Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGGACTACAGCGGCGAAGGCGACGGTGAGGTCTCGGCGGTAGTGACGGAGCAGCAGCAGCAACCAAACGCCGATGAAACTTATCTCACCACTTACCATCTCGCCGCAACGCCTTCCGGTCTGACTCAGGACGAGTTCGACGAGTTGAGGGACTTAGTAGCGGAGTTCCACATGTACAAACTCAGCCGCGGCCGGTGCTCCTCCTTACTGGCGCAGCGCGTGCAGGCGCCACCGGATACCGTGTGGTCCATCGTACGGCGGTTCGACAAGCCGCAGAGTTACAAGCACTTCATCAAGAGTTGTACGGTGAGCGAAGGATTCACAATGAAGCTAGGTTGTACGAGAGAGGTTAATGTAATCTCAGGCCTACCAGCGGATACTAGTAAGGAGAGACTCGATATTCACGACGACGAGCGGCGCGTCATCGGATTCAGCATCATCGGCGGTGAGCACCGCCTCCGGAATTACCGTTCGGTGACTTCGGTGCATCAGTTGGAGCGGGACGGCAAGATCTGGAGCGTGGTTTTGGAATCGTACGCAGTGGATGTTCCGCCGGGGAATACGGAGGAGGATGCTCGTTTGTTCGCCGATACGGTTGTGAAACTGAATCTACAGAAATTGGCGTCCGTCGCCGAAGTGATGAATCGTGGAGATAATCGGTAA
mRNA sequence
ATGGAAAAGGACTACAGCGGCGAAGGCGACGGTGAGGTCTCGGCGGTAGTGACGGAGCAGCAGCAGCAACCAAACGCCGATGAAACTTATCTCACCACTTACCATCTCGCCGCAACGCCTTCCGGTCTGACTCAGGACGAGTTCGACGAGTTGAGGGACTTAGTAGCGGAGTTCCACATGTACAAACTCAGCCGCGGCCGGTGCTCCTCCTTACTGGCGCAGCGCGTGCAGGCGCCACCGGATACCGTGTGGTCCATCGTACGGCGGTTCGACAAGCCGCAGAGTTACAAGCACTTCATCAAGAGTTGTACGGTGAGCGAAGGATTCACAATGAAGCTAGGTTGTACGAGAGAGGTTAATGTAATCTCAGGCCTACCAGCGGATACTAGTAAGGAGAGACTCGATATTCACGACGACGAGCGGCGCGTCATCGGATTCAGCATCATCGGCGGTGAGCACCGCCTCCGGAATTACCGTTCGGTGACTTCGGTGCATCAGTTGGAGCGGGACGGCAAGATCTGGAGCGTGGTTTTGGAATCGTACGCAGTGGATGTTCCGCCGGGGAATACGGAGGAGGATGCTCGTTTGTTCGCCGATACGGTTGTGAAACTGAATCTACAGAAATTGGCGTCCGTCGCCGAAGTGATGAATCGTGGAGATAATCGGTAA
Coding sequence (CDS)
ATGGAAAAGGACTACAGCGGCGAAGGCGACGGTGAGGTCTCGGCGGTAGTGACGGAGCAGCAGCAGCAACCAAACGCCGATGAAACTTATCTCACCACTTACCATCTCGCCGCAACGCCTTCCGGTCTGACTCAGGACGAGTTCGACGAGTTGAGGGACTTAGTAGCGGAGTTCCACATGTACAAACTCAGCCGCGGCCGGTGCTCCTCCTTACTGGCGCAGCGCGTGCAGGCGCCACCGGATACCGTGTGGTCCATCGTACGGCGGTTCGACAAGCCGCAGAGTTACAAGCACTTCATCAAGAGTTGTACGGTGAGCGAAGGATTCACAATGAAGCTAGGTTGTACGAGAGAGGTTAATGTAATCTCAGGCCTACCAGCGGATACTAGTAAGGAGAGACTCGATATTCACGACGACGAGCGGCGCGTCATCGGATTCAGCATCATCGGCGGTGAGCACCGCCTCCGGAATTACCGTTCGGTGACTTCGGTGCATCAGTTGGAGCGGGACGGCAAGATCTGGAGCGTGGTTTTGGAATCGTACGCAGTGGATGTTCCGCCGGGGAATACGGAGGAGGATGCTCGTTTGTTCGCCGATACGGTTGTGAAACTGAATCTACAGAAATTGGCGTCCGTCGCCGAAGTGATGAATCGTGGAGATAATCGGTAA
Protein sequence
MEKDYSGEGDGEVSAVVTEQQQQPNADETYLTTYHLAATPSGLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFDKPQSYKHFIKSCTVSEGFTMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFSIIGGEHRLRNYRSVTSVHQLERDGKIWSVVLESYAVDVPPGNTEEDARLFADTVVKLNLQKLASVAEVMNRGDNR
Homology
BLAST of CmaCh16G011540 vs. ExPASy Swiss-Prot
Match:
Q8VZS8 (Abscisic acid receptor PYL1 OS=Arabidopsis thaliana OX=3702 GN=PYL1 PE=1 SV=1)
HSP 1 Score: 289.3 bits (739), Expect = 3.8e-77
Identity = 134/194 (69.07%), Postives = 162/194 (83.51%), Query Frame = 0
Query: 31 LTTYHLAATPSGLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRF 90
++T H PS LTQDEF +L +AEFH Y+L GRCSSLLAQR+ APP+TVWS+VRRF
Sbjct: 20 ISTLHHQTMPSDLTQDEFTQLSQSIAEFHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRF 79
Query: 91 DKPQSYKHFIKSCTVSEGFTMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFSIIG 150
D+PQ YKHFIKSC VSE F M++GCTR+VNVISGLPA+TS+ERLD+ DD+RRV GFSI G
Sbjct: 80 DRPQIYKHFIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSITG 139
Query: 151 GEHRLRNYRSVTSVHQLER---DGKIWSVVLESYAVDVPPGNTEEDARLFADTVVKLNLQ 210
GEHRLRNY+SVT+VH+ E+ + +IW+VVLESY VDVP GN+EED RLFADTV++LNLQ
Sbjct: 140 GEHRLRNYKSVTTVHRFEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQ 199
Query: 211 KLASVAEVMNRGDN 222
KLAS+ E MNR +N
Sbjct: 200 KLASITEAMNRNNN 213
BLAST of CmaCh16G011540 vs. ExPASy Swiss-Prot
Match:
O49686 (Abscisic acid receptor PYR1 OS=Arabidopsis thaliana OX=3702 GN=PYR1 PE=1 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 1.8e-71
Identity = 128/183 (69.95%), Postives = 154/183 (84.15%), Query Frame = 0
Query: 40 PSGLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFDKPQSYKHF 99
PS LT +E EL++ +AEFH Y+L G CSSL AQR+ APP+ VWSIVRRFDKPQ+YKHF
Sbjct: 2 PSELTPEERSELKNSIAEFHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHF 61
Query: 100 IKSCTVSEGFTMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFSIIGGEHRLRNYR 159
IKSC+V + F M++GCTR+V VISGLPA+TS ERLDI DDERRV GFSIIGGEHRL NY+
Sbjct: 62 IKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYK 121
Query: 160 SVTSVHQLERDGKIWSVVLESYAVDVPPGNTEEDARLFADTVVKLNLQKLASVAEVM--N 219
SVT+VH+ E++ +IW+VVLESY VD+P GN+E+D R+FADTVVKLNLQKLA+VAE M N
Sbjct: 122 SVTTVHRFEKENRIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEAMARN 181
Query: 220 RGD 221
GD
Sbjct: 182 SGD 184
BLAST of CmaCh16G011540 vs. ExPASy Swiss-Prot
Match:
Q7XBY6 (Abscisic acid receptor PYL10 OS=Oryza sativa subsp. japonica OX=39947 GN=PYL10 PE=1 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 1.2e-54
Identity = 108/180 (60.00%), Postives = 133/180 (73.89%), Query Frame = 0
Query: 42 GLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFDKPQSYKHFIK 101
GLT +E+ ++R V H Y + G+CSSLLAQR+ APP VW++VRRFD PQ YKHFI+
Sbjct: 15 GLTAEEYAQVRATVEAHHRYAVGPGQCSSLLAQRIHAPPAAVWAVVRRFDCPQVYKHFIR 74
Query: 102 SCTV-------SEGFTMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFSIIGGEHR 161
SC + G ++ G REV+VISGLPA TS ERLD+ DD RV GF+I GGEHR
Sbjct: 75 SCVLRPDPHHDDNGNDLRPGRLREVSVISGLPASTSTERLDLLDDAHRVFGFTITGGEHR 134
Query: 162 LRNYRSVTSVHQLERDGKIWSVVLESYAVDVPPGNTEEDARLFADTVVKLNLQKLASVAE 215
LRNYRSVT+V QL+ +I ++VLESY VDVP GNTE+D RLFADTV++LNLQKL SV+E
Sbjct: 135 LRNYRSVTTVSQLD---EICTLVLESYIVDVPDGNTEDDTRLFADTVIRLNLQKLKSVSE 191
BLAST of CmaCh16G011540 vs. ExPASy Swiss-Prot
Match:
Q9SSM7 (Abscisic acid receptor PYL3 OS=Arabidopsis thaliana OX=3702 GN=PYL3 PE=1 SV=1)
HSP 1 Score: 200.3 bits (508), Expect = 2.3e-50
Identity = 101/191 (52.88%), Postives = 132/191 (69.11%), Query Frame = 0
Query: 32 TTYHLAATPSGLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFD 91
TT ++TP GLT+DEF L ++ H + S C+SL+A RV AP +W VR F
Sbjct: 14 TTTTSSSTPYGLTKDEFSTLDSIIRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFA 73
Query: 92 KPQSYKHFIKSCTV---SEGF-TMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFS 151
P YKHFIKSCT+ G +K+G REV+V+SGLPA TS E L++ D+E+R++ F
Sbjct: 74 NPNKYKHFIKSCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFR 133
Query: 152 IIGGEHRLRNYRSVTSVHQ---LERDGK--IWSVVLESYAVDVPPGNTEEDARLFADTVV 211
++GGEHRL NYRSVTSV++ LE+D K ++SVVLESY VD+P GNTEED R+F DTVV
Sbjct: 134 VLGGEHRLNNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVV 193
Query: 212 KLNLQKLASVA 214
K NLQ LA ++
Sbjct: 194 KSNLQNLAVIS 204
BLAST of CmaCh16G011540 vs. ExPASy Swiss-Prot
Match:
O80992 (Abscisic acid receptor PYL2 OS=Arabidopsis thaliana OX=3702 GN=PYL2 PE=1 SV=1)
HSP 1 Score: 196.4 bits (498), Expect = 3.3e-49
Identity = 91/174 (52.30%), Postives = 122/174 (70.11%), Query Frame = 0
Query: 42 GLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFDKPQSYKHFIK 101
GLT +E L ++ +H ++ C+SL+ QR+ AP VW ++RRFD P+ YKHF+K
Sbjct: 9 GLTDEEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVK 68
Query: 102 SCTVSEGFTMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFSIIGGEHRLRNYRSV 161
C + G +G REV VISGLPA TS ERL+ DD+ RV+ F ++GGEHRL+NY+SV
Sbjct: 69 RCRLISG-DGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSV 128
Query: 162 TSVHQL--ERDGKIWSVVLESYAVDVPPGNTEEDARLFADTVVKLNLQKLASVA 214
TSV++ + GK+++VVLESY VD+P GNTEED ++F DTVVKLNLQKL A
Sbjct: 129 TSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAA 181
BLAST of CmaCh16G011540 vs. TAIR 10
Match:
AT5G46790.1 (PYR1-like 1 )
HSP 1 Score: 289.3 bits (739), Expect = 2.7e-78
Identity = 134/194 (69.07%), Postives = 162/194 (83.51%), Query Frame = 0
Query: 31 LTTYHLAATPSGLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRF 90
++T H PS LTQDEF +L +AEFH Y+L GRCSSLLAQR+ APP+TVWS+VRRF
Sbjct: 20 ISTLHHQTMPSDLTQDEFTQLSQSIAEFHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRF 79
Query: 91 DKPQSYKHFIKSCTVSEGFTMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFSIIG 150
D+PQ YKHFIKSC VSE F M++GCTR+VNVISGLPA+TS+ERLD+ DD+RRV GFSI G
Sbjct: 80 DRPQIYKHFIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSITG 139
Query: 151 GEHRLRNYRSVTSVHQLER---DGKIWSVVLESYAVDVPPGNTEEDARLFADTVVKLNLQ 210
GEHRLRNY+SVT+VH+ E+ + +IW+VVLESY VDVP GN+EED RLFADTV++LNLQ
Sbjct: 140 GEHRLRNYKSVTTVHRFEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQ 199
Query: 211 KLASVAEVMNRGDN 222
KLAS+ E MNR +N
Sbjct: 200 KLASITEAMNRNNN 213
BLAST of CmaCh16G011540 vs. TAIR 10
Match:
AT4G17870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )
HSP 1 Score: 270.4 bits (690), Expect = 1.3e-72
Identity = 128/183 (69.95%), Postives = 154/183 (84.15%), Query Frame = 0
Query: 40 PSGLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFDKPQSYKHF 99
PS LT +E EL++ +AEFH Y+L G CSSL AQR+ APP+ VWSIVRRFDKPQ+YKHF
Sbjct: 2 PSELTPEERSELKNSIAEFHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHF 61
Query: 100 IKSCTVSEGFTMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFSIIGGEHRLRNYR 159
IKSC+V + F M++GCTR+V VISGLPA+TS ERLDI DDERRV GFSIIGGEHRL NY+
Sbjct: 62 IKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYK 121
Query: 160 SVTSVHQLERDGKIWSVVLESYAVDVPPGNTEEDARLFADTVVKLNLQKLASVAEVM--N 219
SVT+VH+ E++ +IW+VVLESY VD+P GN+E+D R+FADTVVKLNLQKLA+VAE M N
Sbjct: 122 SVTTVHRFEKENRIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEAMARN 181
Query: 220 RGD 221
GD
Sbjct: 182 SGD 184
BLAST of CmaCh16G011540 vs. TAIR 10
Match:
AT1G73000.1 (PYR1-like 3 )
HSP 1 Score: 200.3 bits (508), Expect = 1.6e-51
Identity = 101/191 (52.88%), Postives = 132/191 (69.11%), Query Frame = 0
Query: 32 TTYHLAATPSGLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFD 91
TT ++TP GLT+DEF L ++ H + S C+SL+A RV AP +W VR F
Sbjct: 14 TTTTSSSTPYGLTKDEFSTLDSIIRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFA 73
Query: 92 KPQSYKHFIKSCTV---SEGF-TMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFS 151
P YKHFIKSCT+ G +K+G REV+V+SGLPA TS E L++ D+E+R++ F
Sbjct: 74 NPNKYKHFIKSCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFR 133
Query: 152 IIGGEHRLRNYRSVTSVHQ---LERDGK--IWSVVLESYAVDVPPGNTEEDARLFADTVV 211
++GGEHRL NYRSVTSV++ LE+D K ++SVVLESY VD+P GNTEED R+F DTVV
Sbjct: 134 VLGGEHRLNNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVV 193
Query: 212 KLNLQKLASVA 214
K NLQ LA ++
Sbjct: 194 KSNLQNLAVIS 204
BLAST of CmaCh16G011540 vs. TAIR 10
Match:
AT2G26040.1 (PYR1-like 2 )
HSP 1 Score: 196.4 bits (498), Expect = 2.4e-50
Identity = 91/174 (52.30%), Postives = 122/174 (70.11%), Query Frame = 0
Query: 42 GLTQDEFDELRDLVAEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFDKPQSYKHFIK 101
GLT +E L ++ +H ++ C+SL+ QR+ AP VW ++RRFD P+ YKHF+K
Sbjct: 9 GLTDEEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVK 68
Query: 102 SCTVSEGFTMKLGCTREVNVISGLPADTSKERLDIHDDERRVIGFSIIGGEHRLRNYRSV 161
C + G +G REV VISGLPA TS ERL+ DD+ RV+ F ++GGEHRL+NY+SV
Sbjct: 69 RCRLISG-DGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSV 128
Query: 162 TSVHQL--ERDGKIWSVVLESYAVDVPPGNTEEDARLFADTVVKLNLQKLASVA 214
TSV++ + GK+++VVLESY VD+P GNTEED ++F DTVVKLNLQKL A
Sbjct: 129 TSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAA 181
BLAST of CmaCh16G011540 vs. TAIR 10
Match:
AT2G38310.1 (PYR1-like 4 )
HSP 1 Score: 186.8 bits (473), Expect = 1.9e-47
Identity = 88/159 (55.35%), Postives = 115/159 (72.33%), Query Frame = 0
Query: 56 AEFHMYKLSRGRCSSLLAQRVQAPPDTVWSIVRRFDKPQSYKHFIKSCTVSEGFTMKLGC 115
A FH +++ +C S + Q + AP TVWS+VRRFD PQ+YKHF+KSC+V G +G
Sbjct: 40 ARFHTHEVGPNQCCSAVIQEISAPISTVWSVVRRFDNPQAYKHFLKSCSVIGGDGDNVGS 99
Query: 116 TREVNVISGLPADTSKERLDIHDDERRVIGFSIIGGEHRLRNYRSVTSVHQLERDGKIWS 175
R+V+V+SGLPA +S ERLDI DDER VI FS++GG+HRL NYRSVT++H G +
Sbjct: 100 LRQVHVVSGLPAASSTERLDILDDERHVISFSVVGGDHRLSNYRSVTTLHPSPISG---T 159
Query: 176 VVLESYAVDVPPGNTEEDARLFADTVVKLNLQKLASVAE 215
VV+ESY VDVPPGNT+E+ F D +V+ NLQ LA +AE
Sbjct: 160 VVVESYVVDVPPGNTKEETCDFVDVIVRCNLQSLAKIAE 195
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8VZS8 | 3.8e-77 | 69.07 | Abscisic acid receptor PYL1 OS=Arabidopsis thaliana OX=3702 GN=PYL1 PE=1 SV=1 | [more] |
O49686 | 1.8e-71 | 69.95 | Abscisic acid receptor PYR1 OS=Arabidopsis thaliana OX=3702 GN=PYR1 PE=1 SV=1 | [more] |
Q7XBY6 | 1.2e-54 | 60.00 | Abscisic acid receptor PYL10 OS=Oryza sativa subsp. japonica OX=39947 GN=PYL10 P... | [more] |
Q9SSM7 | 2.3e-50 | 52.88 | Abscisic acid receptor PYL3 OS=Arabidopsis thaliana OX=3702 GN=PYL3 PE=1 SV=1 | [more] |
O80992 | 3.3e-49 | 52.30 | Abscisic acid receptor PYL2 OS=Arabidopsis thaliana OX=3702 GN=PYL2 PE=1 SV=1 | [more] |