CmaCh17G005520 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G005520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein LHY isoform X2
Location	Cma_Chr17: 4449133 .. 4464090 (+)
RNA-Seq Expression	CmaCh17G005520
Synteny	CmaCh17G005520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCTATCATTGGCAATGTATCCAGATTATCGCATATACTTGTTTAACTTGATGGGTATTTTCACTACCGTAAACACAAAAGTGATAAGGCAACCCTAATCTTCAACCAACTATCAAACTTTTGTTGAAGCAAGAGCCCTTGAATCAAAGTAATAACACCTCCTTATACAAAATTAGGAACAACCAAGAGATAAGGCAAGATTTGGAAACTTTGTTATAAATTGTGTAACTTCACAATCGAACTTGATGTAAGTCTTGATTGAATGGCTCAGGTGCAATTCGCAATTCTACACAAGAATTACTTAACTTAGAAATGACAAATATGATGCTCTAATTTCTAAGGAAAACGTCTCAATTTGAGATCTAAATTACATTCATCCACGAATATGATTTTTACATATTATACTGTGGGTATTTATAGTCTCTCAACAAAAGATATTTGTGGTCGTCTCAATTTGAGATTTAAATTACATTCATCCATTGTGGCCGTCTCAATTTGAGATCTAAATTACATTCATCCACGAATATTATTTTTACATAATATATGGTGGGTATTTATAGTCTCTCGACACAAGATTTTATAGTCTCTCAACAAAAGATATTTGTGGTCGTCTCAATTTGAGATTTAAATTACATTCATCCATTGTGGCCGTCTCAATTTGAGATCTAAATTACATTCATCCACGAATATTATTTTTACATAATATATGGTGGGTATTTATAGTCTCTCGACACAAGATTTTATAGTCTCTCAACAAAAGATATTTGTGGTCGTCTCAATTTGAGATTTAAATTACATTCATCCATTGTGGCCGTCTCAATTTGAGATCTAAATTACATTCATCCACGAATATTATTTTTACATAATATATGGTGGGTATTTATAGTCTCTCGACACAAGATTTTATAGTCTCTCAACAAAAGATATTTGTGGTCGTCTCAATTTGAGATTTAAATTACATTCATCCATTGTGGCCGTCTCAATTTGAGATCTAAATTACATTCATCCACGAATATTATTTTTACATAATATATGGTGGGTATTTATAGTATCTCGACACAAGATGTTTGTGGCCGAGATTTAAGTCTCTCGACAGAAAATGTTTGTGGCCGAGATTTATTTCCGATCCCCTTATCTCCACAAAAGACTAAGTCAAATTGAACATGTGACCCTTACATATTTTATGAAATTAAAAATAATATTTTTCAACAAATGTAGATATGCTTGATGGCTAATGCCACAGGTTTGAAATCAAGAACTCTCTCGCATTCTGTTGTTGATATTTTTGAATATTTTGAATCTTTTGGTAATATATTAGTTATGTATATTCCTAATCCGTTAATATTCTTTCCCATTTGAAATGGAATATATCTTAGATATTCCTAATCATCCGTTAATATTTTTTCCAATTTAAAAGGATATTATAATATATCAGTTATAAAATATATCTAAGATATTCGTAATCATTTAATATTCTTTCCAACTTGAGGATGAGGAGATAATATAATATATTAATTATGAAATATATCTTAGATATTTATATTTATAATACCTTAATATTGTTTCGATTGGATTAGTAATATATTTTATTTTATTTTATTTTTAATATTTAATTAGTTTATATTTTACTTAGTGGATAATATTTCTCATTCTTACCGCTTACCATTTATATTTTTTAAAAATAAAATATTAGGGGATTTTTCTCATAAACTAATATTTTTTATTATTTGTTATTTTTTAAAAACTACAATATTATTTAAAAAAAAAAACTGGTTTCTCTCTACGGTAAGAAAAAAGAAATACACGGTGGGGAAGCTCTCTCCCCTCATATACCACGGAAACTTGTCGTACGCCTCAGCCTTTCTAGAAAAACGCCACGTAGCGGTTTCGTGAATCCACGTCAGAAAAACAAAAAAAAAAGAGTCATACCACCAACTCCGAACCCACACGTGACCGGCCACTTCCGGTTACAATAGTCGCCACGTGTACGCGGGCCCCACCAAAGACAGCTGGACGGGACGCTTTTAAGCACTCAGCCTCTCCGCTTAGAACTTGTGGACGAGATTGGCGGACCAAATAACAAATTTCAAAATAAAAAAATAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAGAAAGGAAAAAGCGTATCGGTGGGCTTTTATCATCCACAGCCACTAGTTTTCCGCCACTTGTCAAAATCCAATGCAACGACCTTTCTCTATTGCCTTCTTCCACTTGTTTGTAGCCTCAAAAAATAAAAACTAAAAACTCGCTGGTTTTTATTTTTTAAACGGCGCAAAATCCAGAAGAAATTGTAGTGGCTGAGATTGCTCCGACGCCCAAAACTGTAACTTCCGGTGCGTTAGGTCTCATACAGAAGAAAAAGGAAACAGAGAACAAAAACAATACTCTCTGCTACTACTTCCACCCTCTCTGTTTATTGATTCCTCTTCTTCAGATTCTTCTTGCTTTTTCCTTCAATTCACCTTCCTAATCTCTACAAACCATGGGGTTTCTGCTGAGTTTCTAGTGATTTCACTCTCATGCATGATCGGACTACCCACTCTTCCCTTCCGAATTACCTCCAACCATGGCTTTCTTCCAAGGTACTCTTCTTTTTCTCTCTCCCTCTCTCTCTAGGGCTTCTTCTTAATCCTTACTCTCAGTTTGGTTGCCGAGAAAATTTTATAAACGGATGGAGTTCTTAATCTGTAGGCTTTTGTTTTTGCAGATTGAATTGCTTGGTGCTGCTTAAGTTAGTTGATTTTTCTTTTCTCTGTTTTTTTTTTTTTTAATCATTCGATTTCTAATGTTTTCTCGGCAGCTAAATGGATAGTTTACTTGGCTTTACCAGATCGGTATTGTAACGATGCATATCTGTGAGCTGGAGAAAGTAGTTTGTTGATTACTGATTAGAATTTTCTCTCTTTTCTACATTCTAAGGTTTTGGCGTCTTCCAGTTCGTTTTGGTGAGGATTCTGAATAAGGAATTTTCATTTTAAGTTCTTTTTCGGCGAAGTATCTCTATCTTTTTACGTTGGCTTCTGAAAATATTTTCTATGAAGTTCTATTTTGATGTTTCCTACAATATTAAAATTTTACATAATATAAGTCTACTGATGCAGTTACTCTTAATTTTGTTTACTTGAAAAAGAGACGGATCGCTTCCGATTGCAGTCGCTTTTTTTCTATTTTGCAGTAGCATCAAGGAGCCCGGTGACAAAAGAAACAACGGCTTCACCATTTATAATTTTTTGTATCCCTAACAATGATGAAAGGAGGTTTTCTTTTTACCCCTTGCTCGTTAGAGAGGATTTGAAGCAGCGGTTGCTGCTCAGGTCCTTCGATGGAACCCAACTCCTCAGGAGAAGACTTGGTTTTTAAGGTAATAATCCATTCCCCCTTCTCACAGAAAAGGAAAAGATAATTAAGGAGAAGAAGTTAAGAAAAGGGAAAGAAATGAAAAATGAAAACTGTTTATAATTGAGGTCTACATATGATAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGCTGGACGGAGGAGGAGCACAATCGATTTTTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATTGAAGGTTATATTTTGCTCAACTGTCAGCATTCCTTTTTGACTTTTGTTGATTTCTTAGTTTGTAACCTTGGTTGGATGAATTATATACTTTCTGATATTTGATGCAAAATTTAATTACCATACAGGTCATTAATCAAAATTTGCTTCAATTAAAAATTTTATGATCTGTGATACTAATTTATGGTTATTGTTGAGCTAATTTGATCTGGATCCTTTAATGAATGCTATCAAGTTTATATTGTCCCTCAAAAAGGCTCCTGATTCTCCGTTGTATGCCTTTATATGCAGAGCATATTGGAACCAAAACTGCAGTCCAGATACGAAGTCATGCACAGAAGTTCTTTTCAAAGGTCAATTTGTACCCTTCTCTACTTATTCTTATTTTTTGGTTTTTCTTCTTCTTGGCTTGTTTTCCTTGATTTCAATGCTTTCATTTTAATGAAATATTATTGTATTATGGCGAACTTGTTTCCTTTTGTGATTTTTTTTTTGGTCCAGTTGTTTGGCTCATAATCTTGCTTGCTCATCAGTAGAACATCTGCGTTTCTTTTCATAATCTTGCTTGCACATCAGTAGAATGTCTGAGCATTTCTTACAGGTATTTCCATTTTTTTAGGATAGCAGGTATTTACATTGGCATTATGGCCTAGTTGCTTATCCTGTATGCTTGTTATTATATATATTGATTATAGATGTTGCCATATCTGTAGTATGGGTACTGGACTAAAATTAGTTTGACAAGATTGATGCAAAATCCCATCTATGGAAAATCTCATGGCTTTCTTTTGGAATATGTGGAAACAAAGAAATCAAAAAGTATTCACGGAAAAGATACGTACTTATACAAATCTCTTTGAAAATATTATTTACCAAGCTATATCTTGGTGTAAACTGTTTAATATTTTTGCTTCCTATAGTTATGTCATCCTCATTGTAAATTGGAAAAGTCTTTTGTAAACATTATGGATATTACATCCTTTTTGTAAATTTCAAATATCAATGAAATTGTCTCTAATAATAATAATAATAATAATAATAAAACAGTGATGACACTGATCAAATGATTTATGTCTCTTTGAGGCTTTGACATATGACCGTTGAGATAAAAAACAAAAAAAAAGGATGAACAAGAAGACCTTTTCTCCAAAACATGCAAACCTAAAGTTGTCGCATGACTTCTCTTTCTCAAGATGATGGCTTCGTTTGACTAAATCCTCTGGCTTGGGATGCTAGAGTTCTGATGTTTTTTTCGATTGTTGGGTATTATCGAACACTTGCTGAAAGTTTCAAGTTAACGGTAAATAATGCACAATTCAAATAGTTTAAAGAATGTAAGGACAACTTTTATTTGCACAAAGGATGTGCTGACGACAGCATGAGATTAATAATTTCACAAACCGACAATACCTAGGTTCTCAATTTACAATGAGGCCGTGAGGAAAGGATATTGATGTTATCTACAAAATAACAAGAACATCACTTACATGTAGACTAGTCGAAGAGCTTTTGTCTAGTTTAAAATATTTATGACTGGAGTTTACTTTTGAACAAAATGAGTTTAATTTGTTATCTAGCAAAAAAAATGTTGGGGGTAAGTAATGTTGTACATCAACGTGTAAATTGCAACTCAAAAAATCGAAGAGTTGTTTAAAGATCCAAAAGTATCAACTCTAGATTGCGTTAGGTTTTAGTATCTCATCTTGAAGATATGTGCTTATCTTGGAGGGAGCATCTTGATTTGGCCAAGATTAAAGCTTCTCTTGGATGTTCTCTTCTTTGTCTGCTAATTATTCTTTTAGCAATATTTCTCTTGATTGGATGCATTTGTGCCTTATTTTTATTTAGCTTTCTCCAATTTGGATTTCTACCCATGAACTTTTTTTTTTCTTTGCATTAAAAATATAGTTTCTTGAAAAAAAATATCCAATGATACTTGGGTACTTCTTATCAGGATTTTATGAGTGAGTTAAACATATTAAAGTTGATTATCATTTTGTTTGTTCGAAAATACAACAAGGCTTAGTTTCCATAAGATGTGAAAATTGGAGAGTTATTATGAGTCATCTTCACCAAGGGCAGTAAATGGGAGCTCAAATAGAGTCCACAAAGTGATTTAAGGGTGTAAATGGGCATAACTAACACATATGTAGCTCAAATAGAGTTCACAACCCTAATTCACTTAGGGCAGTAAATGGGCATAACCATGTACATTAGTACATAGAACTGTAAATAGCTAAGTTACACATTGGTCCACAAGTTGGTTGTTCTTTATTGTAATTATACCTTCTTTGGTTTAAGAACTCAAGTTTTATGCACACCAATGTATATATGACTCAAGTGAACGGAATATGATTGAGTGTTTTTGTTTTCAAATCTTTGTTAGCGTATAAACGTGCCAAATTTGTTATCTATTTGATATAGTTTTGTCTCCTTTTGAACCTGTAGTACACATGGTAAATTCAATAGCCATTTTCAGCGCCACCACATTAGTGTGATGAAATTGAATATATCTTCCTAACTCATTTATGGCCTTGATCTTGTTGTAACGTTGGGGCTTCCCAGCTGTGTCTTGTTGATTCAAATTTATTTCCGTGATCGTAAAGATTTGTTTTATAGTTTTATTCTTTTGAAAAACAAAACAAGAAAAAATTTCTTTAAAAAGTTTGGGGCTTGTTATATGCAACTATATTGTTATTAGCAGTTTAAGTAAAGGTTTTTTGTGCATGAAACTTGAGTTCAGCCAATCAACTTTTTAGTCAAATGATTTCCTTTTTATTTTTTAATTATAATCTTTGCATATTCCTATCCAATATATTTACGCATAATCTTTACATGTTCCAGGACTCAGTGTCCTTGCTCCGACTTATTTTTGTGAAACTTTCCTGATGTACTTGGTAAAGTCTGCTTCCTCATCGCTTTATTCTTATTGTCTTAATTGGCAAGTGCTTCAAATTCTTACACAATTGGATAAGGGCATCCTCACGACTGTTGAATTGGTAAAGGTATCTACAGATAGTGTGGCCAACCATCGATCTTTATCAGCTTCCTCTCGCTACAGGCTGAGTGGTAAAGATTAGGATGCTTGCTAGGTCTGCTAAACTAGAATAGTACATGGCCCCTTAGGCCGATTGGACTAGATTGAAAGCCCGGAACATCCTTGATATCTTGAAGTGACCCTCGCGCTTGGAATACTTGACTGAGACCTTAGCTGCCAATACTGACAGAAAAAATTGCCCATTCCCCCGCTTTTTCAGACTGGTGAAGAGAATTTCTTAGACTGGGGGTTTTGAGATAGAGGTCCTTTAAGGTGAACTTATTCCTTACTAGTTAGAAACAATTTTTCATACCGTCTTTCCAACTGGCTATTCTCGGGCTTGAAAGCTTGAAAATGACAAATAGGGCGCGGACGAAGTGGCTTAGTGAAAAGGAGGGATGGTACGCTGAAATGGTGAGAGGCATCTTTATTTGAGGAGGAGGCTTTGTTGTTCGGCTCCCCATAAATAATGTTAGGATGCACTTATGCTCCTATCGACCCAATATTAGATAGAGAACCATCTTGGGGCTATTTTCTATAATAGAAACCTTCATTCAGTGGGAAGGAGAACAATGCTGGTTAACCTATCCCACATAAAATGGCCAGAGAGTTAACACAGTTGAATGATTCACCTAGGCTGACCTTGCCCTAAGTGTACTGGAGAGTTAACACTGTTTTCCCCCTCCCAACAATGCATTTTTTGGTAAATCCAATTGCATAGAAAGTGGTCAAGAGTCAGTTGAGTCTGTGATGGCTTGCTTTCAACAGTTCATGTGCTATTGATGGGTCTCCAATCCTTAACTTACTGAAACTCACTGTATATGCTTGCCCCTTATTATTTTAAGTTACCTTTTATCTTTTTTACTTTTATTTTCCTTCCTCCTTTAGATGGGAGTATCTAGGCTAGCTTATGCACCTTATCTAACTCACGGGGACGTGCCTAATCCTACAAGATTCGGATGACACATTCATGTTGATACTCATGAATGCCCTTCTCCTATATTGCCTTGATTTAACCAGTCTACCCGACTATGGGTTTGCTAATGATTCATCCTCTTTTGTTGAATTTAGGCAGTTTTCTTGGTCTAGGGGTGGCAGGCCAACTAGTATGTTCAATTTATGCTAAGGGTGTTGGAGAGTTGATCACCATGTCCCCTATTGCATTTTAAGGTAAATCAACTCTACCATCCACTCACATAGAAAATGACAAGGATTCACTCCCTCCCTAGTGACTCCTTCTAGATTGCCCTAGAGAAAGTATTATCCAAAATAGCATTTAAGGTGAAGTACTGATTAAAAAAATACCTGCAAGTGAAGCACCTAGTTCCTCCAGGGGCCATTTCATTATGTTTGGCATGCTGTGTTTGCCAAATATTATGAAGAATACTGGAGAAAGTAGCCGTTTCTTAGTTCTTAACTCAGAACGATGTCTTCTAAACTTAGGATGGTTCTCTCTGGAACTCAGGCCAACAATTACTAGGATCCTTTAGAGCGTGCCATCAAATACAGTCGAGTCAAAATAAAGTTAAATGACTAATTACCTATTCAGATAATTTTTTTCCTAACACGATCCTTTCTTCGTTGTCTAATCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGTCCACCTTTCAGTTTTCTGGTTACATTTGGAAATGTGCTTCCACAGGCTTTTTTTACAGTTAGTGCCTGCTTAATATTGTTCTCCTCCCTTGCTCAATATTGTGTATGAGACAATATCTATATACGTGCCACAGTGCTTTGATCACATTCATGAATTTTCAACCCAGTTTAGATATTGGTAATTAGGCTTCAATTGGGATAAGCTAGCTGTTAGGTTAGTTGTGATTTGGCTGGCATAAACTAGCCGATGACTTAGTTAGGATTTGATTGGCATAAACTAGCTGATGTGGGGTTAGTAGGGATATAGTTGGCGTAAACTAGTATAAGAATTAGTGTTCTATCTGCTGACATGTCAGATTTCATTTATAAAGTTTCTCTCATTTGGTTCACACCAAAATTGGTATCAAAGAAACCTTGTGAAAGGTTTGATGGTTAGAAAAAGAGCATAACACTTTGGAAGTTAAGTAGTCTTGACAGTAGGGAGTCTAAAATAGAATTTCTCCATAATTTGAAAACTATTTTCTCGCCAAGAACACCCACTCGTCATCTCTTTGGAGAAATTCATAAAAATGTGACCAAAGTTCAACTTATGATTGGTACAATGGCCATACAGTGGAATGAACTTCTGAAACCCTTTAATTTGTACAGTCCCCGAGAGAAAACAGAAGGTAACAACATTAACCATTGAAACCAAAAACAGAGAGGCCACTCGCAGAAAATTCTAATAAGAGTTTTTTTTCCACATGATAAGCCCTAAGAGTTCTTCATTTTTTTTTTTTTTTTTTTTCCTTTTGTTCATTTGCGTTACTGACTGAAGTGAAAGCAGTTTTAGAGAAGGGTTACTATTTGTGTAGTCTGAAAGACATTGCTGAAAAAAACCTCAAGTTAGTAGCTGTTGATAGCGTTGGAATCCTAGTTTATTTCACAACCAGGATATAAGTTTCTTAAAAAGATTAGCTTGCACCTAGGAAGAACATAATTGATCTAATTGAGCTACTAGTCTTAATTGGCAACCTGATTTTTGAGGGGGTCGTATCTTCAGTCCACCTTATTCCTTCCCAGAGGTAGATTTCCTTGTTAACTGAACATGGCTCACCTTTCAACCACAGCTAAGGATTGCACTCTGAAGAAACATCAACCACCGCATCTAGATGAGGAAGGCATACTCTTGTTGATGTCCGACCATACACTGCCCCATGTATAGAAAACAAAAATTCAAAGGCTCATTAAGTGAAATGTTGACGGTTGAGATTGTCTTCAAGCTTTGTTATCCTAGTGAAAAATTGGTGGGAGTTGGGGATTTGTGTGAACTATCAAGTGCTCAACAACATCAACTACCCCTGATAGGTTCCAATACCAATGGTTGAGGAGTTTTTGGATAAGCTTTATGGGTCCAAAATCTACTCTAAGATAGATCTTAAGTTGGGTTATCATTGGATTTGAGTGATTAAAGAAGGTAGACCTAAGATAGTCTTCCAAATGACGAAAGAAGCTATGAATTTCTAGTGATGTTTTTTGTTAAATCACTATTGAACCCAAAAGCCTAAGTTGATGGATTAGCACTCCCTCCTCACTTGTGAGCTTGAAAATTTGTATAAGGCCCAATGGAAATAAATAGTTAAGTCAAAAATAATTGGGGAGGAAATGACATTATAGGTGTTCGCTGATACATTGTTATCACCACTGAACCCAAATGCTTAGGCCGATGGGTTACGTAAATTTAATTATATCAACCTTAACAGATCTCGTGAATGCACTCACAACTATCCTTTTTAGTCTCTTCTTACACAAGTACTTTCTAGTAATCTTTTCTGATATTCTAATTTACAACCTAGATTTATGTCCATATATCACCGACTATAGTTTTTAATCTACAAGGAGAATAATCCTTATGAGAACTTGAAGAATGTGTTGATTGGCAAGAGATCCCATAGAGGGTCTTGGTGAGTAGGTGTTAGCACAATAAATGGAGGTAGACCTAGAAAAGGTACGGTCGATGCTGCAATTATCAATGACCACTAATGTGAAAGAGAGCTTTTGGGATTCTGAAATCTCATGGGATACTATTGACAGTTTGTTTCAAATTATAATATACTATTGTCGCTCCTTGCACCCAATTCCTCTAGAAAGACTCCCAATGGGGTGGTAACTTGCCTATGTTGGCTCTTCTGCTCTTCAGCTTGCCTTTCATGATTGAAATTGATGCAATCCAATACCGGATTAGAGAGAGTTTTATCATGGGTGTAGCGCATAATCACAATTTCATTCAAAATTTGTTACATTAAGCTCAATTGATGTGTGTTTACAAAAAGGACCTGGTGGCGATAGTCCTTTTAATTCAACAATGGAGAACATACTTACCAGGCCGAAAGTTTATTCCAAGGACTGATCAACAGGCATTGAAGTACCTCCTAGAGTTTAGAGTACTACAACTAGACTAATAATGCTAGGTTTCTGAACTGTTGGGAAATGGCTTCAAGACTCTATATGATTTGAGTTTGAAAACAATGCCACTTATGCTCGACCACGCCTTTCCCAGTCATTCACTTGGCAAGTTCCTCACCATTCTTGATATCAAAGTGTCTAATGGTGAGGTCTTAAATGACCCAAAACTTATTCAGATAATTATCAACCTCAAGAAGATTTGGCCAACATATCTAAATACACACTAAAAAGGGGACCTTAATCCATAAAGATTGCCTAGTCTTGTTGAAGACCATACCTTAGTTCTTGCAATACTGCACATGTACCATGATTCTATCATACTTACACGAGGCTCACGAGAGTGTTATACTAGATTGATATGCAGACAAATATTAACATGTATGTGAAACATTGTACAATTTGGAAGCCTAACAACACCTTGTGTTGAGGTATTAATATAATTAAATTTACAGTAATCTATTCGTTTAAAGTTTTGTATTCCAGCTCCTTTAAGTTGTTTCCTTCCCATTTAATATTGATTTCCATTTGCTGAGGTTTTTACAAATTTCCAATATGCACCCCTAACAAGTGGAAATTGGAAATTTCCAATACTGACTGACAAATTAACATAGTCCTTCCCCTAACACGAGACTGACGAATTCAAGCCAGAGATGGGGAGTGATGACGGTATGAGAGATGAGGGATGGAGTGAGAAGAGATCTGATGTGATGTCAATAAGGGAATGAGATGTAATGGCCTGGAGCATTACGAAACTTGAATTTTCAGCTTTGGCACCGCAAATATTATGATGAAGAATACTTGAAGAATGGAAGTTCTATCTAAGTCAACTGTACATATTTACTTCAAACAAGGTTGCTATTTGTATAGTTCATAGTTCACTTCTATATGATAGAACAAAACATGTTGCAATTGACAAGCATTTCATAAAATATAGGGCCAAGCACAATAGACTGACAACCATTTGATAAAGGAGAAGATTAATGCCTGTGTTATGTGTATCATTTATTTTCTGGCAACGAAGCCAACAAGGATGTGCTTTCAAAGGGGCAGTTTGACAAATTGATATATAAGTTCGCTCAAGCTTGAGTGGGTGTTGGATTTCTTTTCCTGTAAATACTAGTGGTTCACAGTTTTGACCATAATTATGTTATCTTCCATCTTTTTCTTATTTGTAGATGGCATTTCTCGATATTTGACAACATGTTTTATTTGGATAGCTAAAATGAGGTGAACTGTTCTGAAAGTGTATTGAGGTTTTGATAGCCTCATTTTTTGTTTTGTAAATACTTTCTAATAATATAATTTATCTGCCAACTTCAAGGAAAAAGTTTGCACTCTTTACAGTAGAAGACAATTTCGACGGTTAAATTTACAAGGTCCCTTATCCTTGAAAGGACTGTGCATGTAAACTACCATTTTCATGTTCCTTCTGGAGACTAAACTTCTATATGAACATATCAAATCGGGCCACTATCTGTTTCTTAGATTCTTGCGTCCTAGATCATGTACAAAGTTCCTAGTTCAATATAATTTTTCAGCAATTGTTCAACTCCCCACTGCAAGGATGGATATCTTTAAAAATGTTCTCTGCGTGGATATTGTGCGAAGATATGTTTTATTTTCTGAGATTCTGATTTTTTCTTTAATTGAATTTTCCCAGTTGGAAAAGGAAGCACTCATTAAGGGAATTCCTGTAGGACAAACTCTTGATATAGATATTCCACCACCTCGGCCGAAGAGGAAACCTAGTAATCCTTACCCAAGGAAAACTCCTATATCAAAGTTGGGTGCAAATGACGGGAAGCTCTTGACTTTGGTGTCTTCTTCACAGAGCAAACAAATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGTGTGGTGCACTCTTCTATCTTCTTCCAATGCGTTAATATTTATTGATATTTCACTTTTGCTACTCATACTATTAGGCCACTAGTGGAGAAGAACAAGCAACTAGCGAAATGGATACTCATGACGATAATTGCTCAGAAGTATTTACCCTTTCACGAGAAGCTAACTTCTTTTCTTGGAAAAACAAAAATTCTGTACCTGCGCAAGTTAAACTGAACCTGAACGACTTGTGTGCTTTCAGGGAGTTTGTGCCTTCATTTAAAGAGGTAATTGTGCAATGTGAAACAAATGAATCTTATATGTTCTTTTAACTTATATTGAATCGTAATGTCATACTACCTTAGCTTGATGCAAAACAGCCACTCCATGATAAAGGCAGGGGCAAGGTTTCAGAATTTGAGATTGCAAGTGCTTCACAAGAAAAAATTGTGTCTGCTGAAAAGAAAGAATCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGTTGCTCATAACTATCCAAGGCATGTGCCTGTGCATGTGGTCGATGGAAGCTTGGGAACAAATGTTCAAGAGTCTGTAACAGACACTCCGCTGCAGGAATCCTCTTTTAATCCAGCAATGGAGATTCCAGGAGAGCATAACATACATCGGAATCCATCTGATTCTGTTTCCTTGGAACGTCAAAATAATGCACCTAGGTGCATTTATCAATCATATCCAACTGTTCACCCCACTCCATTTACCTTACTTCCCCCTAACCAAGAAAATTATAAGTCACTTCTCCACATGTCCTCCTCATTTTCAAATCTCGTTGTGTCTACCCTTCAACAAAACCCTGCAGCCCATGCAATAGCAAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAGCTTCTGTAGATTCTCCCATGTGTGATAAGGAAAGTTTTAGAACCAAGCAAATGAACTCCACCCCAAGTATGGAAGCCATTGCTACAGCAACTGTAGCAGCTGCAACTGCATGGTGGGCGGCCCATGGACTGCTACCTTTATGTGCCCCTTTTCATTCTGCCTTTACCAGTTCTGCTATATCTGCTCCTGTGGCACAACCATCAGATACCTGTCCAAATCCCGAGTCCAAGGACAAAGCAGAAAGTTCCATGCAAATTGATGCAGAACAATCAGAAGCTTTAACTGCTCAACATTCAGGTTCCAAGTCACCTACTCATTCATCATCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGCAAATGCTACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGTTGAGTTTCATGATTCAAACAAGGGAAAGAGGGGAAAACAAGTAGATCGTTCCTCATGTGGTTCCAATACACCATCTGGAAGTGATCAAGAGATAGATGCAACAGAAAATAATGATAAAGAAGAAAAGGAGGAAAAAGAGCTTGAGATGAATTGTCCAGCTTCCGAGTCCAGTAATCGTCGCAGTAGATGCATCAGTAACATAAATGAATCTTGGAAGGAGGTTTCTGATGAGGTAAAAAGGGTATGTTAGTTTATTCAATGTATTTTGTTGCAGTTTTCTTCGTATAATGCTTACATTTTCTCGTAAGTTATATCATACAGGGGCGGTTGGCTTTTCAAGCTCTCTTCACTCGTGACATATTGCCTCAAAGCTTTTCACCTTCATATAATGTAGAAAACGAGAATGAGAAGAATGAGAATGTTGAGAAAGATAGTAACATTATAGATAAAGATAGTTGTGCATCCGTTATGGACCTTAGCAGCAAGATTTGTGGACCTTCTAGAGATCAAGTTATGGAGAGATACACATCAGCAACAGGTGACAACAATGGAGAGGGAAAAATTCTCACAATTGGACAAGGAAATGGAACACCCAAGGGTTGTCGAACAGGATTCAAACCTTATAAAAGATGTTCAGTGGAGGCAAAGGAAAAGAGAATGACAACATCCAGCAACCACAGTGAGGAGGGAGATCAAAAAAGACTACGCCTGGAGCAGAAAGCCACAAATTGACAGTTGATTGGCATGCAAACGATCAAAGGAAACCTTTATCTGCTGCATGTATATCTAACCTTCCTCGTCAATCTATCTTCCCCACTTTAATTCTTCGCGTGTGTACTATAAAATGCCTACATTATGTGATTGGTACATTCGAACTTATACATCTGAACTGA

mRNA sequence

ATGCGTCTATCATTGGCAATGTATCCAGATTATCGCATATACTTGTTTAACTTGATGGATTGCTCCGACGCCCAAAACTGTAACTTCCGGTGCGTTAGGTCTCATACAGAAGAAAAAGGAAACAGAGAACAAAAACAATACTCTCTGCTACTACTTCCACCCTCTCTGTTTATTGATTCCTCTTCTTCAGATTCTTCTTGCTTTTTCCTTCAATTCACCTTCCTAATCTCTACAAACCATGGGGTTTCTGCTGAGTTTCTAGTGATTTCACTCTCATGCATGATCGGACTACCCACTCTTCCCTTCCGAATTACCTCCAACCATGGCTTTCTTCCAAGATTGAATTGCTTGGTGCTGCTTAAGTTAGTTTTGGCGTCTTCCAGTTCGTTTTGAGACGGATCGCTTCCGATTGCAGTCGCTTTTTTTCTATTTTGCAGTAGCATCAAGGAGCCCGGTGACAAAAGAAACAACGGCTTCACCATTTATAATTTTTTCAGCGGTTGCTGCTCAGGTCCTTCGATGGAACCCAACTCCTCAGGAGAAGACTTGGTTTTTAAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGCTGGACGGAGGAGGAGCACAATCGATTTTTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATTGAAGAGCATATTGGAACCAAAACTGCAGTCCAGATACGAAGTCATGCACAGAAGTTCTTTTCAAAGTTGGAAAAGGAAGCACTCATTAAGGGAATTCCTGTAGGACAAACTCTTGATATAGATATTCCACCACCTCGGCCGAAGAGGAAACCTAGTAATCCTTACCCAAGGAAAACTCCTATATCAAAGTTGGGTGCAAATGACGGGAAGCTCTTGACTTTGGTGTCTTCTTCACAGAGCAAACAAATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGCCACTAGTGGAGAAGAACAAGCAACTAGCGAAATGGATACTCATGACGATAATTGCTCAGAAGTATTTACCCTTTCACGAGAAGCTAACTTCTTTTCTTGGAAAAACAAAAATTCTGTACCTGCGCAAGTTAAACTGAACCTGAACGACTTGTGTGCTTTCAGGGAGTTTGTGCCTTCATTTAAAGAGCTTGATGCAAAACAGCCACTCCATGATAAAGGCAGGGGCAAGGTTTCAGAATTTGAGATTGCAAGTGCTTCACAAGAAAAAATTGTGTCTGCTGAAAAGAAAGAATCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGTTGCTCATAACTATCCAAGGCATGTGCCTGTGCATGTGGTCGATGGAAGCTTGGGAACAAATGTTCAAGAGTCTGTAACAGACACTCCGCTGCAGGAATCCTCTTTTAATCCAGCAATGGAGATTCCAGGAGAGCATAACATACATCGGAATCCATCTGATTCTGTTTCCTTGGAACGTCAAAATAATGCACCTAGGTGCATTTATCAATCATATCCAACTGTTCACCCCACTCCATTTACCTTACTTCCCCCTAACCAAGAAAATTATAAGTCACTTCTCCACATGTCCTCCTCATTTTCAAATCTCGTTGTGTCTACCCTTCAACAAAACCCTGCAGCCCATGCAATAGCAAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAGCTTCTGTAGATTCTCCCATGTGTGATAAGGAAAGTTTTAGAACCAAGCAAATGAACTCCACCCCAAGTATGGAAGCCATTGCTACAGCAACTGTAGCAGCTGCAACTGCATGGTGGGCGGCCCATGGACTGCTACCTTTATGTGCCCCTTTTCATTCTGCCTTTACCAGTTCTGCTATATCTGCTCCTGTGGCACAACCATCAGATACCTGTCCAAATCCCGAGTCCAAGGACAAAGCAGAAAGTTCCATGCAAATTGATGCAGAACAATCAGAAGCTTTAACTGCTCAACATTCAGGTTCCAAGTCACCTACTCATTCATCATCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGCAAATGCTACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGTTGAGTTTCATGATTCAAACAAGGGAAAGAGGGGAAAACAAGTAGATCGTTCCTCATGTGGTTCCAATACACCATCTGGAAGTGATCAAGAGATAGATGCAACAGAAAATAATGATAAAGAAGAAAAGGAGGAAAAAGAGCTTGAGATGAATTGTCCAGCTTCCGAGTCCAGTAATCGTCGCAGTAGATGCATCAGTAACATAAATGAATCTTGGAAGGAGGTTTCTGATGAGGGGCGGTTGGCTTTTCAAGCTCTCTTCACTCGTGACATATTGCCTCAAAGCTTTTCACCTTCATATAATGTAGAAAACGAGAATGAGAAGAATGAGAATGTTGAGAAAGATAGTAACATTATAGATAAAGATAGTTGTGCATCCGTTATGGACCTTAGCAGCAAGATTTGTGGACCTTCTAGAGATCAAGTTATGGAGAGATACACATCAGCAACAGGTGACAACAATGGAGAGGGAAAAATTCTCACAATTGGACAAGGAAATGGAACACCCAAGGGTTGTCGAACAGGATTCAAACCTTATAAAAGATGTTCAGTGGAGGCAAAGGAAAAGAGAATGACAACATCCAGCAACCACATTGATTGGCATGCAAACGATCAAAGGAAACCTTTATCTGCTGCATGTATATCTAACCTTCCTCGTCAATCTATCTTCCCCACTTTAATTCTTCGCGTGTGTACTATAAAATGCCTACATTATGTGATTGGTACATTCGAACTTATACATCTGAACTGA

Coding sequence (CDS)

ATGGAACCCAACTCCTCAGGAGAAGACTTGGTTTTTAAGACCAGGAAGCCATATACTATTACAAAGCAACGAGAGCGCTGGACGGAGGAGGAGCACAATCGATTTTTAGAGGCGCTGAAGCTCTATGGGCGAGCATGGCAGAGAATTGAAGAGCATATTGGAACCAAAACTGCAGTCCAGATACGAAGTCATGCACAGAAGTTCTTTTCAAAGTTGGAAAAGGAAGCACTCATTAAGGGAATTCCTGTAGGACAAACTCTTGATATAGATATTCCACCACCTCGGCCGAAGAGGAAACCTAGTAATCCTTACCCAAGGAAAACTCCTATATCAAAGTTGGGTGCAAATGACGGGAAGCTCTTGACTTTGGTGTCTTCTTCACAGAGCAAACAAATCTTAGATTTGGAGAAAGAGCCACTGAATGAGGCCACTAGTGGAGAAGAACAAGCAACTAGCGAAATGGATACTCATGACGATAATTGCTCAGAAGTATTTACCCTTTCACGAGAAGCTAACTTCTTTTCTTGGAAAAACAAAAATTCTGTACCTGCGCAAGTTAAACTGAACCTGAACGACTTGTGTGCTTTCAGGGAGTTTGTGCCTTCATTTAAAGAGCTTGATGCAAAACAGCCACTCCATGATAAAGGCAGGGGCAAGGTTTCAGAATTTGAGATTGCAAGTGCTTCACAAGAAAAAATTGTGTCTGCTGAAAAGAAAGAATCTTTAAGCTGCGTACTGTCTGGAGATGAAATGCAAGTTGCTCATAACTATCCAAGGCATGTGCCTGTGCATGTGGTCGATGGAAGCTTGGGAACAAATGTTCAAGAGTCTGTAACAGACACTCCGCTGCAGGAATCCTCTTTTAATCCAGCAATGGAGATTCCAGGAGAGCATAACATACATCGGAATCCATCTGATTCTGTTTCCTTGGAACGTCAAAATAATGCACCTAGGTGCATTTATCAATCATATCCAACTGTTCACCCCACTCCATTTACCTTACTTCCCCCTAACCAAGAAAATTATAAGTCACTTCTCCACATGTCCTCCTCATTTTCAAATCTCGTTGTGTCTACCCTTCAACAAAACCCTGCAGCCCATGCAATAGCAAGTTTGACAGCAACATGTTGGCCCTATGTGAATCCTGAAGCTTCTGTAGATTCTCCCATGTGTGATAAGGAAAGTTTTAGAACCAAGCAAATGAACTCCACCCCAAGTATGGAAGCCATTGCTACAGCAACTGTAGCAGCTGCAACTGCATGGTGGGCGGCCCATGGACTGCTACCTTTATGTGCCCCTTTTCATTCTGCCTTTACCAGTTCTGCTATATCTGCTCCTGTGGCACAACCATCAGATACCTGTCCAAATCCCGAGTCCAAGGACAAAGCAGAAAGTTCCATGCAAATTGATGCAGAACAATCAGAAGCTTTAACTGCTCAACATTCAGGTTCCAAGTCACCTACTCATTCATCATCTGATTCTGAGGGTAGTGGAGGTGCAAATGCAAATGCAAATGCTACGGTGAAACCTGCCCATGACGAGAAGACACCTGCTGAGGTTGAGTTTCATGATTCAAACAAGGGAAAGAGGGGAAAACAAGTAGATCGTTCCTCATGTGGTTCCAATACACCATCTGGAAGTGATCAAGAGATAGATGCAACAGAAAATAATGATAAAGAAGAAAAGGAGGAAAAAGAGCTTGAGATGAATTGTCCAGCTTCCGAGTCCAGTAATCGTCGCAGTAGATGCATCAGTAACATAAATGAATCTTGGAAGGAGGTTTCTGATGAGGGGCGGTTGGCTTTTCAAGCTCTCTTCACTCGTGACATATTGCCTCAAAGCTTTTCACCTTCATATAATGTAGAAAACGAGAATGAGAAGAATGAGAATGTTGAGAAAGATAGTAACATTATAGATAAAGATAGTTGTGCATCCGTTATGGACCTTAGCAGCAAGATTTGTGGACCTTCTAGAGATCAAGTTATGGAGAGATACACATCAGCAACAGGTGACAACAATGGAGAGGGAAAAATTCTCACAATTGGACAAGGAAATGGAACACCCAAGGGTTGTCGAACAGGATTCAAACCTTATAAAAGATGTTCAGTGGAGGCAAAGGAAAAGAGAATGACAACATCCAGCAACCACATTGATTGGCATGCAAACGATCAAAGGAAACCTTTATCTGCTGCATGTATATCTAACCTTCCTCGTCAATCTATCTTCCCCACTTTAATTCTTCGCGTGTGTACTATAAAATGCCTACATTATGTGATTGGTACATTCGAACTTATACATCTGAACTGA

Protein sequence

MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKLLTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKESLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNIHRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATAWWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHIDWHANDQRKPLSAACISNLPRQSIFPTLILRVCTIKCLHYVIGTFELIHLN

Homology

[Close]

BLAST of CmaCh17G005520 vs. ExPASy Swiss-Prot
Match: A0A0G3VTN5 (Protein LATE ELONGATED HYPOCOTYL OS=Petunia hybrida OX=4102 GN=LHY PE=2 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 6.5e-153
Identity = 366/764 (47.91%), Postives = 456/764 (59.69%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+P SSGE+LV KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDPYSSGEELVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKT----PISKLGAN 120
           IRSHAQKFF+KLEKEALIKG+P+ + LDI+IPPPRPKRKPSNPYPRKT    P S++G  
Sbjct: 61  IRSHAQKFFTKLEKEALIKGVPISEALDIEIPPPRPKRKPSNPYPRKTSIAVPTSQVGTK 120

Query: 121 DGKLLT-LVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHD-DNCSEVFTLSREANFF 180
           DGKL T   S  +++ +LDLEKEP+ E+  G E+ ++  +  +  N S+ FTL +E    
Sbjct: 121 DGKLSTPFPSICENRNLLDLEKEPIIESVGGNEKLSNVQENQNKKNFSQGFTLFKEGASA 180

Query: 181 SWKNKNSVPAQVKLNLNDLCAFREFVPSFKE------------------------LDAKQ 240
           +  +     +Q      D C   E V   K                         LDAKQ
Sbjct: 181 ASVSLGK-SSQTLAEPTDSCTLNESVSVSKGVINHDVANKSFPAVESKGHQQLDILDAKQ 240

Query: 241 PLHDKGRGKVSEFEIASASQEKIVSAEKKESLSC-----VLSGDEMQVAHNYPRHVPVHV 300
                     S    +  S EK    E+K+  S        S ++MQV HNYPRHVPVH+
Sbjct: 241 SFQFDSSCNTSSVGKSCQSNEKWAQGEQKDQPSQPDHFEEFSRNDMQVPHNYPRHVPVHI 300

Query: 301 VDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNIHRNPSDSVSLERQNNAPR-CIYQSY 360
           +DG+LG N  ++  D    +S  +    + G  +++ NP+ S + E+ +NA R  I+QS+
Sbjct: 301 LDGTLGANGAQTTPDMFYHKSVSHQVGGLQGLSDMYTNPASSATSEQHSNAARSSIHQSF 360

Query: 361 PTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTLQQNPAAHAIASLTATCWPYVNPEA 420
           P  HP    +  P  ++Y+S L +SS+FS+LVVS L QNPAAHA AS  A+ WPY N EA
Sbjct: 361 PCFHPIFTPIRDP--DDYRSFLQLSSTFSSLVVSALLQNPAAHAAASFAASFWPYANMEA 420

Query: 421 SVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATAWWAAHGLLPLCAPFHSAFTSSAIS 480
            VDS   +  S    Q+NS PSM AIA ATVAAATAWWAAHGLLPLC+PFHS+ T    S
Sbjct: 421 PVDSTGNNTAS----QINSAPSMAAIAAATVAAATAWWAAHGLLPLCSPFHSSLTCVPTS 480

Query: 481 APVAQPSDTCPNPESKDKAESS--------MQIDAEQSEALTAQHSGSKSPTHSSSDSEG 540
           A   Q  D C   E K +             Q   E SEAL  QHS SK PT  SSDS  
Sbjct: 481 ATSMQ-VDVCQPKEGKSEGREGTHNSPPHVQQPGPECSEALQEQHSASKLPTSPSSDSGE 540

Query: 541 SGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGSNTPSGSDQEIDATEN 600
           S G N     T      E+  A  E H+ N  K  KQVDRSSCGSNTPS S+ E DA E 
Sbjct: 541 SEGRNLKNGLTA--TDTEQGAAVTETHEPNAEKVRKQVDRSSCGSNTPSSSEVETDALEK 600

Query: 601 NDKEEKEEKELEMNCPASESSNRRSR-CISNINESWKEVSDEGRLAFQALFTRDILPQSF 660
           ++K ++E +E  +N  A +++NRR R CISN N+SWKEVS+EGR+AFQALF+R++LPQSF
Sbjct: 601 DEKGKEEPEEPNVNLLAGDAANRRGRNCISNSNDSWKEVSEEGRMAFQALFSREVLPQSF 660

Query: 661 SPSYNVENENEKNENVEKDSNIIDKD----SCASVMDLSSKICGPSRDQVMERYTSATGD 715
           S S  ++ +   N + EK     D+     S   + D +S IC  S   V E      G+
Sbjct: 661 SRSNYLKTKG--NIDFEKFQQKPDEQGPSGSQLDLNDQASNICS-SHQAVEENVQFLLGN 720

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BLAST of CmaCh17G005520 vs. ExPASy Swiss-Prot
Match: Q6R0H1 (Protein LHY OS=Arabidopsis thaliana OX=3702 GN=LHY PE=1 SV=2)

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-114
Identity = 305/738 (41.33%), Postives = 395/738 (53.52%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T+      
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTV------ 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
               NK  +P                         KQ   D    K S  + A      +
Sbjct: 181 ----NKYPLP------------------------TKQVSGDIETSKTSTVDNA------V 240

Query: 241 VSAEKKESLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAME 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P  E
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 IPGEHNIHRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFS 360
              E + H N    +     +      +Q++P  H         +Q++Y+S L +SS+FS
Sbjct: 301 ---ETHGHAN----LQATTASATTTASHQAFPACH---------SQDDYRSFLQISSTFS 360

Query: 361 NLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATA 420
           NL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA A
Sbjct: 361 NLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAAA 420

Query: 421 TVAAATAWWAAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQID 480
           TVAAATAWWA+HGLLP+CAP       F++ A+  P     DT  N +  +K        
Sbjct: 421 TVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK-------- 480

Query: 481 AEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKR 540
             Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  ++
Sbjct: 481 --QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQK 540

Query: 541 GKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMNCP-ASESSNRRSRCISN--- 600
              VDRSSCGSNTPSGSD E DA +  +K++++ KE + N P   E +NR+ +   N   
Sbjct: 541 KNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNSN 600

Query: 601 ---INESWKEVSDEGRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKD--SNIIDKD 660
                +SWKEVS+EGR+AFQALF R+ LPQSFSP    EN N K  +       N   +D
Sbjct: 601 NNATTDSWKEVSEEGRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNFKSQD 630

Query: 661 SCASVMDLSSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFKPYKR 719
           SCA+                         D  G   ++ IG G   + K  +TGFKPYKR
Sbjct: 661 SCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFKPYKR 630

[Close]

BLAST of CmaCh17G005520 vs. ExPASy Swiss-Prot
Match: P92973 (Protein CCA1 OS=Arabidopsis thaliana OX=3702 GN=CCA1 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-96
Identity = 293/744 (39.38%), Postives = 380/744 (51.08%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           ME NSSGEDLV KTRKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TKTAVQ
Sbjct: 1   METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTP-----ISKLGA 120
           IRSHAQKFFSK+EKEA  KG+ +GQ LDI IPPPRPKRKP+NPYPRKT      +SK G 
Sbjct: 61  IRSHAQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRKTGSGTILMSKTGV 120

Query: 121 NDGKLLTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFS 180
           NDGK      S  S+++   E    +   S  E+ T +    +DNCS+ FT  +  +  S
Sbjct: 121 NDGK-----ESLGSEKVSHPEMANEDRQQSKPEEKTLQ----EDNCSDCFT-HQYLSAAS 180

Query: 181 WKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVS 240
             NK+ +        ++   FREF+PS +E                       SQ   V 
Sbjct: 181 SMNKSCI------ETSNASTFREFLPSREE----------------------GSQNNRVR 240

Query: 241 AEKKESLSC-VLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEI 300
            E    L+   L     Q    YP H+PV V    LG+++  S++  P +  S       
Sbjct: 241 KESNSDLNAKSLENGNEQGPQTYPMHIPVLV---PLGSSITSSLSHPPSEPDS------- 300

Query: 301 PGEHNIHRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSN 360
               + H    D              YQS+P                            N
Sbjct: 301 ----HPHTVAGD--------------YQSFP----------------------------N 360

Query: 361 LVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATAT 420
            ++STL Q PA +  A+  ++ WP   P++S  SP+           NS P++ A+A AT
Sbjct: 361 HIMSTLLQTPALYTAATFASSFWP---PDSSGGSPV---------PGNSPPNLAAMAAAT 420

Query: 421 VAAATAWWAAHGLLPLCAPFHS-AFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQ 480
           VAAA+AWWAA+GLLPLCAP  S  FTS         PS   P+             D E 
Sbjct: 421 VAAASAWWAANGLLPLCAPLSSGGFTSH-------PPSTFGPS------------CDVEY 480

Query: 481 SEALTAQHSG--SKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRG 540
           ++A T QH    S+   HS +    S   + +     KP   E+  A  E     KG  G
Sbjct: 481 TKASTLQHGSVQSREQEHSEASKARSSLDSEDVENKSKPVCHEQPSATPE--SDAKGSDG 540

Query: 541 ----KQVDRSSCGSNTPSGSDQ-EIDATENNDK----EEKEEKELEMNCPASESSNRRSR 600
               KQVDRSSCGSNTPS SD  E DA+E  +     E KE  E       SES+ RRSR
Sbjct: 541 AGDRKQVDRSSCGSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNKPQTSESNARRSR 599

Query: 601 CISNINESWKEVSDEGRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDS 660
             SNI + WK VSDEGR+AFQALF+R++LPQSF  +Y  E+  E+ +  E+      +  
Sbjct: 601 ISSNITDPWKSVSDEGRIAFQALFSREVLPQSF--TYREEHREEEQQQQEQ------RYP 599

Query: 661 CASVMDLSSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCS 720
            A  ++ ++++  P  DQ  +R T   G      K+++ G         RTGFKPYKRCS
Sbjct: 661 MALDLNFTAQLT-PVDDQEEKRNTGFLGIGLDASKLMSRG---------RTGFKPYKRCS 599

Query: 721 VEAKEKRMTTSSNHIDWHANDQRK 727
           +EAKE R+  ++  I     D ++
Sbjct: 721 MEAKESRILNNNPIIHVEQKDPKR 599

[Close]

BLAST of CmaCh17G005520 vs. ExPASy Swiss-Prot
Match: F4J2J6 (Protein REVEILLE 7-like OS=Arabidopsis thaliana OX=3702 GN=RVE7L PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.6e-34
Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 2   EPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQI 61
           E +S   + V K RKPYT+TKQRE+W+EEEH+RFLEA+KLYGR W++I+EHIGTKTAVQI
Sbjct: 43  ETSSHWIENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQI 102

Query: 62  RSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPI 111
           RSHAQKFFSK+ +EA  +    G    I IPPPRPKRKP++PYPRK+P+
Sbjct: 103 RSHAQKFFSKMAQEADSRS--EGSVKAIVIPPPRPKRKPAHPYPRKSPV 149

[Close]

BLAST of CmaCh17G005520 vs. ExPASy Swiss-Prot
Match: B3H5A8 (Protein REVEILLE 7 OS=Arabidopsis thaliana OX=3702 GN=RVE7 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.6e-34
Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 2   EPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQI 61
           E +S   + V K RKPYT+TKQRE+W+EEEH+RFLEA+KLYGR W++I+EHIGTKTAVQI
Sbjct: 54  ETSSHWIENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQI 113

Query: 62  RSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPI 111
           RSHAQKFFSK+ +EA  +    G    I IPPPRPKRKP++PYPRK+P+
Sbjct: 114 RSHAQKFFSKMAQEADSRS--EGSVKAIVIPPPRPKRKPAHPYPRKSPV 160

[Close]

BLAST of CmaCh17G005520 vs. ExPASy TrEMBL
Match: A0A6J1JSS0 (protein LHY isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1)

HSP 1 Score: 1396.3 bits (3613), Expect = 0.0e+00
Identity = 718/726 (98.90%), Postives = 721/726 (99.31%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI
Sbjct: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL 600

Query: 601 AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ 660
           AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ
Sbjct: 601 AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ 660

Query: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHIDWH 720
           VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH +  
Sbjct: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHSE-- 720

Query: 721 ANDQRK 727
             DQ++
Sbjct: 721 EGDQKR 724

[Close]

BLAST of CmaCh17G005520 vs. ExPASy TrEMBL
Match: A0A6J1JSR5 (protein LHY isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1)

HSP 1 Score: 1390.9 bits (3599), Expect = 0.0e+00
Identity = 718/729 (98.49%), Postives = 721/729 (98.90%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI
Sbjct: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE--- 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE   
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEVKR 600

Query: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660
           GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHI 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHS 720

Query: 721 DWHANDQRK 727
           +    DQ++
Sbjct: 721 E--EGDQKR 727

[Close]

BLAST of CmaCh17G005520 vs. ExPASy TrEMBL
Match: A0A6J1EVB9 (protein LHY isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1)

HSP 1 Score: 1377.5 bits (3564), Expect = 0.0e+00
Identity = 707/726 (97.38%), Postives = 715/726 (98.48%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           +LSCVLSGDEMQVAHNYPRHVPVHVVDGSLG NVQESVTDTPLQESSFNPAME+PGEHNI
Sbjct: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVS ERQNNAPRCIYQSYPTVHP+PFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WW AHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAE EFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL 600
           SNTPSGSDQEIDATENNDKEEKEEKELEM CPASESSNRRSRCISNINESWKEVSDEGRL
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEGRL 600

Query: 601 AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ 660
           AFQALFTRDILPQSFSPSY+VENENEKN NVEKDSNIIDKDSCASVMDL+SKICGPSRDQ
Sbjct: 601 AFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPSRDQ 660

Query: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHIDWH 720
           VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH +  
Sbjct: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHSE-- 720

Query: 721 ANDQRK 727
             DQ++
Sbjct: 721 EGDQKR 724

[Close]

BLAST of CmaCh17G005520 vs. ExPASy TrEMBL
Match: A0A6J1JNZ1 (protein LHY isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1)

HSP 1 Score: 1375.5 bits (3559), Expect = 0.0e+00
Identity = 713/729 (97.81%), Postives = 716/729 (98.22%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKE     PLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKE-----PLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI
Sbjct: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE--- 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE   
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEVKR 600

Query: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660
           GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHI 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHS 720

Query: 721 DWHANDQRK 727
           +    DQ++
Sbjct: 721 E--EGDQKR 722

[Close]

BLAST of CmaCh17G005520 vs. ExPASy TrEMBL
Match: A0A6J1ET90 (protein LHY isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1)

HSP 1 Score: 1372.1 bits (3550), Expect = 0.0e+00
Identity = 707/729 (96.98%), Postives = 715/729 (98.08%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           +LSCVLSGDEMQVAHNYPRHVPVHVVDGSLG NVQESVTDTPLQESSFNPAME+PGEHNI
Sbjct: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVS ERQNNAPRCIYQSYPTVHP+PFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WW AHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAE EFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE--- 600
           SNTPSGSDQEIDATENNDKEEKEEKELEM CPASESSNRRSRCISNINESWKEVSDE   
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEVKR 600

Query: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660
           GRLAFQALFTRDILPQSFSPSY+VENENEKN NVEKDSNIIDKDSCASVMDL+SKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHI 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHS 720

Query: 721 DWHANDQRK 727
           +    DQ++
Sbjct: 721 E--EGDQKR 727

[Close]

BLAST of CmaCh17G005520 vs. NCBI nr
Match: XP_022992151.1 (protein LHY isoform X2 [Cucurbita maxima])

HSP 1 Score: 1396.3 bits (3613), Expect = 0.0e+00
Identity = 718/726 (98.90%), Postives = 721/726 (99.31%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI
Sbjct: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL 600

Query: 601 AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ 660
           AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ
Sbjct: 601 AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ 660

Query: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHIDWH 720
           VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH +  
Sbjct: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHSE-- 720

Query: 721 ANDQRK 727
             DQ++
Sbjct: 721 EGDQKR 724

[Close]

BLAST of CmaCh17G005520 vs. NCBI nr
Match: XP_022992145.1 (protein LHY isoform X1 [Cucurbita maxima] >XP_022992146.1 protein LHY isoform X1 [Cucurbita maxima] >XP_022992147.1 protein LHY isoform X1 [Cucurbita maxima] >XP_022992148.1 protein LHY isoform X1 [Cucurbita maxima] >XP_022992149.1 protein LHY isoform X1 [Cucurbita maxima] >XP_022992150.1 protein LHY isoform X1 [Cucurbita maxima])

HSP 1 Score: 1390.9 bits (3599), Expect = 0.0e+00
Identity = 718/729 (98.49%), Postives = 721/729 (98.90%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI
Sbjct: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE--- 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE   
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEVKR 600

Query: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660
           GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHI 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHS 720

Query: 721 DWHANDQRK 727
           +    DQ++
Sbjct: 721 E--EGDQKR 727

[Close]

BLAST of CmaCh17G005520 vs. NCBI nr
Match: XP_023549455.1 (protein LHY isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 708/726 (97.52%), Postives = 715/726 (98.48%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVS EKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSVEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           +LSCVLSGDEMQVAHNYPRHVPVHVVDGSLG NVQESVTDTPLQESSFNPAME+PGEHNI
Sbjct: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVS ERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEK PAE EFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKKPAEDEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL 600
           SNTPSGSDQEIDATENNDKEEKEEKELEM CPASESSNRRSRCISNINESWKEVSDEGRL
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEGRL 600

Query: 601 AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ 660
           AFQALFTRDILPQSFSPSY+VENENEKNENVEKDSNIIDKDSCASVMDL+SKICGPSRDQ
Sbjct: 601 AFQALFTRDILPQSFSPSYDVENENEKNENVEKDSNIIDKDSCASVMDLNSKICGPSRDQ 660

Query: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHIDWH 720
           VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH +  
Sbjct: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHSE-- 720

Query: 721 ANDQRK 727
             DQ++
Sbjct: 721 EGDQKR 724

[Close]

BLAST of CmaCh17G005520 vs. NCBI nr
Match: XP_022929805.1 (protein LHY isoform X2 [Cucurbita moschata])

HSP 1 Score: 1377.5 bits (3564), Expect = 0.0e+00
Identity = 707/726 (97.38%), Postives = 715/726 (98.48%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           +LSCVLSGDEMQVAHNYPRHVPVHVVDGSLG NVQESVTDTPLQESSFNPAME+PGEHNI
Sbjct: 241 ALSCVLSGDEMQVAHNYPRHVPVHVVDGSLGANVQESVTDTPLQESSFNPAMEVPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVS ERQNNAPRCIYQSYPTVHP+PFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSFERQNNAPRCIYQSYPTVHPSPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WW AHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWTAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAE EFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEDEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEGRL 600
           SNTPSGSDQEIDATENNDKEEKEEKELEM CPASESSNRRSRCISNINESWKEVSDEGRL
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMTCPASESSNRRSRCISNINESWKEVSDEGRL 600

Query: 601 AFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPSRDQ 660
           AFQALFTRDILPQSFSPSY+VENENEKN NVEKDSNIIDKDSCASVMDL+SKICGPSRDQ
Sbjct: 601 AFQALFTRDILPQSFSPSYDVENENEKNGNVEKDSNIIDKDSCASVMDLNSKICGPSRDQ 660

Query: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHIDWH 720
           VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH +  
Sbjct: 661 VMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHSE-- 720

Query: 721 ANDQRK 727
             DQ++
Sbjct: 721 EGDQKR 724

[Close]

BLAST of CmaCh17G005520 vs. NCBI nr
Match: XP_022992152.1 (protein LHY isoform X3 [Cucurbita maxima])

HSP 1 Score: 1375.5 bits (3559), Expect = 0.0e+00
Identity = 713/729 (97.81%), Postives = 716/729 (98.22%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120
           IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
Sbjct: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL 120

Query: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180
           LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
Sbjct: 121 LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN 180

Query: 181 SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE 240
           SVPAQVKLNLNDLCAFREFVPSFKE     PLHDKGRGKVSEFEIASASQEKIVSAEKKE
Sbjct: 181 SVPAQVKLNLNDLCAFREFVPSFKE-----PLHDKGRGKVSEFEIASASQEKIVSAEKKE 240

Query: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300
           SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI
Sbjct: 241 SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI 300

Query: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360
           HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
Sbjct: 301 HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL 360

Query: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420
           QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
Sbjct: 361 QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA 420

Query: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480
           WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
Sbjct: 421 WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ 480

Query: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540
           HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG
Sbjct: 481 HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG 540

Query: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE--- 600
           SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDE   
Sbjct: 541 SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEVKR 600

Query: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660
           GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS
Sbjct: 601 GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS 660

Query: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHI 720
           RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNH 
Sbjct: 661 RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHS 720

Query: 721 DWHANDQRK 727
           +    DQ++
Sbjct: 721 E--EGDQKR 722

[Close]

BLAST of CmaCh17G005520 vs. TAIR 10
Match: AT1G01060.4 (Homeodomain-like superfamily protein )

HSP 1 Score: 415.6 bits (1067), Expect = 8.6e-116
Identity = 303/738 (41.06%), Postives = 393/738 (53.25%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T++     
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTVN----- 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
                                              K PL  K  G + E    S     +
Sbjct: 181 -----------------------------------KYPLPTKVSGDI-ETSKTSTVDNAV 240

Query: 241 VSAEKKESLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAME 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P  E
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 IPGEHNIHRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFS 360
              E + H N    +     +      +Q++P  H         +Q++Y+S L +SS+FS
Sbjct: 301 ---ETHGHAN----LQATTASATTTASHQAFPACH---------SQDDYRSFLQISSTFS 360

Query: 361 NLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATA 420
           NL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA A
Sbjct: 361 NLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAAA 420

Query: 421 TVAAATAWWAAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQID 480
           TVAAATAWWA+HGLLP+CAP       F++ A+  P     DT  N +  +K        
Sbjct: 421 TVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK-------- 480

Query: 481 AEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKR 540
             Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  ++
Sbjct: 481 --QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQK 540

Query: 541 GKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMNCP-ASESSNRRSRCISN--- 600
              VDRSSCGSNTPSGSD E DA +  +K++++ KE + N P   E +NR+ +   N   
Sbjct: 541 KNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNSN 600

Query: 601 ---INESWKEVSDEGRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKD--SNIIDKD 660
                +SWKEVS+EGR+AFQALF R+ LPQSFSP    EN N K  +       N   +D
Sbjct: 601 NNATTDSWKEVSEEGRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNFKSQD 629

Query: 661 SCASVMDLSSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFKPYKR 719
           SCA+                         D  G   ++ IG G   + K  +TGFKPYKR
Sbjct: 661 SCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFKPYKR 629

[Close]

BLAST of CmaCh17G005520 vs. TAIR 10
Match: AT1G01060.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 415.2 bits (1066), Expect = 1.1e-115
Identity = 305/738 (41.33%), Postives = 395/738 (53.52%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T+      
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTV------ 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
               NK  +P                         KQ   D    K S  + A      +
Sbjct: 181 ----NKYPLP------------------------TKQVSGDIETSKTSTVDNA------V 240

Query: 241 VSAEKKESLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAME 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P  E
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 IPGEHNIHRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFS 360
              E + H N    +     +      +Q++P  H         +Q++Y+S L +SS+FS
Sbjct: 301 ---ETHGHAN----LQATTASATTTASHQAFPACH---------SQDDYRSFLQISSTFS 360

Query: 361 NLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATA 420
           NL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA A
Sbjct: 361 NLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAAA 420

Query: 421 TVAAATAWWAAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQID 480
           TVAAATAWWA+HGLLP+CAP       F++ A+  P     DT  N +  +K        
Sbjct: 421 TVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK-------- 480

Query: 481 AEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKR 540
             Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  ++
Sbjct: 481 --QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQK 540

Query: 541 GKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMNCP-ASESSNRRSRCISN--- 600
              VDRSSCGSNTPSGSD E DA +  +K++++ KE + N P   E +NR+ +   N   
Sbjct: 541 KNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNSN 600

Query: 601 ---INESWKEVSDEGRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKD--SNIIDKD 660
                +SWKEVS+EGR+AFQALF R+ LPQSFSP    EN N K  +       N   +D
Sbjct: 601 NNATTDSWKEVSEEGRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNFKSQD 630

Query: 661 SCASVMDLSSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFKPYKR 719
           SCA+                         D  G   ++ IG G   + K  +TGFKPYKR
Sbjct: 661 SCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFKPYKR 630

[Close]

BLAST of CmaCh17G005520 vs. TAIR 10
Match: AT1G01060.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 415.2 bits (1066), Expect = 1.1e-115
Identity = 305/738 (41.33%), Postives = 395/738 (53.52%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T+      
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTV------ 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
               NK  +P                         KQ   D    K S  + A      +
Sbjct: 181 ----NKYPLP------------------------TKQVSGDIETSKTSTVDNA------V 240

Query: 241 VSAEKKESLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAME 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P  E
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 IPGEHNIHRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFS 360
              E + H N    +     +      +Q++P  H         +Q++Y+S L +SS+FS
Sbjct: 301 ---ETHGHAN----LQATTASATTTASHQAFPACH---------SQDDYRSFLQISSTFS 360

Query: 361 NLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATA 420
           NL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA A
Sbjct: 361 NLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAAA 420

Query: 421 TVAAATAWWAAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQID 480
           TVAAATAWWA+HGLLP+CAP       F++ A+  P     DT  N +  +K        
Sbjct: 421 TVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK-------- 480

Query: 481 AEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKR 540
             Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  ++
Sbjct: 481 --QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQK 540

Query: 541 GKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMNCP-ASESSNRRSRCISN--- 600
              VDRSSCGSNTPSGSD E DA +  +K++++ KE + N P   E +NR+ +   N   
Sbjct: 541 KNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNSN 600

Query: 601 ---INESWKEVSDEGRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKD--SNIIDKD 660
                +SWKEVS+EGR+AFQALF R+ LPQSFSP    EN N K  +       N   +D
Sbjct: 601 NNATTDSWKEVSEEGRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNFKSQD 630

Query: 661 SCASVMDLSSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFKPYKR 719
           SCA+                         D  G   ++ IG G   + K  +TGFKPYKR
Sbjct: 661 SCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFKPYKR 630

[Close]

BLAST of CmaCh17G005520 vs. TAIR 10
Match: AT1G01060.3 (Homeodomain-like superfamily protein )

HSP 1 Score: 415.2 bits (1066), Expect = 1.1e-115
Identity = 305/738 (41.33%), Postives = 395/738 (53.52%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           M+ N+SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQ
Sbjct: 1   MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRK-----TPISKL-G 120
           IRSHAQKFF+KLEKEA +KGIPV Q LDI+IPPPRPKRKP+ PYPRK     T  S++  
Sbjct: 61  IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS 120

Query: 121 ANDGKLLTLVSSSQSKQ-ILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANF 180
           A D KL++  SSSQ  Q  LDLEK P +E TS      +  +  D+NCS V T+      
Sbjct: 121 AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTS------TGKENQDENCSGVSTV------ 180

Query: 181 FSWKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKI 240
               NK  +P                         KQ   D    K S  + A      +
Sbjct: 181 ----NKYPLP------------------------TKQVSGDIETSKTSTVDNA------V 240

Query: 241 VSAEKKESLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAME 300
               KK        G  +    NYP H    +V+G++    Q   +    Q+  F+P  E
Sbjct: 241 QDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPSGMVSQDFMFHPMRE 300

Query: 301 IPGEHNIHRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFS 360
              E + H N    +     +      +Q++P  H         +Q++Y+S L +SS+FS
Sbjct: 301 ---ETHGHAN----LQATTASATTTASHQAFPACH---------SQDDYRSFLQISSTFS 360

Query: 361 NLVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATA 420
           NL++STL QNPAAHA A+  A+ WPY +   S DS         T   +S PS+ AIA A
Sbjct: 361 NLIMSTLLQNPAAHAAATFAASVWPYASVGNSGDS--------STPMSSSPPSITAIAAA 420

Query: 421 TVAAATAWWAAHGLLPLCAPFHSA---FTSSAISAPVAQPSDTCPNPESKDKAESSMQID 480
           TVAAATAWWA+HGLLP+CAP       F++ A+  P     DT  N +  +K        
Sbjct: 421 TVAAATAWWASHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEK-------- 480

Query: 481 AEQSEALTAQHSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKR 540
             Q+ AL  Q+  SKSP  SS DS+ +G    NA++       E+       HDSN  ++
Sbjct: 481 --QNTALQDQNLASKSPASSSDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQK 540

Query: 541 GKQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEKELEMNCP-ASESSNRRSRCISN--- 600
              VDRSSCGSNTPSGSD E DA +  +K++++ KE + N P   E +NR+ +   N   
Sbjct: 541 KNLVDRSSCGSNTPSGSDAETDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNSN 600

Query: 601 ---INESWKEVSDEGRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKD--SNIIDKD 660
                +SWKEVS+EGR+AFQALF R+ LPQSFSP    EN N K  +       N   +D
Sbjct: 601 NNATTDSWKEVSEEGRIAFQALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNFKSQD 630

Query: 661 SCASVMDLSSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGN-GTPKGCRTGFKPYKR 719
           SCA+                         D  G   ++ IG G   + K  +TGFKPYKR
Sbjct: 661 SCAA-------------------------DQEG---VVMIGVGTCKSLKTRQTGFKPYKR 630

[Close]

BLAST of CmaCh17G005520 vs. TAIR 10
Match: AT2G46830.1 (circadian clock associated 1 )

HSP 1 Score: 355.5 bits (911), Expect = 1.1e-97
Identity = 293/744 (39.38%), Postives = 380/744 (51.08%), Query Frame = 0


Query: 1   MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60
           ME NSSGEDLV KTRKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TKTAVQ
Sbjct: 1   METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60

Query: 61  IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTP-----ISKLGA 120
           IRSHAQKFFSK+EKEA  KG+ +GQ LDI IPPPRPKRKP+NPYPRKT      +SK G 
Sbjct: 61  IRSHAQKFFSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRKTGSGTILMSKTGV 120

Query: 121 NDGKLLTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFS 180
           NDGK      S  S+++   E    +   S  E+ T +    +DNCS+ FT  +  +  S
Sbjct: 121 NDGK-----ESLGSEKVSHPEMANEDRQQSKPEEKTLQ----EDNCSDCFT-HQYLSAAS 180

Query: 181 WKNKNSVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVS 240
             NK+ +        ++   FREF+PS +E                       SQ   V 
Sbjct: 181 SMNKSCI------ETSNASTFREFLPSREE----------------------GSQNNRVR 240

Query: 241 AEKKESLSC-VLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEI 300
            E    L+   L     Q    YP H+PV V    LG+++  S++  P +  S       
Sbjct: 241 KESNSDLNAKSLENGNEQGPQTYPMHIPVLV---PLGSSITSSLSHPPSEPDS------- 300

Query: 301 PGEHNIHRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSN 360
               + H    D              YQS+P                            N
Sbjct: 301 ----HPHTVAGD--------------YQSFP----------------------------N 360

Query: 361 LVVSTLQQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATAT 420
            ++STL Q PA +  A+  ++ WP   P++S  SP+           NS P++ A+A AT
Sbjct: 361 HIMSTLLQTPALYTAATFASSFWP---PDSSGGSPV---------PGNSPPNLAAMAAAT 420

Query: 421 VAAATAWWAAHGLLPLCAPFHS-AFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQ 480
           VAAA+AWWAA+GLLPLCAP  S  FTS         PS   P+             D E 
Sbjct: 421 VAAASAWWAANGLLPLCAPLSSGGFTSH-------PPSTFGPS------------CDVEY 480

Query: 481 SEALTAQHSG--SKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRG 540
           ++A T QH    S+   HS +    S   + +     KP   E+  A  E     KG  G
Sbjct: 481 TKASTLQHGSVQSREQEHSEASKARSSLDSEDVENKSKPVCHEQPSATPE--SDAKGSDG 540

Query: 541 ----KQVDRSSCGSNTPSGSDQ-EIDATENNDK----EEKEEKELEMNCPASESSNRRSR 600
               KQVDRSSCGSNTPS SD  E DA+E  +     E KE  E       SES+ RRSR
Sbjct: 541 AGDRKQVDRSSCGSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNKPQTSESNARRSR 599

Query: 601 CISNINESWKEVSDEGRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDS 660
             SNI + WK VSDEGR+AFQALF+R++LPQSF  +Y  E+  E+ +  E+      +  
Sbjct: 601 ISSNITDPWKSVSDEGRIAFQALFSREVLPQSF--TYREEHREEEQQQQEQ------RYP 599

Query: 661 CASVMDLSSKICGPSRDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCS 720
            A  ++ ++++  P  DQ  +R T   G      K+++ G         RTGFKPYKRCS
Sbjct: 661 MALDLNFTAQLT-PVDDQEEKRNTGFLGIGLDASKLMSRG---------RTGFKPYKRCS 599

Query: 721 VEAKEKRMTTSSNHIDWHANDQRK 727
           +EAKE R+  ++  I     D ++
Sbjct: 721 MEAKESRILNNNPIIHVEQKDPKR 599

The following BLAST results are available for this feature:

BLAST of CmaCh17G005520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A0G3VTN5	6.5e-153	47.91	Protein LATE ELONGATED HYPOCOTYL OS=Petunia hybrida OX=4102 GN=LHY PE=2 SV=1	[more]
Q6R0H1	1.6e-114	41.33	Protein LHY OS=Arabidopsis thaliana OX=3702 GN=LHY PE=1 SV=2	[more]
P92973	1.5e-96	39.38	Protein CCA1 OS=Arabidopsis thaliana OX=3702 GN=CCA1 PE=1 SV=1	[more]
F4J2J6	3.6e-34	66.06	Protein REVEILLE 7-like OS=Arabidopsis thaliana OX=3702 GN=RVE7L PE=3 SV=1	[more]
B3H5A8	3.6e-34	66.06	Protein REVEILLE 7 OS=Arabidopsis thaliana OX=3702 GN=RVE7 PE=2 SV=1	[more]

BLAST of CmaCh17G005520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSS0	0.0e+00	98.90	protein LHY isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1	[more]
A0A6J1JSR5	0.0e+00	98.49	protein LHY isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1	[more]
A0A6J1EVB9	0.0e+00	97.38	protein LHY isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1	[more]
A0A6J1JNZ1	0.0e+00	97.81	protein LHY isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488569 PE=4 SV=1	[more]
A0A6J1ET90	0.0e+00	96.98	protein LHY isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436302 PE=4 SV=1	[more]

BLAST of CmaCh17G005520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992151.1	0.0e+00	98.90	protein LHY isoform X2 [Cucurbita maxima]	[more]
XP_022992145.1	0.0e+00	98.49	protein LHY isoform X1 [Cucurbita maxima] >XP_022992146.1 protein LHY isoform X1...	[more]
XP_023549455.1	0.0e+00	97.52	protein LHY isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022929805.1	0.0e+00	97.38	protein LHY isoform X2 [Cucurbita moschata]	[more]
XP_022992152.1	0.0e+00	97.81	protein LHY isoform X3 [Cucurbita maxima]	[more]

BLAST of CmaCh17G005520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01060.4	8.6e-116	41.06	Homeodomain-like superfamily protein	[more]
AT1G01060.1	1.1e-115	41.33	Homeodomain-like superfamily protein	[more]
AT1G01060.2	1.1e-115	41.33	Homeodomain-like superfamily protein	[more]
AT1G01060.3	1.1e-115	41.33	Homeodomain-like superfamily protein	[more]
AT2G46830.1	1.1e-97	39.38	circadian clock associated 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 550..570
None	No IPR available	GENE3D	1.10.10.60		coord: 26..73 e-value: 8.4E-18 score: 66.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 446..581
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 552..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 512..534
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 535..551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..158
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 2..715
None	No IPR available	PANTHER	PTHR12802:SF109	PROTEIN LHY	coord: 2..715
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 23..71 e-value: 7.3E-13 score: 58.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 19..69 score: 7.166258
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 26..69 e-value: 3.29579E-10 score: 53.7334
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 24..67 e-value: 2.7E-13 score: 49.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 19..73 score: 21.091417
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 22..71 e-value: 8.4E-17 score: 59.2
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 22..73 score: 11.205126
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 18..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005520.1	CmaCh17G005520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding