CmaCh17G008200 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh17G008200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionthionin-like protein 2
LocationCma_Chr17: 6438565 .. 6442664 (-)
RNA-Seq ExpressionCmaCh17G008200
SyntenyCmaCh17G008200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCAAAAAGACAACCCAAAGCCAAGTTTCCAAGAAGTTTGGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCGCCAATTGCTACATCGGCTGCATTAGTAGCTGCCTAGACAGTACCTTCCAGTGCGCTTTGTGCATTGGAAAATGCATGATAAGCGTCGAGTCCTCCCCGACGCAGGCCATCCATATGGACAATCGTTACTTCTGCAAGCTTGGCTGTTCCACTTCTCGCTGCTCCAAGCTCCTCCTTAACAACCATCCAAGTGAGCTTCATTATTTATTTATTTTTTTTTATTATTATTATTATTATTATTTAAATCTTATTTATGTATATTCTTTATTTTGAACGTCTCAGATGAGAAGCAAATGAAAGGCTGTGTCAACTCGTGCTCGCATACATGCACGAACACCATGAACTAATAAGATCTACGTGACATGACATGACGAGCTAGAACTTGGCTTTATGATACTATAAATAAATAAATAAACGTCAATATTGGTATTACAAATCCAAATTGACTATAAGTTATGTTATGTATTAAAGTTTGTACTTATATCTATCAATAATATTTATGTGAAATAAATAAAGTTGCTTACGTGAGAATGGTTTACGAAGCTAATTTTATTGATATTAAAACGTAACTTAATTAGTAAAGATAAATATCTCGATATCAAGAAATTCAGATGATTGTTTCACACGAGTCAAAAGGTTTAATTATTTTTAGGTCATCTCAAATGTCGTTCCATTCGGCAAGTGCTTATTTAAAAAAATTTCAAAACTAAAAATTTGTAATTTTTTCGTGAGGTCACCCATATAAAATTGCTCCAAGCAAAACACTTTTAACTATGAAATTCTTATGATTGAACAACTGAAAAAGAAAGTGCATATTGTTGATATATGTAGAAACTTTTATTTCCCTTAAGATTTTCTTAGTCATTCTATCCTCAAAATCGTTCATTCAAATGTGATTTCAGTTCATTCATGTAACTCTCCTTTACTCGAGTGCCACAATATTTATGGGTATAATCAGCACTCTTAGGACTATTAGATGTCGTTGAATTCAAGTTTTAAATCTTGGTCTGATCCTAAGTGGGAATGTTTGCTTAATCCACCACACCTCAATGGTCCTCAATGATCTGAAAGTTATCTTATTTGTAATCAAATAAATTACAAGAATATCTCTAATAAAATATCAAATATGATATATATGGTAAACTATAATTTAATACTAAATATCCTTAACACTAAGCATGAAGCACTATAAATAATATAAGAACATAACCTCTCATTATAGGATGTTGTTCAAGAACGAACCAAAACAGAAGTCGGTTGGCATGTGATGCTCGAGTAAGAAAGTGGTACATGAATGAAATTAGATCACATTTGAATAAGAGTAATCCCGAGAATATAATAATAAAAAATGACTTTAATTACTACCTAAACAAACAAATTTCACTTTTTTTAACCTCTCCTCTGGACATCTAATGTTTTAGTACAGAAAAGATACATGAATGAACCGATATCAAATTCGAATGCGAGTAATCCTAATAATTAAGAAAATTTTAAAAGAAATTTTAAATACATTTAACTGTAACGTTCTTATGATCGACTATACAAAAAATATATATATTTCATTGATATTGACAATAACTATTATATATTTTAGAACTGTTTTTAAGAATAAATATTATTTTCCTGTGATATTGGTTCATTCATATTTACGGATCGAAAGCAATCATTTTAATCAATTTTCATAATAATTAATTTTTTATAATTTAAAGTTGGAGTAAGGCTTTGGTTGGTAAATGGTTAATAATTAAAATACAAAAGTGTAATAATCCAAAATTAAAACGAAAAAAAAAAAAAAAAATTGTCACGTTTGTAAGGCAACTTGCATTCATTCAACTAGTTTCCAACTCTTCAATATAATATATTTAATTGCTATTGAAATATAATTTAATTAATATAAATTCTATATTTATCCTAAAGATAAGACCACATTTAAATCTGTGTATAAGATAATTGTTTCACCCGAGTCAAAAGGTTTAATCATTTTTAGGCCACCTCAAAAGTCGTTCCACTTAGCAAAGGCTTATTTAAGAAAAGTAAATCTCGAAAAAATGAATTACCACATAAATACATTTGATATCTCTCGAAATTTAGAGATTAAATTAGGGTTTGTGACACCATTTTCTCAGTTTTATGTACACCATTCAAAATGTAGTGTCACGATAATCAATTAGTGAAAGTAAATTGAAAAGACATAACTAAAAATATTATTTTATTTATTTTTATAATTAAGTGTGGTAAGAACATGAATGAATTGAGAGACCAAACATGTGAATCTGAATAAGAGTTATTTTGAGAATATGATAAAAAAAAAATCAAAATTAATAAATAAATTATTTATGAAATAAAAATAAAAAGTAAAAATCAATTATTTATGAAATAAGACCTAAGTAATTATTTGATTTGTAGAGATTTTGATGGAAAAATTATTTAAAGATATTTTCTTTTTGTAAATTAAAAAAAAAAAAAAAAAAAAAAAAAGGNAAACTCAAGGTATTAATTTTGAATAATAAAATATTTCTTAGTCACTTAATTATAAAATAATTAAAGTAGAATCATATAAATATTGCGGAATAGAAAATTATAGAAACACTTCTAGACAAAGTAAATAACATGATCGAGCTATGAAATGTTGAATTCAGATCTAATTCCTAGTTCAAATCCTAGACACAGATGTTATAGATGCTGAATTTAGATTTTAGCAGGTGTGGATAGTTTTTTGTAAGAGCCCAAACCCATCGCTAGTTGATATTATCCACTTTGACTCATTACGTATCGCTGTCAACCTCACAGTTTTTAAAACACGTTACTAAGGAAAGGTTTCCACACCCTTATAAGGAATTCTTCATTACTCTCTCCAACCGACGTGTGATCTCACATCTTCACGCTGAAAAATACTTATAAGACAAGTACGTAACTTGATCAAACCATCAAATGATGAATTCATATTCCAAATCTTAGTCTGAATCCTAGGCATGAGCATTATTACATATGACATCAAAGCATAATCTCTCTATGTAGGAAGTGATTTAGAATGAACCAAGCGAGAAGCTGGTAGACACGTGACACTTGAATAAAGAAAGTGTACATAAATTAACCGAGAACACATTTGAATTAAAGAAACTTTACTACAAAGACCACGTGGATAATCACTAAAATCTAAACTTTGGTGGACACATCCAAGTAATGAACCATGGTTAGTGAGTGTGTTGGGTTTAATCATTTGTAGGCACCTTCAAATGGTTATTTAAGAAGCTGATGGTTCGTTCCCATCCCCAACGACCCAGAAACAAACTAAATCGAGTTCCAAGAAGCTTGGAAGATGAAAGTCAGTGTTGTAATATGTTTGGTTTTGAGCATAGTTATGGGCACCGGTAGCTCCCCAACACTTGGGCATGCCGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGCTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACTTCAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCACTGCACTAGGCTCCTCTCCAACGCTCGAACAGGTCAAGCTACTCGATCTCTTCAAAATTTTAATTCTATTTTTCGTTAATATATATGTTTAGGTACGTAAACATATACGTGTATGTGCCCATGTGTCTAAATATGCTAATAAAATTTTGTTGTAAACGTGACAGATGGGAAGAAAGTCGAAGGATGTGTTGACTCGTGCTCTCGAACATGCTCCAATGTGAAGAATTAATGAAGGAAGACGAAATTACGTGGAATTAAATGAATAAATAAATGTCAAATATTGGTGATAATAAACCATTTGACTATGAAGCTAAATCCTAGATTAAGTTAAGGTGTGTATTATTAGTATTATAAGTAAATAAATAAAAATAAGAATATCCATGAAAATTATATTATGAC

mRNA sequence

AACTCAAAAAGACAACCCAAAGCCAAGTTTCCAAGAAGTTTGGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCGCCAATTGCTACATCGGCTGCATTAGTAGCTGCCTAGACAGTACCTTCCAGTGCGCTTTGTGCATTGGAAAATGCATGATAAGCGTCGAGTCCTCCCCGACGCAGGCCATCCATATGGACAATCGTTACTTCTGCAAGCTTGGCTGTTCCACTTCTCGCTGCTCCAAGCTCCTCCTTAACAACCATCCAATTATGGGCACCGGTAGCTCCCCAACACTTGGGCATGCCGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGCTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACTTCAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCACTGCACTAGGCTCCTCTCCAACGCTCGAACAGATGGGAAGAAAGTCGAAGGATGTGTTGACTCGTGCTCTCGAACATGCTCCAATGTGAAGAATTAATGAAGGAAGACGAAATTACGTGGAATTAAATGAATAAATAAATGTCAAATATTGGTGATAATAAACCATTTGACTATGAAGCTAAATCCTAGATTAAGTTAAGGTGTGTATTATTAGTATTATAAGTAAATAAATAAAAATAAGAATATCCATGAAAATTATATTATGAC

Coding sequence (CDS)

ATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCGCCAATTGCTACATCGGCTGCATTAGTAGCTGCCTAGACAGTACCTTCCAGTGCGCTTTGTGCATTGGAAAATGCATGATAAGCGTCGAGTCCTCCCCGACGCAGGCCATCCATATGGACAATCGTTACTTCTGCAAGCTTGGCTGTTCCACTTCTCGCTGCTCCAAGCTCCTCCTTAACAACCATCCAATTATGGGCACCGGTAGCTCCCCAACACTTGGGCATGCCGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGCTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACTTCAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCACTGCACTAGGCTCCTCTCCAACGCTCGAACAGATGGGAAGAAAGTCGAAGGATGTGTTGACTCGTGCTCTCGAACATGCTCCAATGTGAAGAATTAA

Protein sequence

MKTVLVACLVLSFVVVGISEPTEYVGGANCYIGCISSCLDSTFQCALCIGKCMISVESSPTQAIHMDNRYFCKLGCSTSRCSKLLLNNHPIMGTGSSPTLGHADLSSNPYCYAFCVLPCFTGPVECALCIGKCILSAQDSPMDINHFNNAYFCKLGCATSHCTRLLSNARTDGKKVEGCVDSCSRTCSNVKN
Homology
BLAST of CmaCh17G008200 vs. ExPASy Swiss-Prot
Match: A8MRP4 (Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-08
Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 0

Query: 111 CYAFCVLPCFTGP-----VECAL-CIGKCILSAQDSPMDINHFN---NAYFCKLGCATSH 170
           CY  C++ C  G      ++C   C  +C+   Q SP  ++  N   + YFCKLGCAT H
Sbjct: 28  CYPACLVECKAGSKFPKYLKCPFTCTKECL--QQPSPPSVSSNNIDESDYFCKLGCATYH 87

Query: 171 CTRLLSNARTDGKKVEGCVDSCSRTCS 189
           C  L S    + ++V  CVDSCS  C+
Sbjct: 88  CVSLSSIQNPNVERVSACVDSCSNKCT 112

BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A061GC54 (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao OX=3641 GN=TCM_028663 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.3e-17
Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 0

Query: 1   MKTVLVACLVLSFVVVGISEPTEYVGGANCYIGCISSCLDSTFQCAL-CIGKCMISVESS 60
           +  VL+ CLVL  +V   +     +  A C+I C++    +TF CA  C+  C++     
Sbjct: 6   VSAVLMVCLVLGTLVGQSTAQGTILCYAACFIPCMADSTTTTFYCAAKCLKDCIL---PK 65

Query: 61  PTQAIHMDNRYFCKLGCSTSRCSKLLLNNHPIMGTGSSPTLGHADLSSNPYCYAFCVLPC 120
            T     D +YFCKLGC+T+ C+ +     P    G S   G     +N  CYA C +PC
Sbjct: 66  STVGGIKDTQYFCKLGCATALCTNISTKEDP----GQSTAQG-----TNVLCYAACFIPC 125

Query: 121 FTGP----VECAL-CIGKCILSAQDSPMDINHFNNAYFCKLGCATSHCTRLLSNARTDGK 180
              P      C + C+  CIL  + +   I   +  YFCKLGCAT+ CT + +      K
Sbjct: 126 MADPNTTTFYCTIKCLKNCIL-PKSTVGGIK--DTQYFCKLGCATALCTNISTKEDPGEK 184

Query: 181 KVEGCVDSCSRTCS 189
           KV  CVD+CS TC+
Sbjct: 186 KVGSCVDACSATCA 184

BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A1S3CDB8 (beta-hordothionin-like OS=Cucumis melo OX=3656 GN=LOC103499744 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.5e-12
Identity = 50/134 (37.31%), Postives = 70/134 (52.24%), Query Frame = 0

Query: 1   MKTVLVACLVLSFVVVGISEPTEYV------------GGANCYIGC-ISSCLDSTFQCAL 60
           MK++ V CL+LS +VVG SEP   V            G + CYI C ++ C    FQCA+
Sbjct: 1   MKSIFVLCLILSLLVVGKSEPENDVGSGSGSGNGNDNGSSGCYISCLLNDCRKGVFQCAV 60

Query: 61  CIGKC-MISVESS-PTQAIHMDNRYFCKLGCSTSRCSKLLLNNHPIMGTGSSPTLGHADL 120
           C+GKC ++  ESS  +++  MDN  FCK+GC+TS C+K  L N+            H+D 
Sbjct: 61  CLGKCAVVGAESSYSSRSNRMDNHDFCKIGCTTSLCTKFALPNNQ-----------HSDE 120

BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A6J1KDK0 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11
Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 0

Query: 111 CYAFCVLPCFTGP-VECALCIGKCI---LSAQDSPMDINHFNNAYFCKLGCATSHCTRLL 170
           CYA C + C   P V    C GKC+   L    +P D+NH +  YFCKLGCATS CT+  
Sbjct: 60  CYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFS 119

Query: 171 SNARTDGKKVEGCVDSCSRTC 188
           +      KKVE CV+SCSRTC
Sbjct: 120 TKTDPAEKKVESCVNSCSRTC 140

BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A1R3H8D4 (Peptidase C13, legumain OS=Corchorus capsularis OX=210143 GN=CCACVL1_21059 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 0

Query: 77  STSRCSKLLLNNHPIMGTGSSPTLGHADLSSNPYCYAFCVLPCF---TGPVECAL-CIGK 136
           S SRCS L +    +   G S   G  D +S   CYA C + C+   T P  CA+ C+ K
Sbjct: 428 SRSRCS-LDVQVRALAKVGKSK--GDIDENSFVGCYALCYILCYTPQTPPFSCAVKCLAK 487

Query: 137 CILSAQ-DSPMDINHFNNAYFCKLGCATSHCTRLLSNARTDGKKVEGCVDSCSRTCS 189
           CI   +  +P+   H    Y+C LGCATS C  L +N    G+KV  CVDSCSRTC+
Sbjct: 488 CIFQPKTPTPLQQTH----YYCNLGCATSMCANLSTNQNPGGEKVGSCVDSCSRTCT 537

BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A2U1N652 (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA300800 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-10
Identity = 45/132 (34.09%), Postives = 58/132 (43.94%), Query Frame = 0

Query: 65  HMDNRYFCKLGCSTSRCSKLLLNNHPIMGTGSSPTLGHADLSSNPY--CYAFCVLPCFTG 124
           H  N  FCKLGC+ S C+ +    +P  G   S     A  +  P+  CY  C   C   
Sbjct: 6   HSQNLGFCKLGCANSLCANIGTRENPGQGANGS----SAAPTPVPFTDCYGRCFFFCIIV 65

Query: 125 PVECALCIGKCILSAQDSP------MDINHFNNAYFCKLGCATSHCTRLLSNARTDGKKV 184
           P     C   C+    D+P      +D +H  N  FCKLGCA S C  + +    D   +
Sbjct: 66  PTNACSCTSTCLKKCLDTPPMTTMALD-DHSQNLGFCKLGCANSLCANIGTRENPDEHGM 125

Query: 185 EGCVDSCSRTCS 189
             CVDSCS  CS
Sbjct: 126 GRCVDSCSNKCS 132

BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG7014099.1 (hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.5 bits (415), Expect = 9.2e-37
Identity = 79/90 (87.78%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1   MKTVLVACLVLSFVVVGISEPTEYVGGANCYIGCISSCLDSTFQCALCIGKCMISVESSP 60
           MKTVLVACLVLSFVVVGISEPTEYVGG NCY GCI+SCL+S FQCA+CIGKCMISVES+P
Sbjct: 115 MKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTP 174

Query: 61  TQAIHMDNRYFCKLGCSTSRCSKLLLNNHP 91
            QA HMDNRYFCKLGCSTSRC+KLLL NHP
Sbjct: 175 MQANHMDNRYFCKLGCSTSRCAKLLL-NHP 203

BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG6575553.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.9 bits (411), Expect = 2.7e-36
Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 0

Query: 1  MKTVLVACLVLSFVVVGISEPTEYVGGANCYIGCISSCLDSTFQCALCIGKCMISVESSP 60
          MKTVLVACLVLSFVVVGISEPTEYVGG NCY GCI+SC +S FQCA+CIGKCMISVES+P
Sbjct: 1  MKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCFESAFQCAICIGKCMISVESTP 60

Query: 61 TQAIHMDNRYFCKLGCSTSRCSKLLLNNHP 91
           QA HMDNRYFCKLGCSTSRC+KLLL NHP
Sbjct: 61 MQANHMDNRYFCKLGCSTSRCAKLLL-NHP 89

BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG6575557.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.9 bits (346), Expect = 9.3e-29
Identity = 67/99 (67.68%), Postives = 74/99 (74.75%), Query Frame = 0

Query: 92  MGTGSSPTLGHADLSSNP---YCYAFCVLPCFTGPVECALCIGKCILSAQDSPMDINHFN 151
           MGTGSS  LG  +LS NP   YCYA C L C +GP+ECALCIG C++SAQDSPMDINH N
Sbjct: 1   MGTGSSQHLGMPELSRNPSNGYCYALCGLACLSGPIECALCIGSCMISAQDSPMDINHLN 60

Query: 152 NAYFCKLGCATSHCTRLLSNARTDGKKVEGCVDSCSRTC 188
           NAYFCKLGCATS CTRLLSNART G  +  C  +C   C
Sbjct: 61  NAYFCKLGCATSRCTRLLSNART-GITLGTCGATCLAKC 98

BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG6575558.1 (hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-28
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 17  GISEPTEYVGGANCYIGCISSCLDSTFQCALCIGKCMISVESSPTQAIHMDNRYFCKLGC 76
           GISEPTEYVGG NCY GCI+SC +S FQCA+CIGKCMISVES+P QA HMDNRYFCKLGC
Sbjct: 102 GISEPTEYVGGPNCYFGCINSCFESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGC 161

Query: 77  STSRCSKLLLNNHP 91
           STSRC+KLLL NHP
Sbjct: 162 STSRCAKLLL-NHP 174

BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG6575552.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-28
Identity = 66/102 (64.71%), Postives = 72/102 (70.59%), Query Frame = 0

Query: 92  MGTGSSPTLGHADLSSNP---YCYAFCVLPCFTGPVECALCIGKCILSAQDSPMDINHFN 151
           MGTGSS  LG  +LS NP   YCYA C L C +GP+ECALCIG C++SAQDSPMDINH N
Sbjct: 1   MGTGSSQHLGMPELSRNPSNGYCYALCGLACLSGPIECALCIGSCMISAQDSPMDINHLN 60

Query: 152 NAYFCKLGCATSHCTRLLSNART--DGKKVEGCVDSCSRTCS 189
           NAYFCKLGCATS CTRLLSNART         C   C   C+
Sbjct: 61  NAYFCKLGCATSRCTRLLSNARTGRSTASFRKCYAKCFIACA 102

BLAST of CmaCh17G008200 vs. TAIR 10
Match: AT1G12672.2 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1). )

HSP 1 Score: 61.6 bits (148), Expect = 7.9e-10
Identity = 33/70 (47.14%), Postives = 39/70 (55.71%), Query Frame = 0

Query: 123 PVECALCIGKCI---LSAQDSPMDINHFNNAYFCKLGCATSHCTRLLSNARTDGKKVEGC 182
           P +   CI  C+    S  DS  +INH  N Y+CKLGC+T HC  L S    +  KV  C
Sbjct: 35  PFKTFSCIKTCLEPPSSQMDSTNEINH--NDYYCKLGCSTHHCASLSSIQNPNVDKVVDC 94

Query: 183 VDSCSRTCSN 190
           VDSCS  CSN
Sbjct: 95  VDSCSDKCSN 102

BLAST of CmaCh17G008200 vs. TAIR 10
Match: AT1G12672.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0

Query: 134 ILSAQDSPMDINHFNNAYFCKLGCATSHCTRLLSNARTDGKKVEGCVDSCSRTCSN 190
           +++  DS  +INH  N Y+CKLGC+T HC  L S    +  KV  CVDSCS  CSN
Sbjct: 11  LVTQMDSTNEINH--NDYYCKLGCSTHHCASLSSIQNPNVDKVVDCVDSCSDKCSN 64

BLAST of CmaCh17G008200 vs. TAIR 10
Match: AT1G12663.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. )

HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09
Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 0

Query: 111 CYAFCVLPCFTGP-----VECAL-CIGKCILSAQDSPMDINHFN---NAYFCKLGCATSH 170
           CY  C++ C  G      ++C   C  +C+   Q SP  ++  N   + YFCKLGCAT H
Sbjct: 28  CYPACLVECKAGSKFPKYLKCPFTCTKECL--QQPSPPSVSSNNIDESDYFCKLGCATYH 87

Query: 171 CTRLLSNARTDGKKVEGCVDSCSRTCS 189
           C  L S    + ++V  CVDSCS  C+
Sbjct: 88  CVSLSSIQNPNVERVSACVDSCSNKCT 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A8MRP47.2e-0837.93Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A061GC542.3e-1734.54To encode a PR protein, Belongs to the plant thionin family with the following m... [more]
A0A1S3CDB88.5e-1237.31beta-hordothionin-like OS=Cucumis melo OX=3656 GN=LOC103499744 PE=4 SV=1[more]
A0A6J1KDK01.1e-1149.38thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1[more]
A0A1R3H8D43.2e-1141.88Peptidase C13, legumain OS=Corchorus capsularis OX=210143 GN=CCACVL1_21059 PE=3 ... [more]
A0A2U1N6522.1e-1034.09Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA300800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG7014099.19.2e-3787.78hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575553.12.7e-3686.67Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6575557.19.3e-2967.68Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6575558.11.2e-2883.78hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575552.13.5e-2864.71Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
AT1G12672.27.9e-1047.14unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT1G12672.15.1e-0950.00unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT1G12663.15.1e-0937.93Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant t... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038975Thionin-like proteinPANTHERPTHR36312THIONIN-LIKE PROTEIN 1coord: 108..189
IPR038975Thionin-like proteinPANTHERPTHR36312THIONIN-LIKE PROTEIN 1coord: 2..90
NoneNo IPR availablePANTHERPTHR36312:SF1THIONIN-LIKE PROTEIN 1coord: 2..90
coord: 108..189

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G008200.1CmaCh17G008200.1mRNA