CmaCh17G003600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G003600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L29
Location	Cma_Chr17: 1998709 .. 1999519 (+)
RNA-Seq Expression	CmaCh17G003600
Synteny	CmaCh17G003600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGGAAATCACTGCACGTTCGGCCACCGCTGAGTCTAGGGTTTGTTCAAATCCTCTCGTTTCGATCAAATTCTTCTGTAACGAAGACCGGCATAGCATCAGTTTCCTGATTTCACTCTCTTTTGTGTTTTTTTTGTTCAGAGATGGCGAAGTCGAAAAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAGGAACGGCATCAAGAAACCGAGGAAGCATCGCTACACTTCCACCAAAGGAGTATGAGAATTACTGATGGAATCATTTCTGTTCTTGTTCAATCGATTGTTTTTCCTTATAGAATTACTGATGGAATCATTTGTGTTCTTGTGCAATAGATGGATCCTAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAATAAGAGTGGTGAAACCGGTACTGAAGAAGAGTAAAATAGAACGCCATGCAGTTGAGTTTTTGGTTTGCTTCGATTGAACCTTTTTTATATTGTTATTTATTCTCTTTTTGGTTACCACCAGTGTAGTAACTTTCACTTTAATGTAGCGAGTCCTGTTTCTTTCAATGTTCGATTACCTGTTCTTCGTGTTTTCAAATTTTTAGTGATTGATTGTCTTCGTACTTGTTTGTGCTATTGGCCTTCTCTTCCACAACTATTTAGGCTTTTCTTAATTAGAATTATAAACACTATTTCTAGTTGATTTCTTTACTTTCTTTTATTTCCAAAAGAACGGAAGCCAAAGTTTTGAATACTAAGAATAATTTTGAAAATTTTGTTCTTGTTTTTTTTAGTTAAAGAATCAAAGATATTAGGTGA

mRNA sequence

CTCAGGAAATCACTGCACGTTCGGCCACCGCTGAGTCTAGGAGATGGCGAAGTCGAAAAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAGGAACGGCATCAAGAAACCGAGGAAGCATCGCTACACTTCCACCAAAGGAATGGATCCTAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAATAAGAGTGGTGAAACCGGTACTGAAGAAGAAATCAAAGATATTAGGTGA

Coding sequence (CDS)

ATGGCGAAGTCGAAAAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAGGAACGGCATCAAGAAACCGAGGAAGCATCGCTACACTTCCACCAAAGGAATGGATCCTAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAATAAGAGTGGTGAAACCGGTACTGAAGAAGAAATCAAAGATATTAGGTGA

Protein sequence

MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEEEIKDIR

Homology

[Close]

BLAST of CmaCh17G003600 vs. ExPASy Swiss-Prot
Match: Q9M7X7 (60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.7e-20
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQS KAH+NGIKKPR+HR+T T+GMDPKFLRNQRYA+KHN K+GE  + E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. ExPASy Swiss-Prot
Match: Q84WM0 (60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 4.8e-20
Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQS KAH+NGIKKPR+HR+T T+GMDPKFLRNQRYA+KHN KSGE    E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. ExPASy Swiss-Prot
Match: Q58DW3 (60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 7.2e-16
Identity = 42/52 (80.77%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK HRNGIKKPR  RY S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of CmaCh17G003600 vs. ExPASy Swiss-Prot
Match: P47914 (60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 7.2e-16
Identity = 42/52 (80.77%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK HRNGIKKPR  RY S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of CmaCh17G003600 vs. ExPASy Swiss-Prot
Match: Q8HXB8 (60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 7.2e-16
Identity = 42/52 (80.77%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK HRNGIKKPR  RY S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of CmaCh17G003600 vs. ExPASy TrEMBL
Match: A0A6J1L1Y3 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499113 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. ExPASy TrEMBL
Match: A0A6J1H6E4 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460443 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. ExPASy TrEMBL
Match: A0A6J1L4P4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGETG+EE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. ExPASy TrEMBL
Match: A0A6J1H4N3 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGETG+EE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. ExPASy TrEMBL
Match: A0A6J1KET9 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGE+GTEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. NCBI nr
Match: XP_022959485.1 (60S ribosomal protein L29-1-like [Cucurbita moschata] >XP_023006359.1 60S ribosomal protein L29-1-like [Cucurbita maxima] >XP_023549486.1 60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.7 bits (304), Expect = 2.4e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. NCBI nr
Match: XP_023000056.1 (60S ribosomal protein L29-1-like [Cucurbita maxima] >KAG7026347.1 60S ribosomal protein L29-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGE+GTEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. NCBI nr
Match: KAG7013674.1 (60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1   MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
           MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGETG+EE
Sbjct: 58  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 117

Query: 61  E 62
           E
Sbjct: 118 E 118

[Close]

BLAST of CmaCh17G003600 vs. NCBI nr
Match: XP_022959482.1 (60S ribosomal protein L29-1-like [Cucurbita moschata] >XP_022959483.1 60S ribosomal protein L29-1-like [Cucurbita moschata] >XP_023006357.1 60S ribosomal protein L29-1-like [Cucurbita maxima] >XP_023006358.1 60S ribosomal protein L29-1-like [Cucurbita maxima] >XP_023549485.1 60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGETG+EE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. NCBI nr
Match: XP_023514068.1 (60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 7.6e-23
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNK GE+GTEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKGGESGTEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. TAIR 10
Match: AT3G06700.1 (Ribosomal L29e protein family )

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-21
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQS KAH+NGIKKPR+HR+T T+GMDPKFLRNQRYA+KHN K+GE  + E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. TAIR 10
Match: AT3G06700.2 (Ribosomal L29e protein family )

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-21
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQS KAH+NGIKKPR+HR+T T+GMDPKFLRNQRYA+KHN K+GE  + E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. TAIR 10
Match: AT3G06700.3 (Ribosomal L29e protein family )

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-21
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQS KAH+NGIKKPR+HR+T T+GMDPKFLRNQRYA+KHN K+GE  + E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of CmaCh17G003600 vs. TAIR 10
Match: AT3G06680.1 (Ribosomal L29e protein family )

HSP 1 Score: 97.8 bits (242), Expect = 3.4e-21
Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQS KAH+NGIKKPR+HR+T T+GMDPKFLRNQRYA+KHN KSGE    E
Sbjct: 23 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 82

Query: 61 E 62
          E
Sbjct: 83 E 83

[Close]

BLAST of CmaCh17G003600 vs. TAIR 10
Match: AT3G06680.2 (Ribosomal L29e protein family )

HSP 1 Score: 97.8 bits (242), Expect = 3.4e-21
Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRYTSTKGMDPKFLRNQRYAKKHNNKSGETGTEE 60
          MAKSKNHTAHNQS KAH+NGIKKPR+HR+T T+GMDPKFLRNQRYA+KHN KSGE    E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of CmaCh17G003600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7X7	3.7e-20	78.69	60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1	[more]
Q84WM0	4.8e-20	80.33	60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2	[more]
Q58DW3	7.2e-16	80.77	60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3	[more]
P47914	7.2e-16	80.77	60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2	[more]
Q8HXB8	7.2e-16	80.77	60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3	[more]

BLAST of CmaCh17G003600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L1Y3	1.1e-24	100.00	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499113 PE=3 SV=1	[more]
A0A6J1H6E4	1.1e-24	100.00	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460443 PE=3 SV=...	[more]
A0A6J1L4P4	1.3e-23	96.72	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1	[more]
A0A6J1H4N3	1.3e-23	96.72	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=...	[more]
A0A6J1KET9	1.3e-23	96.72	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1	[more]

BLAST of CmaCh17G003600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959485.1	2.4e-24	100.00	60S ribosomal protein L29-1-like [Cucurbita moschata] >XP_023006359.1 60S riboso...	[more]
XP_023000056.1	2.6e-23	96.72	60S ribosomal protein L29-1-like [Cucurbita maxima] >KAG7026347.1 60S ribosomal ...	[more]
KAG7013674.1	2.6e-23	96.72	60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022959482.1	2.6e-23	96.72	60S ribosomal protein L29-1-like [Cucurbita moschata] >XP_022959483.1 60S riboso...	[more]
XP_023514068.1	7.6e-23	95.08	60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G003600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06700.1	2.6e-21	78.69	Ribosomal L29e protein family	[more]
AT3G06700.2	2.6e-21	78.69	Ribosomal L29e protein family	[more]
AT3G06700.3	2.6e-21	78.69	Ribosomal L29e protein family	[more]
AT3G06680.1	3.4e-21	80.33	Ribosomal L29e protein family	[more]
AT3G06680.2	3.4e-21	80.33	Ribosomal L29e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1730		coord: 1..64 e-value: 9.5E-32 score: 111.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..66
None	No IPR available	PANTHER	PTHR12884:SF30	60S RIBOSOMAL PROTEIN L29	coord: 1..61
IPR002673	Ribosomal protein L29e	PFAM	PF01779	Ribosomal_L29e	coord: 3..42 e-value: 2.6E-25 score: 88.4
IPR002673	Ribosomal protein L29e	PANTHER	PTHR12884	60S RIBOSOMAL PROTEIN L29	coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G003600.1	CmaCh17G003600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003735	structural constituent of ribosome