CmaCh18G005520 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGAAGAACACAAAAGAAAAGAAAAGGCTTTGATCATCAGAGGGAGCTGAAGCTGGAGAGCTCATTAACCTTTCTTTCTTTGTTTCCTTTTATGTCCATGAATGGAAATAGGGCGTTCCAACCCTCACCATCGGGCTGAATCAAACAACATAAAAATGGAGGGGAAGGTTCGTATGGTACCCATAATTTGAAAGTTCATAGACTAAATTTTACAGATTTTAATTAAAATGTTAGAAAACGACCAAGTTTCTTGTTGAAAATTTTAGTTTAATAAAATATTTGAATTATTAGCCAAATTCTAAAATTCTATTGTTTTTTTCGTTATTTGATGGTCCTTAATTTTACAGAATAAGTTCAAAATATATCCAAGGGGACTAGATATTACGTGGGGCAACGACAATCGTTATTGGATGTTATCAGACATGTAAGCTCTAAGCTGCAACTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGAAGTTTAATCTGAAATTTATTTTGTTAACTTGATTTTATAGATTTCGTTGTAGAAAAACCGAAAGGAATAATAATAATTAAAAAAAAGGTCTTCTTTGATGAATCACTATTCCTCCTGAGAATATATGCTAAAACCATGACACTAAAGGGCGAAAGTTCCCTTTGATAATTCTTTATTGAATCAAATAAATTACAAAGAATACGAAAAGATGAACAAAATTCAAGATATTTGTCTATAAGAAAGAGACAAATACGATACCTATGATAGATTGTAAATATCTATATATTTGTCTTGTTGGATGATGAAAGTCCCCCATCAGCTAATTTAGGGAATGATCATGGGTTTATAAATGAGGAATACTAACTCTATTGGCATGAGGCTTTTTGAGGAACCCCAAAGCAAAGTCAAAAGTCATGAGAGCTTATGCTCAAAGTAGATAATATCATATCATTATGGAGAGTCGTGCTCGTCTAACGGTCAAATAGGGTATCCTTTCAATACATAGTGTTTGATCTAAAAGCTAAGTGATATTTATGCTACTTTCTTGTGGATCTTTTCCTCTTCCTATAAGTTTCCTTTGGGAAGAGCCATCTAATTGAGTTGCTCTTTTAAGCCCATTGTTCCATGTAATAGTAGAAGAAATAAAATTTTTACACGAAAGGAAGAGTACATAGATGAACTGACGACATCAAATGAGAGTGATTTAAGAGTAAGATTGTTGAACCGAGATTAAAACAATTCAAGTTATTACCTATACCAACAAGGTTCACTTTCTTTTTTTTGATAGCTCAATTATTGTAATGGGCTAAATCTACTGTTAGCTGATATTGTCATTTTTGGGCTTTTCCTCTCGGGCTTCCTCATTTTTAAAACGTCTCTGCTAGGGAAAAGTTTCCACACCCATATAAAAGATGTTTCGTTTTCCTTCTCAACGATGCGGGATCTCACAATTCACTCTAAGAGTGCTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCATATAAACTCTAAAGTTAAACATGATTTGCTTTGACCAATTCTAAGTTGGATGACCTCTTACTTATTTTCCTATGAAACATGTGAATGAGGACAAGAAAATGTGTTAATTTGTGGAGATAATAGTTTTCATTCGAGAATCGACAAATAAGTAACGCGGTTATGTTACAAAGGATACAGGTTCCATATCGGAATTCCTTTGTTTCTTTCAATTGTGTTCATAATTTGTTGTTATTGTGATTTTGTAGGGAGGCGGAAGACAGTTTTGCAGAACTAAAACAAGTAAATTGGCTAGAAGTAACTGGTTCAACACCGAAAAATCTAAAGATTGGGGCTTGGTTCAAAGTGAGTTTCAATGTGACACTAAGACCCAATGCTTTTGGATGGGATGAGTGTAATGTTTACATAATGGCTAAGATTGGGAAAAAGGGGCATTACAGTTTCAAGAAGCTGAATCTTAATGTTAAACAACCAGAAGGAAGATTTAACATTCCCCATAATGAATTAAAAATTAAAGTTGCCAAGCCCAAAAACGGATCCGAAGAGGATCTCAAGCTCTACTTTGGTATGTATGAAGTTTGGAGCAACAGATGGAAAGGAGGGTTGAGGATCTATCATGCACTAGTTGAGGAGTGCGAGGCACCAAAAGAGAAAAAATTATGATGATCGTGTCTATAACAATTGCTATCGACTCGACGTGTGGTTTCAAGAACATGAGAATAATAGGAGAATAATAGAAGAATAATGTACTTGTAAATGTTGGCTGAATTCACTCCACCATATTTGAGAGTTCTCTTATTTATAATCAAATACAGAAATATGTTAAATTACA TTCGAAGAACACAAAAGAAAAGAAAAGGCTTTGATCATCAGAGGGAGCTGAAGCTGGAGAGCTCATTAACCTTTCTTTCTTTGTTTCCTTTTATGTCCATGAATGGAAATAGGGCGTTCCAACCCTCACCATCGGGCTGAATCAAACAACATAAAAATGGAGGGGAAGAATAAGTTCAAAATATATCCAAGGGGACTAGATATTACGTGGGGCAACGACAATCGTTATTGGATGTTATCAGACATGGAGGCGGAAGACAGTTTTGCAGAACTAAAACAAGTAAATTGGCTAGAAGTAACTGGTTCAACACCGAAAAATCTAAAGATTGGGGCTTGGTTCAAAGTGAGTTTCAATGTGACACTAAGACCCAATGCTTTTGGATGGGATGAGTGTAATGTTTACATAATGGCTAAGATTGGGAAAAAGGGGCATTACAGTTTCAAGAAGCTGAATCTTAATGTTAAACAACCAGAAGGAAGATTTAACATTCCCCATAATGAATTAAAAATTAAAGTTGCCAAGCCCAAAAACGGATCCGAAGAGGATCTCAAGCTCTACTTTGGTATGTATGAAGTTTGGAGCAACAGATGGAAAGGAGGGTTGAGGATCTATCATGCACTAGTTGAGGAGTGCGAGGCACCAAAAGAGAAAAAATTATGATGATCGTGTCTATAACAATTGCTATCGACTCGACGTGTGGTTTCAAGAACATGAGAATAATAGGAGAATAATAGAAGAATAATGTACTTGTAAATGTTGGCTGAATTCACTCCACCATATTTGAGAGTTCTCTTATTTATAATCAAATACAGAAATATGTTAAATTACA ATGGAAATAGGGCGTTCCAACCCTCACCATCGGGCTGAATCAAACAACATAAAAATGGAGGGGAAGAATAAGTTCAAAATATATCCAAGGGGACTAGATATTACGTGGGGCAACGACAATCGTTATTGGATGTTATCAGACATGGAGGCGGAAGACAGTTTTGCAGAACTAAAACAAGTAAATTGGCTAGAAGTAACTGGTTCAACACCGAAAAATCTAAAGATTGGGGCTTGGTTCAAAGTGAGTTTCAATGTGACACTAAGACCCAATGCTTTTGGATGGGATGAGTGTAATGTTTACATAATGGCTAAGATTGGGAAAAAGGGGCATTACAGTTTCAAGAAGCTGAATCTTAATGTTAAACAACCAGAAGGAAGATTTAACATTCCCCATAATGAATTAAAAATTAAAGTTGCCAAGCCCAAAAACGGATCCGAAGAGGATCTCAAGCTCTACTTTGGTATGTATGAAGTTTGGAGCAACAGATGGAAAGGAGGGTTGAGGATCTATCATGCACTAGTTGAGGAGTGCGAGGCACCAAAAGAGAAAAAATTATGA MEIGRSNPHHRAESNNIKMEGKNKFKIYPRGLDITWGNDNRYWMLSDMEAEDSFAELKQVNWLEVTGSTPKNLKIGAWFKVSFNVTLRPNAFGWDECNVYIMAKIGKKGHYSFKKLNLNVKQPEGRFNIPHNELKIKVAKPKNGSEEDLKLYFGMYEVWSNRWKGGLRIYHALVEECEAPKEKKL Homology
BLAST of CmaCh18G005520 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 5.1e-27 Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 0
BLAST of CmaCh18G005520 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 5.5e-05 Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 0
BLAST of CmaCh18G005520 vs. ExPASy TrEMBL
Match: A0A6J1K456 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490487 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 5.2e-107 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CmaCh18G005520 vs. ExPASy TrEMBL
Match: A0A6J1GSJ8 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456742 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 2.1e-76 Identity = 139/180 (77.22%), Postives = 154/180 (85.56%), Query Frame = 0
BLAST of CmaCh18G005520 vs. ExPASy TrEMBL
Match: A0A6J1GT48 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456742 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 5.2e-75 Identity = 139/182 (76.37%), Postives = 155/182 (85.16%), Query Frame = 0
BLAST of CmaCh18G005520 vs. ExPASy TrEMBL
Match: A0A0A0M0X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G709160 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 3.5e-47 Identity = 101/181 (55.80%), Postives = 132/181 (72.93%), Query Frame = 0
BLAST of CmaCh18G005520 vs. ExPASy TrEMBL
Match: A0A6J1CNK5 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012653 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45 Identity = 98/175 (56.00%), Postives = 121/175 (69.14%), Query Frame = 0
BLAST of CmaCh18G005520 vs. NCBI nr
Match: XP_022994899.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]) HSP 1 Score: 396.7 bits (1018), Expect = 1.1e-106 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CmaCh18G005520 vs. NCBI nr
Match: XP_022954490.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 295.0 bits (754), Expect = 4.4e-76 Identity = 139/180 (77.22%), Postives = 154/180 (85.56%), Query Frame = 0
BLAST of CmaCh18G005520 vs. NCBI nr
Match: XP_022954489.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74 Identity = 139/182 (76.37%), Postives = 155/182 (85.16%), Query Frame = 0
BLAST of CmaCh18G005520 vs. NCBI nr
Match: XP_023541319.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.7 bits (722), Expect = 2.2e-72 Identity = 134/179 (74.86%), Postives = 153/179 (85.47%), Query Frame = 0
BLAST of CmaCh18G005520 vs. NCBI nr
Match: KAG7012603.1 (Protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 273.9 bits (699), Expect = 1.0e-69 Identity = 132/179 (73.74%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of CmaCh18G005520 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 125.2 bits (313), Expect = 5.6e-29 Identity = 68/176 (38.64%), Postives = 103/176 (58.52%), Query Frame = 0
BLAST of CmaCh18G005520 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 122.5 bits (306), Expect = 3.6e-28 Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 0
BLAST of CmaCh18G005520 vs. TAIR 10
Match: AT4G19850.2 (lectin-related ) HSP 1 Score: 55.8 bits (133), Expect = 4.2e-08 Identity = 48/153 (31.37%), Postives = 74/153 (48.37%), Query Frame = 0
BLAST of CmaCh18G005520 vs. TAIR 10
Match: AT5G45080.1 (phloem protein 2-A6 ) HSP 1 Score: 45.1 bits (105), Expect = 7.3e-05 Identity = 27/73 (36.99%), Postives = 38/73 (52.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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