CmaCh17G003640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G003640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	outer envelope pore protein 16-2, chloroplastic-like
Location	Cma_Chr17: 2023562 .. 2026191 (+)
RNA-Seq Expression	CmaCh17G003640
Synteny	CmaCh17G003640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATCGTTTCGTCTCACTGATTTTAGCATTCAAATCGACTGCAGATTTTGGAGTTCAATCTCTGATTTATAGAAGCAGAAACAAGAAATGGGAGGTAAATGCTTAGAGAACTGTGGCGGAGGCTTCTTGTACGACTTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGGTTCGTAAGCTTTCATGATCTTAATTTCTGTTAACTTCTGTGATATTCTTGATGTGATATTGTTTTGTGTTGGACCTCAATGTCAATGTGGTAACCTTAAGATGTCGATTGTTCGTTGTGCAGATAGGAGCATTGCAATCTGCATCTCGAGAGGCGTATATTACGGTTGCGGGAAGTAAGATCCGTTTCATTTAATATTAAAATCTGATCCTCGTGCTTTGATTTCACTCGACTTCTTTCTACATTTCAAATTTTCAACTCTTTGTTTTGATTTTGATTCATTTTCGTGTATCTATTCCTTTGCTTGATGTCACTCGTTTAGGAGACCTTTGAGGTTAAATTGGTTAACAAAAATTTGTAATTCTCGAAAGATTGTTATCGTCCGTACAGGTCTTGATTCGAATAGTGGAGCACCATCTGGATTATCCAATGGTAGAAACAAAAGGTTTACAGGTTTTACAGGTACCCGAATCTTCCTACGAACTCAGCTCTGTTTATCCACAAGCAAAGTCGTTCTTGAGTCCGCCTACTGTGTTTAATTTTGTTTTTCTTGCCTCGTGAAAGTACGAACTATGTTTTAAATTGAATTCTAATAACTATATTGTTATAAATCGATACCATTTGTTTAGATGTGCGTTATTTTGGGCAATATATGGGACATGGATTGCCAAATTATTGCTTAATACAGACTAAAACTGAACTGCCCCTTATTATGTTCCTGAATAATTTGTGTGAAGTCCAAGTTAATCTTGTCCTTCGAGATGCTTGAAGCTCATTTCTTCATATGATGTGCAGGTGGAACCAACAAAGAGTCTCTTGAAGCCATGGTGAGTGTTTGTAAAGGGTGATCAAGTTTTGAGTTTGTGATGAATTATTTACAGTGGTGGTCAATCAACATGTGATGATTTTTCATTTTATGGGTACATCAGGTGAAGAATGTGGGAAAGGAATCTATGCAATGGGGTCAGTATCCCTTCTCTGAATTCTTGAATACTGAACGTTAATGAATGTTAAATTGTACTATTCTGGCTTAATTTTCTTTCTTGCACATCTGGTTTATGTTACTTCACCAATTAGATGGATAATGGGTTGAGTGCCATTTTTTGCTTTTGTGTCTATTTACTTCACCAATTAGATGGATTATTCTCTTTGAGGTTGCTTGGCAGATTATTACTTCACCAATTGTATTTCACCCTAAAAAGGGTACATCCAGAGAAAAATTACCAAGCTTTTGGTTTGGTGGTGTGATTTCATAGCATATTTATGCTGTTTAATTTTATTTTATTGCTCTCAGCTTTTTTTCTTCTTTTTTTGGTTTGTAGGATTAGCTGCTGGTGTTTATTCTGGTCTCACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGGTAAGCCTTCCACCATTTACAAATAAATGTTCATTGTTTAGATCCAAGTATGGGGCGTGATTTAGAGCGGAGGCGGGCTAAAATTCTTCATGGGGAAGGTATGGCTTTGGCTATTCCTGAAGCCCGCCAATTAGCTAATCATAGACATATTTGAGTTAATGGTTCGATAGTGGATATAGCAAGTTATCGTTGCAAACCTCGAGACATTACAGCAAAGGATGAAAAAAAATTGAAAGCACTGGTTAGCTATGTTGATTCATGAACTTCAATTGAACATTCATTTAAAATGATGTGGTAGAAAGCAACCTGACCACTAGAGCTCTTAATTTTTTTGTGAGGGTTTTGATGTAACCGTACATGAATTTATCAAGGGCAGAGATTTAGGGTTAGTGTCAATCTATAAGTTTAAAGTAGACTTTAAGTATATGTTCGGTATAGAAATCAAAAAGGATCCAATTCAACCAAGTTTCAAATACAAACGTCAAATTTGATCAGAAGTGTATCACATTAGAAATAGTTCCTTCCTTCTCTACAAGGACACTCTAACCAAGCACCAAAGACCCACTTAGACGGTGCCCACTTAGACGTTTAGTTCTTCTGGTCTCATGTCTTGAAATCTTGATCCATTCTTTCATTCCATCCATTGCAGAAGAACAGTGCAGTTGCAGGTGCCATGACGGGCGTAGCTGTGGCGCTTACATCGGACAAGCCTTCTCACGAGCATATCGTACAATATGCCATCACTGGTGCTGCTGTATCGACCGCTTCAAATATTTTTGCTAGCATATTTTAGGTATGAGTGTGGTACCGGAGCCATTTGACAAATTGTGGGATGTTCATCCTTCATGTTCATTCCGTCTTTTATTATTAAGATGATTATGATGTTCATCTTTTGGACTTTTGGTTTAATGTTTAGTTCTTTTTATCCGCTCCTCGTTGGGATAGAAAATGGTAACCAATAAATCTGGAAATTTGTATGATTTTAACGAATAACTGATACCATTGGCCTTATTGGAAGGGTAAAATAGGCTTACTTTATCTTTACTTTTTG

mRNA sequence

CGATCGTTTCGTCTCACTGATTTTAGCATTCAAATCGACTGCAGATTTTGGAGTTCAATCTCTGATTTATAGAAGCAGAAACAAGAAATGGGAGGTAAATGCTTAGAGAACTGTGGCGGAGGCTTCTTGTACGACTTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGATAGGAGCATTGCAATCTGCATCTCGAGAGGCGTATATTACGGTTGCGGGAAGTCTTGATTCGAATAGTGGAGCACCATCTGGATTATCCAATGGTAGAAACAAAAGGTTTACAGGTTTTACAGGTGGAACCAACAAAGAGTCTCTTGAAGCCATGGTGAAGAATGTGGGAAAGGAATCTATGCAATGGGGATTAGCTGCTGGTGTTTATTCTGGTCTCACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGAAGAACAGTGCAGTTGCAGGTGCCATGACGGGCGTAGCTGTGGCGCTTACATCGGACAAGCCTTCTCACGAGCATATCGTACAATATGCCATCACTGGTGCTGCTGTATCGACCGCTTCAAATATTTTTGCTAGCATATTTTAGGTATGAGTGTGGTACCGGAGCCATTTGACAAATTGTGGGATGTTCATCCTTCATGTTCATTCCGTCTTTTATTATTAAGATGATTATGATGTTCATCTTTTGGACTTTTGGTTTAATGTTTAGTTCTTTTTATCCGCTCCTCGTTGGGATAGAAAATGGTAACCAATAAATCTGGAAATTTGTATGATTTTAACGAATAACTGATACCATTGGCCTTATTGGAAGGGTAAAATAGGCTTACTTTATCTTTACTTTTTG

Coding sequence (CDS)

ATGGGAGGTAAATGCTTAGAGAACTGTGGCGGAGGCTTCTTGTACGACTTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGATAGGAGCATTGCAATCTGCATCTCGAGAGGCGTATATTACGGTTGCGGGAAGTCTTGATTCGAATAGTGGAGCACCATCTGGATTATCCAATGGTAGAAACAAAAGGTTTACAGGTTTTACAGGTGGAACCAACAAAGAGTCTCTTGAAGCCATGGTGAAGAATGTGGGAAAGGAATCTATGCAATGGGGATTAGCTGCTGGTGTTTATTCTGGTCTCACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGAAGAACAGTGCAGTTGCAGGTGCCATGACGGGCGTAGCTGTGGCGCTTACATCGGACAAGCCTTCTCACGAGCATATCGTACAATATGCCATCACTGGTGCTGCTGTATCGACCGCTTCAAATATTTTTGCTAGCATATTTTAG

Protein sequence

MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF

Homology

[Close]

BLAST of CmaCh17G003640 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 98/159 (61.64%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 14  LYDFGHPLLNRVADSFVKAAGIGALQSASREAYITV---AGSLDSNSGAPSGLSNGRNKR 73
           L+D GHPLLNR+ADSFVKAAG+GALQ+ SREAY TV   AG   +N G PS ++  +  R
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 74  FTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEAR-GAHDWKNSAVAGAM 133
           F    G ++K SL+A+VKN GKES+QWGLAAG+YSG+TYG+ E R GAHDW+NSAVAGA+
Sbjct: 81  FPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGAL 140

Query: 134 TGVAVAL-TSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           TG A+A+ TS++ SHE +VQ A+TGAA+STA+N+ +S+F
Sbjct: 141 TGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

[Close]

BLAST of CmaCh17G003640 vs. ExPASy Swiss-Prot
Match: Q9ZV24 (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP161 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.3e-15
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 16  DFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSGLSNGRNKRFTGFT 75
           D G+P LN   D+F+K   +G  +S + + Y  +                          
Sbjct: 20  DMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAID------------------------K 79

Query: 76  GGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTGVAVA 135
           G  +K +LE  +K + KE + WG A GVY G  YG++  RG+ DWKN+ +AGA TG AV 
Sbjct: 80  GSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATG-AVL 139

Query: 136 LTSDKPSHEHIVQYAITGAAVSTAS 161
               K   + IV  AI G A++TAS
Sbjct: 140 SAVGKKGKDTIVIDAILGGALATAS 139

[Close]

BLAST of CmaCh17G003640 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14
Identity = 49/146 (33.56%), Postives = 70/146 (47.95%), Query Frame = 0


Query: 16  DFGHPLLNRVADSFVKAAGIGALQSASREAY-ITVAGSLDSNSGAPSGLSNGRNKRFTGF 75
           D G+P LN   D F+K   + A +S + + + I   GS+ SN                  
Sbjct: 20  DMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISSN------------------ 79

Query: 76  TGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTGVAV 135
                    E  +K + KE   WG  AGVY G+ YG++  RG  DWKN+   GA+TG  V
Sbjct: 80  -------DFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALV 139

Query: 136 ALTSDKPSHEHIVQYAITGAAVSTAS 161
           +  S+    + I   AITGAA++TA+
Sbjct: 140 SAASNN-KKDKIAVDAITGAAIATAA 139

[Close]

BLAST of CmaCh17G003640 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-04
Identity = 29/85 (34.12%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 55  SNSGAPSGLSNG-RNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKE 114
           + +G   GL  G R+ R  G +G         + K++G+   Q GL +GV++    GL+ 
Sbjct: 23  ATAGGLYGLCAGPRDARKIGLSG---VSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQR 82

Query: 115 ARGAHDWKNSAVAGAMTGVAVALTS 139
            RG +DW N+ V GA+ G AVA+++
Sbjct: 83  YRGKNDWVNALVGGAVAGAAVAIST 104

[Close]

BLAST of CmaCh17G003640 vs. ExPASy TrEMBL
Match: A0A6J1KXL1 (outer envelope pore protein 16-2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499121 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.1e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60
           MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP
Sbjct: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60

Query: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120
           SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW
Sbjct: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120

Query: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF
Sbjct: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 167

[Close]

BLAST of CmaCh17G003640 vs. ExPASy TrEMBL
Match: A0A6J1H4R7 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460473 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.7e-78
Identity = 153/167 (91.62%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60
           MGGKC EN GGGFLYDFGHPL+NRVADSFVKAAGIGALQS SREAY+TVAGSLD NSGA 
Sbjct: 1   MGGKCFENSGGGFLYDFGHPLVNRVADSFVKAAGIGALQSTSREAYVTVAGSLDLNSGAS 60

Query: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120
           S LSNGRNK FTG TG TNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW
Sbjct: 61  SELSNGRNKSFTGLTGATNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120

Query: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           KNSAVAGAMTGVAVALTS+KPSHEHIVQYAITGAAVSTA+NIFA IF
Sbjct: 121 KNSAVAGAMTGVAVALTSEKPSHEHIVQYAITGAAVSTAANIFAGIF 167

[Close]

BLAST of CmaCh17G003640 vs. ExPASy TrEMBL
Match: A0A6J1H663 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460473 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.1e-75
Identity = 151/167 (90.42%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60
           MGGKC EN GGGFLYDFGHPL+NRVADSFVKAAGIGALQS SREAY+TVAGSLD NSGA 
Sbjct: 1   MGGKCFENSGGGFLYDFGHPLVNRVADSFVKAAGIGALQSTSREAYVTVAGSLDLNSGAS 60

Query: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120
           S LSNGRNK    FTG TNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW
Sbjct: 61  SELSNGRNK---SFTGATNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120

Query: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           KNSAVAGAMTGVAVALTS+KPSHEHIVQYAITGAAVSTA+NIFA IF
Sbjct: 121 KNSAVAGAMTGVAVALTSEKPSHEHIVQYAITGAAVSTAANIFAGIF 164

[Close]

BLAST of CmaCh17G003640 vs. ExPASy TrEMBL
Match: A0A0A0KCC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G307410 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.4e-64
Identity = 131/158 (82.91%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 10  GGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSGLSNGRNK 69
           GG FLYD GHPLLNRVADSFVKAAGIGALQS SREAY TVAGS+DSN   P  LS+ R +
Sbjct: 69  GGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQ 128

Query: 70  RFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAM 129
           RF G  G TNKESLEAMVK+VGKES+QWGLAAGVYSGLTYGLKEARGAHDWKNSA+AGA+
Sbjct: 129 RFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAV 188

Query: 130 TGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           TGVAVALT+DK SHEHIVQYAITGAA+STA+NIFA IF
Sbjct: 189 TGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 226

[Close]

BLAST of CmaCh17G003640 vs. ExPASy TrEMBL
Match: A0A1S3C7N2 (outer envelope pore protein 16-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497794 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63
Identity = 131/157 (83.44%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 11  GGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSGLSNGRNKR 70
           G FLYD GHPLLNRVADSFVKAAGIGALQS SREAY TVAGS+DSNS  P  LS+ R +R
Sbjct: 21  GPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNSVPPPELSSIRKQR 80

Query: 71  FTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMT 130
           F G  G TNKESLEAMVK+VGKES+QWGLAAGVYSGLTYGLKEARGAHDWKNSA+AGA+T
Sbjct: 81  FPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVT 140

Query: 131 GVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           GVAVALTSD+ SHEHIVQYAITGAA+STA+NIFA IF
Sbjct: 141 GVAVALTSDESSHEHIVQYAITGAAMSTAANIFAGIF 177

[Close]

BLAST of CmaCh17G003640 vs. NCBI nr
Match: XP_023006371.1 (outer envelope pore protein 16-2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 329.3 bits (843), Expect = 1.9e-86
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60
           MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP
Sbjct: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60

Query: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120
           SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW
Sbjct: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120

Query: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF
Sbjct: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 167

[Close]

BLAST of CmaCh17G003640 vs. NCBI nr
Match: XP_023548561.1 (outer envelope pore protein 16-2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.8 bits (782), Expect = 2.2e-79
Identity = 156/167 (93.41%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60
           MGGKC EN GGGFLYDFGHPL+NRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP
Sbjct: 1   MGGKCFENSGGGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60

Query: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120
           S LS+ R K F GFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW
Sbjct: 61  SELSSSRKKSFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120

Query: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTA+NIFA IF
Sbjct: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 167

[Close]

BLAST of CmaCh17G003640 vs. NCBI nr
Match: KAG6575109.1 (Outer envelope pore protein 16-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013678.1 Outer envelope pore protein 16-2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.2 bits (770), Expect = 5.5e-78
Identity = 153/167 (91.62%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60
           MGGKC +N GGGFLYDFGHPL+NRVADSFVKAAGIGALQSASREAY+TVAGSLD NSGA 
Sbjct: 1   MGGKCFDNSGGGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYVTVAGSLDLNSGAS 60

Query: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120
           S LSNGRNK FTG TG TNKESLEAMVK+VGKESMQWGLAAGVYSGLTYGLKEARGAHDW
Sbjct: 61  SELSNGRNKSFTGLTGATNKESLEAMVKSVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120

Query: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTA+NIFA IF
Sbjct: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 167

[Close]

BLAST of CmaCh17G003640 vs. NCBI nr
Match: XP_022959516.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022959517.1 outer envelope pore protein 16-2, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 301.2 bits (770), Expect = 5.5e-78
Identity = 153/167 (91.62%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60
           MGGKC EN GGGFLYDFGHPL+NRVADSFVKAAGIGALQS SREAY+TVAGSLD NSGA 
Sbjct: 1   MGGKCFENSGGGFLYDFGHPLVNRVADSFVKAAGIGALQSTSREAYVTVAGSLDLNSGAS 60

Query: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120
           S LSNGRNK FTG TG TNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW
Sbjct: 61  SELSNGRNKSFTGLTGATNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120

Query: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           KNSAVAGAMTGVAVALTS+KPSHEHIVQYAITGAAVSTA+NIFA IF
Sbjct: 121 KNSAVAGAMTGVAVALTSEKPSHEHIVQYAITGAAVSTAANIFAGIF 167

[Close]

BLAST of CmaCh17G003640 vs. NCBI nr
Match: XP_022959518.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 151/167 (90.42%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   MGGKCLENCGGGFLYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAP 60
           MGGKC EN GGGFLYDFGHPL+NRVADSFVKAAGIGALQS SREAY+TVAGSLD NSGA 
Sbjct: 1   MGGKCFENSGGGFLYDFGHPLVNRVADSFVKAAGIGALQSTSREAYVTVAGSLDLNSGAS 60

Query: 61  SGLSNGRNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120
           S LSNGRNK    FTG TNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW
Sbjct: 61  SELSNGRNK---SFTGATNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDW 120

Query: 121 KNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           KNSAVAGAMTGVAVALTS+KPSHEHIVQYAITGAAVSTA+NIFA IF
Sbjct: 121 KNSAVAGAMTGVAVALTSEKPSHEHIVQYAITGAAVSTAANIFAGIF 164

[Close]

BLAST of CmaCh17G003640 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 191.0 bits (484), Expect = 7.5e-49
Identity = 98/157 (62.42%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 14  LYDFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNS-GAPSGLSNGRNKRFT 73
           L+D GHPLLNR+ADSFVKAAG+GALQ+ SREAY TV    DSN+ G PS ++  +  RF 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNVGPPSEITGNKKHRFP 80

Query: 74  GFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEAR-GAHDWKNSAVAGAMTG 133
              G ++K SL+A+VKN GKES+QWGLAAG+YSG+TYG+ E R GAHDW+NSAVAGA+TG
Sbjct: 81  NLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTG 140

Query: 134 VAVAL-TSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
            A+A+ TS++ SHE +VQ A+TGAA+STA+N+ +S+F
Sbjct: 141 AAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 176

[Close]

BLAST of CmaCh17G003640 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 187.6 bits (475), Expect = 8.3e-48
Identity = 98/159 (61.64%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 14  LYDFGHPLLNRVADSFVKAAGIGALQSASREAYITV---AGSLDSNSGAPSGLSNGRNKR 73
           L+D GHPLLNR+ADSFVKAAG+GALQ+ SREAY TV   AG   +N G PS ++  +  R
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 74  FTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEAR-GAHDWKNSAVAGAM 133
           F    G ++K SL+A+VKN GKES+QWGLAAG+YSG+TYG+ E R GAHDW+NSAVAGA+
Sbjct: 81  FPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGAL 140

Query: 134 TGVAVAL-TSDKPSHEHIVQYAITGAAVSTASNIFASIF 168
           TG A+A+ TS++ SHE +VQ A+TGAA+STA+N+ +S+F
Sbjct: 141 TGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

[Close]

BLAST of CmaCh17G003640 vs. TAIR 10
Match: AT2G28900.1 (outer plastid envelope protein 16-1 )

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-16
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 16  DFGHPLLNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSGLSNGRNKRFTGFT 75
           D G+P LN   D+F+K   +G  +S + + Y  +                          
Sbjct: 20  DMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAID------------------------K 79

Query: 76  GGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTGVAVA 135
           G  +K +LE  +K + KE + WG A GVY G  YG++  RG+ DWKN+ +AGA TG AV 
Sbjct: 80  GSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATG-AVL 139

Query: 136 LTSDKPSHEHIVQYAITGAAVSTAS 161
               K   + IV  AI G A++TAS
Sbjct: 140 SAVGKKGKDTIVIDAILGGALATAS 139

[Close]

BLAST of CmaCh17G003640 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.0e-05
Identity = 29/85 (34.12%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 55  SNSGAPSGLSNG-RNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKE 114
           + +G   GL  G R+ R  G +G         + K++G+   Q GL +GV++    GL+ 
Sbjct: 23  ATAGGLYGLCAGPRDARKIGLSG---VSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQR 82

Query: 115 ARGAHDWKNSAVAGAMTGVAVALTS 139
            RG +DW N+ V GA+ G AVA+++
Sbjct: 83  YRGKNDWVNALVGGAVAGAAVAIST 104

[Close]

BLAST of CmaCh17G003640 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.0e-05
Identity = 29/85 (34.12%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 55  SNSGAPSGLSNG-RNKRFTGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKE 114
           + +G   GL  G R+ R  G +G         + K++G+   Q GL +GV++    GL+ 
Sbjct: 23  ATAGGLYGLCAGPRDARKIGLSG---VSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQR 82

Query: 115 ARGAHDWKNSAVAGAMTGVAVALTS 139
            RG +DW N+ V GA+ G AVA+++
Sbjct: 83  YRGKNDWVNALVGGAVAGAAVAIST 104

The following BLAST results are available for this feature:

BLAST of CmaCh17G003640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WMZ5	1.2e-46	61.64	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZV24	5.3e-15	34.48	Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q41050	3.4e-14	33.56	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9LZH8	4.2e-04	34.12	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh17G003640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXL1	9.1e-87	100.00	outer envelope pore protein 16-2, chloroplastic-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1H4R7	2.7e-78	91.62	outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita mos...	[more]
A0A6J1H663	2.1e-75	90.42	outer envelope pore protein 16-2, chloroplastic-like isoform X2 OS=Cucurbita mos...	[more]
A0A0A0KCC7	6.4e-64	82.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G307410 PE=4 SV=1	[more]
A0A1S3C7N2	1.9e-63	83.44	outer envelope pore protein 16-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CmaCh17G003640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006371.1	1.9e-86	100.00	outer envelope pore protein 16-2, chloroplastic-like [Cucurbita maxima]	[more]
XP_023548561.1	2.2e-79	93.41	outer envelope pore protein 16-2, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
KAG6575109.1	5.5e-78	91.62	Outer envelope pore protein 16-2, chloroplastic, partial [Cucurbita argyrosperma...	[more]
XP_022959516.1	5.5e-78	91.62	outer envelope pore protein 16-2, chloroplastic-like isoform X1 [Cucurbita mosch...	[more]
XP_022959518.1	4.4e-75	90.42	outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita mosch...	[more]

BLAST of CmaCh17G003640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16160.1	7.5e-49	62.42	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	8.3e-48	61.64	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT2G28900.1	3.7e-16	34.48	outer plastid envelope protein 16-1	[more]
AT3G62880.1	3.0e-05	34.12	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	3.0e-05	34.12	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 22..157 e-value: 1.7E-13 score: 50.9
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 11..167
None	No IPR available	PANTHER	PTHR15371:SF1	OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC	coord: 11..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G003640.1	CmaCh17G003640.1	mRNA