+
Sbjct: 199 VDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVF 258

Query: 123 VAIGQKA--------SSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAE 160
             +G++           +   V  L E+++     +V    + P   +     TG T+AE
Sbjct: 259 AGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAE 318

[Close]

BLAST of CmaCh18G005780 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 54.7 bits (130), Expect = 8.9e-08
Identity = 48/181 (26.52%), Postives = 75/181 (41.44%), Query Frame = 0


Query: 3   DGLQ-IQEGSSVKATGRIAQIPVSEAYLGRIINALAKPIDGRGEISASDSQLIESPAPGL 62
           DG + +  G  V  TG    +PV  A LGRI+N L +PID RGEI       I   AP L
Sbjct: 142 DGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 201

Query: 63  I--------------AIDVMIPIRRGQRELIIGDRQTYKTAVATDTILN-QQGQNVICVY 122
           +               +D++ P +RG +  + G     KT +  + I N  +      V+
Sbjct: 202 VDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVF 261

Query: 123 VAIGQKA--------SSVAQVVTILQERRAMEYTIIVAQMADSPATLQYPAPYTGATLAE 160
             +G++           +   V  L E+++     +V    + P   +     TG T+AE
Sbjct: 262 AGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAE 321

The following BLAST results are available for this feature:

BLAST of CmaCh18G005780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q06RE6	2.4e-74	82.51	ATP synthase subunit alpha, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=at...	[more]
B1NWD5	3.1e-74	83.06	ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta OX=3983 GN=atpA P...	[more]
Q0ZJ35	3.1e-74	83.06	ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera OX=29760 GN=atpA PE=...	[more]
Q09X32	4.1e-74	83.06	ATP synthase subunit alpha, chloroplastic OS=Morus indica OX=248361 GN=atpA PE=3...	[more]
Q2QDA3	5.3e-74	83.61	ATP synthase subunit alpha, chloroplastic OS=Cucumis sativus OX=3659 GN=atpA PE=...	[more]

BLAST of CmaCh18G005780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IG79	7.2e-74	85.79	ATP synthase subunit alpha OS=Cucurbita moschata OX=3662 GN=atpA PE=3 SV=1	[more]
A0A0S2IE22	7.2e-74	85.79	ATP synthase subunit alpha OS=Cucurbita argyrosperma OX=34294 GN=atpA PE=3 SV=1	[more]
A0A2H4T1V9	7.2e-74	85.79	ATP synthase subunit alpha, chloroplastic OS=Cucurbita maxima OX=3661 GN=atpA PE...	[more]
A0A0S2IHI4	7.2e-74	85.79	ATP synthase subunit alpha OS=Cucurbita pepo var. texana OX=37651 GN=atpA PE=3 S...	[more]
A0A0S2IH79	7.2e-74	85.79	ATP synthase subunit alpha OS=Cucurbita pepo subsp. fraterna OX=37649 GN=atpA PE...	[more]

BLAST of CmaCh18G005780 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009505065.1	1.5e-73	85.79	ATP synthase CF1 alpha subunit [Cucurbita pepo] >ALO21744.1 AtpA [Cucurbita argy...	[more]
YP_009447520.1	1.5e-73	85.79	ATP synthase CF1 alpha subunit [Cucurbita moschata] >ALO22375.1 AtpA [Cucurbita ...	[more]
YP_009447435.1	1.5e-73	85.79	ATP synthase CF1 alpha subunit [Cucurbita maxima] >ALO22292.1 AtpA [Cucurbita ma...	[more]
ALO22253.1	1.5e-73	85.79	AtpA [Cucurbita lundelliana] >ALO22414.1 AtpA [Cucurbita okeechobeensis] >ALO224...	[more]
ALO22033.1	1.5e-73	85.79	AtpA [Cucurbita ecuadorensis]	[more]

BLAST of CmaCh18G005780 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00120.1	2.5e-74	81.97	ATP synthase subunit alpha	[more]
AT2G07698.1	1.7e-38	43.98	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	1.1e-37	43.46	ATP synthase subunit 1	[more]
AT5G08670.1	8.9e-08	26.52	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	8.9e-08	26.52	ATP synthase alpha/beta family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.12240		coord: 1..171 e-value: 8.3E-55 score: 188.1
None	No IPR available	PANTHER	PTHR48082:SF6	ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC	coord: 1..170
None	No IPR available	PANTHER	PTHR48082	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 1..170
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 60..169 e-value: 6.1E-27 score: 94.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 21..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G005780.1	CmaCh18G005780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism