Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAGTTAGAAGGTGAATATCTTTGGTCCTTGCTAGCTGGGGCGACGTACTCGGATGATATACTTTCACGATACTCTATGGATGTACTTGAACGGGCAGGTAAGTGTGTGAGGCCAAAAAATAATGTTATTTGTTTACAACCTATCTTCTTTTTTGAATTATATATATAAATATTTAATATGCCCATTTTAAATGGTGATTAATATAGTATTACACACTTGTACAGAATCTATGAATGCAATTTCTTTGTGGAAAGAACAAGAAATGCAACCAAATTTGGGGGATGACACCATCAACATCGACTACAAAAAATATACACTGGAAAGGATGAGTAACACTAGTAGTTCACGACTTTTATTTTAATCATGGGATAATTGTATTCAATTCAATTCATTTGTTAAATTTATTTGGCAGTAAATTTGAGAGAACAATATTTAAGGGTGGAAGATGAATATTTTTGGGTATTAGAAGAGAGACCACCAAGAACCATGCCAACACATACACTTCATTTGATGTCGACCAAATTCATTTGGAGTACGTCTGGGAGAAAGTACTACAAACATCATGTAAGTTAAGCTTGGAAATGAAATTTTATTTTGTGGATCTACAGATTCTCTTAGAGTAAAAATGATAAACTTGGAAAGTGATTGTTATTGCCTGCTACAAAAAGTTCTCGACCCACAAGAGAGAGATGCATATGCATATGAAAAGATAGGTAAACTTTATTCCACTTTTTCAATTATAATATGGTCTCAGTTCCAGTCTTTATTAATTTTGGTATATGTATTCAAGCAGTCAATGCTAGAAAACAGTTGCTGGAGATAGAAGACCAATATTTTAGTCGCTTCAAATACAACATTGCCAGAACAATTCCTCCAACCACCTCTAACCACCCCAGGTTTGAACTTACTCTATAA
mRNA sequence
ATGATGAAGTTAGAAGGTGAATATCTTTGGTCCTTGCTAGCTGGGGCGACGTACTCGGATGATATACTTTCACGATACTCTATGGATGTACTTGAACGGGCAGAATCTATGAATGCAATTTCTTTGTGGAAAGAACAAGAAATGCAACCAAATTTGGGGGATGACACCATCAACATCGACTACAAAAAATATACACTGGAAAGGATGATAAATTTGAGAGAACAATATTTAAGGGTGGAAGATGAATATTTTTGGGTATTAGAAGAGAGACCACCAAGAACCATGCCAACACATACACTTCATTTGATGTCGACCAAATTCATTTGGAATTCTCTTAGAGTAAAAATGATAAACTTGGAAAGTGATTGTTATTGCCTGCTACAAAAAGTTCTCGACCCACAAGAGAGAGATGCATATGCATATGAAAAGATAGTCAATGCTAGAAAACAGTTGCTGGAGATAGAAGACCAATATTTTAGTCGCTTCAAATACAACATTGCCAGAACAATTCCTCCAACCACCTCTAACCACCCCAGGTTTGAACTTACTCTATAA
Coding sequence (CDS)
ATGATGAAGTTAGAAGGTGAATATCTTTGGTCCTTGCTAGCTGGGGCGACGTACTCGGATGATATACTTTCACGATACTCTATGGATGTACTTGAACGGGCAGAATCTATGAATGCAATTTCTTTGTGGAAAGAACAAGAAATGCAACCAAATTTGGGGGATGACACCATCAACATCGACTACAAAAAATATACACTGGAAAGGATGATAAATTTGAGAGAACAATATTTAAGGGTGGAAGATGAATATTTTTGGGTATTAGAAGAGAGACCACCAAGAACCATGCCAACACATACACTTCATTTGATGTCGACCAAATTCATTTGGAATTCTCTTAGAGTAAAAATGATAAACTTGGAAAGTGATTGTTATTGCCTGCTACAAAAAGTTCTCGACCCACAAGAGAGAGATGCATATGCATATGAAAAGATAGTCAATGCTAGAAAACAGTTGCTGGAGATAGAAGACCAATATTTTAGTCGCTTCAAATACAACATTGCCAGAACAATTCCTCCAACCACCTCTAACCACCCCAGGTTTGAACTTACTCTATAA
Protein sequence
MMKLEGEYLWSLLAGATYSDDILSRYSMDVLERAESMNAISLWKEQEMQPNLGDDTINIDYKKYTLERMINLREQYLRVEDEYFWVLEERPPRTMPTHTLHLMSTKFIWNSLRVKMINLESDCYCLLQKVLDPQERDAYAYEKIVNARKQLLEIEDQYFSRFKYNIARTIPPTTSNHPRFELTL
Homology
BLAST of CmaCh17G012760 vs. ExPASy TrEMBL
Match:
A0A6J1GQF8 (uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 4.8e-12
Identity = 85/310 (27.42%), Postives = 118/310 (38.06%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVL-------------------ERAESMNAIS 60
MMKLE ++ L Y + L YS DVL E E MN S
Sbjct: 279 MMKLEAIFVGLLQNSTKYLVEKLLGYSKDVLGLAVSLTRELLALDELSDSELREQMNFGS 338
Query: 61 L---------------WKEQEMQPNLG-DDTINIDYKKYTLERMINLREQYLRVEDEYFW 120
L W ++++ PNL + + +Y+ YTLERM+NLREQYLRVEDEY W
Sbjct: 339 LDDIIWMLMSWRQYYSWGQRQIYPNLWLEMHTDKEYQIYTLERMVNLREQYLRVEDEYLW 398
Query: 121 VLEERPPR----TMPTHTLHLMSTKFIW-------------------------------- 180
VLEER + T + +H + ++IW
Sbjct: 399 VLEERHTKKHANTYTSFDVHQIHLEYIWEKVLQTSLNWRNDWILRLDAYTRELQKSFEHD 458
Query: 181 -----------------------------------------------------NSLRVKM 182
NSLR+KM
Sbjct: 459 VLDNEIMEELKEAERAYCDFIERRHITNLDNIPLMDVSQIYAKYNHPKLLVDINSLRLKM 518
BLAST of CmaCh17G012760 vs. ExPASy TrEMBL
Match:
A0A6J1GQA4 (uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 4.8e-12
Identity = 85/310 (27.42%), Postives = 118/310 (38.06%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVL-------------------ERAESMNAIS 60
MMKLE ++ L Y + L YS DVL E E MN S
Sbjct: 279 MMKLEAIFVGLLQNSTKYLVEKLLGYSKDVLGLAVSLTRELLALDELSDSELREQMNFGS 338
Query: 61 L---------------WKEQEMQPNLG-DDTINIDYKKYTLERMINLREQYLRVEDEYFW 120
L W ++++ PNL + + +Y+ YTLERM+NLREQYLRVEDEY W
Sbjct: 339 LDDIIWMLMSWRQYYSWGQRQIYPNLWLEMHTDKEYQIYTLERMVNLREQYLRVEDEYLW 398
Query: 121 VLEERPPR----TMPTHTLHLMSTKFIW-------------------------------- 180
VLEER + T + +H + ++IW
Sbjct: 399 VLEERHTKKHANTYTSFDVHQIHLEYIWEKVLQTSLNWRNDWILRLDAYTRELQKSFEHD 458
Query: 181 -----------------------------------------------------NSLRVKM 182
NSLR+KM
Sbjct: 459 VLDNEIMEELKEAERAYCDFIERRHITNLDNIPLMDVSQIYAKYNHPKLLVDINSLRLKM 518
BLAST of CmaCh17G012760 vs. ExPASy TrEMBL
Match:
A0A6J1GQF7 (uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 4.8e-12
Identity = 85/310 (27.42%), Postives = 118/310 (38.06%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVL-------------------ERAESMNAIS 60
MMKLE ++ L Y + L YS DVL E E MN S
Sbjct: 91 MMKLEAIFVGLLQNSTKYLVEKLLGYSKDVLGLAVSLTRELLALDELSDSELREQMNFGS 150
Query: 61 L---------------WKEQEMQPNLG-DDTINIDYKKYTLERMINLREQYLRVEDEYFW 120
L W ++++ PNL + + +Y+ YTLERM+NLREQYLRVEDEY W
Sbjct: 151 LDDIIWMLMSWRQYYSWGQRQIYPNLWLEMHTDKEYQIYTLERMVNLREQYLRVEDEYLW 210
Query: 121 VLEERPPR----TMPTHTLHLMSTKFIW-------------------------------- 180
VLEER + T + +H + ++IW
Sbjct: 211 VLEERHTKKHANTYTSFDVHQIHLEYIWEKVLQTSLNWRNDWILRLDAYTRELQKSFEHD 270
Query: 181 -----------------------------------------------------NSLRVKM 182
NSLR+KM
Sbjct: 271 VLDNEIMEELKEAERAYCDFIERRHITNLDNIPLMDVSQIYAKYNHPKLLVDINSLRLKM 330
BLAST of CmaCh17G012760 vs. ExPASy TrEMBL
Match:
A0A6J1CYL4 (uncharacterized protein LOC111015471 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015471 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 2.8e-04
Identity = 48/163 (29.45%), Postives = 72/163 (44.17%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVLERAES----------------MNAISLW- 60
+ KLEGEY+ L A ATYS LS YS VL+ A S IS++
Sbjct: 131 LTKLEGEYVALLEAEATYSYHALSTYSKHVLQSAVSRRRELLVLEEECFMPLKGRISVFD 190
Query: 61 -------------------------KEQEMQPNLGDDTINIDYKKYTLERMINLREQYLR 119
KE+ M P+ D NI YK LE M+ LRE +L
Sbjct: 191 VGSMSFGRLQEVIRMIQRMKFYPPLKEERMYPSFMQDNNNIHYKIEFLETMVRLREDFLT 250
BLAST of CmaCh17G012760 vs. ExPASy TrEMBL
Match:
A0A6J1CWM1 (uncharacterized protein LOC111015471 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015471 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 2.8e-04
Identity = 48/163 (29.45%), Postives = 72/163 (44.17%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVLERAES----------------MNAISLW- 60
+ KLEGEY+ L A ATYS LS YS VL+ A S IS++
Sbjct: 131 LTKLEGEYVALLEAEATYSYHALSTYSKHVLQSAVSRRRELLVLEEECFMPLKGRISVFD 190
Query: 61 -------------------------KEQEMQPNLGDDTINIDYKKYTLERMINLREQYLR 119
KE+ M P+ D NI YK LE M+ LRE +L
Sbjct: 191 VGSMSFGRLQEVIRMIQRMKFYPPLKEERMYPSFMQDNNNIHYKIEFLETMVRLREDFLT 250
BLAST of CmaCh17G012760 vs. NCBI nr
Match:
XP_038897352.1 (uncharacterized protein LOC120085457 isoform X1 [Benincasa hispida] >XP_038897353.1 uncharacterized protein LOC120085457 isoform X1 [Benincasa hispida] >XP_038897354.1 uncharacterized protein LOC120085457 isoform X1 [Benincasa hispida])
HSP 1 Score: 98.6 bits (244), Expect = 6.0e-17
Identity = 69/213 (32.39%), Postives = 106/213 (49.77%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVLERAE------------------------- 60
MMKLEGEY+ L AGAT+S+D+LSRYS D+L+RA
Sbjct: 241 MMKLEGEYVALLRAGATFSNDVLSRYSEDILQRAVSSKRDSLIIDELSSNEIIGERTWSL 300
Query: 61 -------------------SMNAISLWKEQEMQPNLGDDTINIDYKKYTLERMINLREQY 120
SM SLW+ +M PNL +D IDYK LE ++NLR++Y
Sbjct: 301 FDVQPIYFRRLCDVISMMLSMRFYSLWERPDMYPNLVED-FKIDYKTNRLENLVNLRKEY 360
Query: 121 LRVEDEYFWVLEERPPR----TMPTHTLHLMSTKFIWNSLRVKMINLESDCYCL---LQK 158
L VEDEY WVL+ER + T + ++H + ++++W L ++ ++D L +
Sbjct: 361 LMVEDEYLWVLQERHTKNHANTSTSFSVHQIHSEYVWEYLFDTILCWKNDLRLLEDTCAR 420
BLAST of CmaCh17G012760 vs. NCBI nr
Match:
XP_038897355.1 (uncharacterized protein LOC120085457 isoform X2 [Benincasa hispida])
HSP 1 Score: 98.6 bits (244), Expect = 6.0e-17
Identity = 69/213 (32.39%), Postives = 106/213 (49.77%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVLERAE------------------------- 60
MMKLEGEY+ L AGAT+S+D+LSRYS D+L+RA
Sbjct: 241 MMKLEGEYVALLRAGATFSNDVLSRYSEDILQRAVSSKRDSLIIDELSSNEIIGERTWSL 300
Query: 61 -------------------SMNAISLWKEQEMQPNLGDDTINIDYKKYTLERMINLREQY 120
SM SLW+ +M PNL +D IDYK LE ++NLR++Y
Sbjct: 301 FDVQPIYFRRLCDVISMMLSMRFYSLWERPDMYPNLVED-FKIDYKTNRLENLVNLRKEY 360
Query: 121 LRVEDEYFWVLEERPPR----TMPTHTLHLMSTKFIWNSLRVKMINLESDCYCL---LQK 158
L VEDEY WVL+ER + T + ++H + ++++W L ++ ++D L +
Sbjct: 361 LMVEDEYLWVLQERHTKNHANTSTSFSVHQIHSEYVWEYLFDTILCWKNDLRLLEDTCAR 420
BLAST of CmaCh17G012760 vs. NCBI nr
Match:
XP_038897359.1 (uncharacterized protein LOC120085457 isoform X5 [Benincasa hispida])
HSP 1 Score: 98.6 bits (244), Expect = 6.0e-17
Identity = 69/213 (32.39%), Postives = 106/213 (49.77%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVLERAE------------------------- 60
MMKLEGEY+ L AGAT+S+D+LSRYS D+L+RA
Sbjct: 241 MMKLEGEYVALLRAGATFSNDVLSRYSEDILQRAVSSKRDSLIIDELSSNEIIGERTWSL 300
Query: 61 -------------------SMNAISLWKEQEMQPNLGDDTINIDYKKYTLERMINLREQY 120
SM SLW+ +M PNL +D IDYK LE ++NLR++Y
Sbjct: 301 FDVQPIYFRRLCDVISMMLSMRFYSLWERPDMYPNLVED-FKIDYKTNRLENLVNLRKEY 360
Query: 121 LRVEDEYFWVLEERPPR----TMPTHTLHLMSTKFIWNSLRVKMINLESDCYCL---LQK 158
L VEDEY WVL+ER + T + ++H + ++++W L ++ ++D L +
Sbjct: 361 LMVEDEYLWVLQERHTKNHANTSTSFSVHQIHSEYVWEYLFDTILCWKNDLRLLEDTCAR 420
BLAST of CmaCh17G012760 vs. NCBI nr
Match:
XP_038897357.1 (uncharacterized protein LOC120085457 isoform X4 [Benincasa hispida])
HSP 1 Score: 98.6 bits (244), Expect = 6.0e-17
Identity = 69/213 (32.39%), Postives = 106/213 (49.77%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVLERAE------------------------- 60
MMKLEGEY+ L AGAT+S+D+LSRYS D+L+RA
Sbjct: 241 MMKLEGEYVALLRAGATFSNDVLSRYSEDILQRAVSSKRDSLIIDELSSNEIIGERTWSL 300
Query: 61 -------------------SMNAISLWKEQEMQPNLGDDTINIDYKKYTLERMINLREQY 120
SM SLW+ +M PNL +D IDYK LE ++NLR++Y
Sbjct: 301 FDVQPIYFRRLCDVISMMLSMRFYSLWERPDMYPNLVED-FKIDYKTNRLENLVNLRKEY 360
Query: 121 LRVEDEYFWVLEERPPR----TMPTHTLHLMSTKFIWNSLRVKMINLESDCYCL---LQK 158
L VEDEY WVL+ER + T + ++H + ++++W L ++ ++D L +
Sbjct: 361 LMVEDEYLWVLQERHTKNHANTSTSFSVHQIHSEYVWEYLFDTILCWKNDLRLLEDTCAR 420
BLAST of CmaCh17G012760 vs. NCBI nr
Match:
XP_038897356.1 (uncharacterized protein LOC120085457 isoform X3 [Benincasa hispida])
HSP 1 Score: 98.6 bits (244), Expect = 6.0e-17
Identity = 69/213 (32.39%), Postives = 106/213 (49.77%), Query Frame = 0
Query: 1 MMKLEGEYLWSLLAGATYSDDILSRYSMDVLERAE------------------------- 60
MMKLEGEY+ L AGAT+S+D+LSRYS D+L+RA
Sbjct: 241 MMKLEGEYVALLRAGATFSNDVLSRYSEDILQRAVSSKRDSLIIDELSSNEIIGERTWSL 300
Query: 61 -------------------SMNAISLWKEQEMQPNLGDDTINIDYKKYTLERMINLREQY 120
SM SLW+ +M PNL +D IDYK LE ++NLR++Y
Sbjct: 301 FDVQPIYFRRLCDVISMMLSMRFYSLWERPDMYPNLVED-FKIDYKTNRLENLVNLRKEY 360
Query: 121 LRVEDEYFWVLEERPPR----TMPTHTLHLMSTKFIWNSLRVKMINLESDCYCL---LQK 158
L VEDEY WVL+ER + T + ++H + ++++W L ++ ++D L +
Sbjct: 361 LMVEDEYLWVLQERHTKNHANTSTSFSVHQIHSEYVWEYLFDTILCWKNDLRLLEDTCAR 420
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GQF8 | 4.8e-12 | 27.42 | uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1GQA4 | 4.8e-12 | 27.42 | uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1GQF7 | 4.8e-12 | 27.42 | uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1CYL4 | 2.8e-04 | 29.45 | uncharacterized protein LOC111015471 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
| A0A6J1CWM1 | 2.8e-04 | 29.45 | uncharacterized protein LOC111015471 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038897352.1 | 6.0e-17 | 32.39 | uncharacterized protein LOC120085457 isoform X1 [Benincasa hispida] >XP_03889735... | [more] |
| XP_038897355.1 | 6.0e-17 | 32.39 | uncharacterized protein LOC120085457 isoform X2 [Benincasa hispida] | [more] |
| XP_038897359.1 | 6.0e-17 | 32.39 | uncharacterized protein LOC120085457 isoform X5 [Benincasa hispida] | [more] |
| XP_038897357.1 | 6.0e-17 | 32.39 | uncharacterized protein LOC120085457 isoform X4 [Benincasa hispida] | [more] |
| XP_038897356.1 | 6.0e-17 | 32.39 | uncharacterized protein LOC120085457 isoform X3 [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
