CmaCh17G000780 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G000780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	agamous-like MADS-box protein AGL62
Location	Cma_Chr17: 384433 .. 385077 (-)
RNA-Seq Expression	CmaCh17G000780
Synteny	CmaCh17G000780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAACCAAAATTACAGAGAAAATCCATTCCGATGAAGAAAACTCTCGGCCGTCAAAAGATCGAAATCAAGAAGCTAGAGAAGAAGAGCAGCAAACAAGTGACGTTTTCGAAGCGCCGTGCCGGACTTTTCAAGAAGGCCGGCGAGCTTTCTGTGCTCTGCGGAGCAGAGGTTGCCATCATCGTCTTCTCTCCGAATGATAAGGTTTTTTGTTTCGGTCATCCGAATGTTGACGTGCTTTTGGATCGGTATCTGACCGGGAATTTGTCACCGCCGAAGCCGGCGGAGAGTTACGTTCCTGTAGCGGAGTTTAATCGCGATTTTGCCGATTTAGTATTGGAGTTCGAAGCGGAGAAGAAGCGAGCAGAGGAATTGATTCAGGCATCGGAGGAGTCAAGAAATAGCGGCGGATTTTGGTGGGAGGAGGCGGTGGAAGGGATGAGGTTGGAGGAATTGAAGGAGTTCCGATCGTCATTGATGGATTTGAGAGCTAAAGTGGCGGAGAAAGTCGAGAAATTGACGGCGGTTAGAATCGGAGGACCTCTGTTACCAGCGCTACCGCCACCGCCACCGCCGATGATGCCGCCGTCGTTTCACCTTGCCGGGAACCACCATGTCGCGACGGGATTAGGATTTTTTTAG

mRNA sequence

ATGGAGGAACCAAAATTACAGAGAAAATCCATTCCGATGAAGAAAACTCTCGGCCGTCAAAAGATCGAAATCAAGAAGCTAGAGAAGAAGAGCAGCAAACAAGTGACGTTTTCGAAGCGCCGTGCCGGACTTTTCAAGAAGGCCGGCGAGCTTTCTGTGCTCTGCGGAGCAGAGGTTGCCATCATCGTCTTCTCTCCGAATGATAAGGTTTTTTGTTTCGGTCATCCGAATGTTGACGTGCTTTTGGATCGGTATCTGACCGGGAATTTGTCACCGCCGAAGCCGGCGGAGAGTTACGTTCCTGTAGCGGAGTTTAATCGCGATTTTGCCGATTTAGTATTGGAGTTCGAAGCGGAGAAGAAGCGAGCAGAGGAATTGATTCAGGCATCGGAGGAGTCAAGAAATAGCGGCGGATTTTGGTGGGAGGAGGCGGTGGAAGGGATGAGGTTGGAGGAATTGAAGGAGTTCCGATCGTCATTGATGGATTTGAGAGCTAAAGTGGCGGAGAAAGTCGAGAAATTGACGGCGGTTAGAATCGGAGGACCTCTGTTACCAGCGCTACCGCCACCGCCACCGCCGATGATGCCGCCGTCGTTTCACCTTGCCGGGAACCACCATGTCGCGACGGGATTAGGATTTTTTTAG

Coding sequence (CDS)

ATGGAGGAACCAAAATTACAGAGAAAATCCATTCCGATGAAGAAAACTCTCGGCCGTCAAAAGATCGAAATCAAGAAGCTAGAGAAGAAGAGCAGCAAACAAGTGACGTTTTCGAAGCGCCGTGCCGGACTTTTCAAGAAGGCCGGCGAGCTTTCTGTGCTCTGCGGAGCAGAGGTTGCCATCATCGTCTTCTCTCCGAATGATAAGGTTTTTTGTTTCGGTCATCCGAATGTTGACGTGCTTTTGGATCGGTATCTGACCGGGAATTTGTCACCGCCGAAGCCGGCGGAGAGTTACGTTCCTGTAGCGGAGTTTAATCGCGATTTTGCCGATTTAGTATTGGAGTTCGAAGCGGAGAAGAAGCGAGCAGAGGAATTGATTCAGGCATCGGAGGAGTCAAGAAATAGCGGCGGATTTTGGTGGGAGGAGGCGGTGGAAGGGATGAGGTTGGAGGAATTGAAGGAGTTCCGATCGTCATTGATGGATTTGAGAGCTAAAGTGGCGGAGAAAGTCGAGAAATTGACGGCGGTTAGAATCGGAGGACCTCTGTTACCAGCGCTACCGCCACCGCCACCGCCGATGATGCCGCCGTCGTTTCACCTTGCCGGGAACCACCATGTCGCGACGGGATTAGGATTTTTTTAG

Protein sequence

MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPPPPPPMMPPSFHLAGNHHVATGLGFF

Homology

[Close]

BLAST of CmaCh17G000780 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.8e-31
Identity = 74/169 (43.79%), Postives = 108/169 (63.91%), Query Frame = 0


Query: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72
           +KK+ GRQKIE+ K++ +S+ QVTFSKRR+GLFKKA EL  LCGAEVAI+VFSP  KVF 
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 73  FGHPNVDVLLDRYLTGNLSPP--------KPAESYVPVAEFNRDFADLVLEFEAEKKRAE 132
           FGHPNVD ++DR++  N  PP        +       V + N     ++ + E EKK+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 133 ELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEK 174
           EL +  E+++  G  WWE+ VE + L +L+ F+ +L +L+  V  +  +
Sbjct: 122 ELKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

[Close]

BLAST of CmaCh17G000780 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73
           K+++GRQKI + K++K+S +QVTFSKRRAGLFKKA EL  LCGAE+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 74  GHPNVDVLLDRYLT-GNLSPPKPAE---SYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 133
           GHP+V+ +LDRY++  N+S  +  +   S     E N     ++ E E EKK+ + + + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 134 SEES-RNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVR--IGGPLLPA 193
            +ES R S   WWE+ VE M + +L+E + +L +LR  V   +      +  + G L   
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLDNK 238

Query: 194 LPPPPPPMMP 197
           +  PP   MP
Sbjct: 239 VTVPPYVNMP 248

[Close]

BLAST of CmaCh17G000780 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 73/167 (43.71%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72
           +KKTLGR+K+EI K+ K+S+ QVTFSKR+AGLFKKA E   LC A++A+IVFSP  KVF 
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 73  FGHPNVDVLLDRY---LTGNLSPPKPAESY--VPVAEFNRDFADLVLEFEAEKKRAEELI 132
           FGHPNVDVLLD +   + G+ +     ESY  + V   N+ + ++  E E E+K  +   
Sbjct: 62  FGHPNVDVLLDHFRGCVVGH-NNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRA 121

Query: 133 QASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKL 175
           Q   E+ N+   WW ++   + L +       L DL+  V EK  +L
Sbjct: 122 QNERENENAEE-WWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQL 166

[Close]

BLAST of CmaCh17G000780 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-23
Identity = 63/165 (38.18%), Postives = 99/165 (60.00%), Query Frame = 0


Query: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73
           +K LGR+KIE+ K+  +S+ QVTFSKRR+GLFKK  EL  LC AE+AIIVFSP+ K + F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 74  GHPNVDVLLD----RYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 133
           GHPNV+ LLD    R +  N +    + + + +   N    +++ E E E++  + ++Q 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 134 SEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKL 175
             E++++   WW  +   + L +    +  L  L+ +V EKV +L
Sbjct: 123 ERENKDAEK-WWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of CmaCh17G000780 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 59/165 (35.76%), Postives = 103/165 (62.42%), Query Frame = 0


Query: 17  LGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCFGHP 76
           +GR+KI+++ ++  +++QVTFSKRR GLFKKA EL+ LC AE+ I+VFSP  K F +G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 77  NVDVLLDRYL----TGNLSPPKPAESYVPVAEFNRDFADLV-LEFEAEKKRAEELIQASE 136
           N+D + +R++      +    + + +Y P  +   +  DL+  E EAEK+R E   ++ E
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGE---KSQE 120

Query: 137 ESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTA 177
           +  ++G   ++E++E + L+EL E++  L  +  ++  +V  L A
Sbjct: 121 KLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of CmaCh17G000780 vs. ExPASy TrEMBL
Match: A0A6J1KVC9 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.9e-113
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60
           MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA
Sbjct: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60

Query: 61  IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120
           IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK
Sbjct: 61  IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120

Query: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180
           KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG
Sbjct: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180

Query: 181 GPLLPALPPPPPPMMPPSFHLAGNHHVATGLGFF 215
           GPLLPALPPPPPPMMPPSFHLAGNHHVATGLGFF
Sbjct: 181 GPLLPALPPPPPPMMPPSFHLAGNHHVATGLGFF 214

[Close]

BLAST of CmaCh17G000780 vs. ExPASy TrEMBL
Match: A0A6J1H4M6 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111460353 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60
           MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA
Sbjct: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60

Query: 61  IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120
           IIVFSPNDKVFCFGHP+VDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK
Sbjct: 61  IIVFSPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120

Query: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180
           KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG
Sbjct: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180

Query: 181 GPLLPALPPPPP--PMMPPSFHLAGNHHVATGLGFF 215
           GPLLPALPPPPP  PM PPSFHLAGNHHVATGLGFF
Sbjct: 181 GPLLPALPPPPPTQPMTPPSFHLAGNHHVATGLGFF 216

[Close]

BLAST of CmaCh17G000780 vs. ExPASy TrEMBL
Match: A0A0A0LE01 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.6e-94
Identity = 182/220 (82.73%), Postives = 196/220 (89.09%), Query Frame = 0


Query: 10  SIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 69
           +IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK
Sbjct: 6   TIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 65

Query: 70  VFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 129
           +FCFGHP+VDVLLDRYLTGNLSPPKPAESY+PVAEFNRDFAD  LEFEAEKKRA ELI+A
Sbjct: 66  LFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRA 125

Query: 130 SEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPP 189
           +E+SR +GGFWW+EAVEG+RLEELK+FRS+LMDLRAKVAE+VEKLTAVRIGGPLLPALPP
Sbjct: 126 AEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP 185

Query: 190 PPPPMM---------------PPSFHLAGNHHVATGLGFF 215
           PP PM                P +FHLAGN  VATGLGFF
Sbjct: 186 PPQPMTSSSFHLIGNHQELPPPTAFHLAGNQRVATGLGFF 225

[Close]

BLAST of CmaCh17G000780 vs. ExPASy TrEMBL
Match: A0A1S3CRI8 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.9e-94
Identity = 184/227 (81.06%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 10  SIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 69
           +IPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK
Sbjct: 6   TIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDK 65

Query: 70  VFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 129
           VFCFGHP+VDVLLDRYLTGNLSPPKPAESY+PVAEFNRDFAD  LEFEAEKKRA ELI+A
Sbjct: 66  VFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRA 125

Query: 130 SEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPP 189
           +E+SR +GGFWW+EA EGMRLEELK+FRS+LMDLRAKVAE+VEKLTAVRIGGPLLPALPP
Sbjct: 126 AEDSRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP 185

Query: 190 PPPP--------------------MMPP--SFHLAGNHHVATGLGFF 215
           PP P                     +PP  +FHLAGNH VATGLGFF
Sbjct: 186 PPQPQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATGLGFF 232

[Close]

BLAST of CmaCh17G000780 vs. ExPASy TrEMBL
Match: A0A5D3D807 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001020 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.2e-92
Identity = 182/224 (81.25%), Postives = 194/224 (86.61%), Query Frame = 0


Query: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 73  FGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 132
           FGHP+VDVLLDRYLTGNLSPPKPAESY+PVAEFNRDFAD  LEFEAEKKRA ELI+A+E+
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

Query: 133 SRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPPPPP 192
           SR +GGFWW+EA EGMRLEELK+FRS+LMDLRAKVAE+VEKLTAVRIGGPLLPALPPPP 
Sbjct: 121 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

Query: 193 P--------------------MMPP--SFHLAGNHHVATGLGFF 215
           P                     +PP  +FHLAGNH VATGLGFF
Sbjct: 181 PQPQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHRVATGLGFF 224

[Close]

BLAST of CmaCh17G000780 vs. NCBI nr
Match: XP_023006252.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 418.3 bits (1074), Expect = 4.0e-113
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60
           MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA
Sbjct: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60

Query: 61  IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120
           IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK
Sbjct: 61  IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120

Query: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180
           KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG
Sbjct: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180

Query: 181 GPLLPALPPPPPPMMPPSFHLAGNHHVATGLGFF 215
           GPLLPALPPPPPPMMPPSFHLAGNHHVATGLGFF
Sbjct: 181 GPLLPALPPPPPPMMPPSFHLAGNHHVATGLGFF 214

[Close]

BLAST of CmaCh17G000780 vs. NCBI nr
Match: KAG6574839.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60
           MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA
Sbjct: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60

Query: 61  IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120
           IIVFSPNDKVFCFGHP+VDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK
Sbjct: 61  IIVFSPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120

Query: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180
           KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG
Sbjct: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180

Query: 181 GPLLPALPPPPP--PMMPPSFHLAGNHHVATGLGFF 215
           GPLLPALPPPPP  PM PPSFHLAGNHHVATGLGFF
Sbjct: 181 GPLLPALPPPPPPQPMTPPSFHLAGNHHVATGLGFF 216

[Close]

BLAST of CmaCh17G000780 vs. NCBI nr
Match: XP_022959356.1 (agamous-like MADS-box protein AGL62 [Cucurbita moschata])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60
           MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA
Sbjct: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60

Query: 61  IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120
           IIVFSPNDKVFCFGHP+VDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK
Sbjct: 61  IIVFSPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120

Query: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180
           KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG
Sbjct: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180

Query: 181 GPLLPALPPPPP--PMMPPSFHLAGNHHVATGLGFF 215
           GPLLPALPPPPP  PM PPSFHLAGNHHVATGLGFF
Sbjct: 181 GPLLPALPPPPPTQPMTPPSFHLAGNHHVATGLGFF 216

[Close]

BLAST of CmaCh17G000780 vs. NCBI nr
Match: KAG7013413.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407.9 bits (1047), Expect = 5.3e-110
Identity = 211/216 (97.69%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60
           MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA
Sbjct: 1   MEEPKLQRKSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVA 60

Query: 61  IIVFSPNDKVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120
           IIVFSPNDKVFCFGHP+VDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK
Sbjct: 61  IIVFSPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEK 120

Query: 121 KRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180
           KRAEELIQASEESRNSGGFWWEEAVEG+RLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG
Sbjct: 121 KRAEELIQASEESRNSGGFWWEEAVEGLRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIG 180

Query: 181 GPLLPALPPPPP--PMMPPSFHLAGNHHVATGLGFF 215
           GPLLPALPPPPP  PM PPSFHLAGNHHVATGLGFF
Sbjct: 181 GPLLPALPPPPPPQPMTPPSFHLAGNHHVATGLGFF 216

[Close]

BLAST of CmaCh17G000780 vs. NCBI nr
Match: XP_023549141.1 (agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 9.8e-104
Identity = 200/204 (98.04%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72
           MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 73  FGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 132
           FGHP+VDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 120

Query: 133 SRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPPPPP 192
           SRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPPPPP
Sbjct: 121 SRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPPPPP 180

Query: 193 --PMMPPSFHLAGNHHVATGLGFF 215
             PM PPSFHLAGNHHVATGLGFF
Sbjct: 181 PQPMTPPSFHLAGNHHVATGLGFF 204

[Close]

BLAST of CmaCh17G000780 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 135.2 bits (339), Expect = 6.2e-32
Identity = 74/169 (43.79%), Postives = 108/169 (63.91%), Query Frame = 0


Query: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72
           +KK+ GRQKIE+ K++ +S+ QVTFSKRR+GLFKKA EL  LCGAEVAI+VFSP  KVF 
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 73  FGHPNVDVLLDRYLTGNLSPP--------KPAESYVPVAEFNRDFADLVLEFEAEKKRAE 132
           FGHPNVD ++DR++  N  PP        +       V + N     ++ + E EKK+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 133 ELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEK 174
           EL +  E+++  G  WWE+ VE + L +L+ F+ +L +L+  V  +  +
Sbjct: 122 ELKKIREKTKALGN-WWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

[Close]

BLAST of CmaCh17G000780 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73
           K+++GRQKI + K++K+S +QVTFSKRRAGLFKKA EL  LCGAE+ IIVFSP  K F F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 74  GHPNVDVLLDRYLT-GNLSPPKPAE---SYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 133
           GHP+V+ +LDRY++  N+S  +  +   S     E N     ++ E E EKK+ + + + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 134 SEES-RNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVR--IGGPLLPA 193
            +ES R S   WWE+ VE M + +L+E + +L +LR  V   +      +  + G L   
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLDNK 238

Query: 194 LPPPPPPMMP 197
           +  PP   MP
Sbjct: 239 VTVPPYVNMP 248

[Close]

BLAST of CmaCh17G000780 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 114.8 bits (286), Expect = 8.7e-26
Identity = 73/167 (43.71%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72
           +KKTLGR+K+EI K+ K+S+ QVTFSKR+AGLFKKA E   LC A++A+IVFSP  KVF 
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 73  FGHPNVDVLLDRY---LTGNLSPPKPAESY--VPVAEFNRDFADLVLEFEAEKKRAEELI 132
           FGHPNVDVLLD +   + G+ +     ESY  + V   N+ + ++  E E E+K  +   
Sbjct: 62  FGHPNVDVLLDHFRGCVVGH-NNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRA 121

Query: 133 QASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKL 175
           Q   E+ N+   WW ++   + L +       L DL+  V EK  +L
Sbjct: 122 QNERENENAEE-WWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQL 166

[Close]

BLAST of CmaCh17G000780 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-24
Identity = 63/165 (38.18%), Postives = 99/165 (60.00%), Query Frame = 0


Query: 14  KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73
           +K LGR+KIE+ K+  +S+ QVTFSKRR+GLFKK  EL  LC AE+AIIVFSP+ K + F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 74  GHPNVDVLLD----RYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQA 133
           GHPNV+ LLD    R +  N +    + + + +   N    +++ E E E++  + ++Q 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 134 SEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKL 175
             E++++   WW  +   + L +    +  L  L+ +V EKV +L
Sbjct: 123 ERENKDAEK-WWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of CmaCh17G000780 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-24
Identity = 65/181 (35.91%), Postives = 103/181 (56.91%), Query Frame = 0


Query: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72
           ++ T GRQKIE+KK+E +S+ QVTFSKRR GLFKKA EL  L GAE+ +IVFSP  KVF 
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 73  FGHPNVDVLLDRYLTGN--------------LSPPKPAESYVPVAEFNRDFADLVLEFEA 132
           FGHP+V  L+ R+   N              L   +P  +     ++  +    VL  + 
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRN----IQYLNNILTEVLANQE 121

Query: 133 EKKRAEELIQASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVR 180
           ++K+   ++   +ESR   G W+E+ V+ + + E  +  S+L D++ K+  ++ + + V 
Sbjct: 122 KEKQKRMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVN 178

The following BLAST results are available for this feature:

BLAST of CmaCh17G000780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	8.8e-31	43.79	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	2.6e-27	42.11	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O80807	1.2e-24	43.71	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9LMM8	3.9e-23	38.18	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O64703	1.1e-20	35.76	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of CmaCh17G000780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KVC9	1.9e-113	100.00	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 ...	[more]
A0A6J1H4M6	1.2e-110	98.15	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11146035...	[more]
A0A0A0LE01	7.6e-94	82.73	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE...	[more]
A0A1S3CRI8	9.9e-94	81.06	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4...	[more]
A0A5D3D807	3.2e-92	81.25	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CmaCh17G000780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006252.1	4.0e-113	100.00	agamous-like MADS-box protein AGL62 [Cucurbita maxima]	[more]
KAG6574839.1	2.4e-110	98.15	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022959356.1	2.4e-110	98.15	agamous-like MADS-box protein AGL62 [Cucurbita moschata]	[more]
KAG7013413.1	5.3e-110	97.69	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_023549141.1	9.8e-104	98.04	agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G000780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	6.2e-32	43.79	AGAMOUS-like 62	[more]
AT2G24840.1	1.9e-28	42.11	AGAMOUS-like 61	[more]
AT1G65360.1	8.7e-26	43.71	AGAMOUS-like 23	[more]
AT1G01530.1	2.8e-24	38.18	AGAMOUS-like 28	[more]
AT4G36590.1	8.2e-24	35.91	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	PANTHER	PTHR11945:SF665	AGAMOUS-LIKE MADS-BOX PROTEIN AGL62	coord: 15..174
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 15..174
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 54..75 score: 44.01 coord: 39..54 score: 77.25 coord: 19..39 score: 51.12
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 17..76 e-value: 2.7E-33 score: 126.6
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 27..73 e-value: 9.5E-24 score: 82.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 19..73
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 17..77 score: 27.05302
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 29..94 e-value: 7.0E-27 score: 95.1
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 18..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G000780.1	CmaCh17G000780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity