CmaCh17G002140 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G002140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Vitamin K-dependent protein S-like
Location	Cma_Chr17: 1103968 .. 1105948 (-)
RNA-Seq Expression	CmaCh17G002140
Synteny	CmaCh17G002140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATATCTCTGTTTTGTGATCGTTGGAGGGTTATGCCTTCCAGCGCTGTTCTTCCTCAATCTGCGATGGCTAATGATTTCGATGGCCCATTGTTCCTCTTCTCTCACCCATTTCCGGTTAGTTTTTCCCCTTTCTGGTATTTTCATGGCTGTTCTTTCTAGGGTTACTTAAGATTTTTCATTTCTTTTCTTGTACACCTTTTTATTCTGTGGCTTTTTCTGAAATGGATTGGTAACTTTTTTTGAGAACTTGATTGGAAAGGACAGAGTGTTTGTTCTTGTTTTGATTGAATTGATAATGGCTGAAAATGTCTGCAAGGAAGTGAACTATGGATGAGAAACCTGTAAAGATTCTAGTAATGGGAGTTTCTTGTTTGAATGTGATAGCAGTTCTGGGTGGAAGCAGGCTCTTTCTGATCATGATGATGGTGACTTTTCCAAGTTTCTCCCCTGCATTAGACCCAAATGTAAGATTCCTTTCTCTTTCTATATCTCCTACGAAGCTTTTCTGTGAAAAATAGCTGGGTTTTTAGCCATAGTTGCTATTTCATCTGCTTGCTGCAATCCATAGCTGTTTGATTCTGCCAAATGGGACTTGTTTTTGTTTGATGAATGTATTTGCCAAAAGTTACTGCAGAGGTGGCTGGTAAGATGTAGATTTAGGCCGTCACAATTGCATTTTCGCGATTGTGCGGCACTCACTCTATGGACTGAGTGAGTCAAGCCAACTTAGGATTGTGTCACCTATGGTCGGGCAATGTATGCTCAGGTCTTTGGCCCCATTTTGAGAAAACGGGCAGAGAGATTTTGAAAAAGAGTTTGAAAAGCAAAATTGAGTGAAAAATTGAAAACAATGTTACATGACTACCAGCAAAATATAATACCATGGCTTAAATAACATATAACTTTCTGGGTAGGGAGAATTTGACACCTAGTAGCATCCCCCTATATTACATTTTGAGGCAATTCAGGTCGGGTAGGCTTAGACGTGATTTTGCTTAACGGTCATACAAAATCTAGGTGGAAGGAGTTGATGACTGTCGCATTTCCCTGTAGTACATTTTAGGGTATTTCATGTCTACCAAGTGTAGATATGATTATGACGAAACGTCATTCACTTAGAAAAGACAAGAAGGAAATTATACTTCATGATAGGAAGCTAGAATTTTGGCATTCAACGAGCATGTGGCCATAGGCAACACACCTTGGACAAACATGACCGTGACACTGTGATTTCAGATTCATATTCATGTGAAAGAAAAAAGTACTAAATTTTTATGAATTCTAATGTTAGACTACCCATTTCAAAATTGGTATTACGTGATGGTCTGACAAGATTTTGGTTAAAGGCGACACATAAATTTAATGGTAAAGTTGGCCGAAGATATGAAACACATCAACAATGCTTATAGCTAAGGTTGCAGCTAAGAACAAAGATGTCTTCGAAACTCCATGTGCAGATGATAAAGGCCCTGTTGGATTTAACTTATTTGGATGAGTACATATTCATCATATTCAAGGTTCTATGGGTCTTGATCTTGATTATTATGATCATATATCTGATGGTACTAGAATTGAACATCTCACTGCTTTGAACAATGCTGATAGGCATTAGATTTTTACCGTTGATGCCACGTAATCTAACTTGCCCGGTACTTTTCGACCCCTCCATTGGGCGTACAGACCAAACTAAGAACTAATGAATCGATATTCGTTTGTAATGACCAATCCTATGTTTTTGGTGAATATGAAAGCTTATTTACTTGATGTCTTTCTTGTTGCTGTATAGCTTGTCGATGGGTCGACTGTGAAGGCGGTTCGTGCAACAAGACGTCGTGGTTGGCATACAAATGTGGTTGTTTGAAGGGCTAACACTGCCTTTCCATGCTTATTCTGAGTTGTGTTTGATACTCAATTTGAAGGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGGCTAG

mRNA sequence

ATGGCCATATCTCTGTTTTGTGATCGTTGGAGGGTTATGCCTTCCAGCGCTGTTCTTCCTCAATCTGCGATGGCTAATGATTTCGATGGCCCATTGTTCCTCTTCTCTCACCCATTTCCGGTTAGTTTTTCCCCTTTCTGTTCTGGGTGGAAGCAGGCTCTTTCTGATCATGATGATGGTGACTTTTCCAAGTTTCTCCCCTGCATTAGACCCAAATGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGGCTAG

Coding sequence (CDS)

ATGGCCATATCTCTGTTTTGTGATCGTTGGAGGGTTATGCCTTCCAGCGCTGTTCTTCCTCAATCTGCGATGGCTAATGATTTCGATGGCCCATTGTTCCTCTTCTCTCACCCATTTCCGGTTAGTTTTTCCCCTTTCTGTTCTGGGTGGAAGCAGGCTCTTTCTGATCATGATGATGGTGACTTTTCCAAGTTTCTCCCCTGCATTAGACCCAAATGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGGCTAG

Protein sequence

MAISLFCDRWRVMPSSAVLPQSAMANDFDGPLFLFSHPFPVSFSPFCSGWKQALSDHDDGDFSKFLPCIRPKCSMSMDSKDPSATNNNNG

Homology

[Close]

BLAST of CmaCh17G002140 vs. ExPASy TrEMBL
Match: A0A5D3E219 (Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001270 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 45/106 (42.45%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAV------LPQSAMANDFDGPLFLFSHPF--------------- 60
           MAISLFCDRWRVM S  V      + QSA A+DF+  L     P                
Sbjct: 1   MAISLFCDRWRVMASIVVALALLLVFQSAKADDFNDLLSPLLSPIFENVCKEVNCGKGTC 60

Query: 61  ------PVSFSPFC-SGWKQALSDHDDGDFS--KFLPCIRPKCSMS 77
                   SF   C SGWKQ L D DD D +  KFLPCI PKC+++
Sbjct: 61  KTSGNGSFSFECDCESGWKQTLFDDDDDDRNHFKFLPCIIPKCNLT 106

[Close]

BLAST of CmaCh17G002140 vs. ExPASy TrEMBL
Match: A0A5A7UQQ7 (Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003220 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 45/106 (42.45%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAV------LPQSAMANDFDGPLFLFSHPF--------------- 60
           MAISLFCDRWRVM S  V      + QSA A+DF+  L     P                
Sbjct: 1   MAISLFCDRWRVMASIVVALALLLVFQSAKADDFNDLLSPLLSPIFENVCKEVNCGKGTC 60

Query: 61  ------PVSFSPFC-SGWKQALSDHDDGDFS--KFLPCIRPKCSMS 77
                   SF   C SGWKQ L D DD D +  KFLPCI PKC+++
Sbjct: 61  KTSGNGSFSFECDCESGWKQTLFDDDDDDRNHFKFLPCIIPKCNLT 106

[Close]

BLAST of CmaCh17G002140 vs. ExPASy TrEMBL
Match: A0A1S3BLS9 (uncharacterized protein LOC103491235 OS=Cucumis melo OX=3656 GN=LOC103491235 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 45/106 (42.45%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAV------LPQSAMANDFDGPLFLFSHPF--------------- 60
           MAISLFCDRWRVM S  V      + QSA A+DF+  L     P                
Sbjct: 36  MAISLFCDRWRVMASIVVALALLLVFQSAKADDFNDLLSPLLSPIFENVCKEVNCGKGTC 95

Query: 61  ------PVSFSPFC-SGWKQALSDHDDGDFS--KFLPCIRPKCSMS 77
                   SF   C SGWKQ L D DD D +  KFLPCI PKC+++
Sbjct: 96  KTSGNGSFSFECDCESGWKQTLFDDDDDDRNHFKFLPCIIPKCNLT 141

[Close]

BLAST of CmaCh17G002140 vs. ExPASy TrEMBL
Match: A0A0A0LKT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G222120 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.3e-06
Identity = 45/108 (41.67%), Postives = 51/108 (47.22%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAV-LP-----QSAMANDFDGPLFLFSHPF--------------- 60
           MAISLFCDRWRVM S  + LP     QSA A+D +  L     P                
Sbjct: 1   MAISLFCDRWRVMASIVLALPLLLVFQSAKADDLNDLLSPLLSPIFENVCKEVNCGKGTC 60

Query: 61  ------PVSFSPFC-SGWKQALSDHDDGD----FSKFLPCIRPKCSMS 77
                   SF   C SGWKQ L D DD D      KFLPCI PKC+++
Sbjct: 61  KTSGNGSFSFECDCDSGWKQTLFDDDDTDDDSNHFKFLPCIIPKCNLT 108

[Close]

BLAST of CmaCh17G002140 vs. NCBI nr
Match: XP_038906891.1 (uncharacterized protein LOC120092768 [Benincasa hispida])

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-07
Identity = 46/104 (44.23%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAVLP-----QSAMANDFDGPLFLFSHPF---------------- 60
           MAISLF DRWR M S A L      QSA ANDF+  L     P                 
Sbjct: 1   MAISLFFDRWRAMASIAALSLLLIFQSAKANDFNDLLSPLLSPIFENVCKEVNCGKGTCK 60

Query: 61  -----PVSFSPFC-SGWKQALS-DHDDGDFSKFLPCIRPKCSMS 77
                  SF   C SGWKQ+LS D DDG   KFLPCI PKC+++
Sbjct: 61  ASGNGTFSFECDCDSGWKQSLSDDDDDGSHFKFLPCIIPKCNLT 104

[Close]

BLAST of CmaCh17G002140 vs. NCBI nr
Match: KAA0057444.1 (vitamin K-dependent protein S-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.0e-06
Identity = 45/106 (42.45%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAV------LPQSAMANDFDGPLFLFSHPF--------------- 60
           MAISLFCDRWRVM S  V      + QSA A+DF+  L     P                
Sbjct: 1   MAISLFCDRWRVMASIVVALALLLVFQSAKADDFNDLLSPLLSPIFENVCKEVNCGKGTC 60

Query: 61  ------PVSFSPFC-SGWKQALSDHDDGDFS--KFLPCIRPKCSMS 77
                   SF   C SGWKQ L D DD D +  KFLPCI PKC+++
Sbjct: 61  KTSGNGSFSFECDCESGWKQTLFDDDDDDRNHFKFLPCIIPKCNLT 106

[Close]

BLAST of CmaCh17G002140 vs. NCBI nr
Match: TYK30143.1 (vitamin K-dependent protein S-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.0e-06
Identity = 45/106 (42.45%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAV------LPQSAMANDFDGPLFLFSHPF--------------- 60
           MAISLFCDRWRVM S  V      + QSA A+DF+  L     P                
Sbjct: 1   MAISLFCDRWRVMASIVVALALLLVFQSAKADDFNDLLSPLLSPIFENVCKEVNCGKGTC 60

Query: 61  ------PVSFSPFC-SGWKQALSDHDDGDFS--KFLPCIRPKCSMS 77
                   SF   C SGWKQ L D DD D +  KFLPCI PKC+++
Sbjct: 61  KTSGNGSFSFECDCESGWKQTLFDDDDDDRNHFKFLPCIIPKCNLT 106

[Close]

BLAST of CmaCh17G002140 vs. NCBI nr
Match: XP_008449322.1 (PREDICTED: uncharacterized protein LOC103491235 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.0e-06
Identity = 45/106 (42.45%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAV------LPQSAMANDFDGPLFLFSHPF--------------- 60
           MAISLFCDRWRVM S  V      + QSA A+DF+  L     P                
Sbjct: 36  MAISLFCDRWRVMASIVVALALLLVFQSAKADDFNDLLSPLLSPIFENVCKEVNCGKGTC 95

Query: 61  ------PVSFSPFC-SGWKQALSDHDDGDFS--KFLPCIRPKCSMS 77
                   SF   C SGWKQ L D DD D +  KFLPCI PKC+++
Sbjct: 96  KTSGNGSFSFECDCESGWKQTLFDDDDDDRNHFKFLPCIIPKCNLT 141

[Close]

BLAST of CmaCh17G002140 vs. NCBI nr
Match: XP_004145389.1 (neurogenic locus notch homolog protein 1 [Cucumis sativus] >KGN61669.1 hypothetical protein Csa_006025 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-05
Identity = 45/108 (41.67%), Postives = 51/108 (47.22%), Query Frame = 0


Query: 1   MAISLFCDRWRVMPSSAV-LP-----QSAMANDFDGPLFLFSHPF--------------- 60
           MAISLFCDRWRVM S  + LP     QSA A+D +  L     P                
Sbjct: 1   MAISLFCDRWRVMASIVLALPLLLVFQSAKADDLNDLLSPLLSPIFENVCKEVNCGKGTC 60

Query: 61  ------PVSFSPFC-SGWKQALSDHDDGD----FSKFLPCIRPKCSMS 77
                   SF   C SGWKQ L D DD D      KFLPCI PKC+++
Sbjct: 61  KTSGNGSFSFECDCDSGWKQTLFDDDDTDDDSNHFKFLPCIIPKCNLT 108

The following BLAST results are available for this feature:

BLAST of CmaCh17G002140 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G002140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E219	5.0e-07	42.45	Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7UQQ7	5.0e-07	42.45	Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BLS9	5.0e-07	42.45	uncharacterized protein LOC103491235 OS=Cucumis melo OX=3656 GN=LOC103491235 PE=...	[more]
A0A0A0LKT4	7.3e-06	41.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G222120 PE=4 SV=1	[more]

BLAST of CmaCh17G002140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906891.1	2.7e-07	44.23	uncharacterized protein LOC120092768 [Benincasa hispida]	[more]
KAA0057444.1	1.0e-06	42.45	vitamin K-dependent protein S-like [Cucumis melo var. makuwa]	[more]
TYK30143.1	1.0e-06	42.45	vitamin K-dependent protein S-like [Cucumis melo var. makuwa]	[more]
XP_008449322.1	1.0e-06	42.45	PREDICTED: uncharacterized protein LOC103491235 [Cucumis melo]	[more]
XP_004145389.1	1.5e-05	41.67	neurogenic locus notch homolog protein 1 [Cucumis sativus] >KGN61669.1 hypotheti...	[more]

BLAST of CmaCh17G002140 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G002140.1	CmaCh17G002140.1	mRNA