Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGGGATTTCCTTTCATTTTCAGGGGAAGGGGGACTTGGAAATTTCAGCCGCGTTATCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAAAAGGGGGAAGAACACCAAGAACTCGAAGAACAACAAGAAGGGTTTTCTTATTTTCTTTTACCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGTTTCCACTCTCTCTTCTTCCTTTGGCGGTGGCGGTGGCGGTGGCGGTGGTTGTGTTCCTTCACTTCCTCCGGAGACCCCTTCTGTTGAGCCGCTCGCCGGAGCTGGTGTTGGGAACGCCATTTTTTCTAGTGGATTGGAAGATTTGGAGAGTATGTGGTCGGAAACTGCCGGCCCTGAACAGTCGTTTCTCCGATGGATCGCCGGGGATGTTGAAGATTCCAGTATGGGGAGTAAAAACCCCTTTGATTTCGATGGCAATGCCGGTATCGGAATTGTCGAACAGGGTTCTGAATTTGGCCGCGGAGCTGGTAATGTTCTTGCTAACATTAATCCTAATTTATCGTTTCCTGTTCCTGCTTGTGGGGGGGCTAATTACAAGAGTTCTAGTTTGGGGATGAACAATCGCCATGGGAATTTGAATCTTCAGAGCCCTATCTTTAATGGGTCTCTTGAAAATGTTGTTGTTCCTGTTTCTGGTTTGATTCAGCCATTTGAGCGCCCTGATGAGAAGCCCCAGAGTTTGAATGCTGCTCAGGTTTTGTTGAACCAGCACCAGCACCAGCACCCTCAGAATCCTAGCTTCTTTGTGCCATTGATGTTTGGTCAACAAGAACAGCAGCTCCAGCCTCAGCTGAAGAGGCATAATTCGAGCGGAGCACTCGACGCGAATCCCAACGGGCCGATACCGATACCGAATGAGATTTTGATGAGGAATCATCAGGTGCAGGTGTTGCAGCAGCAGCAGCTTGGTTATGCACCTGGTTTGCAGTGTCTTCCTCAGCAGAAGGCAATGTCCCCGAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGGCGTATAACAATCCCCCACAGCAACAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCGGCGGAGCTGGTCGGGACTGGGAACTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCGGTTAATCCTCCTCCACCTCGCTGCCCTACACCGGTCGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCCGAAATCTCCCCACTTGTTCAGTTTGTGAATTTCACCTGCAATCAGGCACTGCTCGAGGCTCTCGACGACGTTGGTCGAATTCACATTGTAGATTTTGATATTGGTTTTGGAGCACAATGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCAGGGTGCATCACTCAAAATTACTGCTTTTGCCTCTCCCTCGACTCATCATCCGATCGAACTCGGGCTAATGCGCGAAAATCTCACTCAATTTGCTAATGACATTGGGATAAGTTTCGAGTTCGATATGATCAACTTCGATTCCTTGAACCAGAACTCCTTTTCGTTGCCATTTTCTCGAGCAAACGAAAACGAGGCTATTGCAGTAAACTTCCCTCTATGTTCGACATCGAATCAACCAGCATTGCTTCCATCTCTCCTCCGTTTCATCAAACAACTCTCACCGAAACTTGTTGTTTCACTTGACCGAGGGTGCGATCGAAGTGACCTCCCATTTCCTCAGCATATGCTTCAGGCACTTCAGTCCTACATTAACCTCCTGGAATCTCTGGATGCTATTAATATGAACTCGGACGCTGTGAACAAGATCGAGAGGTTTCTTTTGCAACCGAGAATCGAAAGCACTGTTCTGGGGCGGCTTCGAGCGCCTGAAAGAATGCCCCTTTGGAAAACACTCTTTGCCTCTGCTGGCTTTACACCAGTAAACTTCAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTCGAGAAACGCCAGGCTTCCCTAGTTTTATGCTGGCAGCGTCGGGAGCTCATCTCCGCTTCGGCCTGGAGATGTTGA
mRNA sequence
ATGAGGGGGATTTCCTTTCATTTTCAGGGGAAGGGGGACTTGGAAATTTCAGCCGCGTTATCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAAAAGGGGGAAGAACACCAAGAACTCGAAGAACAACAAGAAGGGTTTTCTTATTTTCTTTTACCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGTTTCCACTCTCTCTTCTTCCTTTGGCGGTGGCGGTGGCGGTGGCGGTGGTTGTGTTCCTTCACTTCCTCCGGAGACCCCTTCTGTTGAGCCGCTCGCCGGAGCTGGTGTTGGGAACGCCATTTTTTCTAGTGGATTGGAAGATTTGGAGAGTATGTGGTCGGAAACTGCCGGCCCTGAACAGTCGTTTCTCCGATGGATCGCCGGGGATGTTGAAGATTCCAGTATGGGGAGTAAAAACCCCTTTGATTTCGATGGCAATGCCGGTATCGGAATTGTCGAACAGGGTTCTGAATTTGGCCGCGGAGCTGGTAATGTTCTTGCTAACATTAATCCTAATTTATCGTTTCCTGTTCCTGCTTGTGGGGGGGCTAATTACAAGAGTTCTAGTTTGGGGATGAACAATCGCCATGGGAATTTGAATCTTCAGAGCCCTATCTTTAATGGGTCTCTTGAAAATGTTGTTGTTCCTGTTTCTGGTTTGATTCAGCCATTTGAGCGCCCTGATGAGAAGCCCCAGAGTTTGAATGCTGCTCAGGTTTTGTTGAACCAGCACCAGCACCAGCACCCTCAGAATCCTAGCTTCTTTGTGCCATTGATGTTTGGTCAACAAGAACAGCAGCTCCAGCCTCAGCTGAAGAGGCATAATTCGAGCGGAGCACTCGACGCGAATCCCAACGGGCCGATACCGATACCGAATGAGATTTTGATGAGGAATCATCAGGTGCAGGTGTTGCAGCAGCAGCAGCTTGGTTATGCACCTGGTTTGCAGTGTCTTCCTCAGCAGAAGGCAATGTCCCCGAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGGCGTATAACAATCCCCCACAGCAACAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCGGCGGAGCTGGTCGGGACTGGGAACTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCGGTTAATCCTCCTCCACCTCGCTGCCCTACACCGGTCGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCCGAAATCTCCCCACTTGTTCAGTTTGTGAATTTCACCTGCAATCAGGCACTGCTCGAGGCTCTCGACGACGTTGGTCGAATTCACATTGTAGATTTTGATATTGGTTTTGGAGCACAATGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCAGGGTGCATCACTCAAAATTACTGCTTTTGCCTCTCCCTCGACTCATCATCCGATCGAACTCGGGCTAATGCGCGAAAATCTCACTCAATTTGCTAATGACATTGGGATAAGTTTCGAGTTCGATATGATCAACTTCGATTCCTTGAACCAGAACTCCTTTTCGTTGCCATTTTCTCGAGCAAACGAAAACGAGGCTATTGCAGTAAACTTCCCTCTATGTTCGACATCGAATCAACCAGCATTGCTTCCATCTCTCCTCCGTTTCATCAAACAACTCTCACCGAAACTTGTTGTTTCACTTGACCGAGGGTGCGATCGAAGTGACCTCCCATTTCCTCAGCATATGCTTCAGGCACTTCAGTCCTACATTAACCTCCTGGAATCTCTGGATGCTATTAATATGAACTCGGACGCTGTGAACAAGATCGAGAGGTTTCTTTTGCAACCGAGAATCGAAAGCACTGTTCTGGGGCGGCTTCGAGCGCCTGAAAGAATGCCCCTTTGGAAAACACTCTTTGCCTCTGCTGGCTTTACACCAGTAAACTTCAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTCGAGAAACGCCAGGCTTCCCTAGTTTTATGCTGGCAGCGTCGGGAGCTCATCTCCGCTTCGGCCTGGAGATGTTGA
Coding sequence (CDS)
ATGAGGGGGATTTCCTTTCATTTTCAGGGGAAGGGGGACTTGGAAATTTCAGCCGCGTTATCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAAAAGGGGGAAGAACACCAAGAACTCGAAGAACAACAAGAAGGGTTTTCTTATTTTCTTTTACCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGTTTCCACTCTCTCTTCTTCCTTTGGCGGTGGCGGTGGCGGTGGCGGTGGTTGTGTTCCTTCACTTCCTCCGGAGACCCCTTCTGTTGAGCCGCTCGCCGGAGCTGGTGTTGGGAACGCCATTTTTTCTAGTGGATTGGAAGATTTGGAGAGTATGTGGTCGGAAACTGCCGGCCCTGAACAGTCGTTTCTCCGATGGATCGCCGGGGATGTTGAAGATTCCAGTATGGGGAGTAAAAACCCCTTTGATTTCGATGGCAATGCCGGTATCGGAATTGTCGAACAGGGTTCTGAATTTGGCCGCGGAGCTGGTAATGTTCTTGCTAACATTAATCCTAATTTATCGTTTCCTGTTCCTGCTTGTGGGGGGGCTAATTACAAGAGTTCTAGTTTGGGGATGAACAATCGCCATGGGAATTTGAATCTTCAGAGCCCTATCTTTAATGGGTCTCTTGAAAATGTTGTTGTTCCTGTTTCTGGTTTGATTCAGCCATTTGAGCGCCCTGATGAGAAGCCCCAGAGTTTGAATGCTGCTCAGGTTTTGTTGAACCAGCACCAGCACCAGCACCCTCAGAATCCTAGCTTCTTTGTGCCATTGATGTTTGGTCAACAAGAACAGCAGCTCCAGCCTCAGCTGAAGAGGCATAATTCGAGCGGAGCACTCGACGCGAATCCCAACGGGCCGATACCGATACCGAATGAGATTTTGATGAGGAATCATCAGGTGCAGGTGTTGCAGCAGCAGCAGCTTGGTTATGCACCTGGTTTGCAGTGTCTTCCTCAGCAGAAGGCAATGTCCCCGAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGGCGTATAACAATCCCCCACAGCAACAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCGGCGGAGCTGGTCGGGACTGGGAACTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCGGTTAATCCTCCTCCACCTCGCTGCCCTACACCGGTCGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCCGAAATCTCCCCACTTGTTCAGTTTGTGAATTTCACCTGCAATCAGGCACTGCTCGAGGCTCTCGACGACGTTGGTCGAATTCACATTGTAGATTTTGATATTGGTTTTGGAGCACAATGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCAGGGTGCATCACTCAAAATTACTGCTTTTGCCTCTCCCTCGACTCATCATCCGATCGAACTCGGGCTAATGCGCGAAAATCTCACTCAATTTGCTAATGACATTGGGATAAGTTTCGAGTTCGATATGATCAACTTCGATTCCTTGAACCAGAACTCCTTTTCGTTGCCATTTTCTCGAGCAAACGAAAACGAGGCTATTGCAGTAAACTTCCCTCTATGTTCGACATCGAATCAACCAGCATTGCTTCCATCTCTCCTCCGTTTCATCAAACAACTCTCACCGAAACTTGTTGTTTCACTTGACCGAGGGTGCGATCGAAGTGACCTCCCATTTCCTCAGCATATGCTTCAGGCACTTCAGTCCTACATTAACCTCCTGGAATCTCTGGATGCTATTAATATGAACTCGGACGCTGTGAACAAGATCGAGAGGTTTCTTTTGCAACCGAGAATCGAAAGCACTGTTCTGGGGCGGCTTCGAGCGCCTGAAAGAATGCCCCTTTGGAAAACACTCTTTGCCTCTGCTGGCTTTACACCAGTAAACTTCAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTCGAGAAACGCCAGGCTTCCCTAGTTTTATGCTGGCAGCGTCGGGAGCTCATCTCCGCTTCGGCCTGGAGATGTTGA
Protein sequence
MRGISFHFQGKGDLEISAALSSSPICSGFAEKWVKKGEEHQELEEQQEGFSYFLLPNNEPTSVLHMRSPSPPTSVSTLSSSFGGGGGGGGGCVPSLPPETPSVEPLAGAGVGNAIFSSGLEDLESMWSETAGPEQSFLRWIAGDVEDSSMGSKNPFDFDGNAGIGIVEQGSEFGRGAGNVLANINPNLSFPVPACGGANYKSSSLGMNNRHGNLNLQSPIFNGSLENVVVPVSGLIQPFERPDEKPQSLNAAQVLLNQHQHQHPQNPSFFVPLMFGQQEQQLQPQLKRHNSSGALDANPNGPIPIPNEILMRNHQVQVLQQQQLGYAPGLQCLPQQKAMSPKPKVVGLGDEMAYNNPPQQQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVNPPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEALDDVGRIHIVDFDIGFGAQWASFMQELSLRNQGASLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFDMINFDSLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALLPSLLRFIKQLSPKLVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWRC
Homology
BLAST of CmaCh16G011440 vs. ExPASy Swiss-Prot
Match:
O81316 (Scarecrow-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SCL6 PE=1 SV=1)
HSP 1 Score: 369.8 bits (948), Expect = 7.2e-101
Identity = 200/368 (54.35%), Postives = 255/368 (69.29%), Query Frame = 0
Query: 365 LLDQLYKAAELVGTGNFSHAQGILARLNHQL-SPVGKPLQRAAFYFKEAL-QLLLLMNNP 424
+ +QL KAAE++ + AQGILARLN QL SPVGKPL+RAAFYFKEAL LL ++
Sbjct: 205 ITEQLVKAAEVI-ESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQT 264
Query: 425 VNPPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEALDDVGRIHIVDFDIG 484
+N P +IFK+ AYK FSEISP++QF NFT NQALLE+ R+HI+DFDIG
Sbjct: 265 LN--------PYSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIG 324
Query: 485 FGAQWASFMQELSLRNQGA--SLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFD 544
+G QWAS MQEL LR+ A SLKIT FASP+ H +ELG ++NL FA++I IS +
Sbjct: 325 YGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEINISLDIQ 384
Query: 545 MINFDSLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALLPSLLRFIKQLSPKLVVSLD 604
+++ D L S+ + ++E EA+AVN S S+ LP +LRF+K LSP ++V D
Sbjct: 385 VLSLDLLG----SISWPNSSEKEAVAVNISAASFSH----LPLVLRFVKHLSPTIIVCSD 444
Query: 605 RGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRA 664
RGC+R+DLPF Q + +L S+ L ESLDA+N N DA+ KIERFL+QP IE VL R R
Sbjct: 445 RGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRP 504
Query: 665 PER-MPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRREL 724
ER M W+ +F GF+PV SNFTE+QAEC+ +RT VRGFHVEK+ SL+LCWQR EL
Sbjct: 505 IERPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTEL 555
Query: 725 ISASAWRC 728
+ SAWRC
Sbjct: 565 VGVSAWRC 555
BLAST of CmaCh16G011440 vs. ExPASy Swiss-Prot
Match:
Q7XJM8 (Scarecrow-like protein 27 OS=Arabidopsis thaliana OX=3702 GN=SCL27 PE=2 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 2.2e-97
Identity = 280/752 (37.23%), Postives = 383/752 (50.93%), Query Frame = 0
Query: 8 FQGKGDLEISAALSSSPICSGFAEKWVKKGEEHQELEEQQEGFSYFL---LPNNEPTSVL 67
FQG+G LSSS S + W + E +QE Y + LP EPTSVL
Sbjct: 8 FQGEGVF----GLSSSSFYSDSQKIW----SNQDKTEAKQEDLGYVVGGFLP--EPTSVL 67
Query: 68 H-MRSPSPPTSVSTLSSSFGGGGGGGGGCVPSLPPETPSVEPLAGAGVGNAIFSSGLEDL 127
+RSPSP S S+ +++ GGGG V T + N GL+DL
Sbjct: 68 DALRSPSPLASYSSTTTTLSSSHGGGGTTV------TNTTVTAGDDNNNNKCSQMGLDDL 127
Query: 128 ESMWSETA-GPEQSFLRWIAGDVEDSSMGSKNPFDFDGNAGIGIVEQGSEFGRGAGNVLA 187
+ + S ++ G EQS LR I D + G+ + G FG G+G V A
Sbjct: 128 DGVLSASSPGQEQSILRLI----------------MDPGSAFGVFDPGFGFGSGSGPVSA 187
Query: 188 NINPNLSFPVPACGGANYKSSSLGMNNRHGNLNLQSPIFNGSLENVVVPVSGLIQPFERP 247
++ N S+L N PF+
Sbjct: 188 PVSDN---------------SNLLCN----------------------------FPFQ-- 247
Query: 248 DEKPQSLNAAQVLLNQHQHQHPQNPSFFVPLMFGQQEQQLQPQLKRHNSSGALDANPNGP 307
+ N A+ L+N H NP L P KR N SG+L P P
Sbjct: 248 ----EITNPAEALINPSNHCLFYNP-------------PLSPPAKRFN-SGSLH-QPVFP 307
Query: 308 IPIP---NEILMRNHQVQV-----LQQQQLGYAPGLQCLPQQKAMSPKPKVVGLGDEMAY 367
+ P ++ + R HQ Q QQQQ + + AM P P GD+
Sbjct: 308 LSDPDPGHDPVRRQHQFQFPFYHNNQQQQFPSSSSSTAV----AMVPVPSPGMAGDD--- 367
Query: 368 NNPPQQQQHALLDQLYKAAELVGT---GNFSH---AQGILARLNHQLSPVG---KPLQRA 427
Q +++QL+ AAEL+GT N H AQGILARLNH L+ P QRA
Sbjct: 368 -------QSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHKSPFQRA 427
Query: 428 AFYFKEALQLLLLMNNPVNPPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALL 487
A + EA LL L++N +PP TP ++I ++ AY+ FSE SP +QFVNFT NQ++L
Sbjct: 428 ASHIAEA--LLSLIHNESSPP---LITPENLILRIAAYRSFSETSPFLQFVNFTANQSIL 487
Query: 488 EALDDVG--RIHIVDFDIGFGAQWASFMQELS------LRNQGASLKITAFASP--STHH 547
E+ ++ G RIHI+DFD+G+G QW+S MQEL+ RN+ +SLK+T FA P +
Sbjct: 488 ESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSD 547
Query: 548 PIELGLMRENLTQFANDIGISFEFDMINFDSLNQNSFSLPFSRANENEAIAVNFPLCSTS 607
EL ENL FA ++ I FE ++++ + L ++ R++E EAIAVN P+ S +
Sbjct: 548 EFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPVNSVA 607
Query: 608 NQPALLPSLLRFIKQLSPKLVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNS 667
+ LP +LRF+KQLSP +VV DRGCDR+D PFP ++ +LQ + +LLESLDA N N
Sbjct: 608 S--GYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDA-NQNQ 640
Query: 668 DAVNKIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKR 727
D + IERF +QP IE ++ R R ER P W+ LF GF+P + S E QAEC+ +R
Sbjct: 668 DD-SSIERFWVQPSIEKLLMKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQR 640
BLAST of CmaCh16G011440 vs. ExPASy Swiss-Prot
Match:
Q9M000 (Scarecrow-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=SCL22 PE=1 SV=1)
HSP 1 Score: 336.3 bits (861), Expect = 8.8e-91
Identity = 278/751 (37.02%), Postives = 368/751 (49.00%), Query Frame = 0
Query: 8 FQGKGDLEISAALSSSPICSGFAEKWVKKGEEHQELEEQQEGFSYFLLPN---NEPTSVL 67
FQGKG L + SSSP G+ + W + H +EE F++ N +EPTSVL
Sbjct: 8 FQGKGVLGFLDS-SSSP---GY-KIWANPEKLHGRVEED----LCFVVNNGGFSEPTSVL 67
Query: 68 -HMRSPSP--PTSVSTLSSSFGGGGGGGGGCVPSLPPETPSVEPLAGAGVGNAIFSSGLE 127
+RSPSP +S +TLSSS GG GGG +G G E
Sbjct: 68 DSVRSPSPFVSSSTTTLSSSHGGPSGGGAAAA-------------TFSGADGKCDQMGFE 127
Query: 128 DLESMWS-ETAGPEQSFLRWI-AGDVEDSSMGSKNPFDFDGNAGIGIVEQGSEFGRGAGN 187
DL+ + S + G EQS R I AGDV D G G + G G+
Sbjct: 128 DLDGVLSGGSPGQEQSIFRLIMAGDVVDP----------------GSEFVGFDIGSGSDP 187
Query: 188 VLANINPNLSFPVPACGGANYKSSSLGMNNRHGNLNLQSPIFNGSLENVVVPVSGLIQPF 247
V+ N N P+ G PF
Sbjct: 188 VIDNPN---------------------------------------------PLFGYGFPF 247
Query: 248 ERPDEKPQSLNAAQVLLNQHQHQHPQNPSFFVPLMFGQQEQQLQPQLKRHNSSGALDANP 307
+ E+ + Q+ +N NP FF + P KR NS +
Sbjct: 248 QNAPEEEK----FQISIN-------PNPGFF-------SDPPSSPPAKRLNSGQPGSQHL 307
Query: 308 NGPIPIPNEILMRNHQVQVLQQQQLGYAPGLQCLPQQKAMSPKPKVVGLGDEMAYNNPPQ 367
P + PG + ++P PK+ G + Q
Sbjct: 308 QWVFPFSD--------------------PGHE--SHDPFLTP-PKIAG------EDQNDQ 367
Query: 368 QQQHALLDQLYK-AAELVGTGNFSH---AQGILARLNHQLSPVG--------KPLQRAAF 427
Q ++DQL+ AAEL G ++ AQGILARLNH L+ P RAA
Sbjct: 368 DQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNNDDTNNNPKPPFHRAAS 427
Query: 428 YFKEALQLLLLMNNPVNPPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEA 487
Y EAL LL + PP P ++IF++ AY+ FSE SP +QFVNFT NQ +LE+
Sbjct: 428 YITEALHSLL---QDSSLSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTILES 487
Query: 488 LDDVGRIHIVDFDIGFGAQWASFMQELS-LRNQGA---SLKITAFASPST-HHPIELGLM 547
+ RIHIVDFDIG+G QWAS +QEL+ RN+ + SLKITAFASPST EL
Sbjct: 488 FEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFELRFT 547
Query: 548 RENLTQFANDIGISFEFDMINFD-SLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALL 607
ENL FA + G+SFE +++N + LN + L R++E EAIAVN P+ S + L
Sbjct: 548 EENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPISSMVS--GYL 607
Query: 608 PSLLRFIKQLSPKLVVSLDRGCDR-SDLPFPQHMLQALQSYINLLESLDAINM-NSDAVN 667
P +LRF+KQ+SP +VV DR CDR +D PFP ++ ALQ Y +LLESLD+ N+ N++A
Sbjct: 608 PLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAAT 623
Query: 668 KIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVR 727
IERF +QP I+ + R R ER P W++LF GFTPV S ETQAE + +R +R
Sbjct: 668 SIERFCVQPSIQKLLTNRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMR 623
BLAST of CmaCh16G011440 vs. ExPASy Swiss-Prot
Match:
O23210 (Scarecrow-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SCL15 PE=1 SV=3)
HSP 1 Score: 208.8 bits (530), Expect = 2.1e-52
Identity = 133/371 (35.85%), Postives = 207/371 (55.80%), Query Frame = 0
Query: 366 LDQLYKAAELVGTGNFSHAQGILARLNHQL-SPVGKPLQRAAFYFKEALQLLLLMNNPVN 425
++ L + + V + AQ +L+RLN +L SP G+PLQRAAFYFKEAL L + N
Sbjct: 123 IEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGS---N 182
Query: 426 PPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEALDDVGR---IHIVDFDI 485
P R + +++ ++ A K +S ISP+ F +FT NQA+L++L +H+VDF+I
Sbjct: 183 RNPIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEI 242
Query: 486 GFGAQWASFMQELSLRN-QGASLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFD 545
GFG Q+AS M+E++ ++ G L++TA + +E L++ENLTQFA ++ I F+ +
Sbjct: 243 GFGGQYASLMREITEKSVSGGFLRVTAVVAEEC--AVETRLVKENLTQFAAEMKIRFQIE 302
Query: 546 MINFDSLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALLPSLLRFIKQLSPKLVVSLD 605
+ + SF E + ++ + + + + + ++++SPK+VV +D
Sbjct: 303 FVLMKTFEMLSFKAIRFVEGERTVVLIS---PAIFRRLSGITDFVNNLRRVSPKVVVFVD 362
Query: 606 -RGCDR--SDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKI-ERFLLQPRIESTV-L 665
G F + + AL+ Y +LESLDA D V KI E F+L+P+I + V
Sbjct: 363 SEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVET 422
Query: 666 GRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQ 725
R W+ F +AG P+ S F + QAEC+ ++ VRGFHV KRQ LVLCW
Sbjct: 423 AADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWH 482
Query: 726 RRELISASAWR 727
R L++ SAWR
Sbjct: 483 GRALVATSAWR 485
BLAST of CmaCh16G011440 vs. ExPASy Swiss-Prot
Match:
A0A0M4FMK2 (GRAS family protein RAM1 OS=Petunia hybrida OX=4102 GN=RAM1 PE=2 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 3.8e-33
Identity = 158/612 (25.82%), Postives = 248/612 (40.52%), Query Frame = 0
Query: 187 NLSFPVPACGGANYKSSSLGMNNRHGNLNLQS--PIFNGSLENVVVPVSGLIQPFERPDE 246
NL P PA +++ SS NN + N N+ + +G + P + + P
Sbjct: 100 NLPSPQPA---SSFSSSHNNGNNNNNNYNIYAHRQGIHGQDMMMCSPPRSPLGLYNHPSH 159
Query: 247 KPQSLNAAQVLLNQHQHQHPQNPSFFVPLMFG------QQEQQLQPQLKRHNSSG----- 306
K + L+ Q + N +Q Q SF +P + +E+ L SG
Sbjct: 160 KGKGLSPLQKVFNSPNNQFMQIESFNLPALESFLDDDYDKEEDLASSYSTLKVSGTGVAG 219
Query: 307 -------ALDANPNG-------PIPIPN-------EILMRNHQVQVL------------- 366
AL P+ P + N +L VQV+
Sbjct: 220 SSSESFDALSVVPDDLLECLALPSSLSNTSGGFMESLLSDTSAVQVINPDDEIFRTGSIA 279
Query: 367 -----------QQQQLGYAPGLQCLPQQKAMSPKPKVVGLGDEMAYNNPPQQQQHA--LL 426
Q++Q P PQQ+ + +V L P Q+Q L+
Sbjct: 280 PLSQQLHQERQQEKQQKQRPVTHARPQQQQIINHNVLVPLAAA-----PDQEQDSGLQLV 339
Query: 427 DQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVNPP 486
L AE V ++ A+ L LN ++P+G +QR A F EAL L P
Sbjct: 340 HLLLACAEAVSKEDYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLATKPS 399
Query: 487 ----PPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEALDDVGRIHIVDFDIG 546
P P P + + + Y++ + P V+F +FT NQA+ EA + R+HI+D DI
Sbjct: 400 TSALKPFNPFPPNSLEILKIYQILYQACPYVKFAHFTANQAIFEAFEAEERVHIIDLDIL 459
Query: 547 FGAQWASFMQELSLRNQGASLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFDMI 606
G QW +FMQ L+ R GA PS E G LT+ A+ + + FEF +
Sbjct: 460 QGYQWPAFMQALAARPGGAPFLRITGVGPSPEAVRETG---RCLTELAHSLHVPFEFHPV 519
Query: 607 --NFDSLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALLPSLLRFIKQLSPKLVVSLD 666
+ L + F+ EA+AVN + +LL I+ +P +V ++
Sbjct: 520 GEQLEDLKPHMFN-----RRVGEALAVNSVNRLHRVPVNCIGNLLAMIRDQAPNIVTIVE 579
Query: 667 RGCDRSDLPFPQHMLQALQSYINLLESLDA-INMNSDAVNKIERFLLQPRIESTVL---- 726
+ + F L+AL Y + +SLDA +S K+E+++ P I + V
Sbjct: 580 QEASHNGPYFLGRFLEALHYYSAIFDSLDATFPADSSQRAKLEQYIFAPEIMNIVSCEGP 639
Query: 727 GRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQ 728
R+ ER+ W+ L GF V S TQ++ + S G+ + + L+L WQ
Sbjct: 640 ERVVRHERLEKWRRLMEGKGFKGVALSANAVTQSKILLGLYSCDGYKLTEDDGCLLLGWQ 695
BLAST of CmaCh16G011440 vs. TAIR 10
Match:
AT4G00150.1 (GRAS family transcription factor )
HSP 1 Score: 369.8 bits (948), Expect = 5.1e-102
Identity = 200/368 (54.35%), Postives = 255/368 (69.29%), Query Frame = 0
Query: 365 LLDQLYKAAELVGTGNFSHAQGILARLNHQL-SPVGKPLQRAAFYFKEAL-QLLLLMNNP 424
+ +QL KAAE++ + AQGILARLN QL SPVGKPL+RAAFYFKEAL LL ++
Sbjct: 205 ITEQLVKAAEVI-ESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQT 264
Query: 425 VNPPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEALDDVGRIHIVDFDIG 484
+N P +IFK+ AYK FSEISP++QF NFT NQALLE+ R+HI+DFDIG
Sbjct: 265 LN--------PYSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIG 324
Query: 485 FGAQWASFMQELSLRNQGA--SLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFD 544
+G QWAS MQEL LR+ A SLKIT FASP+ H +ELG ++NL FA++I IS +
Sbjct: 325 YGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEINISLDIQ 384
Query: 545 MINFDSLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALLPSLLRFIKQLSPKLVVSLD 604
+++ D L S+ + ++E EA+AVN S S+ LP +LRF+K LSP ++V D
Sbjct: 385 VLSLDLLG----SISWPNSSEKEAVAVNISAASFSH----LPLVLRFVKHLSPTIIVCSD 444
Query: 605 RGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRA 664
RGC+R+DLPF Q + +L S+ L ESLDA+N N DA+ KIERFL+QP IE VL R R
Sbjct: 445 RGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRP 504
Query: 665 PER-MPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRREL 724
ER M W+ +F GF+PV SNFTE+QAEC+ +RT VRGFHVEK+ SL+LCWQR EL
Sbjct: 505 IERPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTEL 555
Query: 725 ISASAWRC 728
+ SAWRC
Sbjct: 565 VGVSAWRC 555
BLAST of CmaCh16G011440 vs. TAIR 10
Match:
AT2G45160.1 (GRAS family transcription factor )
HSP 1 Score: 358.2 bits (918), Expect = 1.5e-98
Identity = 280/752 (37.23%), Postives = 383/752 (50.93%), Query Frame = 0
Query: 8 FQGKGDLEISAALSSSPICSGFAEKWVKKGEEHQELEEQQEGFSYFL---LPNNEPTSVL 67
FQG+G LSSS S + W + E +QE Y + LP EPTSVL
Sbjct: 8 FQGEGVF----GLSSSSFYSDSQKIW----SNQDKTEAKQEDLGYVVGGFLP--EPTSVL 67
Query: 68 H-MRSPSPPTSVSTLSSSFGGGGGGGGGCVPSLPPETPSVEPLAGAGVGNAIFSSGLEDL 127
+RSPSP S S+ +++ GGGG V T + N GL+DL
Sbjct: 68 DALRSPSPLASYSSTTTTLSSSHGGGGTTV------TNTTVTAGDDNNNNKCSQMGLDDL 127
Query: 128 ESMWSETA-GPEQSFLRWIAGDVEDSSMGSKNPFDFDGNAGIGIVEQGSEFGRGAGNVLA 187
+ + S ++ G EQS LR I D + G+ + G FG G+G V A
Sbjct: 128 DGVLSASSPGQEQSILRLI----------------MDPGSAFGVFDPGFGFGSGSGPVSA 187
Query: 188 NINPNLSFPVPACGGANYKSSSLGMNNRHGNLNLQSPIFNGSLENVVVPVSGLIQPFERP 247
++ N S+L N PF+
Sbjct: 188 PVSDN---------------SNLLCN----------------------------FPFQ-- 247
Query: 248 DEKPQSLNAAQVLLNQHQHQHPQNPSFFVPLMFGQQEQQLQPQLKRHNSSGALDANPNGP 307
+ N A+ L+N H NP L P KR N SG+L P P
Sbjct: 248 ----EITNPAEALINPSNHCLFYNP-------------PLSPPAKRFN-SGSLH-QPVFP 307
Query: 308 IPIP---NEILMRNHQVQV-----LQQQQLGYAPGLQCLPQQKAMSPKPKVVGLGDEMAY 367
+ P ++ + R HQ Q QQQQ + + AM P P GD+
Sbjct: 308 LSDPDPGHDPVRRQHQFQFPFYHNNQQQQFPSSSSSTAV----AMVPVPSPGMAGDD--- 367
Query: 368 NNPPQQQQHALLDQLYKAAELVGT---GNFSH---AQGILARLNHQLSPVG---KPLQRA 427
Q +++QL+ AAEL+GT N H AQGILARLNH L+ P QRA
Sbjct: 368 -------QSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHKSPFQRA 427
Query: 428 AFYFKEALQLLLLMNNPVNPPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALL 487
A + EA LL L++N +PP TP ++I ++ AY+ FSE SP +QFVNFT NQ++L
Sbjct: 428 ASHIAEA--LLSLIHNESSPP---LITPENLILRIAAYRSFSETSPFLQFVNFTANQSIL 487
Query: 488 EALDDVG--RIHIVDFDIGFGAQWASFMQELS------LRNQGASLKITAFASP--STHH 547
E+ ++ G RIHI+DFD+G+G QW+S MQEL+ RN+ +SLK+T FA P +
Sbjct: 488 ESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSD 547
Query: 548 PIELGLMRENLTQFANDIGISFEFDMINFDSLNQNSFSLPFSRANENEAIAVNFPLCSTS 607
EL ENL FA ++ I FE ++++ + L ++ R++E EAIAVN P+ S +
Sbjct: 548 EFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPVNSVA 607
Query: 608 NQPALLPSLLRFIKQLSPKLVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNS 667
+ LP +LRF+KQLSP +VV DRGCDR+D PFP ++ +LQ + +LLESLDA N N
Sbjct: 608 S--GYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDA-NQNQ 640
Query: 668 DAVNKIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKR 727
D + IERF +QP IE ++ R R ER P W+ LF GF+P + S E QAEC+ +R
Sbjct: 668 DD-SSIERFWVQPSIEKLLMKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQR 640
BLAST of CmaCh16G011440 vs. TAIR 10
Match:
AT3G60630.1 (GRAS family transcription factor )
HSP 1 Score: 336.3 bits (861), Expect = 6.3e-92
Identity = 278/751 (37.02%), Postives = 368/751 (49.00%), Query Frame = 0
Query: 8 FQGKGDLEISAALSSSPICSGFAEKWVKKGEEHQELEEQQEGFSYFLLPN---NEPTSVL 67
FQGKG L + SSSP G+ + W + H +EE F++ N +EPTSVL
Sbjct: 8 FQGKGVLGFLDS-SSSP---GY-KIWANPEKLHGRVEED----LCFVVNNGGFSEPTSVL 67
Query: 68 -HMRSPSP--PTSVSTLSSSFGGGGGGGGGCVPSLPPETPSVEPLAGAGVGNAIFSSGLE 127
+RSPSP +S +TLSSS GG GGG +G G E
Sbjct: 68 DSVRSPSPFVSSSTTTLSSSHGGPSGGGAAAA-------------TFSGADGKCDQMGFE 127
Query: 128 DLESMWS-ETAGPEQSFLRWI-AGDVEDSSMGSKNPFDFDGNAGIGIVEQGSEFGRGAGN 187
DL+ + S + G EQS R I AGDV D G G + G G+
Sbjct: 128 DLDGVLSGGSPGQEQSIFRLIMAGDVVDP----------------GSEFVGFDIGSGSDP 187
Query: 188 VLANINPNLSFPVPACGGANYKSSSLGMNNRHGNLNLQSPIFNGSLENVVVPVSGLIQPF 247
V+ N N P+ G PF
Sbjct: 188 VIDNPN---------------------------------------------PLFGYGFPF 247
Query: 248 ERPDEKPQSLNAAQVLLNQHQHQHPQNPSFFVPLMFGQQEQQLQPQLKRHNSSGALDANP 307
+ E+ + Q+ +N NP FF + P KR NS +
Sbjct: 248 QNAPEEEK----FQISIN-------PNPGFF-------SDPPSSPPAKRLNSGQPGSQHL 307
Query: 308 NGPIPIPNEILMRNHQVQVLQQQQLGYAPGLQCLPQQKAMSPKPKVVGLGDEMAYNNPPQ 367
P + PG + ++P PK+ G + Q
Sbjct: 308 QWVFPFSD--------------------PGHE--SHDPFLTP-PKIAG------EDQNDQ 367
Query: 368 QQQHALLDQLYK-AAELVGTGNFSH---AQGILARLNHQLSPVG--------KPLQRAAF 427
Q ++DQL+ AAEL G ++ AQGILARLNH L+ P RAA
Sbjct: 368 DQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNNDDTNNNPKPPFHRAAS 427
Query: 428 YFKEALQLLLLMNNPVNPPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEA 487
Y EAL LL + PP P ++IF++ AY+ FSE SP +QFVNFT NQ +LE+
Sbjct: 428 YITEALHSLL---QDSSLSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTILES 487
Query: 488 LDDVGRIHIVDFDIGFGAQWASFMQELS-LRNQGA---SLKITAFASPST-HHPIELGLM 547
+ RIHIVDFDIG+G QWAS +QEL+ RN+ + SLKITAFASPST EL
Sbjct: 488 FEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFELRFT 547
Query: 548 RENLTQFANDIGISFEFDMINFD-SLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALL 607
ENL FA + G+SFE +++N + LN + L R++E EAIAVN P+ S + L
Sbjct: 548 EENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPISSMVS--GYL 607
Query: 608 PSLLRFIKQLSPKLVVSLDRGCDR-SDLPFPQHMLQALQSYINLLESLDAINM-NSDAVN 667
P +LRF+KQ+SP +VV DR CDR +D PFP ++ ALQ Y +LLESLD+ N+ N++A
Sbjct: 608 PLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAAT 623
Query: 668 KIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVR 727
IERF +QP I+ + R R ER P W++LF GFTPV S ETQAE + +R +R
Sbjct: 668 SIERFCVQPSIQKLLTNRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMR 623
BLAST of CmaCh16G011440 vs. TAIR 10
Match:
AT4G36710.1 (GRAS family transcription factor )
HSP 1 Score: 208.8 bits (530), Expect = 1.5e-53
Identity = 133/371 (35.85%), Postives = 207/371 (55.80%), Query Frame = 0
Query: 366 LDQLYKAAELVGTGNFSHAQGILARLNHQL-SPVGKPLQRAAFYFKEALQLLLLMNNPVN 425
++ L + + V + AQ +L+RLN +L SP G+PLQRAAFYFKEAL L + N
Sbjct: 123 IEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGS---N 182
Query: 426 PPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEALDDVGR---IHIVDFDI 485
P R + +++ ++ A K +S ISP+ F +FT NQA+L++L +H+VDF+I
Sbjct: 183 RNPIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEI 242
Query: 486 GFGAQWASFMQELSLRN-QGASLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFD 545
GFG Q+AS M+E++ ++ G L++TA + +E L++ENLTQFA ++ I F+ +
Sbjct: 243 GFGGQYASLMREITEKSVSGGFLRVTAVVAEEC--AVETRLVKENLTQFAAEMKIRFQIE 302
Query: 546 MINFDSLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALLPSLLRFIKQLSPKLVVSLD 605
+ + SF E + ++ + + + + + ++++SPK+VV +D
Sbjct: 303 FVLMKTFEMLSFKAIRFVEGERTVVLIS---PAIFRRLSGITDFVNNLRRVSPKVVVFVD 362
Query: 606 -RGCDR--SDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKI-ERFLLQPRIESTV-L 665
G F + + AL+ Y +LESLDA D V KI E F+L+P+I + V
Sbjct: 363 SEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVET 422
Query: 666 GRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQ 725
R W+ F +AG P+ S F + QAEC+ ++ VRGFHV KRQ LVLCW
Sbjct: 423 AADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWH 482
Query: 726 RRELISASAWR 727
R L++ SAWR
Sbjct: 483 GRALVATSAWR 485
BLAST of CmaCh16G011440 vs. TAIR 10
Match:
AT5G66770.1 (GRAS family transcription factor )
HSP 1 Score: 141.4 bits (355), Expect = 3.0e-33
Identity = 112/380 (29.47%), Postives = 181/380 (47.63%), Query Frame = 0
Query: 365 LLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVN 424
LL +Y A + + + A L ++ +S +G P +R AFYF EAL L N+P
Sbjct: 217 LLKAIYDCAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPAT 276
Query: 425 PPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEALDDVGRIHIVDFDIGFG 484
+ D+I +YK ++ P +F + T NQA+LEA + +IHIVDF I G
Sbjct: 277 --SSSSSSTEDLIL---SYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQG 336
Query: 485 AQWASFMQELSLRNQG--ASLKITAFASPSTHHPIELGLMR--ENLTQFANDIGISFEFD 544
QW + +Q L+ R G ++++ +PS E L+ L FA + ++F+F
Sbjct: 337 IQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFI 396
Query: 545 MI--NFDSLNQNSFSLPFSRANENEAIAVNFPL---CSTSNQPALLPSLLRFIKQLSPKL 604
I LN +SF R + +E +AVNF L P ++ + LR K L+P++
Sbjct: 397 PILTPIHLLNGSSF-----RVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRV 456
Query: 605 VVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDA-INMNSDAVNKIERFLLQPRI---- 664
V + + + F + ALQ Y + ESL+ + +S+ ++ER L RI
Sbjct: 457 VTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLI 516
Query: 665 --ESTVLGRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFH--VEKR 724
E T + R R E+ W+ L +AGF V SN+ +QA+ + + + VE +
Sbjct: 517 GPEKTGIHRERMEEK-EQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESK 576
Query: 725 QASLVLCWQRRELISASAWR 727
+ L W L++ S+WR
Sbjct: 577 PGFISLAWNDLPLLTLSSWR 584
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O81316 | 7.2e-101 | 54.35 | Scarecrow-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SCL6 PE=1 SV=1 | [more] |
Q7XJM8 | 2.2e-97 | 37.23 | Scarecrow-like protein 27 OS=Arabidopsis thaliana OX=3702 GN=SCL27 PE=2 SV=1 | [more] |
Q9M000 | 8.8e-91 | 37.02 | Scarecrow-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=SCL22 PE=1 SV=1 | [more] |
O23210 | 2.1e-52 | 35.85 | Scarecrow-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SCL15 PE=1 SV=3 | [more] |
A0A0M4FMK2 | 3.8e-33 | 25.82 | GRAS family protein RAM1 OS=Petunia hybrida OX=4102 GN=RAM1 PE=2 SV=1 | [more] |