CmaCh17G013930 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGGTTATACCCTCTGCGAGTGCGTAGCCCTAGGCATGTCAAAAGTTAAAGGCTGAGATTTGTTTCTAAACAAATCCAACGGTGTTCACAGTTTCCAGCCGCTCCTTTATATTCATCCAAGACGGCGCTCTTCTCCTGTTTCCTTGCATTCATCCTACCGCCCTGTGTCTCTCGCGAACTCCCGTTGGGATTTTAGGGTTCGCGATCCAGACGGTTGCTTCTTGATCATCATGGTAAACTCCAAATTTCCCTGCTACATCTGGATTATGCCTCTTCATCTCTTCCGAATTCGGATCCTATAATTTTCACTTTCTTTCACGCTATTGACAGGTTCTTCAAAACGACATCGATTTGCTCAATCCTCCGGCCGAACTCGAGAAGAGAAAACACAAGCTCAAGCGTCTCGTACAGTCGCCCAACTCATTCTTCATGGTATGTCGATTCGTGTTCCTCCTTTTGACTTTTTTATTTTTTATTTTTTAATCAAATCGTTACTATGATAATGGTGATCGAGCTGTTCTGTTAATTCTGAATGCAGGACGTGAAGTGTCAGGGTTGCTTTAACATGTAAGTATTCATCTTTTTCATGTATTATGGTTACATGTACTTTGTGTTTTCCCTTAAGGGTTGGATATTTAGGTTGTTTATTGAGTGATGACATATAACTCTTTGAATGGAAAACAGAACGACTGTATTCAGTCATTCACAAACAGTCGTGGTATGTGGGAATTGCCAGACGGTCTTGTGCCAGCCAACTGGAGGGCGCGCTAGGCTAACAGAAGGGTGCTCCTTTAGAAGAAAGGGCGACTAAGTCCTTGTCTCAGAATTGGCTTGCAGTAGGATCAGGATGGGTGGGTTTGAATTTTGATATTGCAATTGAGCACATTTTGTCTTTGTCTCGGGTTTTCTTCGTTATGGATGTTGATTATTCAATTTTGTTTGAGAAGAAGAGCATTTAGGCACCGTTGTTGTAGTACATTGATCTTAATGTTATCCATGAAACTAAGTTTTGTTTGAAGGAATTCACATCAAGTGTTTTTGCGAGCTCCCCAATTCCTTTTAATTGATCGGTGTGTTTAGATTTGCTTGCCTTTATGCCATGAGTTATAAATTTGTATCGTATTTTTAGCTGCTTTTAATCTTTGAAGTATTAACTTGTTCTTTCTCGAATAGTTTGTCAATTGTA ATGGACGGTTATACCCTCTGCGATTTCCAGCCGCTCCTTTATATTCATCCAAGACGGCGCTCTTCTCCTGTTTCCTTGCATTCATCCTACCGCCCTGTGTCTCTCGCGAACTCCCGTTGGGATTTTAGGGTTCGCGATCCAGACGGTTGCTTCTTGATCATCATGGTTCTTCAAAACGACATCGATTTGCTCAATCCTCCGGCCGAACTCGAGAAGAGAAAACACAAGCTCAAGCGTCTCGTACAGTCGCCCAACTCATTCTTCATGGACGTGAAGTGTCAGGGTTGCTTTAACATAACGACTGTATTCAGTCATTCACAAACAGTCGTGGTATGTGGGAATTGCCAGACGGTCTTGTGCCAGCCAACTGGAGGGCGCGCTAGGCTAACAGAAGGGTGCTCCTTTAGAAGAAAGGGCGACTAAGTCCTTGTCTCAGAATTGGCTTGCAGTAGGATCAGGATGGGTGGGTTTGAATTTTGATATTGCAATTGAGCACATTTTGTCTTTGTCTCGGGTTTTCTTCGTTATGGATGTTGATTATTCAATTTTGTTTGAGAAGAAGAGCATTTAGGCACCGTTGTTGTAGTACATTGATCTTAATGTTATCCATGAAACTAAGTTTTGTTTGAAGGAATTCACATCAAGTGTTTTTGCGAGCTCCCCAATTCCTTTTAATTGATCGGTGTGTTTAGATTTGCTTGCCTTTATGCCATGAGTTATAAATTTGTATCGTATTTTTAGCTGCTTTTAATCTTTGAAGTATTAACTTGTTCTTTCTCGAATAGTTTGTCAATTGTA ATGGACGGTTATACCCTCTGCGATTTCCAGCCGCTCCTTTATATTCATCCAAGACGGCGCTCTTCTCCTGTTTCCTTGCATTCATCCTACCGCCCTGTGTCTCTCGCGAACTCCCGTTGGGATTTTAGGGTTCGCGATCCAGACGGTTGCTTCTTGATCATCATGGTTCTTCAAAACGACATCGATTTGCTCAATCCTCCGGCCGAACTCGAGAAGAGAAAACACAAGCTCAAGCGTCTCGTACAGTCGCCCAACTCATTCTTCATGGACGTGAAGTGTCAGGGTTGCTTTAACATAACGACTGTATTCAGTCATTCACAAACAGTCGTGGTATGTGGGAATTGCCAGACGGTCTTGTGCCAGCCAACTGGAGGGCGCGCTAGGCTAACAGAAGGGTGCTCCTTTAGAAGAAAGGGCGACTAA MDGYTLCDFQPLLYIHPRRRSSPVSLHSSYRPVSLANSRWDFRVRDPDGCFLIIMVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD Homology
BLAST of CmaCh17G013930 vs. ExPASy Swiss-Prot
Match: Q9M2F1 (40S ribosomal protein S27-2 OS=Arabidopsis thaliana OX=3702 GN=RPS27B PE=2 SV=2) HSP 1 Score: 179.9 bits (455), Expect = 2.0e-44 Identity = 83/86 (96.51%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy Swiss-Prot
Match: Q96564 (40S ribosomal protein S27 OS=Hordeum vulgare OX=4513 GN=RPS27 PE=3 SV=2) HSP 1 Score: 171.0 bits (432), Expect = 9.4e-42 Identity = 81/86 (94.19%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy Swiss-Prot
Match: O64650 (40S ribosomal protein S27-1 OS=Arabidopsis thaliana OX=3702 GN=RPS27A PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.1e-41 Identity = 78/84 (92.86%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy Swiss-Prot
Match: Q8L953 (40S ribosomal protein S27-3 OS=Arabidopsis thaliana OX=3702 GN=RPS27D PE=2 SV=2) HSP 1 Score: 169.5 bits (428), Expect = 2.7e-41 Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy Swiss-Prot
Match: P47903 (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii OX=3055 GN=RPS27 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 5.4e-37 Identity = 73/86 (84.88%), Postives = 77/86 (89.53%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy TrEMBL
Match: A0A6J1JM72 (40S ribosomal protein S27 OS=Cucurbita maxima OX=3661 GN=LOC111488139 PE=3 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.8e-72 Identity = 133/139 (95.68%), Postives = 134/139 (96.40%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy TrEMBL
Match: A0A6J1GP15 (40S ribosomal protein S27 OS=Cucurbita moschata OX=3662 GN=LOC111455834 PE=3 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 7.7e-71 Identity = 131/136 (96.32%), Postives = 132/136 (97.06%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy TrEMBL
Match: A0A0A0K9G0 (40S ribosomal protein S27 OS=Cucumis sativus OX=3659 GN=Csa_6G091290 PE=3 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53 Identity = 113/146 (77.40%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy TrEMBL
Match: W9RJV2 (40S ribosomal protein S27 OS=Morus notabilis OX=981085 GN=L484_005973 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 3.0e-43 Identity = 95/132 (71.97%), Postives = 101/132 (76.52%), Query Frame = 0
BLAST of CmaCh17G013930 vs. ExPASy TrEMBL
Match: A0A6J1JTM3 (40S ribosomal protein S27 OS=Cucurbita maxima OX=3661 GN=LOC111489630 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.2e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CmaCh17G013930 vs. NCBI nr
Match: XP_022991567.1 (40S ribosomal protein S27-2-like [Cucurbita maxima]) HSP 1 Score: 281.6 bits (719), Expect = 3.8e-72 Identity = 133/139 (95.68%), Postives = 134/139 (96.40%), Query Frame = 0
BLAST of CmaCh17G013930 vs. NCBI nr
Match: XP_022953224.1 (uncharacterized protein LOC111455834 [Cucurbita moschata]) HSP 1 Score: 276.2 bits (705), Expect = 1.6e-70 Identity = 131/136 (96.32%), Postives = 132/136 (97.06%), Query Frame = 0
BLAST of CmaCh17G013930 vs. NCBI nr
Match: KAF5449188.1 (hypothetical protein F2P56_029664, partial [Juglans regia]) HSP 1 Score: 185.3 bits (469), Expect = 3.7e-43 Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of CmaCh17G013930 vs. NCBI nr
Match: KAG6592828.1 (40S ribosomal protein S27-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.3 bits (469), Expect = 3.7e-43 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of CmaCh17G013930 vs. NCBI nr
Match: EXB94378.1 (40S ribosomal protein S27-2 [Morus notabilis]) HSP 1 Score: 184.5 bits (467), Expect = 6.3e-43 Identity = 95/132 (71.97%), Postives = 101/132 (76.52%), Query Frame = 0
BLAST of CmaCh17G013930 vs. TAIR 10
Match: AT3G61110.1 (ribosomal protein S27 ) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-45 Identity = 83/86 (96.51%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CmaCh17G013930 vs. TAIR 10
Match: AT2G45710.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 169.9 bits (429), Expect = 1.5e-42 Identity = 78/84 (92.86%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CmaCh17G013930 vs. TAIR 10
Match: AT5G47930.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 169.5 bits (428), Expect = 2.0e-42 Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of CmaCh17G013930 vs. TAIR 10
Match: AT3G61111.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 150.6 bits (379), Expect = 9.4e-37 Identity = 70/86 (81.40%), Postives = 76/86 (88.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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