CmaCh18G003260 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G003260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	thioredoxin-like protein CXXS1
Location	Cma_Chr18: 1747321 .. 1749105 (-)
RNA-Seq Expression	CmaCh18G003260
Synteny	CmaCh18G003260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGCAAGAGCAGTGGCGACAGATTAGGGTTGTGAAGATCGAATCCATGGAATCGTGGAATTCCTTTGTGACTAAAGCTGCTCAGCAAGACTCTCTTGTATGTTCCCTTCTTCAACTTCATTTCCTTTGTCTCGATTTTTGAATGGTTTCTTAATGTTGAGATTTGATCTATTTTGATGGGAGATTGGTTTGTGAGTTCTTGGTTTTCGTTTATCTCTGTGGTTTTTGTAGATTGTTGTGCACTTCACTGCTTCTTGGTGCATGCCTTCTGTTGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAATTACCCAGATGCTCTGTTTCTCACTGTTGATGTTGATGAGGTTAAGGTAATAAGTCTAATTCCAATGTCCAAAATCATGATAAATGTGGTAGCAGTTTTTGAAGAGTATGGTACATTTTGCTGAAGAACAGATTATGTCATTGCTTCTATCTAAAAACTTATATCAGACTTCTTCATTCCATCAAGTTTCTTCAAGTCAATGTGTCATAAGTTCGTTGTTTTGGTTCTATAATTCAAATGATTATGGTTTCAAAATGAGTAATCAGAAACACATTTGGTGTAGATTGAGGTTGGAAGTTCATTATCTTTGAAAACTTCCAACTAGCTCATAACCCACATTCAGCTTCTTTCTTCTTCATCAAAGCCATAAAAGCACTCATAAATGGCAAATATCAGATCAGTGATTCATCCTTTATCAAACAATCATGAACTCATAAAAGGGCAGTATATTTGTGCAAAGTCGGAGAAAAATTCGATCCAAACTTGGGAAAGATACCACATGTTATGTGATATCCCACATCGGTTGGGAGGAGAACGAAACATTCTTTATAAGGGGTGGAAACTCTCCCTAATAGATGCGTTTTAATACCAATACCTTGAGGGGGCTGGACACTGGGAGGTGTGCTAGCGAGGACGCTGAGCCTCTAAGGTGGGTAGACACCAGGCGGTGTGCCAGTGAGGATGCTGAGCCCTGAAGGGGGTGGACACCAGACGGTGTGCTGGTAAGGATGTTGGGCCTTGAATGAGGGTGGATTATGAGATTCCACCTCGATTGAGGAGGGGAACGACATCGATTGAAGAGGAGAACGAGTGCCAGTGAGGACGAGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGAAGGAGAACGAAGAATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTTAAGTCTGAAAGAGAAAGTCCAAAGAGGGACAATATGTGTCAGCGGTTGGCTTGGGCTGTTACCTTTAGGGATGACTTTCACAGTGACTTGCTATTATCCCTCATGTTCCCCTTTCTTGACTGTCCTTCTACATGTGTGGCCAAAAAAGCCCCTTCCCAACCGCTTCTCCAAGCTAACTTGTTCCTAAATGCTTCGGAAACCCAAAGCTCTTGTCAAAACCAGGCCATGGAACAGATGCCTCATACGGTTTCACTGTGTTGTATCGTCTCGCTAGTTGAAACCGATGCCTCATAAATGGAAAATATCAGATGGAACCGTTCTTTATCGTCCCCTGATTCACATCCTGAGAGAGATAACAAAATAACTTCTTTGTGATTTTCTTGTTTTCATGATAGGAAGTGGCTGCTAAAATGGAGATAAAGGCAATGCCAACATTCTTGCTGATGAAGAATGGTACTCAAATTGGGAAGCTCGTGGGTGCAAATCCAGAAGAGGTAAGGAAAATGATAGACGCAAATGTTGAGACCATACATGTTGCATAA

mRNA sequence

ATGGAGGGGCAAGAGCAGTGGCGACAGATTAGGGTTGTGAAGATCGAATCCATGGAATCGTGGAATTCCTTTGTGACTAAAGCTGCTCAGCAAGACTCTCTTATTGTTGTGCACTTCACTGCTTCTTGGTGCATGCCTTCTGTTGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAATTACCCAGATGCTCTGTTTCTCACTGTTGATGTTGATGAGGTTAAGGAAGTGGCTGCTAAAATGGAGATAAAGGCAATGCCAACATTCTTGCTGATGAAGAATGGTACTCAAATTGGGAAGCTCGTGGGTGCAAATCCAGAAGAGGTAAGGAAAATGATAGACGCAAATGTTGAGACCATACATGTTGCATAA

Coding sequence (CDS)

ATGGAGGGGCAAGAGCAGTGGCGACAGATTAGGGTTGTGAAGATCGAATCCATGGAATCGTGGAATTCCTTTGTGACTAAAGCTGCTCAGCAAGACTCTCTTATTGTTGTGCACTTCACTGCTTCTTGGTGCATGCCTTCTGTTGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAATTACCCAGATGCTCTGTTTCTCACTGTTGATGTTGATGAGGTTAAGGAAGTGGCTGCTAAAATGGAGATAAAGGCAATGCCAACATTCTTGCTGATGAAGAATGGTACTCAAATTGGGAAGCTCGTGGGTGCAAATCCAGAAGAGGTAAGGAAAATGATAGACGCAAATGTTGAGACCATACATGTTGCATAA

Protein sequence

MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETIHVA

Homology

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BLAST of CmaCh18G003260 vs. ExPASy Swiss-Prot
Match: Q8LDI5 (Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 2.3e-36
Identity = 73/116 (62.93%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           RVVKI+S ESWN +V++A  Q+  IV HFTA WC+PSV MN FFEELAFNY DALFL VD
Sbjct: 3   RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVD 62

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVET---IHVA 124
           VDEVKEVA+++E+KAMPTFL +K+G  + KLVGANP+E++K +D  V++   +H+A
Sbjct: 63  VDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVDGFVQSSRVVHIA 118

[Close]

BLAST of CmaCh18G003260 vs. ExPASy Swiss-Prot
Match: Q0J9V5 (Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0629500 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.0e-28
Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           +VVK+E  ESW+ FV +A+ +   +V HF ASWC+ S++MN  FEELA  +P+ LFL VD
Sbjct: 13  KVVKVEKEESWDLFVNQASNEGHPVVAHFGASWCVTSLSMNYKFEELAQTHPEILFLYVD 72

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETIHV 123
           VD+V+ V++K+ +KAMPTF L+K+   + K+VGANP+EV+KM+DA+ E+  V
Sbjct: 73  VDDVQSVSSKLGVKAMPTFFLIKDKEVVNKIVGANPDEVKKMVDASAESFGV 124

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BLAST of CmaCh18G003260 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-19
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           +V+   ++E+WN  + KA +  +L+VV FTASWC P   + PFF +LA   P+ LFL VD
Sbjct: 7   QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 66

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMI 114
            DE+K VA+   I+AMPTF+ +K G  + K+VGA  +E++  I
Sbjct: 67  TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of CmaCh18G003260 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-19
Identity = 43/106 (40.57%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 15  IESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEV 74
           I + ESW+  + +A +   ++V +F+A+WC P   + PFF EL+  +   +FL VDVDE+
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDEL 87

Query: 75  KEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 121
            + ++  +IKA PTF  +KNG QIGKLVGAN  E++K + + ++++
Sbjct: 88  SDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSV 133

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BLAST of CmaCh18G003260 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.4e-19
Identity = 41/106 (38.68%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 15  IESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEV 74
           I + E W+  +++A++   +++ +F+A WC P   + P++ EL+ NYP  +FL +DVDE+
Sbjct: 29  ITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDEL 88

Query: 75  KEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 121
            + +A  EIKA PTF  +++G Q+ KLVGAN  E+ K I A ++++
Sbjct: 89  SDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAILDSL 134

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BLAST of CmaCh18G003260 vs. ExPASy TrEMBL
Match: A0A6J1JW03 (thioredoxin-like protein CXXS1 OS=Cucurbita maxima OX=3661 GN=LOC111490202 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.5e-62
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN
Sbjct: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI
Sbjct: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. ExPASy TrEMBL
Match: A0A6J1GTK2 (thioredoxin-like protein CXXS1 OS=Cucurbita moschata OX=3662 GN=LOC111456843 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.5e-62
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN
Sbjct: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI
Sbjct: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. ExPASy TrEMBL
Match: A0A5A7UTN6 (Thioredoxin-like protein CXXS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006200 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52
Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+QWR+ RVVKIESMESWN ++TKA QQDSLIVVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWRRTRVVKIESMESWNFYLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVDEVKEVAAK+EIKAMPTFL+MKNGTQI KLVGANPEE+RK I A  ET+
Sbjct: 61  YPDVLFLTVDVDEVKEVAAKLEIKAMPTFLMMKNGTQIDKLVGANPEEIRKRIGAYTETV 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. ExPASy TrEMBL
Match: A0A1S3B3B5 (thioredoxin-like protein CXXS1 OS=Cucumis melo OX=3656 GN=LOC103485681 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52
Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+QWR+ RVVKIESMESWN ++TKA QQDSLIVVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWRRTRVVKIESMESWNFYLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVDEVKEVAAK+EIKAMPTFL+MKNGTQI KLVGANPEE+RK I A  ET+
Sbjct: 61  YPDVLFLTVDVDEVKEVAAKLEIKAMPTFLMMKNGTQIDKLVGANPEEIRKRIGAYTETV 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. ExPASy TrEMBL
Match: A0A0A0LUX0 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G065970 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.9e-49
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+QW++ RVVKIESMESWN  +TKA QQDSLIVVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWQRTRVVKIESMESWNFNLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVDEVKEVAAK+EIKAMPTFL+MKNG  I KLVGANPEE+RK I A  ET+
Sbjct: 61  YPDVLFLTVDVDEVKEVAAKLEIKAMPTFLVMKNGNLIDKLVGANPEEIRKRIGAYTETV 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: XP_022954644.1 (thioredoxin-like protein CXXS1 [Cucurbita moschata] >XP_022994497.1 thioredoxin-like protein CXXS1 [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 1.5e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN
Sbjct: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI
Sbjct: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: XP_023542798.1 (thioredoxin-like protein CXXS1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023542799.1 thioredoxin-like protein CXXS1 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573217.1 Thioredoxin-like protein CXXS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQWRQIRVVKIESMESWNSFVTKAAQQ SLIVVHFTASWCMPSVAMNPFFEELAFN
Sbjct: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQGSLIVVHFTASWCMPSVAMNPFFEELAFN 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI
Sbjct: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: XP_008441601.1 (PREDICTED: thioredoxin-like protein CXXS1 [Cucumis melo] >KAA0056899.1 thioredoxin-like protein CXXS1 [Cucumis melo var. makuwa] >TYJ99402.1 thioredoxin-like protein CXXS1 [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52
Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+QWR+ RVVKIESMESWN ++TKA QQDSLIVVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWRRTRVVKIESMESWNFYLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVDEVKEVAAK+EIKAMPTFL+MKNGTQI KLVGANPEE+RK I A  ET+
Sbjct: 61  YPDVLFLTVDVDEVKEVAAKLEIKAMPTFLMMKNGTQIDKLVGANPEEIRKRIGAYTETV 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: XP_038895316.1 (thioredoxin-like protein CXXS1 [Benincasa hispida])

HSP 1 Score: 211.1 bits (536), Expect = 5.5e-51
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 1   MEG-QEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAF 60
           MEG QEQWRQIRVV IESMESWN ++TKA  QDSL+VVHFTASWCMPSVAMNPFFEELAF
Sbjct: 1   MEGQQEQWRQIRVVNIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAF 60

Query: 61  NYPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVET 120
           NYPD LFL+VDVDEVKEVAAK+EIKAMPTFL+MKNGTQI KLVGANPEE+RK I A  E 
Sbjct: 61  NYPDVLFLSVDVDEVKEVAAKLEIKAMPTFLVMKNGTQIDKLVGANPEEIRKRIGAYAEA 120

Query: 121 IHVA 124
           IHVA
Sbjct: 121 IHVA 124

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: XP_004145093.1 (thioredoxin-like protein CXXS1 [Cucumis sativus] >KGN64577.1 hypothetical protein Csa_013732 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 4.0e-49
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+QW++ RVVKIESMESWN  +TKA QQDSLIVVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWQRTRVVKIESMESWNFNLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVDEVKEVAAK+EIKAMPTFL+MKNG  I KLVGANPEE+RK I A  ET+
Sbjct: 61  YPDVLFLTVDVDEVKEVAAKLEIKAMPTFLVMKNGNLIDKLVGANPEEIRKRIGAYTETV 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. TAIR 10
Match: AT1G11530.1 (C-terminal cysteine residue is changed to a serine 1 )

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-37
Identity = 73/116 (62.93%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           RVVKI+S ESWN +V++A  Q+  IV HFTA WC+PSV MN FFEELAFNY DALFL VD
Sbjct: 3   RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVD 62

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVET---IHVA 124
           VDEVKEVA+++E+KAMPTFL +K+G  + KLVGANP+E++K +D  V++   +H+A
Sbjct: 63  VDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVDGFVQSSRVVHIA 118

[Close]

BLAST of CmaCh18G003260 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-20
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           +V+   ++E+WN  + KA +  +L+VV FTASWC P   + PFF +LA   P+ LFL VD
Sbjct: 7   QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 66

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMI 114
            DE+K VA+   I+AMPTF+ +K G  + K+VGA  +E++  I
Sbjct: 67  TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of CmaCh18G003260 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-20
Identity = 43/106 (40.57%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 15  IESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEV 74
           I + ESW+  + +A +   ++V +F+A+WC P   + PFF EL+  +   +FL VDVDE+
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDEL 87

Query: 75  KEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 121
            + ++  +IKA PTF  +KNG QIGKLVGAN  E++K + + ++++
Sbjct: 88  SDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSV 133

[Close]

BLAST of CmaCh18G003260 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-20
Identity = 43/106 (40.57%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 15  IESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEV 74
           I + ESW+  + +A +   ++V +F+A+WC P   + PFF EL+  +   +FL VDVDE+
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDEL 87

Query: 75  KEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 121
            + ++  +IKA PTF  +KNG QIGKLVGAN  E++K + + ++++
Sbjct: 88  SDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSV 133

[Close]

BLAST of CmaCh18G003260 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 88.2 bits (217), Expect = 5.0e-18
Identity = 40/102 (39.22%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 12  VVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDV 71
           V+   ++E WN  V  A +   LIV+ FTASWC P   + P F E+A  + + +F  +DV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 72  DEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMI 114
           DE++ VA + +++AMPTF+ MK G  I ++VGA  +E+ + +
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

The following BLAST results are available for this feature:

BLAST of CmaCh18G003260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDI5	2.3e-36	62.93	Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=...	[more]
Q0J9V5	4.0e-28	51.79	Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g...	[more]
P29448	2.0e-19	44.66	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q9C9Y6	2.0e-19	40.57	Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1	[more]
P85801	4.4e-19	38.68	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]

BLAST of CmaCh18G003260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JW03	7.5e-62	100.00	thioredoxin-like protein CXXS1 OS=Cucurbita maxima OX=3661 GN=LOC111490202 PE=4 ...	[more]
A0A6J1GTK2	7.5e-62	100.00	thioredoxin-like protein CXXS1 OS=Cucurbita moschata OX=3662 GN=LOC111456843 PE=...	[more]
A0A5A7UTN6	4.1e-52	84.55	Thioredoxin-like protein CXXS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B3B5	4.1e-52	84.55	thioredoxin-like protein CXXS1 OS=Cucumis melo OX=3656 GN=LOC103485681 PE=4 SV=1	[more]
A0A0A0LUX0	1.9e-49	82.11	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G065970...	[more]

BLAST of CmaCh18G003260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954644.1	1.5e-61	100.00	thioredoxin-like protein CXXS1 [Cucurbita moschata] >XP_022994497.1 thioredoxin-...	[more]
XP_023542798.1	1.0e-60	99.19	thioredoxin-like protein CXXS1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_02354...	[more]
XP_008441601.1	8.5e-52	84.55	PREDICTED: thioredoxin-like protein CXXS1 [Cucumis melo] >KAA0056899.1 thioredox...	[more]
XP_038895316.1	5.5e-51	84.68	thioredoxin-like protein CXXS1 [Benincasa hispida]	[more]
XP_004145093.1	4.0e-49	82.11	thioredoxin-like protein CXXS1 [Cucumis sativus] >KGN64577.1 hypothetical protei...	[more]

BLAST of CmaCh18G003260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11530.1	1.7e-37	62.93	C-terminal cysteine residue is changed to a serine 1	[more]
AT3G51030.1	1.4e-20	44.66	thioredoxin H-type 1	[more]
AT3G08710.1	1.4e-20	40.57	thioredoxin H-type 9	[more]
AT3G08710.2	1.4e-20	40.57	thioredoxin H-type 9	[more]
AT1G45145.1	5.0e-18	39.22	thioredoxin H-type 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 17..114 e-value: 4.9E-22 score: 77.9
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..118 score: 11.892923
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..121 e-value: 1.7E-33 score: 117.1
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..121
None	No IPR available	PANTHER	PTHR10438:SF433	THIOREDOXIN-LIKE PROTEIN CXXS1	coord: 1..121
None	No IPR available	CDD	cd02947	TRX_family	coord: 19..114 e-value: 1.79595E-30 score: 102.636
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 5..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G003260.1	CmaCh18G003260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003756	protein disulfide isomerase activity