CmaCh18G003500 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G003500
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr18: 1879269 .. 1883193 (-)
RNA-Seq Expression	CmaCh18G003500
Synteny	CmaCh18G003500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACACCCTTTCTTTCTCTGTCTCTCTCTCTCTCTCTCTCTGTTTGGGGCCTATATTACAACTTCAGTACCTGCTCAAGTTCTTGATAACATCCAAAAGCCTCACTGCTCTGTGTCCCTCCCATTTTCTCTCCCTAATTCACCTACAATGACCTACAAAACCACCAGCCATGCCGAATCGCCCAAACTTCTCTGAAACTCTTCACCATCGCAATATGGGTGAGGAAAGCTATGGATGGTCCCCAACTGGGGCTCCTCTCGACGTCCAGAGACAGGACCACTGGAGGCACTTCGACAACTCCGTTGATGCTGTCTCTTTTGGTTTTGTTGCTACCGCCATTCTCGTCTCAATGTTCTTGCTTATGGCCATCTTTGAAAGGTTTTTGCGACCCACTCCCTCAGCTTTCTCTCACGACGGTGGCCGGAGGAGCCACCTTGGCCCTGAGGCCCAGATGGGTTTTGCTGCAAAGCTTGGCCACCCCTCGCCCAAAGTGAGTTTCCCCAATTTGTTCCTAATTCGTCTGCAGTTTTTAGAGTATGCTGTCTTTGGCAAATTTTTTTGAGGTGCTTCTTGTTCATTGTTGTTGGATTGTTGTATGTTCTATCTTTAGTTGGCTGTATGGGGATGCCATTGTTGCTCATTTGTGATGGCCCTTCTTCAAAATCCTTCTATATATCTCTCTGTTGTTCAAAGTTCTTGAAGTCTTGAATTCAAAATGGAAAAGTTCTCGTCCTGTACTTGTCAACTGAGACAACCCATGTTGTAGGACTTGATATCAGAACAACTTGCTTTGTGTCTATCTTTGTCTTTCCTTCCAAATTACAATTTTAAAGGGTACCTTGCAGTTTTGAAAGTTCAAGTTTATCTTGTAGTTCTTGCTTTCTTCCTGAATTCTGCAGTATTGTTTATGAGCACTGAGTTTTTATCACAGCACATTACTGTCTCCTAATTATGGACTCTAGGCAAGGACCGGGTAGTTGTTTTGTGTTTGGGCTGTTACAAATGGTATTAGAGTCAGACACCCGGCGATATGCCAATGAGGAGGGTGAGCCCCGAAGTGGTGGACACGAGTCGGTGTGCTAACAAGGATGCTGGACTCCGAAAGGGGGTGGATTGGCGAGTTCCCACATCGATTGGAGAAGAAACGAGTGCCAACGAGGACGCTAGGTCCTCGGGGGTGGATTGTGAGATCTCGGACAAAACATTCTTTATAAGAGTGTTGAAACCTCTCCCTAGCATACATGTTTTAGAAACCTTGAGGGGAAGCTTGAAAGGAAAAGTTCAAAGAGGACAATATGGGCTAGCGTAAGCTTTGGCACGTGGTCATTTGTATGGCCACTTTCCACCAAGTGCATTTAATGTTCTGCCTCACTAACTTACTCATCGAGTCAATCCCAATGCCTTCCATATCCCACATGGCCCTTCCATATCCCACATGGCCCTTATCTCTGTCATGGCTCGTTCATATTCTCAAACAATCAAGTTTGATAGACGAAATTTTTGAAATCTTACAACGTGATAAATGAAGAATGCCGACCAAATGTAACAACTCAAGTCTATGGCTAGCAAATATTATCTTCTTTAGGCTTTTCCTTGTGAGTTTCCCCTCAAAGTTTTTAAAACACGTCTATGTCTATTAAGGAGAGGTTTCCACATCCTTGATCTCACAATCCACCCCCTTCGGGACCCAATGTCCTTGCTAGCACATCGTCCGGTGTCTGGCTCTGATACCATTTGTGACAGCCCTACCCCACCGCTAGCATATATTGTCCTCTTTGAACTTTCCCTTTCTAGCTTTTCCTCAAGGTTTTTAAAATGCGTATGCTAAGGAAAGATTTTCACACCCTTATAAAGAAATACTTCGTTCAGCTCTTTAACCAACGTGGGATCTTACATAAACCTTGTTGATATGATACATTTCATAATTATTATCATGTGACCCCTCTTTAATCTATGGATACTTCTTGCAGCCTTCTAAGAAACATATAAGGCCTACCTAGTGGACCTGTCTAATTGCTCAATCACTGGGATTGATACGAGTAGGTATATGTTTTGGACACTAACAAGAACATAAAAAAGACATATTTGTATCTACCTAGAAGTTGTTAGAGTTGTGTGGATATAAATAGAGTCGGTTTGGGAGTTTGGGAGGTAGCTAGAATTTGGATAGTAGTTTTTGTGAGATCTCACATCTGTTAGACATGGAACGAAGCATTCTTTATGAGGGTATGGAAACCTCTCCCTAGTAGATGCATTTTAAAACTGTGAGGTTGACGTTAATATGTAACAGGCCAAATCAGATAATATTTACTAGCGGTGGGCTTGGGTTGTTACAAGAGCTAGTCACTGGATGGTGTGCCAGGGAGGACGCTGACCCCTGATGAGGGTGGATTTTGAGATCCCACATTGGTTGGAGAGAGAAAGGAAATATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATATGCGTTTTAAACCTGTGAGGCTGACGGTGATATGTAACGGGCCAAAGTGGACAATATTTGCTATCGGTGGGCTTGGGTTGCTACAAATGGTATTAGAGCCAATCACCAGACGGTGTGCCAGCGAAGACGGTGGCCCCCAAGGAGAGTGGATTGGAAAACAAAACATTCCTTATAAGGGTGTGAAAAACTCTTCCTAACAGACACGTTCGAACAATATCTATTATGAGTGGGTTTGGACTCTTACCGTTTTGGTTTTGGGTGAATCCACCTCTATTGCAGTGCTTTTATTTAGTTTCCATTTCAATTTATAGTTCCTACCAAAAACAAAACATTCAGATGGCAAAACATTTAGATCTATCTACCTTACCGACGAAGCTACGAGCAATGTATGAACTCGATCGTATGTGCACCCTTATACAAGTGCAAACTTGAGATTAGTTAGTCCATCTAGTGCATGCTTGGGAGTAGTTTTATAAGGGTCAAAATCACTTTTATCGTACCGTTTCTAATTATTTTGGATCGGACAGTAAGTGATTTTCGTCGTTCTAAATCACTCCTAAACATAAACATGTAGGTACTTCGCTACACTGAGCAGTGAGCACTACACTGTTGGCTGTCTTCTGAGTATGCTGGCTTTTTATGTCTTTAGCTTTGTGTATCACTTCATTTTTGTTGTGTTTATATGCAGATGACTGTGTATTCCTATGGAGTTTCAGTACTAATGCCTGGAGATCATATTCCAACCTACATTGCCCACCCGGCTCCCGTCCCGTGCCCCCCCGAACGAATTCCATGGCCACAGCTACAACAAAACACCATATCCTACGCCACCACCAGCTCCCATTTCACTGAAACTTCAAGCTCCTTATAAGCTCAAACAAACCAAGCATGAGAAAGAGGTTCCTTAGGTTCTTATTCTGTACATACCCTCACAACCCTCCTTCAAGGTAGCAAGTTTCACATTTTTATGCCTCCCACAAGGTTTAGCTTTTATCTCTTTCAAGGCTCTTGGCTTCATCCTCTCAGCAATCATATAGAAAATGTAAAATGGTTGTCGAACAAGCGAACTTCGAACGTCGAGATATGTATGAAATCCTTGAGCTTTGAATTCAAACTCTTGAGCTAAAATTCTCGTCTCTGCTAAAGATCAAAGAGTTCATAAACTCCCAAATGATAGATAACTCTTCACTGTATATTATTAAGCCAGAGAATCCAAGAAAATGACAGCATATACACAAAATCTTATAAAATGACAGCCATTTCTTCTCATAGATCTTGTCTGAATTCTCCAGTTTTGGACTTGCTCTGTTTTTTTGTCGGTTCATATACAGAAAAGCAAAAGTCAGACGCAATGTTAGAAGAATTGTTACTACCAATGGTGAAGAAAGTAAGTTAATGATGGTGATCGATCCTTCGTCTCCACTCGAACTCTGTTCTTCGATTCAGAAATCATCGCTGG

mRNA sequence

CCACACCCTTTCTTTCTCTGTCTCTCTCTCTCTCTCTCTCTGTTTGGGGCCTATATTACAACTTCAGTACCTGCTCAAGTTCTTGATAACATCCAAAAGCCTCACTGCTCTGTGTCCCTCCCATTTTCTCTCCCTAATTCACCTACAATGACCTACAAAACCACCAGCCATGCCGAATCGCCCAAACTTCTCTGAAACTCTTCACCATCGCAATATGGGTGAGGAAAGCTATGGATGGTCCCCAACTGGGGCTCCTCTCGACGTCCAGAGACAGGACCACTGGAGGCACTTCGACAACTCCGTTGATGCTGTCTCTTTTGGTTTTGTTGCTACCGCCATTCTCGTCTCAATGTTCTTGCTTATGGCCATCTTTGAAAGGTTTTTGCGACCCACTCCCTCAGCTTTCTCTCACGACGGTGGCCGGAGGAGCCACCTTGGCCCTGAGGCCCAGATGGGTTTTGCTGCAAAGCTTGGCCACCCCTCGCCCAAAATGACTGTGTATTCCTATGGAGTTTCAGTACTAATGCCTGGAGATCATATTCCAACCTACATTGCCCACCCGGCTCCCGTCCCGTGCCCCCCCGAACGAATTCCATGGCCACAGCTACAACAAAACACCATATCCTACGCCACCACCAGCTCCCATTTCACTGAAACTTCAAGCTCCTTATAAGCTCAAACAAACCAAGCATGAGAAAGAGGTTCCTTAGGTTCTTATTCTGTACATACCCTCACAACCCTCCTTCAAGGTAGCAAGTTTCACATTTTTATGCCTCCCACAAGGTTTAGCTTTTATCTCTTTCAAGGCTCTTGGCTTCATCCTCTCAGCAATCATATAGAAAATGTAAAATGGTTGTCGAACAAGCGAACTTCGAACGTCGAGATATGTATGAAATCCTTGAGCTTTGAATTCAAACTCTTGAGCTAAAATTCTCGTCTCTGCTAAAGATCAAAGAGTTCATAAACTCCCAAATGATAGATAACTCTTCACTGTATATTATTAAGCCAGAGAATCCAAGAAAATGACAGCATATACACAAAATCTTATAAAATGACAGCCATTTCTTCTCATAGATCTTGTCTGAATTCTCCAGTTTTGGACTTGCTCTGTTTTTTTGTCGGTTCATATACAGAAAAGCAAAAGTCAGACGCAATGTTAGAAGAATTGTTACTACCAATGGTGAAGAAAGTAAGTTAATGATGGTGATCGATCCTTCGTCTCCACTCGAACTCTGTTCTTCGATTCAGAAATCATCGCTGG

Coding sequence (CDS)

ATGCCGAATCGCCCAAACTTCTCTGAAACTCTTCACCATCGCAATATGGGTGAGGAAAGCTATGGATGGTCCCCAACTGGGGCTCCTCTCGACGTCCAGAGACAGGACCACTGGAGGCACTTCGACAACTCCGTTGATGCTGTCTCTTTTGGTTTTGTTGCTACCGCCATTCTCGTCTCAATGTTCTTGCTTATGGCCATCTTTGAAAGGTTTTTGCGACCCACTCCCTCAGCTTTCTCTCACGACGGTGGCCGGAGGAGCCACCTTGGCCCTGAGGCCCAGATGGGTTTTGCTGCAAAGCTTGGCCACCCCTCGCCCAAAATGACTGTGTATTCCTATGGAGTTTCAGTACTAATGCCTGGAGATCATATTCCAACCTACATTGCCCACCCGGCTCCCGTCCCGTGCCCCCCCGAACGAATTCCATGGCCACAGCTACAACAAAACACCATATCCTACGCCACCACCAGCTCCCATTTCACTGAAACTTCAAGCTCCTTATAA

Protein sequence

MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL

Homology

[Close]

BLAST of CmaCh18G003500 vs. ExPASy TrEMBL
Match: A0A6J1JVY8 (uncharacterized protein LOC111490191 OS=Cucurbita maxima OX=3661 GN=LOC111490191 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 6.5e-93
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL
Sbjct: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 167

[Close]

BLAST of CmaCh18G003500 vs. ExPASy TrEMBL
Match: A0A6J1GTZ3 (uncharacterized protein LOC111456916 OS=Cucurbita moschata OX=3662 GN=LOC111456916 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.6e-91
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           MPNRPNFSETL HRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MPNRPNFSETLRHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTPSAFSHDGGRRSHL PEAQMGFAAKLGHPSPKMTVYSYGVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLDPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL
Sbjct: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 167

[Close]

BLAST of CmaCh18G003500 vs. ExPASy TrEMBL
Match: A0A6J1KM25 (uncharacterized protein LOC111495798 OS=Cucurbita maxima OX=3661 GN=LOC111495798 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.3e-76
Identity = 146/167 (87.43%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           M  R N SET  H NMGEE YGWSPTGAPLDVQR+DHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MSERGNSSETFGH-NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTP+AFSH  GRR+HL PEAQMGFA KLGHPSPKMTVYS GVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPTAFSH-AGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPVPCPPERIPWPQ Q N +SYATTSSHFTE SSSL
Sbjct: 121 GDHIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHFTENSSSL 165

[Close]

BLAST of CmaCh18G003500 vs. ExPASy TrEMBL
Match: A0A6J1EI19 (uncharacterized protein LOC111434363 OS=Cucurbita moschata OX=3662 GN=LOC111434363 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.0e-74
Identity = 144/167 (86.23%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           M  R N SET    NMGEE YGWSPTGAPLDVQR+DHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MSERGNSSETFGD-NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTP+AFSH  GRR+HL PEAQMGFA KLGHPSPKMTVYS GVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPTAFSH-AGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPV CPPERIPWPQ Q N +SYATTSSHFTE SSSL
Sbjct: 121 GDHIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL 165

[Close]

BLAST of CmaCh18G003500 vs. ExPASy TrEMBL
Match: A0A6J1CF31 (uncharacterized protein LOC111010664 OS=Momordica charantia OX=3673 GN=LOC111010664 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.7e-72
Identity = 139/167 (83.23%), Postives = 145/167 (86.83%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           M  R NFSET  H +MGEE YGWSP GAPLD+ R+DHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MSKRGNFSETFRH-HMGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFL+MAIFERFLRP P+AFSH  G RSHL PEAQ+ FA KLGHPSPKMTVYS GVSVLMP
Sbjct: 61  MFLVMAIFERFLRPAPTAFSHTAG-RSHLDPEAQVRFAGKLGHPSPKMTVYSCGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPVPCPPERIPWPQ Q NT SYATTSSH TE SSSL
Sbjct: 121 GDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL 165

[Close]

BLAST of CmaCh18G003500 vs. NCBI nr
Match: XP_022994482.1 (uncharacterized protein LOC111490191 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 1.3e-92
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL
Sbjct: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 167

[Close]

BLAST of CmaCh18G003500 vs. NCBI nr
Match: XP_022954759.1 (uncharacterized protein LOC111456916 [Cucurbita moschata])

HSP 1 Score: 344.0 bits (881), Expect = 7.4e-91
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           MPNRPNFSETL HRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MPNRPNFSETLRHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTPSAFSHDGGRRSHL PEAQMGFAAKLGHPSPKMTVYSYGVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLDPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL
Sbjct: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 167

[Close]

BLAST of CmaCh18G003500 vs. NCBI nr
Match: KAG7012413.1 (hypothetical protein SDJN02_25165, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           MPNRPNFSET+ HRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MPNRPNFSETIRHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTPSAFSHDGGRRSHL PEAQMGFAAKLGHPSPKMTVYSYGVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLDPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL
Sbjct: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 167

[Close]

BLAST of CmaCh18G003500 vs. NCBI nr
Match: XP_023542789.1 (uncharacterized protein LOC111802594 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTPSAFSHDGGRRSHL PEAQMGFAAKLGHPSPKMTVYSYGVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLDPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIAHPAPVP PPERIPWPQLQQNTISYATTSSHFTETSSSL
Sbjct: 121 GDHIPTYIAHPAPVPSPPERIPWPQLQQNTISYATTSSHFTETSSSL 167

[Close]

BLAST of CmaCh18G003500 vs. NCBI nr
Match: KAG6573242.1 (hypothetical protein SDJN03_27129, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337.8 bits (865), Expect = 5.3e-89
Identity = 162/167 (97.01%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MPNRPNFSETLHHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60
           MPNRPNFSET+ HRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS
Sbjct: 1   MPNRPNFSETIRHRNMGEESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVS 60

Query: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120
           MFLLMAIFERFLRPTPSAFSHDGGRRSHL PEAQMGFAAKLGHPSPKMTVYSYGVSVLMP
Sbjct: 61  MFLLMAIFERFLRPTPSAFSHDGGRRSHLDPEAQMGFAAKLGHPSPKMTVYSYGVSVLMP 120

Query: 121 GDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTETSSSL 168
           GDHIPTYIA PAPVPCPPERIPWPQ QQNTISYATTSSHFTETSSSL
Sbjct: 121 GDHIPTYIARPAPVPCPPERIPWPQQQQNTISYATTSSHFTETSSSL 167

[Close]

BLAST of CmaCh18G003500 vs. TAIR 10
Match: AT1G11120.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 5.0e-37
Identity = 79/149 (53.02%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 20  SYGWSPTGAPLDVQRQDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPSA 79
           ++ W P GAP++++R++ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R T ++
Sbjct: 12  NHQWPPIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTS 71

Query: 80  FSHDGGRRSHL--GPEAQMGF---AAKLGHPSPKMTVYSYGVSVLMPGDHIPTYIAHPAP 139
            ++     S +  G ++++GF   A KLG+ SPKMTVYS GVSVLMPGD IPT+IAHPAP
Sbjct: 72  TTNSDSSSSRVLPGMDSRVGFNGAATKLGYQSPKMTVYSNGVSVLMPGDDIPTFIAHPAP 131

Query: 140 VPCPPERIPWPQLQQNTISYATTSSHFTE 163
           VPCPP+ I   Q Q  +   +++S+   E
Sbjct: 132 VPCPPQNISQSQHQHGSSKDSSSSNSIQE 160

[Close]

BLAST of CmaCh18G003500 vs. TAIR 10
Match: AT1G11120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 137.5 bits (345), Expect = 9.8e-33
Identity = 79/175 (45.14%), Postives = 110/175 (62.86%), Query Frame = 0


Query: 20  SYGWSPTGAPLDVQRQDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPSA 79
           ++ W P GAP++++R++ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R T ++
Sbjct: 12  NHQWPPIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTS 71

Query: 80  FSHDGGRRSHL--GPEAQMGF---AAKLGHPSPK-------------------------- 139
            ++     S +  G ++++GF   A KLG+ SPK                          
Sbjct: 72  TTNSDSSSSRVLPGMDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILR 131

Query: 140 MTVYSYGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQLQQNTISYATTSSHFTE 163
           MTVYS GVSVLMPGD IPT+IAHPAPVPCPP+ I   Q Q  +   +++S+   E
Sbjct: 132 MTVYSNGVSVLMPGDDIPTFIAHPAPVPCPPQNISQSQHQHGSSKDSSSSNSIQE 186

[Close]

BLAST of CmaCh18G003500 vs. TAIR 10
Match: AT1G09812.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58007.2); Has 93 Blast hits to 93 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-17
Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 19  ESYGWSPTGAPLDVQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPSA 78
           +S  WS   +P +   +  WR    S++A+SFGFVATAIL+SMFL+MAIFE   RP  S+
Sbjct: 3   KSSSWS-IYSPREGDSEGPWRS-STSMNAISFGFVATAILISMFLIMAIFEHLFRPENSS 62

Query: 79  FS--HDGGRRSHLGPEAQMGFAAKLGHPSPKMTVYSYGVSVLMPGDHIPTYIAHPAPVPC 138
           F   H   +R   G  +Q    A      P  TV    VSV+MPG+ +P++IA PAP+PC
Sbjct: 63  FDSPHQIRQRQRDG-SSQFQKLADQASMVPVSTVVD--VSVVMPGEKLPSHIALPAPLPC 122

Query: 139 PPERIPWP 145
             E I WP
Sbjct: 123 RREGIHWP 125

[Close]

BLAST of CmaCh18G003500 vs. TAIR 10
Match: AT1G58007.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 91 Blast hits to 91 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 4.6e-14
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 43  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLG 102
           +S++A+SFGFVATAIL+ MF++MAI E   R   S+ S+D    S            KL 
Sbjct: 21  SSMNAISFGFVATAILILMFIIMAILEHLFRSDHSS-SYDVDDSSQF---------QKLA 80

Query: 103 HPSPKMTVYSYGVSVLMPGDHIPTYIAHPAPVPCPPERIPWP 145
             +  + V +  VSV+MPGD +P+Y+A PAP PC  E I WP
Sbjct: 81  EKASMVPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWP 112

[Close]

BLAST of CmaCh18G003500 vs. TAIR 10
Match: AT1G58007.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 4.6e-14
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 43  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPSAFSHDGGRRSHLGPEAQMGFAAKLG 102
           +S++A+SFGFVATAIL+ MF++MAI E   R   S+ S+D    S            KL 
Sbjct: 21  SSMNAISFGFVATAILILMFIIMAILEHLFRSDHSS-SYDVDDSSQF---------QKLA 80

Query: 103 HPSPKMTVYSYGVSVLMPGDHIPTYIAHPAPVPCPPERIPWP 145
             +  + V +  VSV+MPGD +P+Y+A PAP PC  E I WP
Sbjct: 81  EKASMVPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWP 112

The following BLAST results are available for this feature:

BLAST of CmaCh18G003500 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh18G003500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVY8	6.5e-93	100.00	uncharacterized protein LOC111490191 OS=Cucurbita maxima OX=3661 GN=LOC111490191...	[more]
A0A6J1GTZ3	3.6e-91	98.80	uncharacterized protein LOC111456916 OS=Cucurbita moschata OX=3662 GN=LOC1114569...	[more]
A0A6J1KM25	4.3e-76	87.43	uncharacterized protein LOC111495798 OS=Cucurbita maxima OX=3661 GN=LOC111495798...	[more]
A0A6J1EI19	4.0e-74	86.23	uncharacterized protein LOC111434363 OS=Cucurbita moschata OX=3662 GN=LOC1114343...	[more]
A0A6J1CF31	3.7e-72	83.23	uncharacterized protein LOC111010664 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of CmaCh18G003500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022994482.1	1.3e-92	100.00	uncharacterized protein LOC111490191 [Cucurbita maxima]	[more]
XP_022954759.1	7.4e-91	98.80	uncharacterized protein LOC111456916 [Cucurbita moschata]	[more]
KAG7012413.1	1.3e-90	98.20	hypothetical protein SDJN02_25165, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023542789.1	1.3e-90	98.80	uncharacterized protein LOC111802594 [Cucurbita pepo subsp. pepo]	[more]
KAG6573242.1	5.3e-89	97.01	hypothetical protein SDJN03_27129, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh18G003500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11120.2	5.0e-37	53.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G11120.1	9.8e-33	45.14	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G09812.1	2.6e-17	44.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G58007.1	4.6e-14	44.12	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G58007.2	4.6e-14	44.12	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33728	CTTNBP 2 AMINO-TERMINAL-LIKE PROTEIN	coord: 19..154
None	No IPR available	PANTHER	PTHR33728:SF1	SUBFAMILY NOT NAMED	coord: 19..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G003500.1	CmaCh18G003500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane