CmaCh17G008200 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTCAAAAAGACAACCCAAAGCCAAGTTTCCAAGAAGTTTGGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCGCCAATTGCTACATCGGCTGCATTAGTAGCTGCCTAGACAGTACCTTCCAGTGCGCTTTGTGCATTGGAAAATGCATGATAAGCGTCGAGTCCTCCCCGACGCAGGCCATCCATATGGACAATCGTTACTTCTGCAAGCTTGGCTGTTCCACTTCTCGCTGCTCCAAGCTCCTCCTTAACAACCATCCAAGTGAGCTTCATTATTTATTTATTTTTTTTTATTATTATTATTATTATTATTTAAATCTTATTTATGTATATTCTTTATTTTGAACGTCTCAGATGAGAAGCAAATGAAAGGCTGTGTCAACTCGTGCTCGCATACATGCACGAACACCATGAACTAATAAGATCTACGTGACATGACATGACGAGCTAGAACTTGGCTTTATGATACTATAAATAAATAAATAAACGTCAATATTGGTATTACAAATCCAAATTGACTATAAGTTATGTTATGTATTAAAGTTTGTACTTATATCTATCAATAATATTTATGTGAAATAAATAAAGTTGCTTACGTGAGAATGGTTTACGAAGCTAATTTTATTGATATTAAAACGTAACTTAATTAGTAAAGATAAATATCTCGATATCAAGAAATTCAGATGATTGTTTCACACGAGTCAAAAGGTTTAATTATTTTTAGGTCATCTCAAATGTCGTTCCATTCGGCAAGTGCTTATTTAAAAAAATTTCAAAACTAAAAATTTGTAATTTTTTCGTGAGGTCACCCATATAAAATTGCTCCAAGCAAAACACTTTTAACTATGAAATTCTTATGATTGAACAACTGAAAAAGAAAGTGCATATTGTTGATATATGTAGAAACTTTTATTTCCCTTAAGATTTTCTTAGTCATTCTATCCTCAAAATCGTTCATTCAAATGTGATTTCAGTTCATTCATGTAACTCTCCTTTACTCGAGTGCCACAATATTTATGGGTATAATCAGCACTCTTAGGACTATTAGATGTCGTTGAATTCAAGTTTTAAATCTTGGTCTGATCCTAAGTGGGAATGTTTGCTTAATCCACCACACCTCAATGGTCCTCAATGATCTGAAAGTTATCTTATTTGTAATCAAATAAATTACAAGAATATCTCTAATAAAATATCAAATATGATATATATGGTAAACTATAATTTAATACTAAATATCCTTAACACTAAGCATGAAGCACTATAAATAATATAAGAACATAACCTCTCATTATAGGATGTTGTTCAAGAACGAACCAAAACAGAAGTCGGTTGGCATGTGATGCTCGAGTAAGAAAGTGGTACATGAATGAAATTAGATCACATTTGAATAAGAGTAATCCCGAGAATATAATAATAAAAAATGACTTTAATTACTACCTAAACAAACAAATTTCACTTTTTTTAACCTCTCCTCTGGACATCTAATGTTTTAGTACAGAAAAGATACATGAATGAACCGATATCAAATTCGAATGCGAGTAATCCTAATAATTAAGAAAATTTTAAAAGAAATTTTAAATACATTTAACTGTAACGTTCTTATGATCGACTATACAAAAAATATATATATTTCATTGATATTGACAATAACTATTATATATTTTAGAACTGTTTTTAAGAATAAATATTATTTTCCTGTGATATTGGTTCATTCATATTTACGGATCGAAAGCAATCATTTTAATCAATTTTCATAATAATTAATTTTTTATAATTTAAAGTTGGAGTAAGGCTTTGGTTGGTAAATGGTTAATAATTAAAATACAAAAGTGTAATAATCCAAAATTAAAACGAAAAAAAAAAAAAAAAATTGTCACGTTTGTAAGGCAACTTGCATTCATTCAACTAGTTTCCAACTCTTCAATATAATATATTTAATTGCTATTGAAATATAATTTAATTAATATAAATTCTATATTTATCCTAAAGATAAGACCACATTTAAATCTGTGTATAAGATAATTGTTTCACCCGAGTCAAAAGGTTTAATCATTTTTAGGCCACCTCAAAAGTCGTTCCACTTAGCAAAGGCTTATTTAAGAAAAGTAAATCTCGAAAAAATGAATTACCACATAAATACATTTGATATCTCTCGAAATTTAGAGATTAAATTAGGGTTTGTGACACCATTTTCTCAGTTTTATGTACACCATTCAAAATGTAGTGTCACGATAATCAATTAGTGAAAGTAAATTGAAAAGACATAACTAAAAATATTATTTTATTTATTTTTATAATTAAGTGTGGTAAGAACATGAATGAATTGAGAGACCAAACATGTGAATCTGAATAAGAGTTATTTTGAGAATATGATAAAAAAAAAATCAAAATTAATAAATAAATTATTTATGAAATAAAAATAAAAAGTAAAAATCAATTATTTATGAAATAAGACCTAAGTAATTATTTGATTTGTAGAGATTTTGATGGAAAAATTATTTAAAGATATTTTCTTTTTGTAAATTAAAAAAAAAAAAAAAAAAAAAAAAAGGNAAACTCAAGGTATTAATTTTGAATAATAAAATATTTCTTAGTCACTTAATTATAAAATAATTAAAGTAGAATCATATAAATATTGCGGAATAGAAAATTATAGAAACACTTCTAGACAAAGTAAATAACATGATCGAGCTATGAAATGTTGAATTCAGATCTAATTCCTAGTTCAAATCCTAGACACAGATGTTATAGATGCTGAATTTAGATTTTAGCAGGTGTGGATAGTTTTTTGTAAGAGCCCAAACCCATCGCTAGTTGATATTATCCACTTTGACTCATTACGTATCGCTGTCAACCTCACAGTTTTTAAAACACGTTACTAAGGAAAGGTTTCCACACCCTTATAAGGAATTCTTCATTACTCTCTCCAACCGACGTGTGATCTCACATCTTCACGCTGAAAAATACTTATAAGACAAGTACGTAACTTGATCAAACCATCAAATGATGAATTCATATTCCAAATCTTAGTCTGAATCCTAGGCATGAGCATTATTACATATGACATCAAAGCATAATCTCTCTATGTAGGAAGTGATTTAGAATGAACCAAGCGAGAAGCTGGTAGACACGTGACACTTGAATAAAGAAAGTGTACATAAATTAACCGAGAACACATTTGAATTAAAGAAACTTTACTACAAAGACCACGTGGATAATCACTAAAATCTAAACTTTGGTGGACACATCCAAGTAATGAACCATGGTTAGTGAGTGTGTTGGGTTTAATCATTTGTAGGCACCTTCAAATGGTTATTTAAGAAGCTGATGGTTCGTTCCCATCCCCAACGACCCAGAAACAAACTAAATCGAGTTCCAAGAAGCTTGGAAGATGAAAGTCAGTGTTGTAATATGTTTGGTTTTGAGCATAGTTATGGGCACCGGTAGCTCCCCAACACTTGGGCATGCCGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGCTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACTTCAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCACTGCACTAGGCTCCTCTCCAACGCTCGAACAGGTCAAGCTACTCGATCTCTTCAAAATTTTAATTCTATTTTTCGTTAATATATATGTTTAGGTACGTAAACATATACGTGTATGTGCCCATGTGTCTAAATATGCTAATAAAATTTTGTTGTAAACGTGACAGATGGGAAGAAAGTCGAAGGATGTGTTGACTCGTGCTCTCGAACATGCTCCAATGTGAAGAATTAATGAAGGAAGACGAAATTACGTGGAATTAAATGAATAAATAAATGTCAAATATTGGTGATAATAAACCATTTGACTATGAAGCTAAATCCTAGATTAAGTTAAGGTGTGTATTATTAGTATTATAAGTAAATAAATAAAAATAAGAATATCCATGAAAATTATATTATGAC AACTCAAAAAGACAACCCAAAGCCAAGTTTCCAAGAAGTTTGGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCGCCAATTGCTACATCGGCTGCATTAGTAGCTGCCTAGACAGTACCTTCCAGTGCGCTTTGTGCATTGGAAAATGCATGATAAGCGTCGAGTCCTCCCCGACGCAGGCCATCCATATGGACAATCGTTACTTCTGCAAGCTTGGCTGTTCCACTTCTCGCTGCTCCAAGCTCCTCCTTAACAACCATCCAATTATGGGCACCGGTAGCTCCCCAACACTTGGGCATGCCGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGCTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACTTCAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCACTGCACTAGGCTCCTCTCCAACGCTCGAACAGATGGGAAGAAAGTCGAAGGATGTGTTGACTCGTGCTCTCGAACATGCTCCAATGTGAAGAATTAATGAAGGAAGACGAAATTACGTGGAATTAAATGAATAAATAAATGTCAAATATTGGTGATAATAAACCATTTGACTATGAAGCTAAATCCTAGATTAAGTTAAGGTGTGTATTATTAGTATTATAAGTAAATAAATAAAAATAAGAATATCCATGAAAATTATATTATGAC ATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCGCCAATTGCTACATCGGCTGCATTAGTAGCTGCCTAGACAGTACCTTCCAGTGCGCTTTGTGCATTGGAAAATGCATGATAAGCGTCGAGTCCTCCCCGACGCAGGCCATCCATATGGACAATCGTTACTTCTGCAAGCTTGGCTGTTCCACTTCTCGCTGCTCCAAGCTCCTCCTTAACAACCATCCAATTATGGGCACCGGTAGCTCCCCAACACTTGGGCATGCCGACTTGTCGAGTAACCCATATTGCTATGCCTTCTGCGTGCTCCCCTGCTTCACTGGCCCCGTCGAATGTGCATTATGCATAGGAAAATGCATATTATCTGCCCAAGACTCCCCCATGGATATCAATCACTTCAACAATGCTTACTTTTGCAAGCTCGGGTGTGCCACTTCTCACTGCACTAGGCTCCTCTCCAACGCTCGAACAGATGGGAAGAAAGTCGAAGGATGTGTTGACTCGTGCTCTCGAACATGCTCCAATGTGAAGAATTAA MKTVLVACLVLSFVVVGISEPTEYVGGANCYIGCISSCLDSTFQCALCIGKCMISVESSPTQAIHMDNRYFCKLGCSTSRCSKLLLNNHPIMGTGSSPTLGHADLSSNPYCYAFCVLPCFTGPVECALCIGKCILSAQDSPMDINHFNNAYFCKLGCATSHCTRLLSNARTDGKKVEGCVDSCSRTCSNVKN Homology
BLAST of CmaCh17G008200 vs. ExPASy Swiss-Prot
Match: A8MRP4 (Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.2e-08 Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A061GC54 (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao OX=3641 GN=TCM_028663 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.3e-17 Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 0
BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A1S3CDB8 (beta-hordothionin-like OS=Cucumis melo OX=3656 GN=LOC103499744 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 8.5e-12 Identity = 50/134 (37.31%), Postives = 70/134 (52.24%), Query Frame = 0
BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A6J1KDK0 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11 Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A1R3H8D4 (Peptidase C13, legumain OS=Corchorus capsularis OX=210143 GN=CCACVL1_21059 PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11 Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 0
BLAST of CmaCh17G008200 vs. ExPASy TrEMBL
Match: A0A2U1N652 (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA300800 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.1e-10 Identity = 45/132 (34.09%), Postives = 58/132 (43.94%), Query Frame = 0
BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG7014099.1 (hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 164.5 bits (415), Expect = 9.2e-37 Identity = 79/90 (87.78%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG6575553.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.9 bits (411), Expect = 2.7e-36 Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 0
BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG6575557.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.9 bits (346), Expect = 9.3e-29 Identity = 67/99 (67.68%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG6575558.1 (hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-28 Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CmaCh17G008200 vs. NCBI nr
Match: KAG6575552.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.0 bits (341), Expect = 3.5e-28 Identity = 66/102 (64.71%), Postives = 72/102 (70.59%), Query Frame = 0
BLAST of CmaCh17G008200 vs. TAIR 10
Match: AT1G12672.2 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1). ) HSP 1 Score: 61.6 bits (148), Expect = 7.9e-10 Identity = 33/70 (47.14%), Postives = 39/70 (55.71%), Query Frame = 0
BLAST of CmaCh17G008200 vs. TAIR 10
Match: AT1G12672.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09 Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0
BLAST of CmaCh17G008200 vs. TAIR 10
Match: AT1G12663.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. ) HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09 Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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