CmaCh17G003610 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G003610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L29
Location	Cma_Chr17: 1999818 .. 2001658 (+)
RNA-Seq Expression	CmaCh17G003610
Synteny	CmaCh17G003610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCTCGATTTTAATGTAGAAGATGTACTTCATGGTAAAATAAATAAAATTTTGACAATTATGAATAATAAATATTCTAATTGCATTCGACTATTATATTCTCGAATAAAACTTGTATATATCGAAGTAATTTTTGTTTTAAACAAATATTTTTCAAGAACACGCGACTTCAAATTTGCAACAACGATGACATAGATAGATGAGGTTGAAGGAGATTGAAGGAGATGAAGGTCCTTGTCTACACAAAAAGCAAGGTGTGGAATGTTTTGGGAGTCTTAAGTTTCTCAATTTGTTCGGGTTGGATGTCTACACAAAAAGCATGGTGTAGAATGTTTTGGGAGTCTTAAGTTTCTCAATTTGTTCGGGTTGGATGTCTACACAAAAAGCAAGGTGTAGAATGTTTTGGGAGTCTTAAGTTTCTCAATTTGTTCGGGTTGGATGTCTACACAAAAAGCAAGGTGTGGAATGTTTTGAGAGTCTTAAGTTTCTCATTTTTTTCGGGTTGGAAGATTAAATGCTCACGAATCAATATATACTGATATATACACAAATATGTATACATGTTGTAGCGATAAATATTTACATAATATAATTTATTATGGGCACCCTTTTTATCAATTTTATACAATGTCTTGTGACCATTTTAGTTGTAGAGTTTACATATTATTGAAGAATCTCTTGATGTTTAAGCATTTTCATAAAATATAAACATTTTTTTGGACAATTTAATATTATTTCTTTGGGCCCATTTGGCCCAAAATCAGGCCCATTATAATTTGGAGGCAAGCCCAAGTTGAGCTGCCCATAACACTAAATTAGGGCAACACGATTAACAGTACGACGGAAGCCATAGCATTTGCCGCTACCACAGAGTAAGGTTTGTTCAAACTCTCTCCTTCTATCGATTTCTTGGCATATCAGTTTTCTGATTTCACCTTCTTTTTCGTTCAGAGATGGCGAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAGGAACGGCATCAAGAAGCCAAGGAAGCATCGTCACACTTCCACCAAAGGAGTATGAGATTTACTGATGGAATCATTTCTGTTCTTGTTCAATGGATTGTTTTGCTTTATTGAATGCTTCTGCAGAATAGTTTTAATTCGTTATCTCGTTGATCTGTGTTTAGATGGATCCGAAGTTCCTTAGAAACCAGAGGTACGCGAAGAAACACAACAATAAGAGCGGTGAAACCGGCAGTGAGGAAGAGTAAAGTAGAACGCCATGAAGCCGGCAAGTTTAGGGTTTTTATGATATAAGTTTGCTTCTATTGAATCTTTTGTTTTTGCTCTTCTTTTGTTCACTAGTCTTGTAATTCTGACCTGGTTGCAGCGAATTCCATTTCAATGTGGAAAGCGCTGCTTCTGATGCCTGATTGCGACAATTCATTATCAGATTTGCATTTCTAAGGCTGCATCTTCATACATAATCAATTTGTGCCATCGACATTATCTTCTTTCTGGGTTTAATGGTTTCTATTATCTTATGCTGTCAATCTTGCTGGAAAGCATTTGACTTATAGATTTAGATTACTGGGCCTCAATCCCTGCCTCTGTTCATTAAAAACCAGCTTCACAAATTTAGACATGAAGTCTCTTATGATTCAATGCTATTAGAGCTGTCTTTTGAGATGTTTTCTTGGGATATTCTTTTTCCAAGTTCATTTGCCTCGATTGTTCTCTTTTTTCTGTTTTTTCTCTTCTTTTTGTATGCTACATAACTTGGATTGAATGTTCTTGGCCTTCTTTGATTCTCATTCGAATCGAAATGTGAGATCATAGTTATGAACCGCCATCTTCG

mRNA sequence

ATGTGGCTCGATTTTAATGTAGAAGATGTACTTCATGAGATGGCGAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAGGAACGGCATCAAGAAGCCAAGGAAGCATCGTCACACTTCCACCAAAGGAATGGATCCGAAGTTCCTTAGAAACCAGAGGTACGCGAAGAAACACAACAATAAGAGCGGTGAAACCGGCAGTGAGGAAGAGTAAAGTAGAACGCCATGAAGCCGGCAAGTTTAGGGTTTTTATGATATAAGTTTGCTTCTATTGAATCTTTTGTTTTTGCTCTTCTTTTGTTCACTAGTCTTGTAATTCTGACCTGGTTGCAGCGAATTCCATTTCAATGTGGAAAGCGCTGCTTCTGATGCCTGATTGCGACAATTCATTATCAGATTTGCATTTCTAAGGCTGCATCTTCATACATAATCAATTTGTGCCATCGACATTATCTTCTTTCTGGGTTTAATGGTTTCTATTATCTTATGCTGTCAATCTTGCTGGAAAGCATTTGACTTATAGATTTAGATTACTGGGCCTCAATCCCTGCCTCTGTTCATTAAAAACCAGCTTCACAAATTTAGACATGAAGTCTCTTATGATTCAATGCTATTAGAGCTGTCTTTTGAGATGTTTTCTTGGGATATTCTTTTTCCAAGTTCATTTGCCTCGATTGTTCTCTTTTTTCTGTTTTTTCTCTTCTTTTTGTATGCTACATAACTTGGATTGAATGTTCTTGGCCTTCTTTGATTCTCATTCGAATCGAAATGTGAGATCATAGTTATGAACCGCCATCTTCG

Coding sequence (CDS)

ATGTGGCTCGATTTTAATGTAGAAGATGTACTTCATGAGATGGCGAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAGGAACGGCATCAAGAAGCCAAGGAAGCATCGTCACACTTCCACCAAAGGAATGGATCCGAAGTTCCTTAGAAACCAGAGGTACGCGAAGAAACACAACAATAAGAGCGGTGAAACCGGCAGTGAGGAAGAGTAA

Protein sequence

MWLDFNVEDVLHEMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEEE

Homology

[Close]

BLAST of CmaCh17G003610 vs. ExPASy Swiss-Prot
Match: Q9M7X7 (60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.3e-21
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE  S E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. ExPASy Swiss-Prot
Match: Q84WM0 (60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE    E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. ExPASy Swiss-Prot
Match: Q58DW3 (60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 82.0 bits (201), Expect = 3.0e-15
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 66
          MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of CmaCh17G003610 vs. ExPASy Swiss-Prot
Match: P47914 (60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 3.0e-15
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 66
          MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of CmaCh17G003610 vs. ExPASy Swiss-Prot
Match: Q8HXB8 (60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 82.0 bits (201), Expect = 3.0e-15
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 66
          MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of CmaCh17G003610 vs. ExPASy TrEMBL
Match: A0A6J1L4P4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. ExPASy TrEMBL
Match: A0A6J1H4N3 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. ExPASy TrEMBL
Match: A0A6J1KHA4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. ExPASy TrEMBL
Match: A0A6J1KET9 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. ExPASy TrEMBL
Match: A0A6J1L1Y3 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499113 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGETG+EE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. NCBI nr
Match: KAG7013674.1 (60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 13  EMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSE 72
           EMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSE
Sbjct: 57  EMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSE 116

Query: 73  EE 75
           EE
Sbjct: 117 EE 118

[Close]

BLAST of CmaCh17G003610 vs. NCBI nr
Match: XP_022959482.1 (60S ribosomal protein L29-1-like [Cucurbita moschata] >XP_022959483.1 60S ribosomal protein L29-1-like [Cucurbita moschata] >XP_023006357.1 60S ribosomal protein L29-1-like [Cucurbita maxima] >XP_023006358.1 60S ribosomal protein L29-1-like [Cucurbita maxima] >XP_023549485.1 60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.9 bits (302), Expect = 4.5e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. NCBI nr
Match: XP_023000055.1 (60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal protein L29-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-23
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. NCBI nr
Match: XP_023000056.1 (60S ribosomal protein L29-1-like [Cucurbita maxima] >KAG7026347.1 60S ribosomal protein L29-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118.2 bits (295), Expect = 2.9e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. NCBI nr
Match: XP_038875325.1 (60S ribosomal protein L29-1-like [Benincasa hispida])

HSP 1 Score: 117.5 bits (293), Expect = 5.0e-23
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. TAIR 10
Match: AT3G06680.1 (Ribosomal L29e protein family )

HSP 1 Score: 103.2 bits (256), Expect = 9.1e-23
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 10 VLHEMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET 69
          V+ EMAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE 
Sbjct: 19 VVTEMAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGEN 78

Query: 70 GSEEE 75
             EE
Sbjct: 79 AGVEE 83

[Close]

BLAST of CmaCh17G003610 vs. TAIR 10
Match: AT3G06700.1 (Ribosomal L29e protein family )

HSP 1 Score: 100.9 bits (250), Expect = 4.5e-22
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE  S E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. TAIR 10
Match: AT3G06700.2 (Ribosomal L29e protein family )

HSP 1 Score: 100.9 bits (250), Expect = 4.5e-22
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE  S E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. TAIR 10
Match: AT3G06700.3 (Ribosomal L29e protein family )

HSP 1 Score: 100.9 bits (250), Expect = 4.5e-22
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE  S E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003610 vs. TAIR 10
Match: AT3G06680.2 (Ribosomal L29e protein family )

HSP 1 Score: 100.1 bits (248), Expect = 7.7e-22
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 14 MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 73
          MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE    E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 74 E 75
          E
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of CmaCh17G003610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7X7	6.3e-21	81.97	60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1	[more]
Q84WM0	1.1e-20	81.97	60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2	[more]
Q58DW3	3.0e-15	78.85	60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3	[more]
P47914	3.0e-15	78.85	60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2	[more]
Q8HXB8	3.0e-15	78.85	60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3	[more]

BLAST of CmaCh17G003610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L4P4	2.2e-24	100.00	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1	[more]
A0A6J1H4N3	2.2e-24	100.00	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=...	[more]
A0A6J1KHA4	1.1e-23	98.36	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1	[more]
A0A6J1KET9	1.4e-23	96.72	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1	[more]
A0A6J1L1Y3	2.4e-23	96.72	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499113 PE=3 SV=1	[more]

BLAST of CmaCh17G003610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013674.1	1.2e-24	100.00	60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022959482.1	4.5e-24	100.00	60S ribosomal protein L29-1-like [Cucurbita moschata] >XP_022959483.1 60S riboso...	[more]
XP_023000055.1	2.2e-23	98.36	60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal pro...	[more]
XP_023000056.1	2.9e-23	96.72	60S ribosomal protein L29-1-like [Cucurbita maxima] >KAG7026347.1 60S ribosomal ...	[more]
XP_038875325.1	5.0e-23	96.72	60S ribosomal protein L29-1-like [Benincasa hispida]	[more]

BLAST of CmaCh17G003610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06680.1	9.1e-23	80.00	Ribosomal L29e protein family	[more]
AT3G06700.1	4.5e-22	81.97	Ribosomal L29e protein family	[more]
AT3G06700.2	4.5e-22	81.97	Ribosomal L29e protein family	[more]
AT3G06700.3	4.5e-22	81.97	Ribosomal L29e protein family	[more]
AT3G06680.2	7.7e-22	81.97	Ribosomal L29e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1730		coord: 14..74 e-value: 1.2E-30 score: 107.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..74
None	No IPR available	PANTHER	PTHR12884:SF30	60S RIBOSOMAL PROTEIN L29	coord: 14..74
IPR002673	Ribosomal protein L29e	PFAM	PF01779	Ribosomal_L29e	coord: 16..55 e-value: 5.9E-24 score: 84.1
IPR002673	Ribosomal protein L29e	PANTHER	PTHR12884	60S RIBOSOMAL PROTEIN L29	coord: 14..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G003610.1	CmaCh17G003610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome