CmaCh18G002500 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G002500
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	polyadenylate-binding protein RBP45-like
Location	Cma_Chr18: 1323731 .. 1332799 (+)
RNA-Seq Expression	CmaCh18G002500
Synteny	CmaCh18G002500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGCCCTTTCCTTCTGGCTTCTCTTTCGCTCGCGGCTTGCCTGCTTCAGACTGCTAGGGTTAGGGTTTCTCCGATATCAACGAGATCCCCAAATTCCCCACATTTAACCAAATTCTTTCGTTGAACCGACGATGCAGCCTGCTCCTGGTGTTGCCCTTCACAACATGCCTCACCAAGCTCCTCAGTACCAGCAACAGCAACCTCCTTACATGATGATGCCGCCTCAAGCACAGCCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGTTTCGCCTCAGGGCCAACCGCCTCAACCAGCTAACGCCGATGAGGTCCGTACGCTCTGGATCGGTGACTTGCAGTATTGGATGGACGAAAACTATCTCTTCAATTGCTTTGCTCATACAGGCGAGGTATGTTAAAGAACGCCTCACCTCCCCTATTTGAGATCATGCGTGCATGCTTTATTTTTCTTCTTTGTTAGCGGAAGATGTTGGAGTTTCTTGTATTATTATTAATTGGATTCTATGAAGATTTGTGGGAACGTTTGTTATTGCAATGTAATCTTTGTGGATAAGAATTGGATACAATTTTTGTTTTTAATTTCATATATAGAACTAATGAGGTTTGTATCCCCAGGTTTCCTCCGTGAAAGTTATTCGGAATAAGCAAACTGGCCAGTCCGAGGGCTATGGCTTTATTGAGTTTTTAACGCGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAACGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGAGAAAAGCGACAGGACGACTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCGCGTTATACCTCCCTTAAGGGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTTAAGTTCGGAGACGAGACGGAGCAAATGCGGGCAATGACTGAGATGAACGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCCGCTAACAAGAACACTTCTGGCGGTCAGCAATATGCGAAAAGTAAATACCACTCTACCCCCCAAAGGGGAAATTTTCTTTTTTTCTTTTTTTTTTTTAATGAAAGACAGAAGTTCGATTTTCTATGGAGTACATTCTGCACTATTCACTCATTGTATGTTTCCGACTGTGTTTGGAGCTTGGGTCTGCATCATGCTTTCAATATGTCAAGATGAATTCCACCTTCTTTATTTTCTGTTGGACTCTTCTCCTCTCCGTTACTTTTATTTTTTAGTTTCCTAGCATTTAAATTTCCCTCTCGTTATACCTTGGAAGAATAGTAGCCTTTCATGCCTTTTCCTTCAGTGTACTTCCAATTCGAGCTTTGGTCACTGTAACTACTATAAAAAAGATTCGTAAACTTATAGAACTCCTCTTTTCTCTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAGTACGTTGTTCCATTTAGGTCAGTTTTTTTCCCGCAAATGTCTTACCCTTTACTTTCTATGTAGCATATTTATGCTACGTTTTTTAATTCACCATTAGTTCTGCAACGTTGAGTTTTTCCTTTCATTTGCATAGGTATTTTTTTTTAACTGTCCCAGGCATTTTTTCACTATGGCTAACTCCATTAGTTTTTTTTTTTTTTTTTTCCAAGTTTAGGTCACTTAGGTTCTTTAGCTAGATGAATTATCGAAATTTCCAATAACTGGGATAGCAGGCTAGTTTGATTCTGAACTTTCCTTCTACAACAGCTGCAGCAGGCCGCATAGGCTGTGCTTGTTCTTCACCTCCTAGTATTTAGGGTTTATGGGATTTACTTTCCTATGTTTTCATCTCAGTATGTGGTGGTTGGGTTCCATATACTTAGACGAATCCACTACTTACCAAAGAATTTTGATACGTTTCTCGATCTGCATGGATCCTCATTTCTTATTAGCTTTTCATTCTGTGGCTTGATACTTTGTATTGATATTGTTTGGAATATTCTCTTCTTATTTCATTGTATTGAACTTATTTAATTTCAGGTATACTTTGTATGTGCCTCTTATGTGAATAGGATTCTATTCATTGATCTTCACTGATTTAATAGGTGGCTACCTTAACCTCCTGTAGTTTTTTAGTGGGCAGGATTTTCAATATGGCATAATAGGGTTGCCTCGAGTCAAAAGTTAGGGAGGTTATTTGTGATATTTAGTTCTTTAGGTTGTGAAGCTTCATAATATCCCCTTTTTTTTGTATTACTCGTGTATTATTCCATGGATTTTTTCTCATCTTCTGTGGGCATAATATGGAACACTTTATTTCCTATTTTGCATTCATTATGTTCGGTATGCATGTCTTCTTTTCTTTATATTTTGGCCTTCATTTGAATGTTTTTGCAAGTACAATGCTTACATCTCTTGTCAAATAAAAGAAGGCCTATGCTTTTAATGACAGAGGCTTGCGCCTCTGTGTTTCTGCCTGTGTTTTAGTACATGCAAGCCTCAGTGAAAGGTAGGTGTAAGACTAATTAATTAAAGCAATTTTAAGATGTGGGATGTGTTCTACTTCCAATTAAATAATGTTTGTGTTGTTTTTCCATGTATCTTGGTTTTCTATTCATTTGAATTTATTTTGTTTTAGTATTGCATGTATTGTAGCTTTTATTTTTATAGCTATTATTCACCATAGTGATGTTTTGATATGACTCCATTAAGTTTACATGTCATATGAAACAGTGTCTTTTTTTAGGAAAAATGACACTGCTGGAATATCTCAGTTCAATATTTGTTAAAAGGTGTCATTTTAGTTTACTATTTGCAAATGCAGCTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTGTGGGTACTTCAGTAATTTTCTATAGCAATATAATCTCATGAACATGTTTGTGAGTTGTTATTTGGTCTTATTGCAGATATTCGTGGGAAATTTGGATTCTAATGTCACAGATGAACACTTGAGACAAGTATTCAGCCAGTATGGAGAGTTGGTGCACGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGGTTGGCATTTTCAAAAACTTTTATGAACCAACCCCCTCCCAAACTCTTGGTGTTTGCTGACAAGTAGTTGTTTTGTTTTCCTTAATACCTATTTTAGAAGCTGCGCCGAGGAAGCTTTACGCATGTTGAATGGAACCCAAATTGGTGGACAAAACATTAGACTTTCATGGGGCCGCAGTCCTTCTAACAAGCAGGTAGTAGTATTGTTGTACTTCACTTATCATCAAGGATTGATTTATATTGAAACAAATAGTTATGATCCTCTAATGCAAATTTGCAGCCTCAAGCTGATCCTAATCAGTGGAATGGAGGTGGAGGATACTATGGGTATGGACAAGGGTATGAAAATTATAGCTATGCTCCAGCTGCCCAGGACCCTAACATGTTCTACGGTGGCTATGGCGGCGGGTATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATATATGTAGATGACGAAGCTGTAATTCTTGTGTCCCGCCTCCTGCTCGAACACAAGACCCTTGAACTTCTACTTGCCATTAGTAGAAGATTTTGGGGATGTTAGTCATCTATTCTGAACATTCTGTATGTGACTCTGATGACATGTTGTCACTTGTGTGTTGTATTTGGTGTTAGAAGGTTTTGCGTGTCGTGTTATTTGTTCTATTGTAGGATCATATCTATCCAAGAAGCGAGCTGAATTATCGGATTGTAATTTTCTGAAATCCTTGCTGAAAAAGCTCCTACATGGGTGAAATGCTGCTACTCCTTTTCTTTTTGGCCTTCCTAATTTCACTTATTCTGTCATGAAATTGTTTGATTTACACTCGTAGTTGCAGTAACTTTACATAGACTTGGCTTGCTGTTCCTCGAGTCCATATCAAGGTGGAAAGGTAGTCGAGGCAAATGCCTTAGCTTGACAAGGAATTTCATTAATAACTGGTTGAATAATTTGATATCTCTAGTAGATGTTTTAGGAGGAACAAATGACTATTGATATAACTTATTCTATATTGTTCCTCCAATGATTTTAAGGTCAAACGATTTTAGGGTAAATATCAGAGATGTAGTTCAACTATGACACAATTGAATCCAAACATAGAGCAATGACACAATTGAATCCAAACAACATTTATGACATAATTGAATCCAAACAAACAAAATGTTGAATTGAATTGCTATGTCACAATTGAATCCACTGCTATGTCACAATTGAATTGAACTGTACCACTACTTGTTCACTCTATACTCGAATTTGCATTGCCTATAGCACCAGTCGGCTTTGCACAACACGTCGAAGAATCGTACTAGATGAGGTGAGGCCCAAGATGAGAGACCTTATTGAACTATGCAAGGCCTCATATTGGACATTTTTCGGACATCCTTGGAATAAGTCAGCTTATGATATTAAATTATTATTCGCCAGCTGAAAATAGAAGGAAAAAAAAAAAATAAAACTAAATATTCCCGTGCGGTCGGTATCATCTTGACTTCCATAAGCTCGGTTTTTGATTGGTTGGATTGGCGAGCCAATACGATCCGGACCTCTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTCCTTTTAAAACGATAATTCTAATTCTTCCCGCGACTGCTTCTTGTTTTGCCTTTTCATTTCGCTTGCTTTCGACTTCTAGGGTTAGGGTTTCTCTTTGTTCAGGCGAAGCACCAAAGCTCTCTTCCTTCTTTCGGCTTTTCTGTACAATAAGGAGATCTTGTTCCGATTCGCCGAAACGATGCAGCCTGTACCTGGTGTTGCACCTCACAGTATGCCTCACCAAGCCCCTCAGTATCAGCAACAGCAACCTCCTTACATGATGATGCCTCCTCAGCCGCCTCAAGTGCAGCCTTCCACTCAGATGTGGCCTCAGCAGCCGCAGGCTTCTTCGCCTCAGGGCCAACCATCTCAACCAGCCAACGCCGATGAGGTCCGTACGCTCTGGATCGGAGACTTGCAATACTGGATGGACGAGAGCTATATTTTTAATTGCTTGGCTCATACAGGCGAGGTACGTCAAAGAACGACAATCTTTTTGAGGTCATGTCTGGATATGTATTTGTTTTCGTATTTGATAGTCGGTAATGTTGGAGTTTTAGGATTATTAGTTGTATTCTATCAAGATTTGAACTAACGCATGTTATTACAATGTGATCATGGTGGATAAGAAGTGGTTACAATTTTCCTTTTTAAAATTTAGTTCTTGCATGAATTAAGGAGGTTTATTTTATATCCTCAGATTTCATCCGTGAAAGTCATTCGGAACAAGCAAAACGGCCAGTCTGAGGGTTACGGCTTCATTGAATTTTTGACGCGTCCAGCTGCAGAAAGAGTACTTCAAACCTATAACGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGGGAGAAGCGACAGGACGATTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTATGTGTTACAAGAGACGTTTAGGGCACGTTTTACCTCCGTTAAGAGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTAAAGTTTGGAGACGAGAATGAACAAATGCGGGCGATGACTGAGATGAATGGGGTTCTCTGTTCAACCAGGCCCATGCGAATTGGACCTGCTGCTAACAAGAACACTTCTGGGAGTCAGCAATATGCGAAAAGTAATTACCACTCTCCCTCCAAAGGGGAAAAACGGAACTTCAAATTTTCTGTTGAATATATTCTGCATCATTAATTTGTTGTATGTATGCGGTTACGTTGATAGTTTTGGCATGCATTTTGCTTTCAATACGCCCAGATGAAGTCCGACCTTTATTTTCTGTTTGGATCTAGTTCCTCCGGTTACTTTTAGATTTAGTTACAAGTGTTTAAATTTTCCCGTCATACCTTGGAAGTTAGTAGCCTTTCATGCCTTTTCCTTCAGTGTACTTCCAATTCGAACTTTGGTCACTATAACTACTTTAAAGAGATTCATAAACTTATAAAACTCATCTTCTCTTTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCTGCTACCGATTTCAGCTGACATGCTTACCCTTTAGTACGTTGTTCCATTTAGGTCAGTTTTTTAACGCAAATGTCTTACCTCTTACATTTTTGTGGCATATATATGCTACTTTTTTTTTTTTTTTTTTTTAAATTCACCGTCAGTTCTGCAACGTTTAGTTTTTCCTTTCATTTGCATGGAGTAATTTTTTTCTCTCTCTGGCATATCAGTCTAATTCCATTAGAGTTTTTGTTGAAGCTCATGCCACTTAGGTTCTTTAGGTTGATGAAATATTGCAATTTCCAATAACTGGGATAGCAGGGTAGTTTGATTCTGTACTTCCTTTATACAACAGCTATAGCAGGACACGTAGGTTGTGCTTGTCCTTCACCCCCTTATATTTAGGGTTTACAGGATTTACGTTCCTACGTTTTCTTCTCAGTGTTAGATGATCGTATCCTGTTTATGCCAACGAAACCCTTACCTAGGCATAATAGAATTTTGGCACGTTTCTAGTTTTACTCTGTTCTTATTTCTTACAGGTATTTCTATTCTGTAGCTCAGTATTCCGTACTGTCATTCCTTTGGACTAATCTATTCTTCTTTAACGTTTTGGTTACATGGGGGTATAAGACGTATGTGCCCCTTTTGTAATATTATTGTATCAATTGTGTCTTGCTGATGTTACGGTTGGCTACTTTCATCTTTCCTAATTTTTGTTTTAACCTTGGCCAAGTTTACTCTGAATTTTCAATATGGAATAATATAGTGCTTGAATCAAAAGTTAGGCAGGCTATTTGTATTGTGTAGTATTTTAGGATGTGATGTTTTGTAATATCTGTCTTTTTGAATTACTCAGCGTTATTCTGTGGATTTTTTCTCATCCGATAGGGTATTCAATCACTTACATTCACCCATTTTACAATCTATGTTTGGTACGCATGTGCTATCTATTTTATATAATGGCCTTCATTTGATCAATGTTTTATCTTCGTTTGATCAATGTATTTTTTTCCACAGATTTTGTCTTTGTTTTTATTTTGGTATTCTTTGTTGTTCTAGTTAAAAAGATGATGTGGTCTTAAAATTAACTGACATGCCTCTCCATAAGAAAAAGCCTTTAGGTTGCTTTAGGCCTTTAAACATACTTTATATGATTATGCAATTTGGAATGGCCTTAGGTTGTAACAAAATAATGTTTCAATGTGTTCTGGAACAATGTTTATAAAATAATGTTTTAAACATACTTTTGAACTGTTTTTAGTTCCAAGTTTAAAAGAAAATTCATGTTCGTTTAATTTTTGCGTATGCAGCTTCATACCAGAATCCTCAAGGGGCTCAAGATGAGAATGATCCAAATAATACGACTGTGGGTACATTACTATTTTTCTTTTGTCATGCAATTTTATTTTCATTTTTTAATTTCTTAATTTGCTATCTTGCAGCTATTTGTGGGGAATTTGGATTCTAATATCACAGACGATCACTTGAGACATGTTTTTGGTCAGTATGGGGAATTGGTGCATGTAAAGATACCTGTAGGCAAACGATGTGGTTTTGTGCAATTTTCCGACAGGTAAGTAATTTAAAAGATGTAACCAAACATCTTAATCTCCCATGAATTGGTCATGACACGCTCAATGGTTATTTTGATTGTGTGGTATGTTAGAAACTGTGCTGAGGAAGCATTGCGTATGTTGAATGGATCCCAAATTGGTGGGCAGAACATTAGACTTTCATGGGGACGTAGTTCTTCAAATAAACAGGTAATAAATAGTTCTTTCGGATGACTTCCATGGGAACATTAGACTTTCATGGGGACGTAATCCTTCAAATAAACGTCCAAAGATGGTTTTTTATTATAGTTCTTTCAGAATAAGTTATTTTGTTTCCTCACCTTTTAGCCTCAGGCGGATCCTAACCAATGGAACGGAGGCAGCTATCACGGATATGGGCAAGGATACGAAAACTATAGCTATGCACCAGCCCCGCAGGACCCTAATATGTTCTACGGTGGCTACAGCGGCTATGGTAGTTACCAGCAGCCACCACCACAGCAACCGCAGCAACAGCAAGGAGGGTACATGTAGATTTGATGTTTTGTTGTTCTCTGCCCTGCCCTCCCCCTGTTATGTGATTTGGTTAAAAATTTTGAAAACGCTATTTCAACCTTCTCATCCACAGTAACTCTCTTCCTTCCTGTTCTCTATTCTTCCATAACTCTTTGATGACATTAAAAAAACCCTTCTTTTCCCCTTTCTTTTTATCATGTTTGATTGTGTACTTCGTGTGTATCTTTTTAAGAAGAGCAAGTGAGCTACTGATTTACATACTGGCAAGTAGATTATCAGTGAATGTAGCTTGAATATGAAGTTTCACTTCTAGCGACTGTATGTATGGCTGCTCTGGGCTTGCCTTTGTTTTACCATCTTTTTAGTACTTCTTGAAGGGTGCAGCACGAGTACTTTCATTTGGTCTCGTGACTCCTTTGGCTGAGAAATTTGTAGAAGATCAAGAGTTGGGTGATTTTATCGTCTCTTTGATTGGGTCAATCTTCTTTCTCTTGGAAGTTTTAAGCGCATATTTTCATATGATATGGCCTCCTCGTTTTTGAGACATTGTTTGGAGACATTATCTGTCGTCTTGATTTCATTTAATTGTTTAATTGTTCAACTTTATTTGGATTTAGAGCATTATCTTGGTTAATTCAAGGTTATTTCTGACATACATTGGGGAATTTTTTTTGTAGTTTGATATTTACTACGGGGACTATACTTTTTAATGATTATTAG

mRNA sequence

ATAAGCCCTTTCCTTCTGGCTTCTCTTTCGCTCGCGGCTTGCCTGCTTCAGACTGCTAGGGTTAGGGTTTCTCCGATATCAACGAGATCCCCAAATTCCCCACATTTAACCAAATTCTTTCGTTGAACCGACGATGCAGCCTGCTCCTGGTGTTGCCCTTCACAACATGCCTCACCAAGCTCCTCAGTACCAGCAACAGCAACCTCCTTACATGATGATGCCGCCTCAAGCACAGCCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGTTTCGCCTCAGGGCCAACCGCCTCAACCAGCTAACGCCGATGAGGTCCGTACGCTCTGGATCGGTGACTTGCAGTATTGGATGGACGAAAACTATCTCTTCAATTGCTTTGCTCATACAGGCGAGGTTTCCTCCGTGAAAGTTATTCGGAATAAGCAAACTGGCCAGTCCGAGGGCTATGGCTTTATTGAGTTTTTAACGCGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAACGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGAGAAAAGCGACAGGACGACTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCGCGTTATACCTCCCTTAAGGGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTTAAGTTCGGAGACGAGACGGAGCAAATGCGGGCAATGACTGAGATGAACGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCCGCTAACAAGAACACTTCTGGCGGTCAGCAATATGCGAAAAACAGAAGTTCGATTTTCTATGGAGTACATTCTGCACTATTCACTCATTGTCACTTAGCTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTGTGGGTACTTCAATATTCGTGGGAAATTTGGATTCTAATGTCACAGATGAACACTTGAGACAAGTATTCAGCCAGTATGGAGAGTTGGTGCACGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGAAGCTGCGCCGAGGAAGCTTTACGCATGTTGAATGGAACCCAAATTGGTGGACAAAACATTAGACTTTCATGGGGCCGCAGTCCTTCTAACAAGCAGCCTCAAGCTGATCCTAATCAGTGGAATGGAGGTGGAGGATACTATGGGTATGGACAAGGGTATGAAAATTATAGCTATGCTCCAGCTGCCCAGGACCCTAACATGTTCTACGGTGGCTATGGCGGCGGGTATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATATATGCGAAGCACCAAAGCTCTCTTCCTTCTTTCGGCTTTTCTGTACAATAAGGAGATCTTGTTCCGATTCGCCGAAACGATGCAGCCTGTACCTGGTGTTGCACCTCACAGTATGCCTCACCAAGCCCCTCAGTATCAGCAACAGCAACCTCCTTACATGATGATGCCTCCTCAGCCGCCTCAAGTGCAGCCTTCCACTCAGATGTGGCCTCAGCAGCCGCAGGCTTCTTCGCCTCAGGGCCAACCATCTCAACCAGCCAACGCCGATGAGGTCCGTACGCTCTGGATCGGAGACTTGCAATACTGGATGGACGAGAGCTATATTTTTAATTGCTTGGCTCATACAGGCGAGATTTCATCCGTGAAAGTCATTCGGAACAAGCAAAACGGCCAGTCTGAGGGTTACGGCTTCATTGAATTTTTGACGCGTCCAGCTGCAGAAAGAGTACTTCAAACCTATAACGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGGGAGAAGCGACAGGACGATTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTATGTGTTACAAGAGACGTTTAGGGCACGTTTTACCTCCGTTAAGAGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTAAAGTTTGGAGACGAGAATGAACAAATGCGGGCGATGACTGAGATGAATGGGGTTCTCTGTTCAACCAGGCCCATGCGAATTGGACCTGCTGCTAACAAGAACACTTCTGGGAGTCAGCAATATGCGAAAACTTCATACCAGAATCCTCAAGGGGCTCAAGATGAGAATGATCCAAATAATACGACTCTATTTGTGGGGAATTTGGATTCTAATATCACAGACGATCACTTGAGACATGTTTTTGGTCAGTATGGGGAATTGGTGCATGTAAAGATACCTGTAGGCAAACGATGTGGTTTTGTGCAATTTTCCGACAGAAACTGTGCTGAGGAAGCATTGCGTATGTTGAATGGATCCCAAATTGGTGGGCAGAACATTAGACTTTCATGGGGACGTAGTTCTTCAAATAAACAGCCTCAGGCGGATCCTAACCAATGGAACGGAGGCAGCTATCACGGATATGGGCAAGGATACGAAAACTATAGCTATGCACCAGCCCCGCAGGACCCTAATATGTTCTACGGTGGCTACAGCGGCTATGGTAGTTACCAGCAGCCACCACCACAGCAACCGCAGCAACAGCAAGGAGGTTTGATATTTACTACGGGGACTATACTTTTTAATGATTATTAG

Coding sequence (CDS)

ATGCAGCCTGCTCCTGGTGTTGCCCTTCACAACATGCCTCACCAAGCTCCTCAGTACCAGCAACAGCAACCTCCTTACATGATGATGCCGCCTCAAGCACAGCCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGTTTCGCCTCAGGGCCAACCGCCTCAACCAGCTAACGCCGATGAGGTCCGTACGCTCTGGATCGGTGACTTGCAGTATTGGATGGACGAAAACTATCTCTTCAATTGCTTTGCTCATACAGGCGAGGTTTCCTCCGTGAAAGTTATTCGGAATAAGCAAACTGGCCAGTCCGAGGGCTATGGCTTTATTGAGTTTTTAACGCGTCCAGCTGCAGAAAGAGTACTTCAAACGTATAACGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGAGAAAAGCGACAGGACGACTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCGCGTTATACCTCCCTTAAGGGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTTAAGTTCGGAGACGAGACGGAGCAAATGCGGGCAATGACTGAGATGAACGGTGTTCTCTGTTCATCCAGGCCCATGCGAATTGGACCTGCCGCTAACAAGAACACTTCTGGCGGTCAGCAATATGCGAAAAACAGAAGTTCGATTTTCTATGGAGTACATTCTGCACTATTCACTCATTGTCACTTAGCTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTGTGGGTACTTCAATATTCGTGGGAAATTTGGATTCTAATGTCACAGATGAACACTTGAGACAAGTATTCAGCCAGTATGGAGAGTTGGTGCACGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGAAGCTGCGCCGAGGAAGCTTTACGCATGTTGAATGGAACCCAAATTGGTGGACAAAACATTAGACTTTCATGGGGCCGCAGTCCTTCTAACAAGCAGCCTCAAGCTGATCCTAATCAGTGGAATGGAGGTGGAGGATACTATGGGTATGGACAAGGGTATGAAAATTATAGCTATGCTCCAGCTGCCCAGGACCCTAACATGTTCTACGGTGGCTATGGCGGCGGGTATGGGAACTACCAGCAACCAGCACCACAGCAGCCGTCGCAGCAACAAGGAGGATATATGCGAAGCACCAAAGCTCTCTTCCTTCTTTCGGCTTTTCTGTACAATAAGGAGATCTTGTTCCGATTCGCCGAAACGATGCAGCCTGTACCTGGTGTTGCACCTCACAGTATGCCTCACCAAGCCCCTCAGTATCAGCAACAGCAACCTCCTTACATGATGATGCCTCCTCAGCCGCCTCAAGTGCAGCCTTCCACTCAGATGTGGCCTCAGCAGCCGCAGGCTTCTTCGCCTCAGGGCCAACCATCTCAACCAGCCAACGCCGATGAGGTCCGTACGCTCTGGATCGGAGACTTGCAATACTGGATGGACGAGAGCTATATTTTTAATTGCTTGGCTCATACAGGCGAGATTTCATCCGTGAAAGTCATTCGGAACAAGCAAAACGGCCAGTCTGAGGGTTACGGCTTCATTGAATTTTTGACGCGTCCAGCTGCAGAAAGAGTACTTCAAACCTATAACGGTACCCCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCTGGGGAGAAGCGACAGGACGATTCTCCTGATTACACAATTTTTGTAGGGGATTTAGCTGGTGATGTTACTGATTATGTGTTACAAGAGACGTTTAGGGCACGTTTTACCTCCGTTAAGAGTGCCAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTAAAGTTTGGAGACGAGAATGAACAAATGCGGGCGATGACTGAGATGAATGGGGTTCTCTGTTCAACCAGGCCCATGCGAATTGGACCTGCTGCTAACAAGAACACTTCTGGGAGTCAGCAATATGCGAAAACTTCATACCAGAATCCTCAAGGGGCTCAAGATGAGAATGATCCAAATAATACGACTCTATTTGTGGGGAATTTGGATTCTAATATCACAGACGATCACTTGAGACATGTTTTTGGTCAGTATGGGGAATTGGTGCATGTAAAGATACCTGTAGGCAAACGATGTGGTTTTGTGCAATTTTCCGACAGAAACTGTGCTGAGGAAGCATTGCGTATGTTGAATGGATCCCAAATTGGTGGGCAGAACATTAGACTTTCATGGGGACGTAGTTCTTCAAATAAACAGCCTCAGGCGGATCCTAACCAATGGAACGGAGGCAGCTATCACGGATATGGGCAAGGATACGAAAACTATAGCTATGCACCAGCCCCGCAGGACCCTAATATGTTCTACGGTGGCTACAGCGGCTATGGTAGTTACCAGCAGCCACCACCACAGCAACCGCAGCAACAGCAAGGAGGTTTGATATTTACTACGGGGACTATACTTTTTAATGATTATTAG

Protein sequence

MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQQYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQQGGYMRSTKALFLLSAFLYNKEILFRFAETMQPVPGVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQPANADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARFTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTSGSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGKRCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGYGQGYENYSYAPAPQDPNMFYGGYSGYGSYQQPPPQQPQQQQGGLIFTTGTILFNDY

Homology

[Close]

BLAST of CmaCh18G002500 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.1e-135
Identity = 257/404 (63.61%), Postives = 302/404 (74.75%), Query Frame = 0


Query: 455 PGVAPHSMPHQAPQYQQQQPP------YMMMP--PQPPQVQPSTQ-MWPQQPQ------A 514
           P +AP SM     QYQQQ PP      +MM P  PQ PQ QP +Q  W QQP        
Sbjct: 10  PPMAPMSMDQH--QYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQQPSQQQYGAM 69

Query: 515 SSPQGQPSQPANADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGY 574
           ++    PS   N +EVR+LWIGDLQYWMDE+Y+  C  HTGE+ S KVIRNKQ GQSEGY
Sbjct: 70  ATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGY 129

Query: 575 GFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGE-KRQDDSPDYTIFVGDLAGDV 634
           GF+EF +  AAE +LQTYNGT MPN  QNFR+NWAS G  +R+DDS ++TIFVGDLA DV
Sbjct: 130 GFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHTIFVGDLAADV 189

Query: 635 TDYVLQETFRARFTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRP 694
           TDY+LQETF++ ++SV+ AKVV DR+TGR+KGYGFVKF DE+EQ+RAMTEMNGVLCSTRP
Sbjct: 190 TDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRP 249

Query: 695 MRIGPAANKNTSGSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQY 754
           MRIGPAANK   G+ Q  K +YQNPQ  Q E+DPNNTT+FVG LD  + ++HLR VF  Y
Sbjct: 250 MRIGPAANKKPVGTPQ--KATYQNPQATQGESDPNNTTIFVGGLDPTVAEEHLRQVFSPY 309

Query: 755 GELVHVKIPVGKRCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPN 814
           GELVHVKI  GKRCGFVQF  R  AE+AL  LNG+Q+GGQ+IRLSWGRS S+K  Q D  
Sbjct: 310 GELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSK--QTDQT 369

Query: 815 QW--NGGSYHGYGQGYENYSYAPAPQDPNMFYGGYSGYGSYQQP 841
           QW  +GG+Y+GYGQGYE Y YAP  QDPNM+YG Y GY +YQQP
Sbjct: 370 QWGGSGGAYYGYGQGYEAYGYAPPAQDPNMYYGNYPGYANYQQP 407

[Close]

BLAST of CmaCh18G002500 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.5e-132
Identity = 260/402 (64.68%), Postives = 298/402 (74.13%), Query Frame = 0


Query: 457 VAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQP--QASSPQGQPSQPANADE 516
           + P   PHQ      QQPP M   P PPQ     Q+ P QP   A  PQ  P+ PA ADE
Sbjct: 32  IPPPMPPHQYGAPPPQQPPAMWGQP-PPQAHYG-QVPPPQPYYAAPPPQAMPA-PAAADE 91

Query: 517 VRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAAERVL 576
           V+TLWIGDLQ WMDESYI+NC A TGE+ SVK+IR+KQ+GQ +GYGF+EF +R AA+R+L
Sbjct: 92  VKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRIL 151

Query: 577 QTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARFTSV 636
           QTYNG  MPN    FRLNWASAGEKR DD+PDYTIFVGDLA DVTDY+LQETFR  + SV
Sbjct: 152 QTYNGQMMPNVEMVFRLNWASAGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSV 211

Query: 637 KSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTSGSQQ 696
           K AKVV D++T R+KGYGFVKFGD  EQ RAMTEMNG+LCS+RPMRIGPAANK T+G Q+
Sbjct: 212 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 271

Query: 697 YAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGKRCGF 756
                  N QGAQ ENDPNNTT+FVG LD N+T+D L+ VF  YGE+VHVKIPVGKRCGF
Sbjct: 272 ----RVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGF 331

Query: 757 VQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWN-----GGSYHGYG 816
           VQ+ +R  AE+AL +L G+ IGGQN+RLSWGRS SNKQPQ D NQW      GG Y GYG
Sbjct: 332 VQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYGGYG 391

Query: 817 QGYENYSYAPAPQDPNMF-YGGYSGYGSYQQP--PPQQPQQQ 849
           QGYE Y     PQDPNM+ YG Y+GY +YQQ     QQP QQ
Sbjct: 392 QGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQQVAQQQPPQQ 425

[Close]

BLAST of CmaCh18G002500 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 3.6e-131
Identity = 264/420 (62.86%), Postives = 308/420 (73.33%), Query Frame = 0


Query: 452 QPVP-GVAPHSMPHQAPQYQQ-QQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPS-Q 511
           QP P G+ PH  P  + Q Q   Q PY +    P    P  QMW   PQA++P   PS Q
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAP----PPPQMW--NPQAAAP---PSVQ 63

Query: 512 PANADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRP 571
           P  ADE+RTLWIGDLQYWMDE++++ C AHTGE+ S KVIRNKQ GQ EGYGFIEF +  
Sbjct: 64  PTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHA 123

Query: 572 AAERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQE 631
           AAERVLQT+N  P+P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L E
Sbjct: 124 AAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLE 183

Query: 632 TFRARFTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAA 691
           TFRA + SVK AKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CSTRPMRIGPAA
Sbjct: 184 TFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAA 243

Query: 692 NKNTSGSQQYAKTSYQ-NPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHV 751
           +K     Q   + SYQ +  G   +NDPNNTT+FVG LD+++TDDHL++VF QYGE+VHV
Sbjct: 244 SKKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHV 303

Query: 752 KIPVGKRCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGS 811
           KIP GKRCGFVQFS+++CAEEALRMLNG Q+GG  +RLSWGRS SNKQ   DP+Q+    
Sbjct: 304 KIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQF---Y 363

Query: 812 YHGYGQGYENYSYAPAPQDPNMFYGGYSGYG----------SYQQPPPQQPQQQQGGLIF 855
           Y GYGQG E Y Y   PQDPN +YGGYSG G          + QQPP Q PQQQQ G  +
Sbjct: 364 YGGYGQGQEQYGYT-MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQQVGFSY 405

[Close]

BLAST of CmaCh18G002500 vs. ExPASy Swiss-Prot
Match: Q93W34 (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.8e-125
Identity = 247/416 (59.38%), Postives = 294/416 (70.67%), Query Frame = 0


Query: 452 QPVP-----GVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQP 511
           QP P        P  +P     Y QQQ  +MM   Q  Q QP    W QQ   SS Q Q 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQPPAG-WNQQSAPSSGQPQQ 63

Query: 512 SQ--------PANADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEG 571
            Q        P +A E+R+LWIGDLQ WMDE+Y+ N    TGE ++ KVIRNKQNG SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 572 YGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAG 631
           YGFIEF+    AER LQTYNG PMP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 632 DVTDYVLQETFRARFTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCST 691
           DVTD++L ETF+A ++SVK AKVV DR TGR+KGYGFV+F DE+EQ+RAMTEMNG  CS+
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243

Query: 692 RPMRIGPAANKNTSGSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFG 751
           RPMR GPAANK     Q     SYQN QG   E+DP NTT+FVG +D ++T+D L+ VFG
Sbjct: 244 RPMRTGPAANKKPLTMQ---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFG 303

Query: 752 QYGELVHVKIPVGKRCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQAD 811
           Q+GELVHVKIP GKRCGFVQ+++R CAE+AL +LNG+Q+GGQ+IRLSWGRS SNKQ Q D
Sbjct: 304 QFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPD 363

Query: 812 PNQW-NGGSYHGY-GQGYENYSYAPAPQDPNMFYGGYS--GYGSYQQPPPQQPQQQ 849
             Q+  GG Y+GY  QGYE Y YAP PQDPN +YGGY+  GYG+YQQP   Q QQQ
Sbjct: 364 QAQYGGGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQQQ 415

[Close]

BLAST of CmaCh18G002500 vs. ExPASy Swiss-Prot
Match: Q9FPJ8 (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-117
Identity = 230/376 (61.17%), Postives = 275/376 (73.14%), Query Frame = 0


Query: 472 QQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQ-PANADEVRTLWIGDLQYWMDES 531
           QQ  +MMM  Q  Q Q         P      G  SQ P +A +V++LWIGDLQ WMDE+
Sbjct: 18  QQHLWMMMQQQQQQQQ---MQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWMDEN 77

Query: 532 YIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFR 591
           YI +  A +GE +S KVIRNK  GQSEGYGFIEF++   AERVLQTYNG PMP+  Q FR
Sbjct: 78  YIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFR 137

Query: 592 LNW--ASAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARFTSVKSAKVVIDRLTGR 651
           LNW  A AGEKR Q + PD+TIFVGDLA +VTDY+L +TF+  + SVK AKVV+DR TGR
Sbjct: 138 LNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGR 197

Query: 652 TKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTSGSQQYAKTSYQNPQGAQ 711
           +KGYGFV+F DENEQMRAMTEMNG  CSTRPMRIGPAANKN    Q      YQN QGA 
Sbjct: 198 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ---PAMYQNTQGAN 257

Query: 712 -DENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGKRCGFVQFSDRNCAEEA 771
             +NDPNNTT+FVG LD+N+TDD L+ +FGQ+GEL+HVKIP GKRCGFVQ++++  AE A
Sbjct: 258 AGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHA 317

Query: 772 LRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGY---GQGYENYSYAPAPQD 831
           L +LNG+Q+GGQ+IRLSWGRS +    Q+D  QWNGG Y+GY    QG   Y+  P  QD
Sbjct: 318 LSVLNGTQLGGQSIRLSWGRSPNK---QSDQAQWNGGGYYGYPPQPQGGYGYAAQPPTQD 377

Query: 832 PNMFYGGYSGYGSYQQ 840
           PN +YGGY+GYG+YQQ
Sbjct: 378 PNAYYGGYTGYGNYQQ 384

[Close]

BLAST of CmaCh18G002500 vs. ExPASy TrEMBL
Match: A0A6J1JV34 (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490007 PE=4 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 3.0e-234
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 451 MQPVPGVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQPA 510
           MQPVPGVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQPA
Sbjct: 1   MQPVPGVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQPA 60

Query: 511 NADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAA 570
           NADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAA
Sbjct: 61  NADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAA 120

Query: 571 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 630
           ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 631 FTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTS 690
           FTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTS
Sbjct: 181 FTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTS 240

Query: 691 GSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGK 750
           GSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGK
Sbjct: 241 GSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGK 300

Query: 751 RCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGYGQ 810
           RCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGYGQ
Sbjct: 301 RCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGYGQ 360

Query: 811 GYENYSYAPAPQDPNMFYGGYSGYGSYQQPPPQQPQQQQGG 852
           GYENYSYAPAPQDPNMFYGGYSGYGSYQQPPPQQPQQQQGG
Sbjct: 361 GYENYSYAPAPQDPNMFYGGYSGYGSYQQPPPQQPQQQQGG 401

[Close]

BLAST of CmaCh18G002500 vs. ExPASy TrEMBL
Match: A0A6J1JV65 (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490024 PE=4 SV=1)

HSP 1 Score: 808.5 bits (2087), Expect = 2.7e-230
Identity = 401/425 (94.35%), Postives = 401/425 (94.35%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVTDEH 300
           QYAK                    SYQNPQGTQNENDPNNTT    IFVGNLDSNVTDEH
Sbjct: 241 QYAK-------------------TSYQNPQGTQNENDPNNTT----IFVGNLDSNVTDEH 300

Query: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360
           LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN
Sbjct: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360

Query: 361 KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQ 420
           KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQ
Sbjct: 361 KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQ 402

Query: 421 QGGYM 426
           QGGYM
Sbjct: 421 QGGYM 402

[Close]

BLAST of CmaCh18G002500 vs. ExPASy TrEMBL
Match: A0A6J1GRK0 (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456823 PE=4 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 1.3e-229
Identity = 400/425 (94.12%), Postives = 400/425 (94.12%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVTDEH 300
           QYAK                    SYQNPQGTQNENDPNNTT    IFVGNLDSNVTDEH
Sbjct: 241 QYAK-------------------TSYQNPQGTQNENDPNNTT----IFVGNLDSNVTDEH 300

Query: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360
           LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN
Sbjct: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360

Query: 361 KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQ 420
           KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFY GYGGGYGNYQQPAPQQPSQQ
Sbjct: 361 KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQ 402

Query: 421 QGGYM 426
           QGGYM
Sbjct: 421 QGGYM 402

[Close]

BLAST of CmaCh18G002500 vs. ExPASy TrEMBL
Match: A0A6J1JYI0 (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490024 PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 6.5e-229
Identity = 401/426 (94.13%), Postives = 401/426 (94.13%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVTDEH 300
           QYAK                    SYQNPQGTQNENDPNNTT    IFVGNLDSNVTDEH
Sbjct: 241 QYAK-------------------TSYQNPQGTQNENDPNNTT----IFVGNLDSNVTDEH 300

Query: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360
           LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN
Sbjct: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360

Query: 361 KQ-PQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQ 420
           KQ PQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQ
Sbjct: 361 KQVPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQ 403

Query: 421 QQGGYM 426
           QQGGYM
Sbjct: 421 QQGGYM 403

[Close]

BLAST of CmaCh18G002500 vs. ExPASy TrEMBL
Match: A0A6J1GRE4 (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456823 PE=4 SV=1)

HSP 1 Score: 801.6 bits (2069), Expect = 3.2e-228
Identity = 400/426 (93.90%), Postives = 400/426 (93.90%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVTDEH 300
           QYAK                    SYQNPQGTQNENDPNNTT    IFVGNLDSNVTDEH
Sbjct: 241 QYAK-------------------TSYQNPQGTQNENDPNNTT----IFVGNLDSNVTDEH 300

Query: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360
           LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN
Sbjct: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360

Query: 361 KQ-PQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQ 420
           KQ PQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFY GYGGGYGNYQQPAPQQPSQ
Sbjct: 361 KQVPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQ 403

Query: 421 QQGGYM 426
           QQGGYM
Sbjct: 421 QQGGYM 403

[Close]

BLAST of CmaCh18G002500 vs. NCBI nr
Match: KAG6584082.1 (Polyadenylate-binding protein RBP45, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1510.0 bits (3908), Expect = 0.0e+00
Identity = 758/862 (87.94%), Postives = 784/862 (90.95%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMM---PPQAQPVPQMWPQQPQAVSPQGQPPQPA 60
           MQPAPGVA HNMPHQAPQYQQQQPPYMMM   PPQ QPVPQMWPQQPQA SPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  NADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           + DEVRTLWIGDLQYWMDEN LFNCFAHTGE+SSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTPMP GAQNFRLNWASAGEKRQDDSP+YTIFVGDLAGDVTDYVLQETFR R
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180

Query: 181 YTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTS 240
           YTS+KGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGV+CSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GGQQYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVT 300
           G QQYAK                    SYQNPQGTQNENDPNNTT    IFVGNLDSNVT
Sbjct: 241 GTQQYAK-------------------TSYQNPQGTQNENDPNNTT----IFVGNLDSNVT 300

Query: 301 DEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRS 360
           DEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCA+EALR LNGTQIGGQ IRLSWGRS
Sbjct: 301 DEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCADEALRALNGTQIGGQTIRLSWGRS 360

Query: 361 PSNKQPQADPNQWN--GGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQ 420
           PSNKQPQADPNQWN  GGGGYYGYGQGYENYSYAPAAQDPNMFY GY GGYGNYQQP PQ
Sbjct: 361 PSNKQPQADPNQWNGGGGGGYYGYGQGYENYSYAPAAQDPNMFYSGY-GGYGNYQQPGPQ 420

Query: 421 QPSQQQGGYMRSTKALFLL----SAFLYNKEILFRFAETMQPVPGVAPHSMPHQAPQYQQ 480
           QPSQQQGG  R T+ LF L    S+   +KEIL  F E MQP PG+APH+MPHQAPQYQQ
Sbjct: 421 QPSQQQGG-GRDTQTLFFLSSSSSSSSLHKEILLPFFEIMQPAPGIAPHNMPHQAPQYQQ 480

Query: 481 QQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQPANADEVRTLWIGDLQYWMDESY 540
           QQPPYMMMPPQPPQ QP  QMWPQQPQA+SPQGQPSQPANADEVRTLWIGDLQYWMDE+Y
Sbjct: 481 QQPPYMMMPPQPPQPQPVPQMWPQQPQAASPQGQPSQPANADEVRTLWIGDLQYWMDENY 540

Query: 541 IFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRL 600
           IFNC AHTGE+SSVKVIRNKQ GQSEGYGF+EFLTRPAAERVLQ YNGT MPNGAQNFRL
Sbjct: 541 IFNCFAHTGEVSSVKVIRNKQTGQSEGYGFLEFLTRPAAERVLQAYNGTAMPNGAQNFRL 600

Query: 601 NWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARFTSVKSAKVVIDRLTGRTKGY 660
           NWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR+TSVK AKVVIDRLTGRTKGY
Sbjct: 601 NWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGY 660

Query: 661 GFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTSGSQQYAKTSYQNPQGAQDEND 720
           GFVKFGDE+EQMRAMTEMNGVLCS+RPMRIGPAANKNTSGSQQYAK SYQNPQG Q+E+D
Sbjct: 661 GFVKFGDESEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGSQQYAKNSYQNPQGTQNESD 720

Query: 721 PNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGKRCGFVQFSDRNCAEEALRMLN 780
           PNNTT+FVGNLDSN+TDDHLR VFGQYGELVHVKIPVGKRCGFVQFSDRNCAEEALRMLN
Sbjct: 721 PNNTTIFVGNLDSNVTDDHLRQVFGQYGELVHVKIPVGKRCGFVQFSDRNCAEEALRMLN 780

Query: 781 GSQIGGQNIRLSWGRSSSNK-QPQADPNQWN-GGSYHGYGQGYENYSYAPAPQDPNMFYG 840
           G+QIGGQNIRLSWGRS SNK QPQADPNQWN GG Y+GYGQGYEN+SY PAPQDPNMFY 
Sbjct: 781 GTQIGGQNIRLSWGRSPSNKQQPQADPNQWNGGGGYYGYGQGYENFSYPPAPQDPNMFYS 837

Query: 841 GYSGYGSYQQPPPQQPQQQQGG 852
           GY GYG+YQQPPPQQPQQQQ G
Sbjct: 841 GYGGYGNYQQPPPQQPQQQQQG 837

[Close]

BLAST of CmaCh18G002500 vs. NCBI nr
Match: DAD49751.1 (TPA_asm: hypothetical protein HUJ06_032059 [Nelumbo nucifera])

HSP 1 Score: 851.7 bits (2199), Expect = 5.7e-243
Identity = 471/735 (64.08%), Postives = 521/735 (70.88%), Query Frame = 0


Query: 1   MQPAPGV-----ALHNMPHQAPQYQQQQPP----YMMMPPQAQPV--------------- 60
           MQPA GV         M  Q  Q+ QQQPP    +MMMPPQ QP+               
Sbjct: 2   MQPATGVVPPPMVPPQMDQQHQQHPQQQPPPQQQWMMMPPQ-QPLQPQPPPVWNQQPPQV 61

Query: 61  --PQMWPQ--QPQAVSPQGQ------PPQPANADEVRTLWIGDLQYWMDENYLFNCFAHT 120
             PQ+ PQ  QPQA  PQ Q      P QP +ADEVRTLWIGDLQYWM+E+Y+ +CFAHT
Sbjct: 62  QQPQVPPQQPQPQAQQPQPQPQHQYPPTQPTSADEVRTLWIGDLQYWMEESYIHSCFAHT 121

Query: 121 GEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWAS--AG 180
           GEV+SVKVIRNKQTGQSEGYGFIEF+TRPAAER+LQTYNGT MPN  QNFRLNWAS   G
Sbjct: 122 GEVASVKVIRNKQTGQSEGYGFIEFVTRPAAERILQTYNGTLMPNAEQNFRLNWASFGLG 181

Query: 181 EKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKGYGFVKFG 240
           E+R DDS D+TIFVGDLA DVTDY+LQETFR+ Y S+KGAKVV DR TGR+KGYGFV+FG
Sbjct: 182 ERRPDDSADFTIFVGDLASDVTDYMLQETFRSHYPSVKGAKVVTDRTTGRSKGYGFVRFG 241

Query: 241 DETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQQYAKNRSSIFYGVHSALFTHCHLA 300
           DE+EQ+RAMTEMNG+ CS+RPMRIGPA  K   GGQQY+K                   A
Sbjct: 242 DESEQIRAMTEMNGIFCSTRPMRIGPATTKKNVGGQQYSK-------------------A 301

Query: 301 SYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGF 360
            YQN QGTQNENDPNNTT    IFVG LDSNVTD+HLRQVFSQ+GELVHVKIP GKRCGF
Sbjct: 302 PYQNTQGTQNENDPNNTT----IFVGGLDSNVTDDHLRQVFSQFGELVHVKIPVGKRCGF 361

Query: 361 VQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGYYGYGQGYE 420
           VQF +R+CAEEAL MLNGTQ+GGQNIRLSWGRSPS+KQPQ DPNQWN  GGYYGYGQGYE
Sbjct: 362 VQFVNRACAEEALLMLNGTQLGGQNIRLSWGRSPSSKQPQPDPNQWN--GGYYGYGQGYE 421

Query: 421 NYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQQGGYMRSTKALFLLSAFLYNKEIL 480
            Y YAP  QDPNM+  G   GYGNYQQ  PQ P QQ                        
Sbjct: 422 AYGYAPPPQDPNMYAYGAYPGYGNYQQ-QPQVPPQQ------------------------ 481

Query: 481 FRFAETMQPVPGVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQG 540
                                 PQ Q QQP            QP       QPQ   P  
Sbjct: 482 ----------------------PQPQAQQP------------QP-------QPQHQYP-- 541

Query: 541 QPSQPANADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEF 600
            P+QP +ADEVRTLWIGDLQYWM+ESYI +C AHTGE++SVKVIRNKQ GQSEGYGFIEF
Sbjct: 542 -PTQPTSADEVRTLWIGDLQYWMEESYIHSCFAHTGEVASVKVIRNKQTGQSEGYGFIEF 601

Query: 601 LTRPAAERVLQTYNGTPMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYV 660
           +TRPAAER+LQTYNGT MPN  QNFRLNWAS   GE+R DDS D+TIFVGDLA DVTDY+
Sbjct: 602 VTRPAAERILQTYNGTLMPNAEQNFRLNWASFGLGERRPDDSADFTIFVGDLASDVTDYM 641

Query: 661 LQETFRARFTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIG 698
           LQETFR+ + SVK AKVV DR TGR+KGYGFV+FGDE+EQ+RAMTEMNG+ CSTRPMRIG
Sbjct: 662 LQETFRSHYPSVKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMTEMNGIFCSTRPMRIG 641

[Close]

BLAST of CmaCh18G002500 vs. NCBI nr
Match: XP_022994197.1 (polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 821.6 bits (2121), Expect = 6.3e-234
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 451 MQPVPGVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQPA 510
           MQPVPGVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQPA
Sbjct: 1   MQPVPGVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQPA 60

Query: 511 NADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAA 570
           NADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAA
Sbjct: 61  NADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAA 120

Query: 571 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 630
           ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 631 FTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTS 690
           FTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTS
Sbjct: 181 FTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTS 240

Query: 691 GSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGK 750
           GSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGK
Sbjct: 241 GSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGK 300

Query: 751 RCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGYGQ 810
           RCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGYGQ
Sbjct: 301 RCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGYGQ 360

Query: 811 GYENYSYAPAPQDPNMFYGGYSGYGSYQQPPPQQPQQQQGG 852
           GYENYSYAPAPQDPNMFYGGYSGYGSYQQPPPQQPQQQQGG
Sbjct: 361 GYENYSYAPAPQDPNMFYGGYSGYGSYQQPPPQQPQQQQGG 401

[Close]

BLAST of CmaCh18G002500 vs. NCBI nr
Match: XP_022994222.1 (polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 808.5 bits (2087), Expect = 5.5e-230
Identity = 401/425 (94.35%), Postives = 401/425 (94.35%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVTDEH 300
           QYAK                    SYQNPQGTQNENDPNNTT    IFVGNLDSNVTDEH
Sbjct: 241 QYAK-------------------TSYQNPQGTQNENDPNNTT----IFVGNLDSNVTDEH 300

Query: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360
           LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN
Sbjct: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360

Query: 361 KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQ 420
           KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQ
Sbjct: 361 KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQ 402

Query: 421 QGGYM 426
           QGGYM
Sbjct: 421 QGGYM 402

[Close]

BLAST of CmaCh18G002500 vs. NCBI nr
Match: XP_022954608.1 (polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita moschata] >XP_023542693.1 polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573195.1 Polyadenylate-binding protein RBP45, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 806.2 bits (2081), Expect = 2.7e-229
Identity = 400/425 (94.12%), Postives = 400/425 (94.12%), Query Frame = 0


Query: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60
           MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD
Sbjct: 1   MQPAPGVALHNMPHQAPQYQQQQPPYMMMPPQAQPVPQMWPQQPQAVSPQGQPPQPANAD 60

Query: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120
           EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV
Sbjct: 61  EVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 120

Query: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180
           LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS
Sbjct: 121 LQTYNGTPMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTS 180

Query: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240
           LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ
Sbjct: 181 LKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVLCSSRPMRIGPAANKNTSGGQ 240

Query: 241 QYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNENDPNNTTVGTSIFVGNLDSNVTDEH 300
           QYAK                    SYQNPQGTQNENDPNNTT    IFVGNLDSNVTDEH
Sbjct: 241 QYAK-------------------TSYQNPQGTQNENDPNNTT----IFVGNLDSNVTDEH 300

Query: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360
           LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN
Sbjct: 301 LRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSN 360

Query: 361 KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYGGYGGGYGNYQQPAPQQPSQQ 420
           KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFY GYGGGYGNYQQPAPQQPSQQ
Sbjct: 361 KQPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDPNMFYSGYGGGYGNYQQPAPQQPSQQ 402

Query: 421 QGGYM 426
           QGGYM
Sbjct: 421 QGGYM 402

[Close]

BLAST of CmaCh18G002500 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 470.7 bits (1210), Expect = 2.5e-132
Identity = 264/420 (62.86%), Postives = 308/420 (73.33%), Query Frame = 0


Query: 452 QPVP-GVAPHSMPHQAPQYQQ-QQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPS-Q 511
           QP P G+ PH  P  + Q Q   Q PY +    P    P  QMW   PQA++P   PS Q
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAP----PPPQMW--NPQAAAP---PSVQ 63

Query: 512 PANADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRP 571
           P  ADE+RTLWIGDLQYWMDE++++ C AHTGE+ S KVIRNKQ GQ EGYGFIEF +  
Sbjct: 64  PTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHA 123

Query: 572 AAERVLQTYNGTPMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQE 631
           AAERVLQT+N  P+P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L E
Sbjct: 124 AAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLE 183

Query: 632 TFRARFTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAA 691
           TFRA + SVK AKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CSTRPMRIGPAA
Sbjct: 184 TFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAA 243

Query: 692 NKNTSGSQQYAKTSYQ-NPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHV 751
           +K     Q   + SYQ +  G   +NDPNNTT+FVG LD+++TDDHL++VF QYGE+VHV
Sbjct: 244 SKKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHV 303

Query: 752 KIPVGKRCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGS 811
           KIP GKRCGFVQFS+++CAEEALRMLNG Q+GG  +RLSWGRS SNKQ   DP+Q+    
Sbjct: 304 KIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQF---Y 363

Query: 812 YHGYGQGYENYSYAPAPQDPNMFYGGYSGYG----------SYQQPPPQQPQQQQGGLIF 855
           Y GYGQG E Y Y   PQDPN +YGGYSG G          + QQPP Q PQQQQ G  +
Sbjct: 364 YGGYGQGQEQYGYT-MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQQVGFSY 405

[Close]

BLAST of CmaCh18G002500 vs. TAIR 10
Match: AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 450.7 bits (1158), Expect = 2.7e-126
Identity = 247/416 (59.38%), Postives = 294/416 (70.67%), Query Frame = 0


Query: 452 QPVP-----GVAPHSMPHQAPQYQQQQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQP 511
           QP P        P  +P     Y QQQ  +MM   Q  Q QP    W QQ   SS Q Q 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQPPAG-WNQQSAPSSGQPQQ 63

Query: 512 SQ--------PANADEVRTLWIGDLQYWMDESYIFNCLAHTGEISSVKVIRNKQNGQSEG 571
            Q        P +A E+R+LWIGDLQ WMDE+Y+ N    TGE ++ KVIRNKQNG SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 572 YGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAG 631
           YGFIEF+    AER LQTYNG PMP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 632 DVTDYVLQETFRARFTSVKSAKVVIDRLTGRTKGYGFVKFGDENEQMRAMTEMNGVLCST 691
           DVTD++L ETF+A ++SVK AKVV DR TGR+KGYGFV+F DE+EQ+RAMTEMNG  CS+
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243

Query: 692 RPMRIGPAANKNTSGSQQYAKTSYQNPQGAQDENDPNNTTLFVGNLDSNITDDHLRHVFG 751
           RPMR GPAANK     Q     SYQN QG   E+DP NTT+FVG +D ++T+D L+ VFG
Sbjct: 244 RPMRTGPAANKKPLTMQ---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFG 303

Query: 752 QYGELVHVKIPVGKRCGFVQFSDRNCAEEALRMLNGSQIGGQNIRLSWGRSSSNKQPQAD 811
           Q+GELVHVKIP GKRCGFVQ+++R CAE+AL +LNG+Q+GGQ+IRLSWGRS SNKQ Q D
Sbjct: 304 QFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPD 363

Query: 812 PNQW-NGGSYHGY-GQGYENYSYAPAPQDPNMFYGGYS--GYGSYQQPPPQQPQQQ 849
             Q+  GG Y+GY  QGYE Y YAP PQDPN +YGGY+  GYG+YQQP   Q QQQ
Sbjct: 364 QAQYGGGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQQQ 415

[Close]

BLAST of CmaCh18G002500 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 425.2 bits (1092), Expect = 1.2e-118
Identity = 230/376 (61.17%), Postives = 275/376 (73.14%), Query Frame = 0


Query: 472 QQPPYMMMPPQPPQVQPSTQMWPQQPQASSPQGQPSQ-PANADEVRTLWIGDLQYWMDES 531
           QQ  +MMM  Q  Q Q         P      G  SQ P +A +V++LWIGDLQ WMDE+
Sbjct: 18  QQHLWMMMQQQQQQQQ---MQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWMDEN 77

Query: 532 YIFNCLAHTGEISSVKVIRNKQNGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFR 591
           YI +  A +GE +S KVIRNK  GQSEGYGFIEF++   AERVLQTYNG PMP+  Q FR
Sbjct: 78  YIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFR 137

Query: 592 LNW--ASAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARFTSVKSAKVVIDRLTGR 651
           LNW  A AGEKR Q + PD+TIFVGDLA +VTDY+L +TF+  + SVK AKVV+DR TGR
Sbjct: 138 LNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGR 197

Query: 652 TKGYGFVKFGDENEQMRAMTEMNGVLCSTRPMRIGPAANKNTSGSQQYAKTSYQNPQGAQ 711
           +KGYGFV+F DENEQMRAMTEMNG  CSTRPMRIGPAANKN    Q      YQN QGA 
Sbjct: 198 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ---PAMYQNTQGAN 257

Query: 712 -DENDPNNTTLFVGNLDSNITDDHLRHVFGQYGELVHVKIPVGKRCGFVQFSDRNCAEEA 771
             +NDPNNTT+FVG LD+N+TDD L+ +FGQ+GEL+HVKIP GKRCGFVQ++++  AE A
Sbjct: 258 AGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHA 317

Query: 772 LRMLNGSQIGGQNIRLSWGRSSSNKQPQADPNQWNGGSYHGY---GQGYENYSYAPAPQD 831
           L +LNG+Q+GGQ+IRLSWGRS +    Q+D  QWNGG Y+GY    QG   Y+  P  QD
Sbjct: 318 LSVLNGTQLGGQSIRLSWGRSPNK---QSDQAQWNGGGYYGYPPQPQGGYGYAAQPPTQD 377

Query: 832 PNMFYGGYSGYGSYQQ 840
           PN +YGGY+GYG+YQQ
Sbjct: 378 PNAYYGGYTGYGNYQQ 384

[Close]

BLAST of CmaCh18G002500 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 378.3 bits (970), Expect = 1.7e-104
Identity = 210/388 (54.12%), Postives = 258/388 (66.49%), Query Frame = 0


Query: 39  MWPQQPQAVSPQGQPPQPANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNK 98
           M P QP    PQG    P   +EVRTLWIGDLQYW+DENYL +CF+ TGE+ SVKVIRNK
Sbjct: 4   MHPPQP----PQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNK 63

Query: 99  QTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGE-KRQDDSPDYTIF 158
            TGQ EGYGFIEF++  AAER LQTYNGT MP     FRLNWAS G  ++ D  PD++IF
Sbjct: 64  ITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIF 123

Query: 159 VGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMN 218
           VGDLA DVTDY+LQETFR  Y+S++GAKVV D  TGR+KGYGFVKF +E+E+ RAM EMN
Sbjct: 124 VGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMN 183

Query: 219 GVLCSSRPMRIGPAANKNTSGGQQYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNEND 278
           G+ CS+RPMRI  A  K   G QQ    ++     V SA+     + +Y  P        
Sbjct: 184 GLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAV--AAPVQAYVAP-------- 243

Query: 279 PNNTTVGTSIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEAL 338
           P +    T+I V NLD NVT+E L++ FSQ GE+++VKIPA K  G+VQF  R  AEEA+
Sbjct: 244 PESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAV 303

Query: 339 RMLNGTQIGGQNIRLSWGRSPSNK--QPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDP 398
           + + G  IG Q +R+SW ++P       QADPNQWN   GYYGYGQGY+ Y+Y  A QDP
Sbjct: 304 QRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWN---GYYGYGQGYDAYAYG-ATQDP 363

Query: 399 NMF-YGGYGGGYGNYQQPAPQQPSQQQG 423
           +++ YGGYG          PQ P Q +G
Sbjct: 364 SVYAYGGYG---------YPQYPQQGEG 364

[Close]

BLAST of CmaCh18G002500 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 377.1 bits (967), Expect = 3.8e-104
Identity = 208/388 (53.61%), Postives = 257/388 (66.24%), Query Frame = 0


Query: 39  MWPQQPQAVSPQGQPPQPANADEVRTLWIGDLQYWMDENYLFNCFAHTGEVSSVKVIRNK 98
           M P QP    PQG    P   +EVRTLWIGDLQYW+DENYL +CF+ TGE+ SVKVIRNK
Sbjct: 4   MHPPQP----PQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNK 63

Query: 99  QTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPNGAQNFRLNWASAGE-KRQDDSPDYTIF 158
            TGQ EGYGFIEF++  AAER LQTYNGT MP     FRLNWAS G  ++ D  PD++IF
Sbjct: 64  ITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIF 123

Query: 159 VGDLAGDVTDYVLQETFRARYTSLKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMN 218
           VGDLA DVTDY+LQETFR  Y+S++GAKVV D  TGR+KGYGFVKF +E+E+ RAM EMN
Sbjct: 124 VGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMN 183

Query: 219 GVLCSSRPMRIGPAANKNTSGGQQYAKNRSSIFYGVHSALFTHCHLASYQNPQGTQNEND 278
           G+ CS+RPMRI  A  K   G QQ    + ++   V +       + +Y  P        
Sbjct: 184 GLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAP------VQAYVAP-------- 243

Query: 279 PNNTTVGTSIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEAL 338
           P +    T+I V NLD NVT+E L++ FSQ GE+++VKIPA K  G+VQF  R  AEEA+
Sbjct: 244 PESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAV 303

Query: 339 RMLNGTQIGGQNIRLSWGRSPSNK--QPQADPNQWNGGGGYYGYGQGYENYSYAPAAQDP 398
           + + G  IG Q +R+SW ++P       QADPNQWN   GYYGYGQGY+ Y+Y  A QDP
Sbjct: 304 QRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWN---GYYGYGQGYDAYAYG-ATQDP 360

Query: 399 NMF-YGGYGGGYGNYQQPAPQQPSQQQG 423
           +++ YGGYG          PQ P Q +G
Sbjct: 364 SVYAYGGYG---------YPQYPQQGEG 360

The following BLAST results are available for this feature:

BLAST of CmaCh18G002500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEB4	1.1e-135	63.61	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	2.5e-132	64.68	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9SAB3	3.6e-131	62.86	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]
Q93W34	3.8e-125	59.38	Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C P...	[more]
Q9FPJ8	1.7e-117	61.17	Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A P...	[more]

BLAST of CmaCh18G002500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JV34	3.0e-234	100.00	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1JV65	2.7e-230	94.35	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1GRK0	1.3e-229	94.12	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita moschata OX=366...	[more]
A0A6J1JYI0	6.5e-229	94.13	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1GRE4	3.2e-228	93.90	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita moschata OX=366...	[more]

BLAST of CmaCh18G002500 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6584082.1	0.0e+00	87.94	Polyadenylate-binding protein RBP45, partial [Cucurbita argyrosperma subsp. soro...	[more]
DAD49751.1	5.7e-243	64.08	TPA_asm: hypothetical protein HUJ06_032059 [Nelumbo nucifera]	[more]
XP_022994197.1	6.3e-234	100.00	polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita maxima]	[more]
XP_022994222.1	5.5e-230	94.35	polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita maxima]	[more]
XP_022954608.1	2.7e-229	94.12	polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita moschata] >XP_023...	[more]

BLAST of CmaCh18G002500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11650.2	2.5e-132	62.86	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G27000.1	2.7e-126	59.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	1.2e-118	61.17	RNA-binding protein 45A	[more]
AT5G19350.1	1.7e-104	54.12	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	3.8e-104	53.61	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 155..229 e-value: 9.5E-17 score: 71.6 coord: 517..592 e-value: 1.0E-11 score: 54.9 coord: 64..139 e-value: 3.3E-14 score: 63.2 coord: 608..682 e-value: 1.0E-17 score: 74.8 coord: 286..353 e-value: 9.5E-24 score: 94.9 coord: 716..783 e-value: 2.2E-22 score: 90.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 518..582 e-value: 4.0E-10 score: 39.4 coord: 717..781 e-value: 6.2E-16 score: 58.0 coord: 609..672 e-value: 1.9E-11 score: 43.6 coord: 65..129 e-value: 4.3E-12 score: 45.7 coord: 287..351 e-value: 8.6E-18 score: 63.9 coord: 156..224 e-value: 2.3E-10 score: 40.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 285..357 score: 18.205673
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 715..787 score: 17.69401
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 154..233 score: 15.732639
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 607..686 score: 16.176081
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 63..143 score: 15.869082
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 516..596 score: 14.658149
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 10..151 e-value: 6.5E-24 score: 86.4 coord: 459..606 e-value: 5.0E-22 score: 80.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 153..229 e-value: 1.8E-18 score: 68.5 coord: 607..682 e-value: 6.2E-20 score: 73.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 264..425 e-value: 4.1E-27 score: 96.9 coord: 687..818 e-value: 2.3E-27 score: 97.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 491..511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..370
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 458..511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 781..804
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 682..712
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..490
None	No IPR available	PANTHER	PTHR47640:SF48	POLYADENYLATE-BINDING PROTEIN RBP45B	coord: 467..846 coord: 17..417
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 467..846 coord: 17..417
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 153..232 e-value: 3.15879E-45 score: 154.744
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 64..142 e-value: 7.56816E-45 score: 153.958
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 714..785 e-value: 1.3101E-35 score: 127.034
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 517..595 e-value: 1.02629E-42 score: 147.794
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 606..685 e-value: 1.0031E-45 score: 156.285
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 280..355 e-value: 6.6425E-35 score: 125.108
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 699..812
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 62..236
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 515..688
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 273..383

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G002500.1	CmaCh18G002500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding