
CmaCh17G004540 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATATGGCCTAAAATGACTGCTAAACTTAAGCCCCCACCACCACCGCCACCACCACCACCAACCACAATTAAGGTACGCTTGGTTTCTCACGCGCCGCCGTATCCTTGTGGATTCTTTTTAAATTTTTGACTGTGGTCGCCAAATGTGTGTATAAATCCCGAAGGGTCACGTGGCGCGTGGTTCTCATGCGCTGCCGTCTTGTGGGGGTGGGAGTGGTGGATGGTATTTGGTTTATGGTCCTCTTGGTGGTTTGACTGTGTAAGCAATTTAAATTGAATATCTTAGATATATTCATATTTTCATCATCAATAAAATCTACATTTTTTTTTTTTACATCAACATTTAAAAAATATATTTGTTCCCGAAAAAATAAATTTGGCTGAAAAAAGATTTATTTATAGAGAAAGAAAAAACTCTATCATAACTCGAGATTCTAGCCCATTGTCCCAATATTTACCAAAATTTCTTCAAGCACATGCACGTGTTATCTCGTCAAGTTCTATAGTATCGAGACGGTACGAGCACCATACCAACTTTATCGTCACAACTAGAATGGCATAGAGTTGTTGCAACACTTCTTTCTAAATCACTTTCTTCTTTTTCTCTTCAATTATTAGCATTTAATTTCATTTTTTTCTATAAATTTTTTTTTGAAAAAGACTCGAAAATATAAAAAATAGTTTTATATTTTTAGATGGCATTTGAGTTTACATGATTATATATCATAGACGTTTTAGAACAATGAAGCTACGAGAATAGGTTAAACCAAAATCATATGCTAGGTTACAGAAGTCTATGCCCATGTTTACGATTTTAATTTAAAGCAGTCATAGTTTTAGACCCTCGGTCGCGGGAGTAGAAAAGATCCTCACACATCATCCATTTATAATTTTTTAGAATTTTACTCTATAAATATTTACTTTTAAAAAATTAAGGTTATAAATCTTCCTTTATTTTTTTTTAATCCACTAACAAATAATTTTTTTTAAACATTTTAACCACAAAAATACTATAATAAATTTTGCATGAGAGGTTAAAGGAGAAGACTTGCGTTCTTTTACACATAAGTGCGCGTGGGTTCAAAACCCACCGTCTGCGGAAAGAAAATTGTGTTTTATTAATAATTTTGCATAAATTTTTTCGTATATTGTAGACATACTATGATGTGGTAGAAATATTAAATAGGGTCGTTACACACATTTTTAATGGTTTATCTCACACATTTAGTAGCACATGCCACCTTGTAGTGGATTCCTTCAATATATATTTTTTTTTGAGTGTTTTAATCAATTTTCATAATTTGGAGGCATTTCGACAAATTTGATACTAAAAAATAGCATTTATCTCAAATATTCAAAATTTAATAGGTTAAACAATCACGTTGGAGCAGATTTTTAACAGCTAAAACTCACTACTAGTAGATATTGTGTTATTTAGGTTTTTCTTTCCGAGCTTCTCCTCAAGATTTTAAAACACATGTACTAGAGAGAGGTTTACACACTTTTACCAAAACTGTTTCATTTTACTTTCCACCGGATGTGAAATCTCACAAAATCTATATAAAGTTCAGAAGCATTTTGTTTAATATTTAAAAATTATTTGGTAGTTAACCATACCTAAAAGGGAATGCTAATTAGACCCAAGCTAGAAGGATACCACCAGGCACCTGGTGCCTCGATTAATAGAACTTAGACCATAACCTTAGCCACCCATTTAGACTATTACGGCCCACAAGTGGACTTGATTAGCAAAACTTGGACCGTAACCTTGGCCAACCAGTCATGACAAAGAGAACTAGATCATAACCGGCGCGTGACTTTCACGCGCCGCCTATGAAAAGTGGTAGAAAATGAGAAAAAGGCAAAAATAGAAAACAAATCTCGAAGATCTAGGGAAAGTGGGACCAAGAATGAGCCATCCAAAGAGGATTTGAAGACAAAAGGCGGCGCGTGGATGTCACGTTGAACAACCCACTAAGCATATTAACAAATGAAACGCATCAATGCATGGGTTTTTTTTAGAAGCGAGGACATAGTGGTGGCTCTCTCTCTCTCTCTCATATACGATACCGTCAAATCTCCACGATCTCTCATTTTTCTTCAAAAACAGCTACACTCTCTCTCTCTAACTTTATCCCACCATTTTATCCCTCTCTTCTCCTCTGCCATTTCTTGTTTGGACTCAAAAACCTTTACCATTTTCTCTCTCTCTTCTATTTGTACTACGACTCCCCACAAAACTAAGCATAATTCTACTTGTTCTCTTCTTCTTCATCATCTCTCTCTCTCTCTCTCTCTCTCTCATCAATACCCATTTGTTCTTATCCTTTCTCATCAACAACGCACCTATGAAGGTCTCTTCTTTTTCTTATTTGATCTAAAAAACAATGCCCTTTTCTCTTTCTTTTATGTTTGTTACGAGAATCCAAGACGTGGGTATTAGAGATTGGATTCTCTCATGTTGGATTCCCACAAAAAAATCAAATCTTTACTTTCTTTTTTCAATTTTCGTGGATTCCGATGATGTTTTTCTCGTGGGTTTTTCATTTTTGTTGAAATAGATCGAATTAGATCTCTTAATTTTGGATTTGGGATTTGCAGAAGTTCATATTGAAGCTTGATTTACACGATGACAAGGCCAAACAAAAGGCTTTGAAGACCGTATCAACACTTTCAGGTTCTTTTTGTTCTATGTTTTTCTTTCCTATGATGTTTTTTTTTTTTTTTTTTTTTTGTTTTGTTTTTCCTTTGAAGTGAAGCTAATTCTTAATCTCATAGGATTGCTTAGAGACATAATTTCTTTGAAAATTAAATGTCTTTGTCAAGACAAATTCTGTTGGTTGTTTGTGTATGTTGATCGATTTTGATCCTCTAACTTACCCAAACCCCACCACCAAACCTAACCCACATGCCCTTTGGCTGCTTTTCACTTTTCATTAAAAAAGAATGATTAACAATTTTTTATCATTTATAAAAAAAAAAAAAAAAAAACCCATTTCAAAAATTTTCCATCCACAATATTCTTTGAACTTTAAATCAACCTTGATTTTGGTCTAATAAGGAATATTCTTCCTAGAGAAAAAGATGGCTCATCTAACACCCTCAATTATATGAAACGATCACGTAATCTTCGATTTTGATATCGTGTAAAACGATTATAGTTCAATCAGCTAAAAGTTTAAGCGTATAGATAAATATCTAGATATTTGTTTTCTATTACGACTTATCATAAGCATCATATTTGCTCTTTTAGTATAAATAAATATTTTGTATCCATTTATTGTTCTTTCTTAAATGATTATAAATTGGCAGGAATTGATTCAATTGCGATGGACATGAAGGAGAAGAAGCTGACAGTAATTGGGACAGTGGATCCAGTGAATGTAGTAAGCAAGCTGAGGAAGTATTGGCCAACAGACATAATCTCAGTAGGGCCAGCAGTGGAGCCAAAGAAGGAGGAGCCAAAGAAGGAGGAGCCCAAAAAAGAGGAACCAAAGAAAGAAGAAGAGGGTAAGAAGGAGGAGCCAAAGAAAGAAGGAGAGGCTAAAAAAGACGACGCGAAGAAAGACGAGCCGAAGAAGGAGGACGACAAGAAAGACGAGTCGAAGAAAGACGGTGAAAAGAAGGAGGACGAGAAGAAGAAAGAGCCACCGCCAGTCGCTGTGCCAGCACCAATGCCGATACCGATGCCAATGCCGATGCATATGCCGATGCCGATGCCGATGCCTATGTATATGCAGCAACCTGACCCAGTAATGGACATGGTCAAGGCTCATAGACCATATAACCCTCACTTGACCAGTCATTACCATGTCCACAGCATGGAAGAGAACCCAAATGCTTGTGTTATTTGTTGAGTATTACAATTTCTATGGTGCCTTAAGCCAAGGCATTTTGGAAGCCAAACCTACTACCCCTTTGAAGCTAAAGCTCTCTCTTGTAGATAAAAAAAAAA ATGATATGGCCTAAAATGACTGCTAAACTTAAGCCCCCACCACCACCGCCACCACCACCACCAACCACAATTAAGGGTCACGTGGCGCGTGGTTCTCATGCGCTGCCGTCTTGTGGGGGTGGGAGTGGTGGATGGTATTTGGTTTATGGTCCTCTTGGTGGTTTGACTGTCATAATTCTACTTGTTCTCTTCTTCTTCATCATCTCTCTCTCTCTCTCTCTCTCTCTCATCAATACCCATTTGTTCTTATCCTTTCTCATCAACAACGCACCTATGAAGAAGTTCATATTGAAGCTTGATTTACACGATGACAAGGCCAAACAAAAGGCTTTGAAGACCGTATCAACACTTTCAGGAATTGATTCAATTGCGATGGACATGAAGGAGAAGAAGCTGACAGTAATTGGGACAGTGGATCCAGTGAATGTAGTAAGCAAGCTGAGGAAGTATTGGCCAACAGACATAATCTCAGTAGGGCCAGCAGTGGAGCCAAAGAAGGAGGAGCCAAAGAAGGAGGAGCCCAAAAAAGAGGAACCAAAGAAAGAAGAAGAGGGTAAGAAGGAGGAGCCAAAGAAAGAAGGAGAGGCTAAAAAAGACGACGCGAAGAAAGACGAGCCGAAGAAGGAGGACGACAAGAAAGACGAGTCGAAGAAAGACGGTGAAAAGAAGGAGGACGAGAAGAAGAAAGAGCCACCGCCAGTCGCTGTGCCAGCACCAATGCCGATACCGATGCCAATGCCGATGCATATGCCGATGCCGATGCCGATGCCTATGTATATGCAGCAACCTGACCCAGTAATGGACATGGTCAAGGCTCATAGACCATATAACCCTCACTTGACCAGTCATTACCATGTCCACAGCATGGAAGAGAACCCAAATGCTTGTGTTATTTGTTGAGTATTACAATTTCTATGGTGCCTTAAGCCAAGGCATTTTGGAAGCCAAACCTACTACCCCTTTGAAGCTAAAGCTCTCTCTTGTAGATAAAAAAAAAA ATGATATGGCCTAAAATGACTGCTAAACTTAAGCCCCCACCACCACCGCCACCACCACCACCAACCACAATTAAGGGTCACGTGGCGCGTGGTTCTCATGCGCTGCCGTCTTGTGGGGGTGGGAGTGGTGGATGGTATTTGGTTTATGGTCCTCTTGGTGGTTTGACTGTCATAATTCTACTTGTTCTCTTCTTCTTCATCATCTCTCTCTCTCTCTCTCTCTCTCTCATCAATACCCATTTGTTCTTATCCTTTCTCATCAACAACGCACCTATGAAGAAGTTCATATTGAAGCTTGATTTACACGATGACAAGGCCAAACAAAAGGCTTTGAAGACCGTATCAACACTTTCAGGAATTGATTCAATTGCGATGGACATGAAGGAGAAGAAGCTGACAGTAATTGGGACAGTGGATCCAGTGAATGTAGTAAGCAAGCTGAGGAAGTATTGGCCAACAGACATAATCTCAGTAGGGCCAGCAGTGGAGCCAAAGAAGGAGGAGCCAAAGAAGGAGGAGCCCAAAAAAGAGGAACCAAAGAAAGAAGAAGAGGGTAAGAAGGAGGAGCCAAAGAAAGAAGGAGAGGCTAAAAAAGACGACGCGAAGAAAGACGAGCCGAAGAAGGAGGACGACAAGAAAGACGAGTCGAAGAAAGACGGTGAAAAGAAGGAGGACGAGAAGAAGAAAGAGCCACCGCCAGTCGCTGTGCCAGCACCAATGCCGATACCGATGCCAATGCCGATGCATATGCCGATGCCGATGCCGATGCCTATGTATATGCAGCAACCTGACCCAGTAATGGACATGGTCAAGGCTCATAGACCATATAACCCTCACTTGACCAGTCATTACCATGTCCACAGCATGGAAGAGAACCCAAATGCTTGTGTTATTTGTTGA MIWPKMTAKLKPPPPPPPPPPTTIKGHVARGSHALPSCGGGSGGWYLVYGPLGGLTVIILLVLFFFIISLSLSLSLINTHLFLSFLINNAPMKKFILKLDLHDDKAKQKALKTVSTLSGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYWPTDIISVGPAVEPKKEEPKKEEPKKEEPKKEEEGKKEEPKKEGEAKKDDAKKDEPKKEDDKKDESKKDGEKKEDEKKKEPPPVAVPAPMPIPMPMPMHMPMPMPMPMYMQQPDPVMDMVKAHRPYNPHLTSHYHVHSMEENPNACVIC Homology
BLAST of CmaCh17G004540 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.0e-45 Identity = 129/211 (61.14%), Postives = 151/211 (71.56%), Query Frame = 0
BLAST of CmaCh17G004540 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.2e-11 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of CmaCh17G004540 vs. ExPASy Swiss-Prot
Match: Q9LTE2 (Heavy metal-associated isoprenylated plant protein 13 OS=Arabidopsis thaliana OX=3702 GN=HIPP13 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.8e-08 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of CmaCh17G004540 vs. ExPASy TrEMBL
Match: A0A6J1L5J9 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111499316 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 4.9e-99 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of CmaCh17G004540 vs. ExPASy TrEMBL
Match: A0A6J1H3W2 (heavy metal-associated isoprenylated plant protein 39-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460263 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 4.7e-94 Identity = 203/210 (96.67%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of CmaCh17G004540 vs. ExPASy TrEMBL
Match: A0A6J1H5A2 (heavy metal-associated isoprenylated plant protein 39-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460263 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 1.2e-92 Identity = 203/211 (96.21%), Postives = 204/211 (96.68%), Query Frame = 0
BLAST of CmaCh17G004540 vs. ExPASy TrEMBL
Match: A0A6J1D1R0 (heavy metal-associated isoprenylated plant protein 39-like OS=Momordica charantia OX=3673 GN=LOC111016229 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 9.9e-76 Identity = 176/208 (84.62%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of CmaCh17G004540 vs. ExPASy TrEMBL
Match: A0A1S3C772 (FK506-binding protein 4-like OS=Cucumis melo OX=3656 GN=LOC103497688 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 7.1e-74 Identity = 174/209 (83.25%), Postives = 185/209 (88.52%), Query Frame = 0
BLAST of CmaCh17G004540 vs. NCBI nr
Match: XP_023006658.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita maxima]) HSP 1 Score: 370.9 bits (951), Expect = 1.0e-98 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of CmaCh17G004540 vs. NCBI nr
Match: KAG6575196.1 (Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 356.7 bits (914), Expect = 2.0e-94 Identity = 204/210 (97.14%), Postives = 205/210 (97.62%), Query Frame = 0
BLAST of CmaCh17G004540 vs. NCBI nr
Match: XP_023549122.1 (heavy metal-associated isoprenylated plant protein 39-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 355.1 bits (910), Expect = 5.7e-94 Identity = 203/210 (96.67%), Postives = 205/210 (97.62%), Query Frame = 0
BLAST of CmaCh17G004540 vs. NCBI nr
Match: XP_022959202.1 (heavy metal-associated isoprenylated plant protein 39-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 354.4 bits (908), Expect = 9.8e-94 Identity = 203/210 (96.67%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of CmaCh17G004540 vs. NCBI nr
Match: XP_023549121.1 (heavy metal-associated isoprenylated plant protein 39-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 350.5 bits (898), Expect = 1.4e-92 Identity = 203/211 (96.21%), Postives = 205/211 (97.16%), Query Frame = 0
BLAST of CmaCh17G004540 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 183.7 bits (465), Expect = 2.1e-46 Identity = 129/211 (61.14%), Postives = 151/211 (71.56%), Query Frame = 0
BLAST of CmaCh17G004540 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 183.7 bits (465), Expect = 2.1e-46 Identity = 129/211 (61.14%), Postives = 151/211 (71.56%), Query Frame = 0
BLAST of CmaCh17G004540 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family ) HSP 1 Score: 84.7 bits (208), Expect = 1.3e-16 Identity = 55/101 (54.46%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of CmaCh17G004540 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family ) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of CmaCh17G004540 vs. TAIR 10
Match: AT5G52750.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 60.5 bits (145), Expect = 2.7e-09 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|