CmaCh17G006540 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTATATATATAAATCTGTCATATCCAATTCCCTCACACTCTCATCATCTTCCCCTTCCCAAATTCAACAGCCCCTTCACGATGAAGCAGAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATGTTCTAATAACCCATCCTTTCTCAAATCATGTGTCCTTTGCAACAAGAATCTGGACCCCCATGAAGATATTTACATGTACAGGTACTCAATTTTTGTTAAATTCATTAGCTGTTCATCATGGTTTATGAAATAGATCGGGAGTTCTTGTGTTTGGTGATGAAATCATGGAATTTGGTCAAGAATTTTCCGTTTTGTTGTTCGGTTTTTTGATGATGTTTGGTCGTGTAAAACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTTTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCACATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTACTGGAAATGGCATAATTGTAATTAAAATGGATGAAAGTAATAGAAGCCCTAAAGAGTGTTTTTGTTTAAGTTCTTGTCCATGGGTTTCTTTGTGTGTGTGTGTGGTAATGATGCAAGGCTG TTTTATATATATAAATCTGTCATATCCAATTCCCTCACACTCTCATCATCTTCCCCTTCCCAAATTCAACAGCCCCTTCACGATGAAGCAGAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATGTTCTAATAACCCATCCTTTCTCAAATCATGTGTCCTTTGCAACAAGAATCTGGACCCCCATGAAGATATTTACATGTACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTTTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCACATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTACTGGAAATGGCATAATTGTAATTAAAATGGATGAAAGTAATAGAAGCCCTAAAGAGTGTTTTTGTTTAAGTTCTTGTCCATGGGTTTCTTTGTGTGTGTGTGTGGTAATGATGCAAGGCTG ATGAAGCAGAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATGTTCTAATAACCCATCCTTTCTCAAATCATGTGTCCTTTGCAACAAGAATCTGGACCCCCATGAAGATATTTACATGTACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTTTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCACATCTCCGGCGACCTGTTGTTTCGTAG MKQRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSCSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDLRRPHHRLPHLRRPVVS Homology
BLAST of CmaCh17G006540 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy Swiss-Prot
Match: P0DO12 (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10 Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10 Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy TrEMBL
Match: A0A6J1JTJ9 (protein MARD1-like OS=Cucurbita maxima OX=3661 GN=LOC111488741 PE=3 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 4.4e-71 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy TrEMBL
Match: A0A6J1GPB9 (uncharacterized protein LOC111456219 OS=Cucurbita moschata OX=3662 GN=LOC111456219 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.0e-67 Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy TrEMBL
Match: A0A5D3C0J4 (DUF581 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001630 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46 Identity = 108/141 (76.60%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy TrEMBL
Match: A0A1S3CGJ4 (uncharacterized protein LOC103500647 OS=Cucumis melo OX=3656 GN=LOC103500647 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46 Identity = 108/141 (76.60%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of CmaCh17G006540 vs. ExPASy TrEMBL
Match: A0A0A0K9B4 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448060 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.4e-45 Identity = 103/131 (78.63%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CmaCh17G006540 vs. NCBI nr
Match: XP_022992436.1 (protein MARD1-like [Cucurbita maxima]) HSP 1 Score: 276.9 bits (707), Expect = 9.0e-71 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of CmaCh17G006540 vs. NCBI nr
Match: XP_023548878.1 (uncharacterized protein LOC111807399 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 267.7 bits (683), Expect = 5.5e-68 Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0
BLAST of CmaCh17G006540 vs. NCBI nr
Match: KAG7013956.1 (Protein MARD1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 266.9 bits (681), Expect = 9.4e-68 Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of CmaCh17G006540 vs. NCBI nr
Match: XP_022953803.1 (uncharacterized protein LOC111456219 [Cucurbita moschata]) HSP 1 Score: 265.8 bits (678), Expect = 2.1e-67 Identity = 131/136 (96.32%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of CmaCh17G006540 vs. NCBI nr
Match: XP_038896964.1 (FCS-Like Zinc finger 17-like isoform X1 [Benincasa hispida]) HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46 Identity = 107/142 (75.35%), Postives = 119/142 (83.80%), Query Frame = 0
BLAST of CmaCh17G006540 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 97.1 bits (240), Expect = 1.2e-20 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh17G006540 vs. TAIR 10
Match: AT1G53903.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 97.1 bits (240), Expect = 1.2e-20 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh17G006540 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 67.8 bits (164), Expect = 7.8e-12 Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of CmaCh17G006540 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11 Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of CmaCh17G006540 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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