CmaCh17G005550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G005550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111488680
Location	Cma_Chr17: 4526955 .. 4527865 (+)
RNA-Seq Expression	CmaCh17G005550
Synteny	CmaCh17G005550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTGGCTGCCTCTCGACAATACCCGTTTAACCTTCTTCAAATGCACCCGATGGCAACTAGAAGAAACATTAGACAAATTCACTTGCCCTTATCATTATTACTGCGACACCGTTTACCCCGGCGATTATCCCCCCACCATTGATTTACTCGTTCTTGTCTTCACGGTGGCAACTTACGTCTCGACCCTTTTGTTCATGCTGGCCGACATATGTCGTCTCGTGGGAAGAATTGTTTCGATCAACCAAAGAGGTTCCTTTTGCCATCTGGGCCAGTTTCTCTTCCGATTTTCCTGTTTGTATTGACCAAAGGCCATCGTATCAATACCCTTTTCCCTCTATTTCTCATGGGTCCTGCAATTCTTCAATTGGTTTACATCTCAGCTCTCACATTTGACAATAATGGAAGCGACAAGGACATTAAGTATGTGTTCTTTGAAGCTTCGACAATGTCTGGGATTCTTCATGCGAGCTTGAATTTGGACGCTCTGATTATGCCTTACTACACGGGGTTGGATGCTTTGATTGGGTCCAATTTTTCTGGGGAATGTCCATCGTGTGTTTGTAGAAACGAGCCTTTGGTGGTTGGGGGGAAGTTTGTGTCTTACAGAGGTTGGTCGGGTACTACGTTTGTGGTTGTGTGTGCTTTGTGTACGAGGATTGTGTGTCGGGTGTCGGGGGAGAAGGTGAAGAGAAGAGCTGTGGTTTTGAGGTGGGTGTTGGAAGGGTTGGGTTGGGCTTTCATAACGTTGGATTGTGTTTATTTGAGTGGAAATTTGGGATTGGAGAGAAGGGAGGTGCAAGGTGTTGCTTATGGTTGTGTGTTTGGTTTGGTGTTTGTTCATGTGGTCAAAGTGGTGAGGAGATGGCAGTTGATGTCTTATGTGGGGAATGATTATGAATTGGACCAT

mRNA sequence

ATGAATTGGCTGCCTCTCGACAATACCCGTTTAACCTTCTTCAAATGCACCCGATGGCAACTAGAAGAAACATTAGACAAATTCACTTGCCCTTATCATTATTACTGCGACACCGTTTACCCCGGCGATTATCCCCCCACCATTGATTTACTCGTTCTTGTCTTCACGGTGGCAACTTACGTCTCGACCCTTTTGTTCATGCTGGCCGACATATGTCGTCTCGTGGGAAGAATTGTTTCGATCAACCAAAGAGTTTCTCTTCCGATTTTCCTGTTTGTATTGACCAAAGGCCATCGTATCAATACCCTTTTCCCTCTATTTCTCATGGGTCCTGCAATTCTTCAATTGGTTTACATCTCAGCTCTCACATTTGACAATAATGGAAGCGACAAGGACATTAAGTATGTGTTCTTTGAAGCTTCGACAATGTCTGGGATTCTTCATGCGAGCTTGAATTTGGACGCTCTGATTATGCCTTACTACACGGGGTTGGATGCTTTGATTGGGTCCAATTTTTCTGGGGAATGTCCATCGTGTGTTTGTAGAAACGAGCCTTTGGTGGTTGGGGGGAAGTTTGTGTCTTACAGAGGTTGGTCGGGTACTACGTTTGTGGTTGTGTGTGCTTTGTGTACGAGGATTGTGTGTCGGGTGTCGGGGGAGAAGGTGAAGAGAAGAGCTGTGGTTTTGAGGTGGGTGTTGGAAGGGTTGGGTTGGGCTTTCATAACGTTGGATTGTGTTTATTTGAGTGGAAATTTGGGATTGGAGAGAAGGGAGGTGCAAGGTGTTGCTTATGGTTGTGTGTTTGGTTTGGTGTTTGTTCATGTGGTCAAAGTGGTGAGGAGATGGCAGTTGATGTCTTATGTGGGGAATGATTATGAATTGGACCAT

Coding sequence (CDS)

ATGAATTGGCTGCCTCTCGACAATACCCGTTTAACCTTCTTCAAATGCACCCGATGGCAACTAGAAGAAACATTAGACAAATTCACTTGCCCTTATCATTATTACTGCGACACCGTTTACCCCGGCGATTATCCCCCCACCATTGATTTACTCGTTCTTGTCTTCACGGTGGCAACTTACGTCTCGACCCTTTTGTTCATGCTGGCCGACATATGTCGTCTCGTGGGAAGAATTGTTTCGATCAACCAAAGAGTTTCTCTTCCGATTTTCCTGTTTGTATTGACCAAAGGCCATCGTATCAATACCCTTTTCCCTCTATTTCTCATGGGTCCTGCAATTCTTCAATTGGTTTACATCTCAGCTCTCACATTTGACAATAATGGAAGCGACAAGGACATTAAGTATGTGTTCTTTGAAGCTTCGACAATGTCTGGGATTCTTCATGCGAGCTTGAATTTGGACGCTCTGATTATGCCTTACTACACGGGGTTGGATGCTTTGATTGGGTCCAATTTTTCTGGGGAATGTCCATCGTGTGTTTGTAGAAACGAGCCTTTGGTGGTTGGGGGGAAGTTTGTGTCTTACAGAGGTTGGTCGGGTACTACGTTTGTGGTTGTGTGTGCTTTGTGTACGAGGATTGTGTGTCGGGTGTCGGGGGAGAAGGTGAAGAGAAGAGCTGTGGTTTTGAGGTGGGTGTTGGAAGGGTTGGGTTGGGCTTTCATAACGTTGGATTGTGTTTATTTGAGTGGAAATTTGGGATTGGAGAGAAGGGAGGTGCAAGGTGTTGCTTATGGTTGTGTGTTTGGTTTGGTGTTTGTTCATGTGGTCAAAGTGGTGAGGAGATGGCAGTTGATGTCTTATGTGGGGAATGATTATGAATTGGACCAT

Protein sequence

MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATYVSTLLFMLADICRLVGRIVSINQRVSLPIFLFVLTKGHRINTLFPLFLMGPAILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNFSGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWVLEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDYELDH

Homology

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BLAST of CmaCh17G005550 vs. ExPASy TrEMBL
Match: A0A6J1JX99 (LOW QUALITY PROTEIN: uncharacterized protein LOC111488680 OS=Cucurbita maxima OX=3661 GN=LOC111488680 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 9.3e-159
Identity = 282/304 (92.76%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY
Sbjct: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60

Query: 61  VSTLLFMLADICRLVG--------RIVSINQRVSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           VSTLLFML       G        R +  +  VSLPIFLFVLTKGHRINTLFPLFLMGPA
Sbjct: 61  VSTLLFMLXRHMSSRGKNCFDQPKRFLLPSGPVSLPIFLFVLTKGHRINTLFPLFLMGPA 120

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF
Sbjct: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV
Sbjct: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 297
           LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY
Sbjct: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 300

[Close]

BLAST of CmaCh17G005550 vs. ExPASy TrEMBL
Match: A0A6J1EP56 (uncharacterized protein LOC111436298 OS=Cucurbita moschata OX=3662 GN=LOC111436298 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153
Identity = 270/304 (88.82%), Postives = 278/304 (91.45%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MNWLPLDNT LTFFKCTRWQLEETLDKFTCPYHYYCDTVYPG+YPPT+DLLVLVFTVATY
Sbjct: 1   MNWLPLDNTHLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGNYPPTVDLLVLVFTVATY 60

Query: 61  VSTLLFMLADICRLVG--------RIVSINQRVSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           VSTLLFMLAD+    G        R +  +  VSLPIFLFVLTKGHRINTLFPLFLMGPA
Sbjct: 61  VSTLLFMLADVSSSRGKNCFDQPKRFLLPSGPVSLPIFLFVLTKGHRINTLFPLFLMGPA 120

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           IL LVYISALTFDNNG DKDIKYVFFEASTMSGILHASLNLDALI+PYYTGLDALIGSNF
Sbjct: 121 ILHLVYISALTFDNNGGDKDIKYVFFEASTMSGILHASLNLDALILPYYTGLDALIGSNF 180

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGECPSCVCR EPLVVGG+ VSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRA VLRWV
Sbjct: 181 SGECPSCVCRKEPLVVGGRLVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAAVLRWV 240

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 297
           LEGLGW FIT DCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLM YVGNDY
Sbjct: 241 LEGLGWVFITWDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMCYVGNDY 300

[Close]

BLAST of CmaCh17G005550 vs. ExPASy TrEMBL
Match: A0A1S3CC89 (uncharacterized protein LOC103498828 OS=Cucumis melo OX=3656 GN=LOC103498828 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.9e-127
Identity = 224/303 (73.93%), Postives = 252/303 (83.17%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MN+  L NTRL FFKCTRWQLEETLDKF+CP+HYYCDT+YPGDYP  IDLLVL+FT  TY
Sbjct: 36  MNYPTLSNTRLIFFKCTRWQLEETLDKFSCPFHYYCDTIYPGDYPAAIDLLVLIFTATTY 95

Query: 61  VSTLLFMLADICRLVGRIVSINQR--------VSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           +STLLFML D+    G+      +         SLP+FLFVL KGHRINTLFPLFLMGP 
Sbjct: 96  ISTLLFMLLDMSSNRGKFCFDQPKKFLLPSGPFSLPVFLFVLAKGHRINTLFPLFLMGPP 155

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           ILQL+YISALTFD NG+DKDIKYVFFEASTMSGILHASLNLD +I+PYYTGLDALIGSNF
Sbjct: 156 ILQLIYISALTFD-NGADKDIKYVFFEASTMSGILHASLNLDFVILPYYTGLDALIGSNF 215

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGEC SCVCRN PLVVGG+FV+YRGWS TTFV+VC LCTRIVCRV+G +V R+ V L+W+
Sbjct: 216 SGECTSCVCRNAPLVVGGRFVTYRGWSSTTFVIVCVLCTRIVCRVAGNEVVRKVVALKWL 275

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 296
           LEGLGW  IT DCVYLS NLG ERRE+QGV YGCVFGLVFVHV+K++RRWQLM  + N  
Sbjct: 276 LEGLGWVLITWDCVYLSANLGAERRELQGVVYGCVFGLVFVHVIKLLRRWQLMYCIRNYN 335

[Close]

BLAST of CmaCh17G005550 vs. ExPASy TrEMBL
Match: A0A0A0K9S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G101440 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.4e-125
Identity = 223/304 (73.36%), Postives = 252/304 (82.89%), Query Frame = 0


Query: 1   MNW-LPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVAT 60
           MN+ + L NTRL FFKCTRWQLEETLDKF+CP+HYYCDT+YPGDYPP IDLLVL+FT  T
Sbjct: 1   MNYPITLSNTRLIFFKCTRWQLEETLDKFSCPFHYYCDTIYPGDYPPAIDLLVLIFTATT 60

Query: 61  YVSTLLFMLADICRLVGRIVSINQR--------VSLPIFLFVLTKGHRINTLFPLFLMGP 120
           Y+STLLFML D+    G+      +         SLP+FLFVL KGHRINTLFPLFLMGP
Sbjct: 61  YLSTLLFMLLDMSSNRGKFCFDQPKKFLLPSGPFSLPVFLFVLAKGHRINTLFPLFLMGP 120

Query: 121 AILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSN 180
            ILQL+YISALTFD NG+DKDIKYVFFEASTMSGILHASLNLD +I+PYYTGLDALIGSN
Sbjct: 121 PILQLIYISALTFD-NGADKDIKYVFFEASTMSGILHASLNLDFVILPYYTGLDALIGSN 180

Query: 181 FSGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRW 240
           FSGEC SCVCRN PLVVGG+FVSYRGWS TTFV+VC LC RIV RV+G +V R+ V L+W
Sbjct: 181 FSGECTSCVCRNAPLVVGGRFVSYRGWSSTTFVIVCVLCMRIVSRVAGNEVVRKVVALKW 240

Query: 241 VLEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGND 296
           +LEGLGW  IT DCVYLS NLG ERRE+QGV YGCVFGLVF+HV+K++RRWQLM  + N 
Sbjct: 241 LLEGLGWVLITWDCVYLSANLGAERRELQGVVYGCVFGLVFIHVIKLLRRWQLMYCIRNY 300

[Close]

BLAST of CmaCh17G005550 vs. ExPASy TrEMBL
Match: A0A5A7TA40 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002560 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.8e-107
Identity = 201/303 (66.34%), Postives = 225/303 (74.26%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MN+  L NTRL FFKCTRWQLEETLDKF+CP+HYYCDT+YPGDYP  IDLLVL+FT  TY
Sbjct: 1   MNYPTLSNTRLIFFKCTRWQLEETLDKFSCPFHYYCDTIYPGDYPAAIDLLVLIFTATTY 60

Query: 61  VSTLLFMLADICRLVGRIVSINQR--------VSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           +STLLFML D+    G+      +         SLP+FLFVL KGHRINTLFPLFLMGP 
Sbjct: 61  ISTLLFMLLDMSSNRGKFCFDQPKKFLLPSGPFSLPVFLFVLAKGHRINTLFPLFLMGPP 120

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           ILQL+YISALTFD NG+DKDIKYVFFEASTMSGILHASLNLD +I+PYYTGLDALIGSNF
Sbjct: 121 ILQLIYISALTFD-NGADKDIKYVFFEASTMSGILHASLNLDFVILPYYTGLDALIGSNF 180

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGEC SCVCRN PLVVG                             G +V R+ V L+W+
Sbjct: 181 SGECTSCVCRNAPLVVG-----------------------------GNEVVRKVVALKWL 240

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 296
           LEGLGW  IT DCVYLS NLG ERRE+QGV YGCVFGLVFVHV+K++RRWQLM  + N  
Sbjct: 241 LEGLGWVLITWDCVYLSANLGAERRELQGVVYGCVFGLVFVHVIKLLRRWQLMYCIRNYN 273

[Close]

BLAST of CmaCh17G005550 vs. NCBI nr
Match: XP_022992339.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111488680 [Cucurbita maxima])

HSP 1 Score: 569.3 bits (1466), Expect = 1.9e-158
Identity = 282/304 (92.76%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY
Sbjct: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60

Query: 61  VSTLLFMLADICRLVG--------RIVSINQRVSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           VSTLLFML       G        R +  +  VSLPIFLFVLTKGHRINTLFPLFLMGPA
Sbjct: 61  VSTLLFMLXRHMSSRGKNCFDQPKRFLLPSGPVSLPIFLFVLTKGHRINTLFPLFLMGPA 120

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF
Sbjct: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV
Sbjct: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 297
           LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY
Sbjct: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 300

[Close]

BLAST of CmaCh17G005550 vs. NCBI nr
Match: XP_022929796.1 (uncharacterized protein LOC111436298 [Cucurbita moschata])

HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153
Identity = 270/304 (88.82%), Postives = 278/304 (91.45%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MNWLPLDNT LTFFKCTRWQLEETLDKFTCPYHYYCDTVYPG+YPPT+DLLVLVFTVATY
Sbjct: 1   MNWLPLDNTHLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGNYPPTVDLLVLVFTVATY 60

Query: 61  VSTLLFMLADICRLVG--------RIVSINQRVSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           VSTLLFMLAD+    G        R +  +  VSLPIFLFVLTKGHRINTLFPLFLMGPA
Sbjct: 61  VSTLLFMLADVSSSRGKNCFDQPKRFLLPSGPVSLPIFLFVLTKGHRINTLFPLFLMGPA 120

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           IL LVYISALTFDNNG DKDIKYVFFEASTMSGILHASLNLDALI+PYYTGLDALIGSNF
Sbjct: 121 ILHLVYISALTFDNNGGDKDIKYVFFEASTMSGILHASLNLDALILPYYTGLDALIGSNF 180

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGECPSCVCR EPLVVGG+ VSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRA VLRWV
Sbjct: 181 SGECPSCVCRKEPLVVGGRLVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAAVLRWV 240

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 297
           LEGLGW FIT DCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLM YVGNDY
Sbjct: 241 LEGLGWVFITWDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMCYVGNDY 300

[Close]

BLAST of CmaCh17G005550 vs. NCBI nr
Match: XP_023549027.1 (uncharacterized protein LOC111807512 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152
Identity = 269/304 (88.49%), Postives = 279/304 (91.78%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MNWL LDNT LTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPP +DLLVLVFTVATY
Sbjct: 1   MNWLALDNTHLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPAVDLLVLVFTVATY 60

Query: 61  VSTLLFMLADICRLVG--------RIVSINQRVSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           VSTLLFMLAD+    G        R +  +  VSLPIFLFVLTKGHRINTLFPLFLMGPA
Sbjct: 61  VSTLLFMLADVSSSRGKNCFDQPKRFLLPSGPVSLPIFLFVLTKGHRINTLFPLFLMGPA 120

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           IL LVYISALTFDNNG DKDIKYVFFEASTMSGILHASLNLDALI+PYYTGLDAL+GSNF
Sbjct: 121 ILHLVYISALTFDNNGGDKDIKYVFFEASTMSGILHASLNLDALILPYYTGLDALMGSNF 180

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGECPSCVCRNEPLVVGG+FVSYRGWSGTTFVVVCALCTRIVCRVSGEKV+RRAVVLRWV
Sbjct: 181 SGECPSCVCRNEPLVVGGRFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVRRRAVVLRWV 240

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 297
           LEGLGW FITLDCVYLSGNLGLERRE+QGVAYGCVFGLVFVHVVKVVRR QLM YVGNDY
Sbjct: 241 LEGLGWVFITLDCVYLSGNLGLERREMQGVAYGCVFGLVFVHVVKVVRRLQLMCYVGNDY 300

[Close]

BLAST of CmaCh17G005550 vs. NCBI nr
Match: KAG6575310.1 (hypothetical protein SDJN03_25949, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152
Identity = 268/304 (88.16%), Postives = 278/304 (91.45%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDT+YPGDYPP +DLLVLVFTVATY
Sbjct: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTIYPGDYPPAVDLLVLVFTVATY 60

Query: 61  VSTLLFMLADICRLVG--------RIVSINQRVSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           VSTLLFMLAD+    G        R +  +  VSLPIFLFVLTKGHRINTLFPLFLMGPA
Sbjct: 61  VSTLLFMLADVSSSRGKNCFDQPKRFLLPSGPVSLPIFLFVLTKGHRINTLFPLFLMGPA 120

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           IL LVYISALTFD+NG DKDIKYVFFEASTMSGILHASLNLDALI+PYYTGLDALIGSNF
Sbjct: 121 ILHLVYISALTFDSNGGDKDIKYVFFEASTMSGILHASLNLDALILPYYTGLDALIGSNF 180

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGECPSCVCR EPLVVGG+ VSYRGWSGTTFVVVCALCTRIVCRVSGEKV+RRAVVLRWV
Sbjct: 181 SGECPSCVCRKEPLVVGGRLVSYRGWSGTTFVVVCALCTRIVCRVSGEKVRRRAVVLRWV 240

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 297
           LEGLGW FIT DCVYLS NLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLM YVGNDY
Sbjct: 241 LEGLGWVFITWDCVYLSRNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMCYVGNDY 300

[Close]

BLAST of CmaCh17G005550 vs. NCBI nr
Match: KAG7013842.1 (hypothetical protein SDJN02_24011, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 547.4 bits (1409), Expect = 7.8e-152
Identity = 267/304 (87.83%), Postives = 278/304 (91.45%), Query Frame = 0


Query: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATY 60
           MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDT+YPGDYPP +DLLVLVFTVATY
Sbjct: 1   MNWLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTIYPGDYPPAVDLLVLVFTVATY 60

Query: 61  VSTLLFMLADICRLVG--------RIVSINQRVSLPIFLFVLTKGHRINTLFPLFLMGPA 120
           VSTLLFMLAD+    G        R +  +  VSLPIFLFVLTKGHRINTLFPLFLMGPA
Sbjct: 61  VSTLLFMLADVSSSRGKNCFDQPKRFLLPSGPVSLPIFLFVLTKGHRINTLFPLFLMGPA 120

Query: 121 ILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIGSNF 180
           IL LVYISALTFD+NG DKDIKYVFFEASTMSGILHASLNLDALI+PYYTGLDALIGSNF
Sbjct: 121 ILHLVYISALTFDSNGGDKDIKYVFFEASTMSGILHASLNLDALILPYYTGLDALIGSNF 180

Query: 181 SGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEKVKRRAVVLRWV 240
           SGECPSCVCR +PLVVGG+ VSYRGWSGTTFVVVCALCTRIVCRVSGEKV+RRAVVLRWV
Sbjct: 181 SGECPSCVCRKKPLVVGGRLVSYRGWSGTTFVVVCALCTRIVCRVSGEKVRRRAVVLRWV 240

Query: 241 LEGLGWAFITLDCVYLSGNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMSYVGNDY 297
           LEGLGW FIT DCVYLS NLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLM YVGNDY
Sbjct: 241 LEGLGWVFITWDCVYLSRNLGLERREVQGVAYGCVFGLVFVHVVKVVRRWQLMCYVGNDY 300

[Close]

BLAST of CmaCh17G005550 vs. TAIR 10
Match: AT2G41610.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 266.2 bits (679), Expect = 3.2e-71
Identity = 137/292 (46.92%), Postives = 192/292 (65.75%), Query Frame = 0


Query: 3   WLPLDNTRLTFFKCTRWQLEETLDKFTCPYHYYCDTVYPGDYPPTIDLLVLVFTVATYVS 62
           W    + + TFFKCT+WQ E+TLD   CP+HY+CD++Y GDYP   D+LV  F   TY++
Sbjct: 5   WEMDSDRKKTFFKCTKWQFEDTLDPINCPFHYFCDSIYAGDYPQITDVLVFFFVTVTYLT 64

Query: 63  TLLFMLADICR-------------LVGRIVSINQRVSLPIFLFVLTKGHRINTLFPLFLM 122
           TL+ ++  +                  R +  +  +SLP+ + +L KG RINTLFP+ + 
Sbjct: 65  TLIVVVRKVISRRRRENDDDGDDDKARRYLLPSGPISLPLIILILAKGQRINTLFPISIF 124

Query: 123 GPAILQLVYISALTFDNNGSDKDIKYVFFEASTMSGILHASLNLDALIMPYYTGLDALIG 182
           GPAILQLV +S L F+NN  +K+  +VFFEAST+SGILHASL LDA+I+PYYTG DAL+ 
Sbjct: 125 GPAILQLVQLSVLLFENN-IEKEASFVFFEASTISGILHASLYLDAVILPYYTGFDALVT 184

Query: 183 SNFSGECPSCVCRNEPLVVGGKFVSYRGWSGTTFVVVCALCTRIVCRVSGEK-VKRRAVV 242
           S FSG C SC+CR EPL+VGGK VSYRGWS TTF+VV  L  RI+C++  E+ + +R +V
Sbjct: 185 STFSGVCKSCICRKEPLIVGGKIVSYRGWSSTTFLVVGVLFLRIICKLCKEEGINKRVLV 244

Query: 243 LRWVLEGLGWAFITLDCVYLSGNLGLERREVQGV-AYGCVFGLVFVHVVKVV 280
           ++ V++GL    +  DCVYL+    +E   +  V  +G +  L+ V+V+  V
Sbjct: 245 VKNVVQGLTLLVLIRDCVYLAVMSPVEEPILFRVFVFGFLLLLICVYVITKV 295

The following BLAST results are available for this feature:

BLAST of CmaCh17G005550 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G005550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JX99	9.3e-159	92.76	LOW QUALITY PROTEIN: uncharacterized protein LOC111488680 OS=Cucurbita maxima OX...	[more]
A0A6J1EP56	1.5e-153	88.82	uncharacterized protein LOC111436298 OS=Cucurbita moschata OX=3662 GN=LOC1114362...	[more]
A0A1S3CC89	1.9e-127	73.93	uncharacterized protein LOC103498828 OS=Cucumis melo OX=3656 GN=LOC103498828 PE=...	[more]
A0A0A0K9S3	1.4e-125	73.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G101440 PE=4 SV=1	[more]
A0A5A7TA40	4.8e-107	66.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmaCh17G005550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992339.1	1.9e-158	92.76	LOW QUALITY PROTEIN: uncharacterized protein LOC111488680 [Cucurbita maxima]	[more]
XP_022929796.1	3.2e-153	88.82	uncharacterized protein LOC111436298 [Cucurbita moschata]	[more]
XP_023549027.1	2.7e-152	88.49	uncharacterized protein LOC111807512 [Cucurbita pepo subsp. pepo]	[more]
KAG6575310.1	2.7e-152	88.16	hypothetical protein SDJN03_25949, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7013842.1	7.8e-152	87.83	hypothetical protein SDJN02_24011, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh17G005550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41610.1	3.2e-71	46.92	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37726	TRANSMEMBRANE PROTEIN	coord: 6..285
None	No IPR available	PANTHER	PTHR37726:SF1	TRANSMEMBRANE PROTEIN	coord: 6..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005550.1	CmaCh17G005550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071669	plant-type cell wall organization or biogenesis
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane