CmaCh17G005060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G005060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	serine/arginine repetitive matrix protein 1
Location	Cma_Chr17: 3323580 .. 3328373 (+)
RNA-Seq Expression	CmaCh17G005060
Synteny	CmaCh17G005060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGTGTTAGCCACAAACTAAGAACCATGTGGGCTGCCTTCTCAACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTGCCAACCAGGCCGCTTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGACACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAAATCCACAAATCCCAAATCCCGCAGCCCCATACGAAAACAGGAATCGCAATTGGAGACTGCCAAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAACCCGACAAGTGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTACTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGGTTTGATGATTCTATCATTCTCTTTTTATTACAATTGTCAATGAATTTTATATTCATGTGCAGTGTTTATTAGAATTGTCAATGAGTTCCCAACATTTGAATATGAATCCATGTTAAATCACTGCTGTATATATGACTTTTAATATTGTATGCACATTCTTTATGCCACTCCTCCATTTGGGAACCCTTCTGAGCTTTGTTCTGACTGTTGAAATAGATGAAGAAACTACCACTTCTTTGTCATGGTTAGTGGCTCTTTCTTGTTGTGCTTGTTGGTCAGAAATTAAAAGGGTTTTGTTGAGAATTGTTAGGTGGAGAGTCGCTGATTAAGAGGAAGTTCATCGGTTTATAAGCAAGGATTGTATGAGGCATTTTGAGGAAACCAAAAGCAAAGTCACAAGAGCTGATGCTCAAAGTGAACCATCGTACCATTGTGGAGAGTCGTAGTTCCTATCGGTGTCTTGATAGAAACCATAGGTCACCCACCTTAATAATTTCTGCACACCCTATGAGTCTTACAAAGCTTCCAAGACCCATCTCTAGAAGAACTCTATATAGATAGAGACTAAAGTGACAGAGTCTTGCCATAACATGTGAGCCCAGAAATGATAGCCATATGATGCCCAAGCTTCCTAGGACTAGATTGTATCTGCTTGCTACATTCGTGAAACAGATAGGAAGGAGACAATAGGGAATTATAATGGACAAAAAAGAAACAAGTCCAAATAGGAATGAGTGTCTCATCAAGCTGCAGGAAGAGTCCTCTGCTTCAGACTTACGAGTCAGAGGTAAGTAACAGATCATGAGGATTGTTGGGAGAAGAGTCCCATATCGGCAAATTAAGGGGTTGATCATGGGTTTATGCGAGGAATACATCTCCATCCGTATGAAGCCTTTTGGGGAAATAAAAAACAAAGCCACGAGAGCTTATGCTCAAAGTTGACAACATTATATCATTGTGGAGAGTCGTAGTTTTGAACATGGCATCAAAGCCATGCTCTTAACTTAGTCATGCCAATAAAATCCTCAAGTGTCGAACAAATAAGTTGTGAGCCATAAAAGTATAGTCAAAAGTGACTCAAGTGTCGAATAAAGGGTGTTTTGTTCAAGGACTTGATTAAGGGGAGACTGTTCGAGTGTTCCATAGGACCTCAGGGGAGGTTCCATGGGCCATTGTGGAGAGTCGTAATTTCTAACAACAGAGTGACGTAGCTTTAGAGATTCAACCCTTGTTATATTTTCTTGAACAAGAAAGACTGGATGTTTTCGTTACTGATAGCATAAATCTCTGGAAACTTTTATGGGATCGGGGATCGAGTCTTCTAAACATGGTCTTTTTAAGTTATTGTTTAGACCAAAGTCATGATACTCTTTTATGAAATCAACTTATGCATACATTGTGCTCCTTCTTTTAGCCTCAAATCACGGCTATAACAACATTACAATCTGTCCCAAAACTGCATAGTAATAGATGATGCACTCCTTGGATTTGGGGATCTCTTTGATCTTTCTTGGTGCGCTCTAAGAGAAACTGTTACTTTACAGGTTTGTTTAAATTATTGTTAATTTAAACAAATCTTTGAACCCTTTTATGCCTGCAATAACGTGATCCTGTTTTGGTGGAATTCTCCTTACAATTGTTTCCATTTTCTTCTCTGATCAAGTGGTAAAAAAATTTCCACTGAAAATGCAACTTAACAATGATAGATATATGTAACTCTTTTTTAGAGTTTCCATTGTAATTTGATTATTTAGGTTTGTTTTTATGGTAGGCGTTAATAATATCCCTAAACTTTCACACGTTTCATTTTGTTTCAAAATAACCTTTTTGGGAAGTTTTCAGCTAAAATGAAGGTGGAGAGAGATGTGGCATAGGTGTATGTTTCAATTATCAATGTTGCTCGTGAACTTTAGTGTATGCTTCAATATTTTCAAACTTTAACTTTTGAAATTGTTTCAAAATAACCATTGTATTTGTTTTCTAGTTATGAGCCGGAGAAAGACACCAAATAATCTTAGTTACATTCAAAACGAAGCTTTATATAAGGGTGGAAAAAAAAGGGAGATTATGGCAAAATATTGTTTCCTTCCCCATTAAAAAAATTTGAGGGAATTTAAAATTTTACTAATCCAGAAGGGAACGACAAAAACTTAAGTTGTAGGGATGCCCCAAAACACTAGGATGTTACTCTTTTTCTTTATTGCTCTTCTACCGTCGCTTTCAATTGACTTTTCTCCTATCCACCGAATTTTAGCGGCATAAATGAAAATTGAACCAATATCACGTATACTATCCTTTTACAAGTCATTATCACATCACTTTTCCGTCTTCCTTTAATGGAATAGTTGACATAAACATTATCTTGTAAGTTTAAGAGTGAAACTATTGAAAATAGAATTAATCTTCCCTTATTACTAAGAAGCATAAACACCTTATGGACATGTACACATACTGATCTCTTGTTAGTGCAATAGATGTGTTAGACATTCTTTGTACTAAGCCAAAAAGTAGGTCCGACGTTTGTTTGAGATGCACCAACACTCCGATAAGCATATGAAAGAAACAAAAATAATACAATTTAGAGGAATGTTAGATTCTTAGAATGAAAATGAAGAGAAGAAAATTATTGCATTCCCCAACTGTGTGGACTTGTTTATCATCTCAGCCACCTCCTGAGATCAGTGGTTGATGATGGAGAAACCTCTCCTCCATAGCTCTCTGTATAGCAAGAAGAATAGTTAGACTGATCCTCCAACCCACCATACCTTCCATAAGCACTCTTAAAACTTGGACTCTTCATCTCATTCCCATGAACACCACCACACCCCACCACTCTACTGTATGGATCTGGCGGTACCGGAAACGATAGCCGTTTCCTTGCAGTCCCAACTCGTTCCCTTTCCGGAGTTGCAGGCCTTTGCCTCGGTGCACTCTGTGACCGGACTCGAGCCTTGGCTGACTCTGTTGCAGCCATGTAATTAGGCAGTGAAGTTTCACCAATACCACCCCCTTTGTGATGTTGATGTTTAGACCTCAAGCTTGGCGTTTGAGGTGTAATGTGGTGGCTAATTTGGTTTCTATCTTCTCTGTTGTAGCGAGGACTTGCCGACCGAATTTGCTGGACTGGTCGGGATTTTGACGGGGACGGGGTGATGGGGAATTGGCTGTGATGGGCTCTATGGAGTGGGGAGGAAGATGGAAGCATGTTTGATCTTTGTGATTGAATTTGATAATTGGTAGTGTGGAAATTGTTGGGAGATAAGTAAGTGTATGGTCGAGAGGTGTCAATTTCAAGCGTTTTAAGTGGCTGTGGTCTGTTATCAGTGGAAGCTCTTGCCCTGCTCTCCCATGGCTTCTTAGCCATCCAATGATCCAGCCATTTTGATCCTTCTTCAAGCTCCATTTGGTTTCCTATTGATGGGCTCCTTCCAGTCCTCCATATCTAAAACATGTTTAGCATTCAAAACATAACAATTGTTGATTAAACGATGGAATGAGATATGAATTCAAACCTGTTGAGAAAAGGATTGAGATAAAATGTTGTCACGATTCAAAGCAGAGTCTCGTCTGTGTTGTAACATTGCCTTAACTTGTTCAACAGTGTGAGCACGTTCATCCCAGTCGTCTGTAACGCTGCTTCCTTCTCTTGATACACATTTGTCTTGAACATAGCGAGATTCATAGATACTGTTGGTATCGCTGAAGGTGGACCGTCGGCTGCCTTCAAGGGAGAGCCGCATACGGTGATCCAACACTTTCTCTTGTACTCTAACTAATGCTTTCATGCACTGCAGGGTTGTCTTTGCTTGTTTCCTTACATTATGGCCTCTCACCAATGCCTGCAACTTCACCAGCCCCTTCAGTGCCCGTAGAGCCCTCCTTGCCTTCCAAAATTCAAAAGTTAAAAAGGGTATCTATTCACATTATGACAAATTTACAGAGTTGAGAGCTCACCAGATATCCTCGAAAGGCGGTTTGAATGAGAATGGCAGAGTAAGAATGGCGATCCAATGGAGCAGGGGCAGGGGTGGTGAGGTGAAGAGGTTGTGCAGCCGGTGTGGCATGTTTGTGATCAGTGGGGAGAGGCGGTTGGAGGGGAGGGAGTGGCTCCGGCGGCTGAGATGCTGATTTTCTGAAAATCCAGCGGCGTTTCTCCCGCCTCTGCAGAAAAAAGTAGGACGAATCAGAAGAAGAAGAAGGAAATGAAAATTAAAGGGTACCTTTTGGTCATCATCTTTGGTGGGAGATCTGAAAGCCCTTTTGACGGCGGTCAGCCATGA

mRNA sequence

CTTGGTGTTAGCCACAAACTAAGAACCATGTGGGCTGCCTTCTCAACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTGCCAACCAGGCCGCTTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGACACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAAATCCACAAATCCCAAATCCCGCAGCCCCATACGAAAACAGGAATCGCAATTGGAGACTGCCAAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAACCCGACAAGTGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTACTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGCGAGGACTTGCCGACCGAATTTGCTGGACTGGTCGGGATTTTGACGGGGACGGGATACTGTTGGTATCGCTGAAGGTGGACCGTCGGCTGCCTTCAAGGGAGAGCCGCATACGGGTTGTCTTTGCTTGTTTCCTTACATTATGGCCTCTCACCAATGCCTGCAACTTCACCAGCCCCTTCAGTGCCCGTAGAGCCCTCCTTGCCTTCCAAAATTCAAAAGTTAAAAAGGGTATCTATTCACATTATGACAAATTTACAGAGTTGAGAGCTCACCAGATATCCTCGAAAGGCGGTTTGAATGAGAATGGCAGAGTAAGAATGGCGATCCAATGGAGCAGGGGCAGGGGTGGTGAGGTGAAGAGGTTGTGCAGCCGGTGTGGCATCGGCGTTTCTCCCGCCTCTGCAGAAAAAAGTAGGACGAATCAGAAGAAGAAGAAGGAAATGAAAATTAAAGGGTACCTTTTGGTCATCATCTTTGGTGGGAGATCTGAAAGCCCTTTTGACGGCGGTCAGCCATGA

Coding sequence (CDS)

ATGTGGGCTGCCTTCTCAACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTGCCAACCAGGCCGCTTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGACACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAAATCCACAAATCCCAAATCCCGCAGCCCCATACGAAAACAGGAATCGCAATTGGAGACTGCCAAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAACCCGACAAGTGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTACTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGCGAGGACTTGCCGACCGAATTTGCTGGACTGGTCGGGATTTTGACGGGGACGGGATACTGTTGGTATCGCTGAAGGTGGACCGTCGGCTGCCTTCAAGGGAGAGCCGCATACGGGTTGTCTTTGCTTGTTTCCTTACATTATGGCCTCTCACCAATGCCTGCAACTTCACCAGCCCCTTCAGTGCCCGTAGAGCCCTCCTTGCCTTCCAAAATTCAAAAGTTAAAAAGGGTATCTATTCACATTATGACAAATTTACAGAGTTGAGAGCTCACCAGATATCCTCGAAAGGCGGTTTGAATGAGAATGGCAGAGTAAGAATGGCGATCCAATGGAGCAGGGGCAGGGGTGGTGAGGTGAAGAGGTTGTGCAGCCGGTGTGGCATCGGCGTTTCTCCCGCCTCTGCAGAAAAAAGTAGGACGAATCAGAAGAAGAAGAAGGAAATGAAAATTAAAGGGTACCTTTTGGTCATCATCTTTGGTGGGAGATCTGAAAGCCCTTTTGACGGCGGTCAGCCATGA

Protein sequence

MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKILSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETRGLADRICWTGRDFDGDGILLVSLKVDRRLPSRESRIRVVFACFLTLWPLTNACNFTSPFSARRALLAFQNSKVKKGIYSHYDKFTELRAHQISSKGGLNENGRVRMAIQWSRGRGGEVKRLCSRCGIGVSPASAEKSRTNQKKKKEMKIKGYLLVIIFGGRSESPFDGGQP

Homology

[Close]

BLAST of CmaCh17G005060 vs. ExPASy TrEMBL
Match: A0A6J1L2U1 (uncharacterized protein LOC111499329 OS=Cucurbita maxima OX=3661 GN=LOC111499329 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 2.0e-80
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI
Sbjct: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60

Query: 61  LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP 120
           LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP
Sbjct: 61  LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP 120

Query: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 163
           PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET
Sbjct: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 162

[Close]

BLAST of CmaCh17G005060 vs. ExPASy TrEMBL
Match: A0A6J1H4Y8 (uncharacterized protein LOC111460438 OS=Cucurbita moschata OX=3662 GN=LOC111460438 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.7e-76
Identity = 155/162 (95.68%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MW AFSTSPSPSCCRLPLPTRP PTPPVSAIYAKAQPP+TDADNATPNNS+SIKSFGHKI
Sbjct: 1   MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKI 60

Query: 61  LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP 120
           LSAA STNPKSRSPIRKQESQLETA+ISGLDVLRALQKAAAVKEKNRTRQ KEQKKDGPP
Sbjct: 61  LSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPP 120

Query: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 163
           PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET
Sbjct: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 162

[Close]

BLAST of CmaCh17G005060 vs. ExPASy TrEMBL
Match: A0A5D3DMB8 (Chaperone ClpB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002990 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40
Identity = 106/164 (64.63%), Postives = 121/164 (73.78%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAA STSPSPS  RLP+ T P P  PVS  YAK+ PP  DA+N  PNNS +IKSFGHKI
Sbjct: 1   MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKI 60

Query: 61  LSAAKSTNPKS-RSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGP 120
           LSA  S  P+S      K ESQ E  +ISG DVLRALQKAAAVKEKNRT+QVKE+KK   
Sbjct: 61  LSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAAVKEKNRTQQVKEKKK--- 120

Query: 121 PPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE 162
              EG+ +++  SEMN RVRPL+IK DWGLRLT+LEKRL E+SE
Sbjct: 121 KKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE 161

[Close]

BLAST of CmaCh17G005060 vs. ExPASy TrEMBL
Match: A0A1S3CAW4 (uncharacterized protein LOC103498786 OS=Cucumis melo OX=3656 GN=LOC103498786 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40
Identity = 106/164 (64.63%), Postives = 121/164 (73.78%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAA STSPSPS  RLP+ T P P  PVS  YAK+ PP  DA+N  PNNS +IKSFGHKI
Sbjct: 1   MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKI 60

Query: 61  LSAAKSTNPKS-RSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGP 120
           LSA  S  P+S      K ESQ E  +ISG DVLRALQKAAAVKEKNRT+QVKE+KK   
Sbjct: 61  LSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAAVKEKNRTQQVKEKKK--- 120

Query: 121 PPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE 162
              EG+ +++  SEMN RVRPL+IK DWGLRLT+LEKRL E+SE
Sbjct: 121 KKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE 161

[Close]

BLAST of CmaCh17G005060 vs. ExPASy TrEMBL
Match: A0A0A0KCJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107890 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.2e-38
Identity = 104/164 (63.41%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAA STSP PSC RL + T   PTPP+S   A +QP  TDA+N  PNNSSSIK FGHKI
Sbjct: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60

Query: 61  LSAAKSTNPKS-RSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGP 120
           LSA  S  PKS      K ES  E A+ISG DVLRALQKAAAVKEK RT+QVKE+KK   
Sbjct: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKK--- 120

Query: 121 PPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE 162
              EG+ +++  SEMN RVRPL+I  DWGLRLT+LEKRL EIS+
Sbjct: 121 -KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISD 160

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: XP_023006674.1 (uncharacterized protein LOC111499329 [Cucurbita maxima])

HSP 1 Score: 309.3 bits (791), Expect = 4.0e-80
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI
Sbjct: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60

Query: 61  LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP 120
           LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP
Sbjct: 61  LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP 120

Query: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 163
           PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET
Sbjct: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 162

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: XP_022959476.1 (uncharacterized protein LOC111460438 [Cucurbita moschata])

HSP 1 Score: 296.2 bits (757), Expect = 3.5e-76
Identity = 155/162 (95.68%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MW AFSTSPSPSCCRLPLPTRP PTPPVSAIYAKAQPP+TDADNATPNNS+SIKSFGHKI
Sbjct: 1   MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKI 60

Query: 61  LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP 120
           LSAA STNPKSRSPIRKQESQLETA+ISGLDVLRALQKAAAVKEKNRTRQ KEQKKDGPP
Sbjct: 61  LSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPP 120

Query: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 163
           PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET
Sbjct: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 162

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: XP_023547620.1 (uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.4 bits (742), Expect = 1.9e-74
Identity = 153/162 (94.44%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAAFSTSPSPSCCRLPLPTRP PTPPVSAIYAKAQPP+TDADNATPNNSSSIKSFGHKI
Sbjct: 1   MWAAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSSSIKSFGHKI 60

Query: 61  LSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPP 120
           LSAA STN KSRSPIRKQESQLETA+ISGLDVLRALQKAAAVKEKNR RQ +EQKKDGPP
Sbjct: 61  LSAANSTNSKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRIRQGREQKKDGPP 120

Query: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 163
           PTEGSGSDNSEMNRRVRPLRIKNDWGLRL ELEKRLQEISET
Sbjct: 121 PTEGSGSDNSEMNRRVRPLRIKNDWGLRLAELEKRLQEISET 162

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: KAG6575245.1 (hypothetical protein SDJN03_25884, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248.8 bits (634), Expect = 6.5e-62
Identity = 133/141 (94.33%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 22  PLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKILSAAKSTNPKSRSPIRKQESQ 81
           P PTPPVSAIYAKAQPP+TDADNATPNNS+SIKSFGHKILSAA STNPKSRSPIRKQESQ
Sbjct: 6   PPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQ 65

Query: 82  LETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPPPTEGSGSDNSEMNRRVRPLRI 141
           LETA+ISGLDVLRALQKAAAVKEKNRTRQ KEQKKDGPPPTEGSGSDNSE+ RRVRPLRI
Sbjct: 66  LETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEVIRRVRPLRI 125

Query: 142 KNDWGLRLTELEKRLQEISET 163
           KNDWGLRLTELEKRLQEISET
Sbjct: 126 KNDWGLRLTELEKRLQEISET 146

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: XP_038906928.1 (uncharacterized protein LOC120092795 [Benincasa hispida])

HSP 1 Score: 210.7 bits (535), Expect = 2.0e-50
Identity = 121/166 (72.89%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAA ST P+PSC RLP+ TRPLPTPPVSAIYA++QPP TDA N TPN+SSSIKSFGHKI
Sbjct: 1   MWAASSTLPTPSCHRLPIITRPLPTPPVSAIYAESQPPKTDAGNTTPNDSSSIKSFGHKI 60

Query: 61  LSAAKSTNPKSRSP-----IRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQK 120
           LSA  S NPKS +P       KQE+Q E A+ISG D+LRALQKAAAVKEKNRTRQVK +K
Sbjct: 61  LSAVNSPNPKSLNPKPNKTTPKQEAQPEAAQISGSDILRALQKAAAVKEKNRTRQVKGKK 120

Query: 121 KDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISE 162
           K+G P TEGS   +SEMN RVRPL+IK DWGLRL++LEKRLQE SE
Sbjct: 121 KEG-PTTEGS---HSEMNHRVRPLKIKGDWGLRLSQLEKRLQEFSE 162

[Close]

BLAST of CmaCh17G005060 vs. TAIR 10
Match: AT2G46735.1 (unknown protein; Has 14 Blast hits to 14 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 6.4e-07
Identity = 54/160 (33.75%), Postives = 74/160 (46.25%), Query Frame = 0


Query: 16  LPLPTRPLPTPPVSAIYAKAQPPDTDADN-------ATPNNSSSIKSFGHKILSAAKSTN 75
           +P+     PT   S  Y++  P + D  +            S S+   G +IL     +N
Sbjct: 9   MPVQFHMRPTVATSVAYSQPPPHNYDGIHRRFINVPTKSQTSESVGGLGQQILLRTVDSN 68

Query: 76  PKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPPPTEGSGS- 135
           P  R PI K+       +ISG DVL A+Q+A A  ++ RT   K++ K+     E S S 
Sbjct: 69  P--RKPIPKE------TEISGSDVLWAIQRATA--QRKRTNAGKKKTKNRLSGVELSSSA 128

Query: 136 -----DNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET 163
                DN      V PLRIK+DWG RL E EK L+E   T
Sbjct: 129 GEPTGDNGVDYSNVTPLRIKSDWGHRLEEFEKLLKEFQNT 158

The following BLAST results are available for this feature:

BLAST of CmaCh17G005060 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G005060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L2U1	2.0e-80	100.00	uncharacterized protein LOC111499329 OS=Cucurbita maxima OX=3661 GN=LOC111499329...	[more]
A0A6J1H4Y8	1.7e-76	95.68	uncharacterized protein LOC111460438 OS=Cucurbita moschata OX=3662 GN=LOC1114604...	[more]
A0A5D3DMB8	1.5e-40	64.63	Chaperone ClpB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00299...	[more]
A0A1S3CAW4	1.5e-40	64.63	uncharacterized protein LOC103498786 OS=Cucumis melo OX=3656 GN=LOC103498786 PE=...	[more]
A0A0A0KCJ8	3.2e-38	63.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107890 PE=4 SV=1	[more]

BLAST of CmaCh17G005060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006674.1	4.0e-80	100.00	uncharacterized protein LOC111499329 [Cucurbita maxima]	[more]
XP_022959476.1	3.5e-76	95.68	uncharacterized protein LOC111460438 [Cucurbita moschata]	[more]
XP_023547620.1	1.9e-74	94.44	uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo]	[more]
KAG6575245.1	6.5e-62	94.33	hypothetical protein SDJN03_25884, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038906928.1	2.0e-50	72.89	uncharacterized protein LOC120092795 [Benincasa hispida]	[more]

BLAST of CmaCh17G005060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46735.1	6.4e-07	33.75	unknown protein; Has 14 Blast hits to 14 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 142..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..56
None	No IPR available	PANTHER	PTHR37728	BNAA04G26730D PROTEIN	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005060.1	CmaCh17G005060.1	mRNA