Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTTTTGATTTTGGTAATCCTTGTTAGTTGATTTCTCGTTGCTTGATTGGAGAGGTTTCAGAGTAGACGGATCTTGCTCGTTTTAGGGTTGGATGTATTGGATTAGAGCTTGCGTAGTTGGGGGAAGTGGTATTGAGGTGCATTTGATCGATTAGGGCTGGATCTCTCGGTCTATGTTGCGGCTTTAGCTGTAATCGAATTGGTTGAGGTGAGAATTCGGATTTGTTCTTCGGGTTTGGTGTGAATTTGGGGGGGCGTATTTAGGGTTTAAAAGATGGCTCCCAATCCTCCTCCATTTCAGGTGGAGGATCAAACAGATGAAGAATTCTTTGATAAATTGGTGGAAGATGAGTATGTGGAGGGCGATGATTCAGGATCCAAATTCCTCGATGGAAATGATTCTGACGATGCCAAGGCATTTTCTAATCTGAGTATGAATGATGCAGACAATACATTCAAGGATTCTGGTGGTGTTGGTGACCATGGGCATGAAGCCATAGGGGAGAAGGGCTTCGTGGAGGCTGATCCAGGGGCATTGGGAGCACATGCAGAAGAGAAGGCTTCTTTGGTTTCTTCTAATTCTGTAGGGGCTAATGATGATTTTGGATCAGAGTCAACCTCCGATTCGTTGGCGGGCAAGAGCGGTGAATCTGGTGGTCCGGCCATAAAGGAGGTAGGATGGAGTTCGTTTCATGCTGGTTCATCGCAAAATTGGGGGCAGGGGTTTGGATCATATTCGGATTTTTTCAATGATTTAGGTAACAATGACGCAGGGCCTCTCAGTGGGTCCTTGGAGAATAATTTGAATGGTGAAACGATGGTTAAATCTAGTGCAGAAGAGAACCATGCAAATAACTCTGTTAATTATGTGCCGTATCAAAATGATCATCAAGTTTTTGAAGGATCCACAGATCAAAATCATCATCAAGTTTTTGAAGGATCCACAGATCAAAATCATCATCAAGTTTATGAAGGATCCACAGATCAAGTTTCGGCTGAGAATGATTTAAGTAGCAGTCAGCAGTGGGAAGATCTCTATCCAGGGTGGAAATATGATTCGGTTTCGGGACAATGGTATCAAGTAGAGAACTCTGTTGCAGCGGCGAACGTCCAAGCTATCTTTGATAGTAATTTGAACGGCGAATGGCCTGATGTTTCTGCCACAAAAACAGAGGTGGTGTATTTACAAACTGCTCAGTCTGTTGTTGGCACTGTAACTGAGACTAGCACGACAGATGGTGTTGCTAACTTTAATCATGTATCACAAGGAAATACTCGGTACCCTGAACATATGTATTTCGATCCTCAATACCCCGGTTGGTATTATGACACAATTTCTCAAGTATGGTGCTCCTTGGAATCCTATAATTCATCAATTAAAACAACTAATGAAGCTCCGCATAATCAAAACGAGCATGTATCAGCTTATAGCTATAATTATGGCAACAGTAGTATGTATGGTGATAATGTGCAGCCTAACGAATATGGATCGAGCGATGTGAATAATCAAGGCCTAGATGACAAATTGATAGGGTCTCACCATAATGAAAATCAACAGAGTTTGACTAGCTGGTCAACAGAAAGTGTTTCATCTCAGGCTGAGCCAACTTTTGGTGGAAAGCAGCTAGTGGATACGTCTTCAAGTCCTGATTTTTCTGTAAGAAATGAGCAGCAGAAGTCTATTAGTTCTTATGGAACAGTTCCATCATATTTCCAACCAAGTCAGGGTCGTAGTGACGTCAATGGACCTACCAGCTTAAATAGCTTCCCCTCAACTATGGATTATGGTCATCAGGTTCATCAGGAAAATTCGAAGGAACATGAACATGTGTCTCTATCGAGTGACTATTATAGCAATCAGAAACAGGTGACTAATATTCAACAATCTTTTCACGGAGGTCATCAGTCTTCTTATGCTTCAAATGTTGGAAGATCTTCTGCTGGACGTCCTCCACATGCATTGGTAACATTTGGATTTGGAGGTAAACTTGTTGTGGTGAAAGAAAGCAGCTCGTTTGGAAACTCAACTTATGGTAGTCAGGTTAGGACACCCTTTTTATCTGTCTGTTTCCCTCTTGTTGCATATAGGCTAATAGGCAGGAAAATACTCTGTTGCAGGTGTTGGCTTTAATATTTTACTTGTCGATACATATACCACAATCAAAATAATCATGTCCCGCTGTGTGCTTCTTCAAATTAAAAATATTTCAAGATATATTCATTCGGATGCATCGAGTCTACTCTGATCTGTCATCTTTGTTACTTGTGAAGGATCCTGTTGGAGGCACAATTTCTGTCCTGAACATGATGGAAGTTGTCATGGGTAACACTAATGCCAACGCTATTGGCAATGATGTTGGTGCAAGCGATTACTTCAGTGCTCTCTGCCAACATTCCTTTCCTGGTCCATTAGTTGGTGGAAGTGTGGGGAATAAAGAGTTGCAGAAATGGATTGATGAAAGGATTGCAAATTGTGAATCATTAGGAATGGATTACAGAAAAGGCGAAGCATTGAGGCTGCTTCTTAATTTGCTTAAGATATGCCATCAGCATTACGGGAAACTTCGATCACCATTTGGCACTGACACTGTGTTGGGGGTAACTTACTCCCCCCATAGAATATAAATGTGTTTGACATTATGGCCAACTCTTATCTTTATATTTTTACATTTAAATTTACATTGTTGACATTATGGCCAAATGAGGAGTTGAGATATCTCTCCGAGAGGACGGCCATGGAGTTAATAAAAACTCATCTAATTGGAGTAGCCAACACAAGCTTTTTTGTGATTACTCCACATTCCTTATTAGTTTAGATTGGAAGGTCTACTTGTAATTCTGTTGGGGAAGGGACTCCTGCTCCCTTTGCCCACCAGGGTGTTTTCTTTTGCCTGTTTTGGAAGCTTTTTCTTATCCAATAGATCGCTTGTAGGAGATATATTCTTAAGTATGACTAGTGTCATTCATGTACGTGTTACACTGATTATTGTGGCTTTGGAGATTTCTTGTGGTGTGTTGGGCCAATTTACTCCTAATATATTATTTAACACTATCTAATTCCGAGTTTTTTCTGCATCTTATTCAGAGTCCTCACGTAGCTTTCGATATCTATTGCTCTTGCTTCCAAAGAGCTTTCTCTCCTGCCAATATGTGTGTGTGCAAATGATTGATTTAAAAGAGCAGTGTGTGAAGAAGTATATATTTAATTATTGTTTCAATTAAAAGTCAATTTTTTAGAAGAGAAACAATTTAATTGATAAATGAAAAATTCAAATTACTTGTCCAGTTCTCTTTCTCGTAGTTTAATTATTGAACCTTTGGTTTGTTACAACTTATTGTTGCACCGTTCTGAGCTATCCTTACACTATGCCCATGGGCAATGTTCCAACTCTGTTCATTATGAACACTTCAACTACATTTCTTCCTAATTTATACTTGTATTTTTTTATCAGGAAAGTGATAATCCAGAATCAGCAGTTGCCAATCTTTTTGCTTCTGCCAAGGAGAATGGTGTGCAATTCAATAATTATCATTCGCTTAGTCACTGCTTGCAAATATTGCCTTCTGAAGGACAAATACAGGTATTAATTGATAATTCTCCATTCTAAAGCAAATACATGATAACGAGATTGAAACAAGAGTAAATCATTAGCTTCTGGGTGATGTAACATTTTCTTGGTGCATGTTCTAGGCAACTGCTTCTGAGGTTCAAAGTCATCTAGTATCTGGTAGAAAAAAAGAGGCTTTACAATGTGCACAAGAGGGTCAGTTATGGGGACCTGCCCTTGTTCTTGCTTCACAACTTGGCAACCAGGTTAGTTTGTTGTGTTTTTATTTATTTATTTATTTATTTTTCCTGTTGGGTTTTATCTTTGCTAACAATCCTTCTTAGATTATGTCTTGGATTCTCAAATGCATATATTTGGTGAAAACTCCTTATATTTGAAGTCTTATTTATGTATAGCGTGCATTTTGAATTTTGCAGTTTTACATTGATACTGTAAAGCAAATGGCTCTTGAGCAATTGGTACCTGGATCGCCTTTGCGGACACTATGCCTGCTTATAGCTGGGCAACCAGCAGAAGTCTTTTCTACAGTTTCGACGCCTAACATCAATCCTCTGGGTGGTAGCATGGCTCAAAACTCTTCACAGGTGATGTAGGGTTGAGATGCGTCTTAAAAATATATCCTGTATTGCTGTATGCCTTATCCCTTAACTCAACTATGGTGCTACAATGGATAGTATTTTCTTTTCCTTAATGAAATGGAAACCAACTCTGTAATGGGAGAGCAGTGAAGATCAGCTTTTCTTAATTTTTCAGGATATGTGATGTTTTATTTATTTATTATTATTCGGGTATTTGTCCCTTACGAAGCTCATGTGTTGTTCTGTGTGTCATATTCACAGTTTTCTGCTAATAGTATGCTGGATGATTGGGAAGAAAATTTAGCAGTGATAACTGCCAACAGGACAAAAGATGATGAACTTGTAATTATTCACCTTGGAGACTCCTTATGGAAGGAAAGGAGTGAGGTTAGATTATTTCTGAAAAATATTTGCGACTGATGTTTCATTGAATGTTTCATAACCTGAATCGGCTGGGCAACATTTTCAGATAACTGCTGCTCACATTTGCTATTTAGTTGCCGAGGCGAACTTTGAGTCATATTCAGACAGTGCTAGACTCTGTCTTATTGGAGCTGATCACTGGAAATTTCCTCGAACCTATGCTAGCCCAGAGGCTATCCAGGTATTCATTAGATATATTCCATGAAGCACAATCAGTCGTACGATTAAGTTTATTGATGTGTGGATACGGGTGTGACATTTATTGGGCATGTATTGAACACTTGTTAATAAAAATGTGCGGATACTTGTAGACATAAAACAAACAATTATCAGGAGTGAGCTAAAAGTATTCAAACTCTTATTTTTTTTAAAAAAATGGAAATAAAATAGAATATAAGACAAAAATGATTGATTTTTGACTTCTTGTATATAGTTAAAAACATGCATTCTACTGTCCACTGTTCTCATATAGGTGCCTTACATTTTTAGAAAATAACCTCTCTTTGTGGTGTTCTTGATCTTTGGATCTAGCATGTGCTGTCTGCTACTTATTGGAAATTTTCCTTTCTTGTGTATCGTACCGATGTTGTTTTACAATTATTTCCAGCAGTCTTCTGTTGTAAGCACTTCTTTCCTTTATTTATTTATTTTTTTAATGATTTACTTCATAAATTCATACAGAATTTACTTGTGTATCTGGACAGAGAACTGAATTATACGAATACTCCAAAGTTCTTGGAAACTCTCAGTTTATCCTTCTACCATTTCAGCCATATAAGCTCATATACGCATACATGTTAGCAGAAGTGGGGAAAGTTTCAGACTCATTGAAGTAAGTGCCTTCACTGGTTTACATTTCTTTTTTCCTTTGGATAAGAATTATACATCAAAAAAGCAAAAAATTATGAAAAAAAGAGAACCTGGATCCTCCTGGATTTATATATTTTGAATAACAATCTCGAGACTGAAAAATGGAAAAAAGTAATAATTTCTTCATTTTCACTTAAAGCGCCTAAGGTCCCCCGAAAGTTGTAACGTTAGCACCCCAAAGAAGAGCATTCATATTGTTTATCTAAGGAATTTTAACATTTTCAAAAGTATATTCCCAAGAATACTATCTATTGTGATTCCTATCATGTTCCAAAAAAACAAAAAAAGAATATCTATTGTGCTGAGTCAGGAAACGATTAAATATTTGAGACCAAAATCAATAAAAATTCTGTACCTGCATCATCTAGTCCTTTGAGAGAGGCCAAATAGACTATCAAGATTTCTTATCCGTATTCGAATGACTTCGGGTTTTTGATGATCTTACAAGATCATGATATTCTGGAATTTGGATCAGGTATTGCCAAGCAGTTTTGAAGTCACTTAAAACTGGTCGTGCACCTGAAGTTGAAACATGGAAGCAGTTGCTGTTTTCTCTTGAGGAGAGGATTAGAGCCCATCAACAGGTATTCATCCTATTTTCTGGGTTTCAGAACTAAAACATTGAGGCAGTTTCAATAAATGTTTATACAATTTGCATATAACCCGTAGGGTGGATACACAGCAAATTTGGCCCCCGCAAAATTAGTCGGAAAACTGCTAAACTTTTTTGACAGTACTGCTCATCGTGTTGTCGGGGGCTTGCCACCTCCTATACCATCAACTTCACATGGCAATATTCATGATAATGAACATTATCATGAGCCAGTGGTCCCGAGAGTATCAACTAGTCAGTCAACAATGGCGATGTCATCCTTAATTCCATCTGCTTCAATGGAGCCCATAAGTGAGCGGACTGCCGATAGCAGTAAGATGACAGTTTCAAGCAGGAGTGTTTCAGAGCCAGATTTTGGAAGAACTCCAAGACAGGTGTGATGTTTGTAATTTTCATTTTTACTCTGTCACGGTTGAAAAAGATATACCAGATCAAGTGATCAATTCTATTATTTGCAACAGAATCAGATCAGTTCTTCAAAGGAATCAATGTCAGCTGATAGTCAAGGCAAAACATCAGATTCAAGAGCATCTCGTTTTACTCGTTTTGGTTTTGGTTCACAATTGCTTCAAAAGACTGTTGGATTAGTCTTGAGACCTCGCCTGGGTCGACAGGTTGTTACTCGCATCAGATTTTTCTAGATTTTCCTCGAAATCTTTGTATTCTTTCAAACGTGTTGCCTATATCTTTTCTATCAGCCACTTATATTTGTTTTTGTTTTTCCGTTGTGTTACTGAAGGCGAAATTGGGTGAGAAGAACAAATTTTATTATGATGAAAAGCTGAAGAGATGGGTTGAGGAAGGTGCCGAGTCTCCAGCAGAAGAGCCAGCCTTACCACCACCTCCCACAACTACAACATTCCAGAATGGTGGAACTGATTACAACTTGAGATCTACACTAAAGAAAGAAGCACCATCCCATGATGGAAATGTGGAGTTTGCAAGTCCCAATCCTATTCCTGCAGAAAATAGTTCCGGAATCCCCCCTATCCCGCCAAGTTCAAACCAATTCTCAGCTCGTGGACGGATGGGTGTTCGTTCAAGGTACTACATCAAATGTTTAATTCGTGTGTCATCAGTGAAACATATGTTTCCTCGTTGCAACATTCAGTGAAACTCAAGCTGTCTTATTTGATTTTGTTAGGTATGTTGACACCTTCAACCAAGGGAGTGGGAGCTCAGCAAACTTGTTTCAGTCACCTTCCGTTCAATCAATTAAGCCGAAGGTTGCTGCCAGTGCGAAATTCTTTGTTCCAAGTCCCGCATTGCCAACCGAACCGACAGAGGAGACTATACCGGAATCCTGTCATGAAGACACTACAACCATTGAACATCCTTCAACATCCACCACAAACGATTCATTTTCTAGTCCCTCATCAACTATGCCTATGCAAAGGTTCCCTAGCTTGGGAAACATCTCAGTCAAGGGTGCAAATAAAAGTGTCAATGGGCCCTTTGGAGCAGAAAACTCCCGACGAACTGCATCATGGAGCGGTGCAAACTTCAGTGATGCCTTAAGCCCCCCTCATAAACCAACGGGGCTTAAACCTCTCGGCGAAGAATTGGGTATGCCCCCATCCTCTTTTATGCCTAGCGAACAACCACCACCACCTTTTGTCCAAGCACCAATTAATGGCGGTGGTGGCATGGGAGATGACCTCCATGAGGTGGAACTTTAAGTAGTTAACATGTAAATACTAAGTTTTGTTCCTTAGTTGACCCACACAGATACTCGAATACAATCGTCGCGCCTGCATCTCTCCAGCATAAAAAGATCGGTCGTCGTATGCACCAGAATATAGAGTTCATCAAAGCAAGTCCTCAGCAAGTATGTGCCGTTTTTGTTTTCTCTGAAATCTCTTTGTTCCCAACCCTGAAATTTGTGAACACAAATATAGTCCACAATCATCTCTATATGCTTATATGCTTTAGATGTGAGTTGATTTTATTCTCCTAGGAGTTACCAATGTATGATACTTCTGGAGCTGGTATTTTACATTAAAAGCAAAGACAGAAGGCCTTTGTTGGCACCATTGTACAGCTCTTTTGTTTATTAACCCCCGTCCGCCCACCCGCCCCTCCCGTTTTTCAGAGACTAGAAAATGGCCCTTAAGGTGCTTCAAATTTGAACATCATCAAGATGGAAAAGTGTACTGAATTGTGAAGAATAAGACGATTTGTTCCTTGTGATTGCAATTTGCTTTTAGATGTGGATGTGAGGCTTGGAGTATTCTTAAAACATTTTACCTTATAGTGGCAACGAGGGGGTTGCCACGACCGTGGAAGCCATGTTTGCAGTGGAGGAGTGCGTTGAG
mRNA sequence
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTTTTGATTTTGGTAATCCTTGTTAGTTGATTTCTCGTTGCTTGATTGGAGAGGTTTCAGAGTAGACGGATCTTGCTCGTTTTAGGGTTGGATGTATTGGATTAGAGCTTGCGTAGTTGGGGGAAGTGGTATTGAGGTGCATTTGATCGATTAGGGCTGGATCTCTCGGTCTATGTTGCGGCTTTAGCTGTAATCGAATTGGTTGAGGTGAGAATTCGGATTTGTTCTTCGGGTTTGGTGTGAATTTGGGGGGGCGTATTTAGGGTTTAAAAGATGGCTCCCAATCCTCCTCCATTTCAGGTGGAGGATCAAACAGATGAAGAATTCTTTGATAAATTGGTGGAAGATGAGTATGTGGAGGGCGATGATTCAGGATCCAAATTCCTCGATGGAAATGATTCTGACGATGCCAAGGCATTTTCTAATCTGAGTATGAATGATGCAGACAATACATTCAAGGATTCTGGTGGTGTTGGTGACCATGGGCATGAAGCCATAGGGGAGAAGGGCTTCGTGGAGGCTGATCCAGGGGCATTGGGAGCACATGCAGAAGAGAAGGCTTCTTTGGTTTCTTCTAATTCTGTAGGGGCTAATGATGATTTTGGATCAGAGTCAACCTCCGATTCGTTGGCGGGCAAGAGCGGTGAATCTGGTGGTCCGGCCATAAAGGAGGTAGGATGGAGTTCGTTTCATGCTGGTTCATCGCAAAATTGGGGGCAGGGGTTTGGATCATATTCGGATTTTTTCAATGATTTAGGTAACAATGACGCAGGGCCTCTCAGTGGGTCCTTGGAGAATAATTTGAATGGTGAAACGATGGTTAAATCTAGTGCAGAAGAGAACCATGCAAATAACTCTGTTAATTATGTGCCGTATCAAAATGATCATCAAGTTTTTGAAGGATCCACAGATCAAAATCATCATCAAGTTTTTGAAGGATCCACAGATCAAAATCATCATCAAGTTTATGAAGGATCCACAGATCAAGTTTCGGCTGAGAATGATTTAAGTAGCAGTCAGCAGTGGGAAGATCTCTATCCAGGGTGGAAATATGATTCGGTTTCGGGACAATGGTATCAAGTAGAGAACTCTGTTGCAGCGGCGAACGTCCAAGCTATCTTTGATAGTAATTTGAACGGCGAATGGCCTGATGTTTCTGCCACAAAAACAGAGGTGGTGTATTTACAAACTGCTCAGTCTGTTGTTGGCACTGTAACTGAGACTAGCACGACAGATGGTGTTGCTAACTTTAATCATGTATCACAAGGAAATACTCGGTACCCTGAACATATGTATTTCGATCCTCAATACCCCGGTTGGTATTATGACACAATTTCTCAAGTATGGTGCTCCTTGGAATCCTATAATTCATCAATTAAAACAACTAATGAAGCTCCGCATAATCAAAACGAGCATGTATCAGCTTATAGCTATAATTATGGCAACAGTAGTATGTATGGTGATAATGTGCAGCCTAACGAATATGGATCGAGCGATGTGAATAATCAAGGCCTAGATGACAAATTGATAGGGTCTCACCATAATGAAAATCAACAGAGTTTGACTAGCTGGTCAACAGAAAGTGTTTCATCTCAGGCTGAGCCAACTTTTGGTGGAAAGCAGCTAGTGGATACGTCTTCAAGTCCTGATTTTTCTGTAAGAAATGAGCAGCAGAAGTCTATTAGTTCTTATGGAACAGTTCCATCATATTTCCAACCAAGTCAGGGTCGTAGTGACGTCAATGGACCTACCAGCTTAAATAGCTTCCCCTCAACTATGGATTATGGTCATCAGGTTCATCAGGAAAATTCGAAGGAACATGAACATGTGTCTCTATCGAGTGACTATTATAGCAATCAGAAACAGGTGACTAATATTCAACAATCTTTTCACGGAGGTCATCAGTCTTCTTATGCTTCAAATGTTGGAAGATCTTCTGCTGGACGTCCTCCACATGCATTGGTAACATTTGGATTTGGAGGTAAACTTGTTGTGGTGAAAGAAAGCAGCTCGTTTGGAAACTCAACTTATGGTAGTCAGGATCCTGTTGGAGGCACAATTTCTGTCCTGAACATGATGGAAGTTGTCATGGGTAACACTAATGCCAACGCTATTGGCAATGATGTTGGTGCAAGCGATTACTTCAGTGCTCTCTGCCAACATTCCTTTCCTGGTCCATTAGTTGGTGGAAGTGTGGGGAATAAAGAGTTGCAGAAATGGATTGATGAAAGGATTGCAAATTGTGAATCATTAGGAATGGATTACAGAAAAGGCGAAGCATTGAGGCTGCTTCTTAATTTGCTTAAGATATGCCATCAGCATTACGGGAAACTTCGATCACCATTTGGCACTGACACTGTGTTGGGGGAAAGTGATAATCCAGAATCAGCAGTTGCCAATCTTTTTGCTTCTGCCAAGGAGAATGGTGTGCAATTCAATAATTATCATTCGCTTAGTCACTGCTTGCAAATATTGCCTTCTGAAGGACAAATACAGGCAACTGCTTCTGAGGTTCAAAGTCATCTAGTATCTGGTAGAAAAAAAGAGGCTTTACAATGTGCACAAGAGGGTCAGTTATGGGGACCTGCCCTTGTTCTTGCTTCACAACTTGGCAACCAGTTTTACATTGATACTGTAAAGCAAATGGCTCTTGAGCAATTGGTACCTGGATCGCCTTTGCGGACACTATGCCTGCTTATAGCTGGGCAACCAGCAGAAGTCTTTTCTACAGTTTCGACGCCTAACATCAATCCTCTGGGTGGTAGCATGGCTCAAAACTCTTCACAGTTTTCTGCTAATAGTATGCTGGATGATTGGGAAGAAAATTTAGCAGTGATAACTGCCAACAGGACAAAAGATGATGAACTTGTAATTATTCACCTTGGAGACTCCTTATGGAAGGAAAGGAGTGAGATAACTGCTGCTCACATTTGCTATTTAGTTGCCGAGGCGAACTTTGAGTCATATTCAGACAGTGCTAGACTCTGTCTTATTGGAGCTGATCACTGGAAATTTCCTCGAACCTATGCTAGCCCAGAGGCTATCCAGAGAACTGAATTATACGAATACTCCAAAGTTCTTGGAAACTCTCAGTTTATCCTTCTACCATTTCAGCCATATAAGCTCATATACGCATACATGTTAGCAGAAGTGGGGAAAGTTTCAGACTCATTGAAGTATTGCCAAGCAGTTTTGAAGTCACTTAAAACTGGTCGTGCACCTGAAGTTGAAACATGGAAGCAGTTGCTGTTTTCTCTTGAGGAGAGGATTAGAGCCCATCAACAGGGTGGATACACAGCAAATTTGGCCCCCGCAAAATTAGTCGGAAAACTGCTAAACTTTTTTGACAGTACTGCTCATCGTGTTGTCGGGGGCTTGCCACCTCCTATACCATCAACTTCACATGGCAATATTCATGATAATGAACATTATCATGAGCCAGTGGTCCCGAGAGTATCAACTAGTCAGTCAACAATGGCGATGTCATCCTTAATTCCATCTGCTTCAATGGAGCCCATAAGTGAGCGGACTGCCGATAGCAGTAAGATGACAGTTTCAAGCAGGAGTGTTTCAGAGCCAGATTTTGGAAGAACTCCAAGACAGAATCAGATCAGTTCTTCAAAGGAATCAATGTCAGCTGATAGTCAAGGCAAAACATCAGATTCAAGAGCATCTCGTTTTACTCGTTTTGGTTTTGGTTCACAATTGCTTCAAAAGACTGTTGGATTAGTCTTGAGACCTCGCCTGGGTCGACAGGCGAAATTGGGTGAGAAGAACAAATTTTATTATGATGAAAAGCTGAAGAGATGGGTTGAGGAAGGTGCCGAGTCTCCAGCAGAAGAGCCAGCCTTACCACCACCTCCCACAACTACAACATTCCAGAATGGTGGAACTGATTACAACTTGAGATCTACACTAAAGAAAGAAGCACCATCCCATGATGGAAATGTGGAGTTTGCAAGTCCCAATCCTATTCCTGCAGAAAATAGTTCCGGAATCCCCCCTATCCCGCCAAGTTCAAACCAATTCTCAGCTCGTGGACGGATGGGTGTTCGTTCAAGGTATGTTGACACCTTCAACCAAGGGAGTGGGAGCTCAGCAAACTTGTTTCAGTCACCTTCCGTTCAATCAATTAAGCCGAAGGTTGCTGCCAGTGCGAAATTCTTTGTTCCAAGTCCCGCATTGCCAACCGAACCGACAGAGGAGACTATACCGGAATCCTGTCATGAAGACACTACAACCATTGAACATCCTTCAACATCCACCACAAACGATTCATTTTCTAGTCCCTCATCAACTATGCCTATGCAAAGGTTCCCTAGCTTGGGAAACATCTCAGTCAAGGGTGCAAATAAAAGTGTCAATGGGCCCTTTGGAGCAGAAAACTCCCGACGAACTGCATCATGGAGCGGTGCAAACTTCAGTGATGCCTTAAGCCCCCCTCATAAACCAACGGGGCTTAAACCTCTCGGCGAAGAATTGGGTATGCCCCCATCCTCTTTTATGCCTAGCGAACAACCACCACCACCTTTTGTCCAAGCACCAATTAATGGCGGTGGTGGCATGGGAGATGACCTCCATGAGGTGGAACTTTAAGTAGTTAACATGTAAATACTAAGTTTTGTTCCTTAGTTGACCCACACAGATACTCGAATACAATCGTCGCGCCTGCATCTCTCCAGCATAAAAAGATCGGTCGTCGTATGCACCAGAATATAGAGTTCATCAAAGCAAGTCCTCAGCAAGTATGTGCCGTTTTTGTTTTCTCTGAAATCTCTTTGTTCCCAACCCTGAAATTTGTGAACACAAATATAGTCCACAATCATCTCTATATGCTTATATGCTTTAGATGTGAGTTGATTTTATTCTCCTAGGAGTTACCAATGTATGATACTTCTGGAGCTGGTATTTTACATTAAAAGCAAAGACAGAAGGCCTTTGTTGGCACCATTGTACAGCTCTTTTGTTTATTAACCCCCGTCCGCCCACCCGCCCCTCCCGTTTTTCAGAGACTAGAAAATGGCCCTTAAGGTGCTTCAAATTTGAACATCATCAAGATGGAAAAGTGTACTGAATTGTGAAGAATAAGACGATTTGTTCCTTGTGATTGCAATTTGCTTTTAGATGTGGATGTGAGGCTTGGAGTATTCTTAAAACATTTTACCTTATAGTGGCAACGAGGGGGTTGCCACGACCGTGGAAGCCATGTTTGCAGTGGAGGAGTGCGTTGAG
Coding sequence (CDS)
ATGGCTCCCAATCCTCCTCCATTTCAGGTGGAGGATCAAACAGATGAAGAATTCTTTGATAAATTGGTGGAAGATGAGTATGTGGAGGGCGATGATTCAGGATCCAAATTCCTCGATGGAAATGATTCTGACGATGCCAAGGCATTTTCTAATCTGAGTATGAATGATGCAGACAATACATTCAAGGATTCTGGTGGTGTTGGTGACCATGGGCATGAAGCCATAGGGGAGAAGGGCTTCGTGGAGGCTGATCCAGGGGCATTGGGAGCACATGCAGAAGAGAAGGCTTCTTTGGTTTCTTCTAATTCTGTAGGGGCTAATGATGATTTTGGATCAGAGTCAACCTCCGATTCGTTGGCGGGCAAGAGCGGTGAATCTGGTGGTCCGGCCATAAAGGAGGTAGGATGGAGTTCGTTTCATGCTGGTTCATCGCAAAATTGGGGGCAGGGGTTTGGATCATATTCGGATTTTTTCAATGATTTAGGTAACAATGACGCAGGGCCTCTCAGTGGGTCCTTGGAGAATAATTTGAATGGTGAAACGATGGTTAAATCTAGTGCAGAAGAGAACCATGCAAATAACTCTGTTAATTATGTGCCGTATCAAAATGATCATCAAGTTTTTGAAGGATCCACAGATCAAAATCATCATCAAGTTTTTGAAGGATCCACAGATCAAAATCATCATCAAGTTTATGAAGGATCCACAGATCAAGTTTCGGCTGAGAATGATTTAAGTAGCAGTCAGCAGTGGGAAGATCTCTATCCAGGGTGGAAATATGATTCGGTTTCGGGACAATGGTATCAAGTAGAGAACTCTGTTGCAGCGGCGAACGTCCAAGCTATCTTTGATAGTAATTTGAACGGCGAATGGCCTGATGTTTCTGCCACAAAAACAGAGGTGGTGTATTTACAAACTGCTCAGTCTGTTGTTGGCACTGTAACTGAGACTAGCACGACAGATGGTGTTGCTAACTTTAATCATGTATCACAAGGAAATACTCGGTACCCTGAACATATGTATTTCGATCCTCAATACCCCGGTTGGTATTATGACACAATTTCTCAAGTATGGTGCTCCTTGGAATCCTATAATTCATCAATTAAAACAACTAATGAAGCTCCGCATAATCAAAACGAGCATGTATCAGCTTATAGCTATAATTATGGCAACAGTAGTATGTATGGTGATAATGTGCAGCCTAACGAATATGGATCGAGCGATGTGAATAATCAAGGCCTAGATGACAAATTGATAGGGTCTCACCATAATGAAAATCAACAGAGTTTGACTAGCTGGTCAACAGAAAGTGTTTCATCTCAGGCTGAGCCAACTTTTGGTGGAAAGCAGCTAGTGGATACGTCTTCAAGTCCTGATTTTTCTGTAAGAAATGAGCAGCAGAAGTCTATTAGTTCTTATGGAACAGTTCCATCATATTTCCAACCAAGTCAGGGTCGTAGTGACGTCAATGGACCTACCAGCTTAAATAGCTTCCCCTCAACTATGGATTATGGTCATCAGGTTCATCAGGAAAATTCGAAGGAACATGAACATGTGTCTCTATCGAGTGACTATTATAGCAATCAGAAACAGGTGACTAATATTCAACAATCTTTTCACGGAGGTCATCAGTCTTCTTATGCTTCAAATGTTGGAAGATCTTCTGCTGGACGTCCTCCACATGCATTGGTAACATTTGGATTTGGAGGTAAACTTGTTGTGGTGAAAGAAAGCAGCTCGTTTGGAAACTCAACTTATGGTAGTCAGGATCCTGTTGGAGGCACAATTTCTGTCCTGAACATGATGGAAGTTGTCATGGGTAACACTAATGCCAACGCTATTGGCAATGATGTTGGTGCAAGCGATTACTTCAGTGCTCTCTGCCAACATTCCTTTCCTGGTCCATTAGTTGGTGGAAGTGTGGGGAATAAAGAGTTGCAGAAATGGATTGATGAAAGGATTGCAAATTGTGAATCATTAGGAATGGATTACAGAAAAGGCGAAGCATTGAGGCTGCTTCTTAATTTGCTTAAGATATGCCATCAGCATTACGGGAAACTTCGATCACCATTTGGCACTGACACTGTGTTGGGGGAAAGTGATAATCCAGAATCAGCAGTTGCCAATCTTTTTGCTTCTGCCAAGGAGAATGGTGTGCAATTCAATAATTATCATTCGCTTAGTCACTGCTTGCAAATATTGCCTTCTGAAGGACAAATACAGGCAACTGCTTCTGAGGTTCAAAGTCATCTAGTATCTGGTAGAAAAAAAGAGGCTTTACAATGTGCACAAGAGGGTCAGTTATGGGGACCTGCCCTTGTTCTTGCTTCACAACTTGGCAACCAGTTTTACATTGATACTGTAAAGCAAATGGCTCTTGAGCAATTGGTACCTGGATCGCCTTTGCGGACACTATGCCTGCTTATAGCTGGGCAACCAGCAGAAGTCTTTTCTACAGTTTCGACGCCTAACATCAATCCTCTGGGTGGTAGCATGGCTCAAAACTCTTCACAGTTTTCTGCTAATAGTATGCTGGATGATTGGGAAGAAAATTTAGCAGTGATAACTGCCAACAGGACAAAAGATGATGAACTTGTAATTATTCACCTTGGAGACTCCTTATGGAAGGAAAGGAGTGAGATAACTGCTGCTCACATTTGCTATTTAGTTGCCGAGGCGAACTTTGAGTCATATTCAGACAGTGCTAGACTCTGTCTTATTGGAGCTGATCACTGGAAATTTCCTCGAACCTATGCTAGCCCAGAGGCTATCCAGAGAACTGAATTATACGAATACTCCAAAGTTCTTGGAAACTCTCAGTTTATCCTTCTACCATTTCAGCCATATAAGCTCATATACGCATACATGTTAGCAGAAGTGGGGAAAGTTTCAGACTCATTGAAGTATTGCCAAGCAGTTTTGAAGTCACTTAAAACTGGTCGTGCACCTGAAGTTGAAACATGGAAGCAGTTGCTGTTTTCTCTTGAGGAGAGGATTAGAGCCCATCAACAGGGTGGATACACAGCAAATTTGGCCCCCGCAAAATTAGTCGGAAAACTGCTAAACTTTTTTGACAGTACTGCTCATCGTGTTGTCGGGGGCTTGCCACCTCCTATACCATCAACTTCACATGGCAATATTCATGATAATGAACATTATCATGAGCCAGTGGTCCCGAGAGTATCAACTAGTCAGTCAACAATGGCGATGTCATCCTTAATTCCATCTGCTTCAATGGAGCCCATAAGTGAGCGGACTGCCGATAGCAGTAAGATGACAGTTTCAAGCAGGAGTGTTTCAGAGCCAGATTTTGGAAGAACTCCAAGACAGAATCAGATCAGTTCTTCAAAGGAATCAATGTCAGCTGATAGTCAAGGCAAAACATCAGATTCAAGAGCATCTCGTTTTACTCGTTTTGGTTTTGGTTCACAATTGCTTCAAAAGACTGTTGGATTAGTCTTGAGACCTCGCCTGGGTCGACAGGCGAAATTGGGTGAGAAGAACAAATTTTATTATGATGAAAAGCTGAAGAGATGGGTTGAGGAAGGTGCCGAGTCTCCAGCAGAAGAGCCAGCCTTACCACCACCTCCCACAACTACAACATTCCAGAATGGTGGAACTGATTACAACTTGAGATCTACACTAAAGAAAGAAGCACCATCCCATGATGGAAATGTGGAGTTTGCAAGTCCCAATCCTATTCCTGCAGAAAATAGTTCCGGAATCCCCCCTATCCCGCCAAGTTCAAACCAATTCTCAGCTCGTGGACGGATGGGTGTTCGTTCAAGGTATGTTGACACCTTCAACCAAGGGAGTGGGAGCTCAGCAAACTTGTTTCAGTCACCTTCCGTTCAATCAATTAAGCCGAAGGTTGCTGCCAGTGCGAAATTCTTTGTTCCAAGTCCCGCATTGCCAACCGAACCGACAGAGGAGACTATACCGGAATCCTGTCATGAAGACACTACAACCATTGAACATCCTTCAACATCCACCACAAACGATTCATTTTCTAGTCCCTCATCAACTATGCCTATGCAAAGGTTCCCTAGCTTGGGAAACATCTCAGTCAAGGGTGCAAATAAAAGTGTCAATGGGCCCTTTGGAGCAGAAAACTCCCGACGAACTGCATCATGGAGCGGTGCAAACTTCAGTGATGCCTTAAGCCCCCCTCATAAACCAACGGGGCTTAAACCTCTCGGCGAAGAATTGGGTATGCCCCCATCCTCTTTTATGCCTAGCGAACAACCACCACCACCTTTTGTCCAAGCACCAATTAATGGCGGTGGTGGCATGGGAGATGACCTCCATGAGGTGGAACTTTAA
Protein sequence
MAPNPPPFQVEDQTDEEFFDKLVEDEYVEGDDSGSKFLDGNDSDDAKAFSNLSMNDADNTFKDSGGVGDHGHEAIGEKGFVEADPGALGAHAEEKASLVSSNSVGANDDFGSESTSDSLAGKSGESGGPAIKEVGWSSFHAGSSQNWGQGFGSYSDFFNDLGNNDAGPLSGSLENNLNGETMVKSSAEENHANNSVNYVPYQNDHQVFEGSTDQNHHQVFEGSTDQNHHQVYEGSTDQVSAENDLSSSQQWEDLYPGWKYDSVSGQWYQVENSVAAANVQAIFDSNLNGEWPDVSATKTEVVYLQTAQSVVGTVTETSTTDGVANFNHVSQGNTRYPEHMYFDPQYPGWYYDTISQVWCSLESYNSSIKTTNEAPHNQNEHVSAYSYNYGNSSMYGDNVQPNEYGSSDVNNQGLDDKLIGSHHNENQQSLTSWSTESVSSQAEPTFGGKQLVDTSSSPDFSVRNEQQKSISSYGTVPSYFQPSQGRSDVNGPTSLNSFPSTMDYGHQVHQENSKEHEHVSLSSDYYSNQKQVTNIQQSFHGGHQSSYASNVGRSSAGRPPHALVTFGFGGKLVVVKESSSFGNSTYGSQDPVGGTISVLNMMEVVMGNTNANAIGNDVGASDYFSALCQHSFPGPLVGGSVGNKELQKWIDERIANCESLGMDYRKGEALRLLLNLLKICHQHYGKLRSPFGTDTVLGESDNPESAVANLFASAKENGVQFNNYHSLSHCLQILPSEGQIQATASEVQSHLVSGRKKEALQCAQEGQLWGPALVLASQLGNQFYIDTVKQMALEQLVPGSPLRTLCLLIAGQPAEVFSTVSTPNINPLGGSMAQNSSQFSANSMLDDWEENLAVITANRTKDDELVIIHLGDSLWKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQAVLKSLKTGRAPEVETWKQLLFSLEERIRAHQQGGYTANLAPAKLVGKLLNFFDSTAHRVVGGLPPPIPSTSHGNIHDNEHYHEPVVPRVSTSQSTMAMSSLIPSASMEPISERTADSSKMTVSSRSVSEPDFGRTPRQNQISSSKESMSADSQGKTSDSRASRFTRFGFGSQLLQKTVGLVLRPRLGRQAKLGEKNKFYYDEKLKRWVEEGAESPAEEPALPPPPTTTTFQNGGTDYNLRSTLKKEAPSHDGNVEFASPNPIPAENSSGIPPIPPSSNQFSARGRMGVRSRYVDTFNQGSGSSANLFQSPSVQSIKPKVAASAKFFVPSPALPTEPTEETIPESCHEDTTTIEHPSTSTTNDSFSSPSSTMPMQRFPSLGNISVKGANKSVNGPFGAENSRRTASWSGANFSDALSPPHKPTGLKPLGEELGMPPSSFMPSEQPPPPFVQAPINGGGGMGDDLHEVEL
Homology
BLAST of CmaCh16G011350 vs. ExPASy Swiss-Prot
Match:
Q9FGK8 (Protein transport protein SEC16B homolog OS=Arabidopsis thaliana OX=3702 GN=SEC16B PE=1 SV=1)
HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 709/1443 (49.13%), Postives = 904/1443 (62.65%), Query Frame = 0
Query: 8 FQVEDQTDEEFFDKLVEDEY--VEGDDSGS----KFLDGNDSDDAKAFSNLSMNDADNTF 67
F +EDQTDE+FFDKLV+D Y E S S KF D +DSDD +AFSNLS+
Sbjct: 7 FLLEDQTDEDFFDKLVDDAYSPTEAQASSSVTELKFDDESDSDDIRAFSNLSIG------ 66
Query: 68 KDSGGVGDHG-HEAIGEKGFVEADPGALGAHAEEKASLVSSNSVG---------ANDDFG 127
KD G GD +EAI G A+ GA G+ E++ S ++ +V +D+
Sbjct: 67 KDPLGGGDGTLNEAI--LGNDVANEGASGSVGEDEPSSIAPEAVQFPHSDARELRDDEMR 126
Query: 128 SESTSDSLAGKS------GESGGPAIKEVGWSSFHAGSSQNWGQGFGSYSDFFNDLGNND 187
SE L+ + E G P +KE+ W SF A S N G+GFGSYSDFF +L
Sbjct: 127 SEVADMPLSETAKECTIVNEPGIPGVKELDWGSFDADLSVNDGRGFGSYSDFFTEL---- 186
Query: 188 AGPLSGSLENNLNGETMVKSSAEENHANNSVNYVPYQNDHQVFEGSTDQNHHQVFEGSTD 247
+ NL G+ V + N N N N FE Q HH G
Sbjct: 187 -----DATAGNLQGKADVAVATGGNLVANDTN-----NTSVGFEQHQGQLHHDSASGQYV 246
Query: 248 QNHHQVYEGSTDQVSAENDLSSSQQWEDLYPGWKYDSVSGQWYQVENSVAAANVQAIFDS 307
N SQ WE+LYPGWKYD+ +GQW+QV+ A+ N Q ++
Sbjct: 247 DN--------------------SQSWENLYPGWKYDASTGQWFQVDGHDASMNSQESYE- 306
Query: 308 NLNGEWPDVSATKTEVVYLQ--TAQSVVGTVTETSTTDGVANFNHVSQGNTRYPEHMYFD 367
N W +V+A ++V Y + TA +V GTV ST +N VSQ + YPEHM FD
Sbjct: 307 NSTSNWENVAANNSDVAYQRQSTASAVAGTVENVST------WNQVSQVSNGYPEHMVFD 366
Query: 368 PQYPGWYYDTISQVWCSLESYNSSIKTTNEAPHNQNEHVSAY-SYNYGNSSMYGDNVQPN 427
QYPGWYYDTI+Q W SL+SYN + +TT +A Q ++ +++ + ++ S D N
Sbjct: 367 SQYPGWYYDTIAQEWRSLDSYNQAFQTTGQANDQQVQNGNSFTAVDHSRESNVHDVYDKN 426
Query: 428 EY---GSSDVNNQ-GLDDKLIGSHHNENQQSLTSWSTESVSSQAEPTFGGKQLVDTSSSP 487
+ D+ +Q G D+ S++++NQQ+ W E+ G + T +S
Sbjct: 427 QILRTQKFDIQSQHGSWDQ---SYYDKNQQATNMWQPENA--------GAAEAAVTPASL 486
Query: 488 DFSVRNEQQKSISSYGTVPSYFQPSQGRSDVNGPTSLNSF-PSTMDYGHQVHQENSKEHE 547
S N+Q ++ S G V F+P + + + SF P M+ N ++
Sbjct: 487 SNSGGNQQVNNLYSTGPVAEQFKPYE--------SGVQSFIPQHMNVA------NVTQNG 546
Query: 548 HVSLSSDYYSNQKQVTNIQQSFHGGHQSSYASNVGRSSAGRPPHALVTFGFGGKLVVVK- 607
+S S+ +YS Q+ V + QSF ++ + GRSS GRPPHALV FGFGGKL+++K
Sbjct: 547 PMSFSNGFYSRQESVDDAPQSFQS--SQLFSPSAGRSSDGRPPHALVNFGFGGKLILMKD 606
Query: 608 ESSSFGNSTYGSQDPVGG-TISVLNMMEVVMGNTNANAIGNDVGASDYFSALCQHSFPGP 667
+S S NS++GSQ GG +ISVLN+ EV+ G+ + +++G + + YFS L Q S PGP
Sbjct: 607 DSGSLQNSSFGSQKGTGGSSISVLNLAEVISGSASYSSLGEN--SLSYFSCLDQQSLPGP 666
Query: 668 LVGGSVGNKELQKWIDERIANCESLGMDYRKGEALRLLLNLLKICHQHYGKLRSPFGTDT 727
LVGG+VG+K+L KW+DERI NCES MD+ +G+ L++LL+LL+I Q+YGKLRSPFG+D
Sbjct: 667 LVGGNVGSKDLHKWLDERILNCESSYMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGSDA 726
Query: 728 VLGESDNPESAVANLFASAKENGVQFNNYHSLSHCLQILPSEGQIQATASEVQSHLVSGR 787
+ E+D+ E+AVA LFA AKE+GVQ N Y +S CLQ LP E Q+Q TASEVQ+ L SGR
Sbjct: 727 LQKETDSAEAAVAKLFAIAKEDGVQ-NGYAPISQCLQHLPPESQMQVTASEVQNLLASGR 786
Query: 788 KKEALQCAQEGQLWGPALVLASQLGNQFYIDTVKQMALEQLVPGSPLRTLCLLIAGQPAE 847
K EALQCAQEG LWGPALV+A+QLG QFY+DTVKQMAL QLVPGSPLRTLCLL+AGQPAE
Sbjct: 787 KMEALQCAQEGHLWGPALVIAAQLGQQFYVDTVKQMALRQLVPGSPLRTLCLLVAGQPAE 846
Query: 848 VFSTVSTPNIN-PLGGSMAQNSSQFSANSMLDDWEENLAVITANRTKDDELVIIHLGDSL 907
VFST ST +I+ P ++ QF +SMLD WEENL +ITANRT DDELVI HLGD +
Sbjct: 847 VFSTGSTSDISFPGSVNLPPQQPQFGCSSMLDSWEENLGIITANRTTDDELVITHLGDCM 906
Query: 908 WKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSK 967
WKER EI AAHICYL+A+ NF++YSD+ARLCL+GADHWK+PRTYASPEAIQRTELYEYSK
Sbjct: 907 WKERGEIIAAHICYLIADKNFDTYSDTARLCLVGADHWKYPRTYASPEAIQRTELYEYSK 966
Query: 968 VLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQAVLKSLKTGRAPEVETWKQLLFS 1027
LGNSQ+ LL FQPYK++YA+MLAEVGK+S + KYCQAVLK LKTGR+PEVE WKQ + S
Sbjct: 967 TLGNSQYTLLTFQPYKVMYAHMLAEVGKLSTAQKYCQAVLKCLKTGRSPEVEMWKQFVSS 1026
Query: 1028 LEERIRAHQQGGYTANLAPAKLVGKLLNFFDSTAHRVVGGLPPPIPSTSHGNIHDNEHYH 1087
LEERIR HQQGGYTANL P KLVG LLNFF S HR VGG+PPP P ++ GN+ NE+ H
Sbjct: 1027 LEERIRIHQQGGYTANLHPEKLVGVLLNFFGSKTHRPVGGMPPPAPHSTKGNLQGNEYQH 1086
Query: 1088 -EPVVPRVSTSQSTMAMSSLIPSASMEPISERTADSSKMTVSSRSVSEPDFGRTPRQNQI 1147
+ +++ SQS MSSL+P AS+EP E +M V +RSVSEPDFGRTP Q
Sbjct: 1087 QQQEATKLAYSQSVNTMSSLMPPASVEPTHESGGSGRRMAVHTRSVSEPDFGRTPIQEMA 1146
Query: 1148 SSSKE-SMSADSQGKTSDSRA-SRFTRFGFGSQLLQKTVGLVLRPRLGRQAKLGEKNKFY 1207
SSKE ++ ++ K+S S A SRF+RFGFG + + TVG VL R ++AKLG +N+FY
Sbjct: 1147 DSSKEKAVDGVTKLKSSGSVAGSRFSRFGFG--IFKDTVGRVL-ARSSKEAKLGAENQFY 1206
Query: 1208 YDEKLKRWVEEGAESPAEEPALPPPPTTTTFQNGGTDYNLRSTLKKEAPSHDGNVEFASP 1267
YD+KLKRWVE G E PAEE ALPPPPT FQN Y +S + PS N ++S
Sbjct: 1207 YDDKLKRWVERGVEPPAEEAALPPPPTIGAFQNNSLGYENKSDM---IPS---NGNWSSG 1266
Query: 1268 NPIPAENSSGIPPIPPSSNQFSARGRMGVRSRYVDTFN-QGSGSSANLFQSPSVQSIKPK 1327
P P+ENSSGIPPI SNQFSARGR GVR+RYVDT+N G G+S + SPSVQ+ KP
Sbjct: 1267 GPTPSENSSGIPPISHGSNQFSARGRTGVRARYVDTYNPPGRGNSHTMIPSPSVQTAKPP 1326
Query: 1328 VAASAKFFVPSPALPTEPTEETIPESCHEDTTTIEHPSTSTTNDSFSSPSSTMPMQRFPS 1387
+ A AKFFV PA P + + E +T E + S + P M MQR+PS
Sbjct: 1327 IPAKAKFFV--PAAPASFSNDQAMEPAAAETRQEEISADEVVASSGAPP--PMMMQRYPS 1356
Query: 1388 LGNISVKGANKSVNGP-FGAENSRRTASWSGANFSDALSPPHKPTGLKP---------LG 1404
+ NI G SVNG SRRTASWSG NF+ + +PP P+ KP LG
Sbjct: 1387 MDNIQRNGLGISVNGDNHQPPTSRRTASWSG-NFNTSFTPPTSPSTFKPVLLNSSSSSLG 1356
BLAST of CmaCh16G011350 vs. ExPASy Swiss-Prot
Match:
Q9FGK9 (Protein transport protein SEC16A homolog OS=Arabidopsis thaliana OX=3702 GN=MAG5 PE=1 SV=1)
HSP 1 Score: 1055.8 bits (2729), Expect = 4.3e-307
Identity = 686/1469 (46.70%), Postives = 896/1469 (60.99%), Query Frame = 0
Query: 8 FQVEDQTDEEFFDKLVEDEYVEGDDSGS---KFLDGNDSDDAKAFSNLS-----MNDADN 67
F ++DQTDE+FFDKLV+D Y S + KF DG+DSDDAKAF+NLS + D D
Sbjct: 7 FLLDDQTDEDFFDKLVDDSYTPTASSSAKELKFDDGSDSDDAKAFANLSVVDDVLGDGDV 66
Query: 68 TFKDSGGVGDHGHEAIGEKGFVEADPGALGAHAEEKASLVSSNSVGANDDFGSESTSDSL 127
++G D +E G G V + + + A E V+S++ D S D +
Sbjct: 67 ALNEAGLGNDVANE--GTSGSVGKEEPS-SSIAPEAVQFVNSDANRLRDVDVVRSEVDDM 126
Query: 128 A----GKSGE----SGGPAIKEVGWSSFHAGSSQNWGQGFGSYSDFFNDLGNNDAGPLSG 187
A GK SG P +KEV W SF+A SS N G GFGSYSDFF +L + AG + G
Sbjct: 127 ALTETGKESNIVDGSGSPGVKEVDWGSFYADSSVNDGGGFGSYSDFFTEL-DATAGNVQG 186
Query: 188 SLENNLNGETMVKSSAEENHANNSVNYVPYQNDHQVFEGSTDQNHHQVFEGSTDQNHHQV 247
E + ++ AN+++N ++ FE Q H G N
Sbjct: 187 QAE-------VAVATGGNLVANDTINTSVGLDNSAGFEQHQGQVQHDSGSGQYVDN---- 246
Query: 248 YEGSTDQVSAENDLSSSQQWEDLYPGWKYDSVSGQWYQVENSVAAANVQAIFDSNLNGEW 307
SQ WE+LYPGWKYD+ +GQWYQV+ A N Q + N G W
Sbjct: 247 ----------------SQSWENLYPGWKYDASTGQWYQVDGQDATVNSQESY-INSTGNW 306
Query: 308 PDVSATKTEVVYLQTAQSVVGTVTETSTTDGVANFNHVSQGNTRYPEHMYFDPQYPGWYY 367
V+A ++V YL+ + T T + V+ +N VSQ YPEHM FD QYPGWYY
Sbjct: 307 ESVAADNSDVAYLKQST----TSAMAGTAESVSTWNQVSQVGNGYPEHMVFDAQYPGWYY 366
Query: 368 DTISQVWCSLESYNSSIKTT-NEAPHN---QNEHVSAYSY-NYGNSSMYGDNVQPNEYGS 427
DTI+Q W SL+SYN + +TT H+ QN H +Y N SS+Y N + + +
Sbjct: 367 DTIAQEWRSLDSYNQASQTTVTGQAHDQQVQNGHARTTTYHNNSQSSVYDVNNKNQTFKA 426
Query: 428 SDVNNQGLDDKLIGSHHNENQQSLTSWSTESVSSQAEPTFGGKQLVDTSSSPDFSVRNEQ 487
D QG S++ NQQ+ +W +V +AEP TS S N+Q
Sbjct: 427 QDFAIQGQHGSWDESYYANNQQAGNTWQPVNV-GKAEPAV-------TSDSLSRFGGNQQ 486
Query: 488 QKSISSYGTVPSYFQPSQGRSDVNGPTSLNSFPSTMDYGHQVHQENSKEHEHVSLSSDYY 547
++ S +V F+P+ + P +N +T ++ +S S+D Y
Sbjct: 487 VNNLYSTESVAEQFKPNTIGAQSFIPQHMNVASAT-------------QNGPLSFSNDLY 546
Query: 548 SNQKQVTNIQQSFHGGHQSSYASNVGRSSAGRPPHALVTFGFGGKLVVVKESS-SFGNST 607
+ Q+ V + Q+SF + ++ +VGRSS RPPHALV+FGFGGKL+V+K+++ S N++
Sbjct: 547 NRQQSVDHAQKSFQ--NNQLFSPSVGRSSDRRPPHALVSFGFGGKLIVMKDNNGSLQNTS 606
Query: 608 YGSQDPVGGTISVLNMMEVVMGNTNANAIGNDVGASDYFSALCQHSFPGPLVGGSVGNKE 667
+GSQ G +I+VLN+ EV+ G+ + ++ G D + YF L Q S PGPLVGG+VG+KE
Sbjct: 607 FGSQGIGGSSITVLNLAEVISGSASYSSPGED--SLSYFRCLHQQSLPGPLVGGNVGSKE 666
Query: 668 LQKWIDERIANCESLGMDYRKGEALRLLLNLLKICHQHYGKLRSPFGTDTVLGESDNPES 727
L KWIDER+ +CES MD+ +G+ L++LL+LL+I Q+YGKLRSPFG+D E+D PE+
Sbjct: 667 LHKWIDERLLHCESSNMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGSDASQKETDTPEA 726
Query: 728 AVANLFASAKENGVQFNNYHSLSHCLQILPSEGQIQATASEVQSHLVSGRKKEALQCAQE 787
AVA LFA AK++G+Q N Y +S CLQ LP E Q+Q TASEVQ+ L SGRK EALQCAQE
Sbjct: 727 AVAKLFAFAKKDGIQ-NGYAPISQCLQHLPPESQMQVTASEVQNLLASGRKMEALQCAQE 786
Query: 788 GQLWGPALVLASQLGNQFYIDTVKQMALEQLVPGSPLRTLCLLIAGQPAEVFSTVSTPNI 847
G LWGPALV+A+QLG+QFY+DTVKQMAL QL+PGSPLRTLCLL+AGQPAEV T
Sbjct: 787 GHLWGPALVIAAQLGDQFYVDTVKQMALRQLIPGSPLRTLCLLVAGQPAEVCPT------ 846
Query: 848 NPLGGSMAQNSSQFSANSMLDDWEENLAVITANRTKDDELVIIHLGDSLWKERSEITAAH 907
S++SMLD+WEENL +ITANRT DD+LVIIHLGDS+WKER EI AAH
Sbjct: 847 -------------GSSSSMLDNWEENLGIITANRTTDDDLVIIHLGDSMWKERGEIIAAH 906
Query: 908 ICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILLP 967
ICYL+A+ NF+ YS+SARLCL+GADHWK PRTYASP+AIQRTELYEYSK LGNSQ+ILLP
Sbjct: 907 ICYLIADKNFDPYSESARLCLVGADHWKCPRTYASPDAIQRTELYEYSKTLGNSQYILLP 966
Query: 968 FQPYKLIYAYMLAEVGKVSDSLKYCQAVLKSLKTGRAPEVETWKQLLFSLEERIRAHQQG 1027
FQPYK+IYA+MLAEVGK+S + KYCQAV++ LKT R+ EVE WKQ SLEERIR+HQ+G
Sbjct: 967 FQPYKIIYAHMLAEVGKLSTAQKYCQAVIRCLKTSRSSEVEMWKQFASSLEERIRSHQEG 1026
Query: 1028 GYTANLAPAKLVGKLLNFFDSTAHRVVGGLPPPIPSTSHGNIHDNEHYH-EPVVPRVSTS 1087
G NLAPAKLVGKLLN + G+PPP P ++ GN NE+ H + ++S S
Sbjct: 1027 G---NLAPAKLVGKLLN--------SLWGMPPPAPHSTTGNPQVNEYQHQQQEAAKLSYS 1086
Query: 1088 QSTMAMSSLIPSASMEPISERTADSSKMTVSSRSVSEPDFGRTPRQNQISSSKESMSADS 1147
QS MSSL+P AS+EP+ E + M SRSVSEPDF RTP Q+Q SSK+ + D
Sbjct: 1087 QSANTMSSLMPPASIEPVHEWGGNGRTMAAHSRSVSEPDFSRTPIQDQTDSSKDK-APDG 1146
Query: 1148 QGKTSDSR---ASRFTRFGFGSQLLQKTVGLVLRPRLGRQAKLGEKNKFYYDEKLKRWVE 1207
+ +R +SRF+RFG G +L+ TVG V R +AKLG +N+FYYD+ LKRWVE
Sbjct: 1147 VTQVKSTRKVPSSRFSRFGIG--ILKNTVGKVFPSRSSNEAKLGNENQFYYDDNLKRWVE 1206
Query: 1208 EGAESPAEEPALPPPPTTTTFQNGGTDYNLRSTLKKEAPSHDGNVEFASPNPIPAENSSG 1267
G E PAEE ALPPPPT+ F++ + +S +K E G+ ++S +P P+ENS G
Sbjct: 1207 RGVEPPAEEAALPPPPTSVPFRSNSLGHENKSEIKNEMSPSSGS--WSSGSPTPSENSPG 1266
Query: 1268 IPPIPPSSNQFSARGRMGVRSRYVDTFNQGSGSSANLFQSPSVQSIKPKVAASAKFFVP- 1327
IPP+ SNQFSARGRMGVR+RYVDT+NQGS S ++QSP VQS KP + A AKFFVP
Sbjct: 1267 IPPVSQGSNQFSARGRMGVRARYVDTYNQGSSS---MYQSPPVQSSKPPIPAKAKFFVPA 1326
Query: 1328 SPA------LPTEPTEETIPESCHEDTTTIEHPSTSTTNDSFSSPS-STMPMQRFPSLGN 1387
+PA + + ET E+ ++ + + SF SP+ S + MQRFPS+ N
Sbjct: 1327 APASFANDQVMESVSAETRQENSGDEAVVGSAGAPGPSQASFQSPTPSPIAMQRFPSVDN 1350
Query: 1388 ISVKGANKSVNGPFGAENSRRTASWSGA-NFSDALSPPHKPTGLKPLGEELGMPPSSFMP 1441
I G+ S+NG SRRTASWSG+ N S +SP S+F P
Sbjct: 1387 IRRSGSGTSLNGDLPQSVSRRTASWSGSVNSSSFMSP---------------TSASTFRP 1350
BLAST of CmaCh16G011350 vs. ExPASy Swiss-Prot
Match:
Q6BCB4 (Protein transport protein Sec16B OS=Oryctolagus cuniculus OX=9986 GN=SEC16B PE=2 SV=1)
HSP 1 Score: 145.6 bits (366), Expect = 4.4e-33
Identity = 128/423 (30.26%), Postives = 191/423 (45.15%), Query Frame = 0
Query: 560 PHALVTFGFGGKLVVVKESSSFGNSTYGSQDPVGGTISVLNMMEVVMGNTNANAIGNDVG 619
PH V FG G+LV V SS T + ++ MEV++ ND+
Sbjct: 274 PHVSVGFGPRGQLVCVSPSSPMDGQT---------ALVEVHSMEVIL---------NDLE 333
Query: 620 ASDYFSALCQHSFPGPLVGGSVGNKELQKWIDERIANCESLGMDYRKGEALRLLLNLLKI 679
+ SFPGPL+ V ++ + ++ A G + AL L L+ +
Sbjct: 334 EQEE-----MRSFPGPLIREDVHKVDVMTFCQQKAAQSRKSGTPGGRDSALLWQL-LVLL 393
Query: 680 CHQHYGKLRSPFG----TDTVLGESDNPESAVANLFASAKENGVQFNNYHSLSHCLQILP 739
C Q+ S D E + VANL A E+ ++ + P
Sbjct: 394 CRQNGSMAGSDIAELLLQDCKKLEKYKKQPPVANLINLADEDWPVLSSGPRNLLTGETPP 453
Query: 740 SEGQIQATASEVQSHLVSGRKKEALQCAQEGQLWGPALVLASQLGNQFYIDTVKQMALEQ 799
S + L GRKKEAL+ A + LWG AL L+S++ + Y V
Sbjct: 454 SVETPAQVVGKFTQLLYYGRKKEALEWAMKNHLWGHALFLSSKMEPRTY-KWVMSGFTST 513
Query: 800 LVPGSPLRTLCLLIAGQPAEVFSTVSTPNINPLGGSMAQNSSQFSANSMLDDWEENLAVI 859
L PL+TL L++G+ ++ ++ DW +LAVI
Sbjct: 514 LALNDPLQTLFQLLSGR--------------------IPQAATCCGDTQWGDWRPHLAVI 573
Query: 860 TANRTKDDEL---VIIHLGDSLWKERSEITAAHICYLVAEANFESYSDSA-RLCLIGADH 919
+N+ D EL VI+ +GD+L + + AAH CYL+A+ F Y+ +A RL L+G+ H
Sbjct: 574 LSNQAGDPELRRRVIVSMGDTL-ASKGLVEAAHFCYLMAQVPFGHYTVNADRLALLGSSH 633
Query: 920 -WKFPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYC 974
+FPR +AS EAIQRTE+ EY + LG ++ FQ YKL+YA LA+ G S + YC
Sbjct: 634 SQEFPR-FASAEAIQRTEVLEYCRTLGGRPGLIASFQVYKLLYASRLADYGLASQAFHYC 649
BLAST of CmaCh16G011350 vs. ExPASy Swiss-Prot
Match:
Q96JE7 (Protein transport protein Sec16B OS=Homo sapiens OX=9606 GN=SEC16B PE=1 SV=2)
HSP 1 Score: 139.4 bits (350), Expect = 3.1e-31
Identity = 126/425 (29.65%), Postives = 190/425 (44.71%), Query Frame = 0
Query: 560 PHALVTFGFGGKLVVVKESSSFGNSTYGSQDPVGGTISV--LNMMEVVMGNTNANAIGND 619
PH V+FG GG+LV V G P G ++ L+ MEV++ ++
Sbjct: 278 PHVPVSFGPGGQLVHV-----------GPSSPTDGQAALVELHSMEVILNDSEEQEE--- 337
Query: 620 VGASDYFSALCQHSFPGPLVGGSVGNKELQKWIDERIA-NCESLGMDYRKGEALRLLLNL 679
SF GPL+ V ++ + ++ A +C+S + R L LL L
Sbjct: 338 -----------MRSFSGPLIREDVHKVDIMTFCQQKAAQSCKSETLGSRDSALLWQLLVL 397
Query: 680 LKICHQHYGKLRSPFG----TDTVLGESDNPESAVANLFASAKENGVQFNNYHSLSHCLQ 739
L C Q+ + S D E + VANL E+ ++ +
Sbjct: 398 L--CRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVLSSGTPNLLTGE 457
Query: 740 ILPSEGQIQATASEVQSHLVSGRKKEALQCAQEGQLWGPALVLASQLGNQFYIDTVKQMA 799
I PS + L GRKKEAL+ A + LWG AL L+S++ Q Y V
Sbjct: 458 IPPSVETPAQIVEKFTRLLYYGRKKEALEWAMKNHLWGHALFLSSKMDPQTY-SWVMSGF 517
Query: 800 LEQLVPGSPLRTLCLLIAGQPAEVFSTVSTPNINPLGGSMAQNSSQFSANSMLDDWEENL 859
L PL+TL L++G+ ++ DW +L
Sbjct: 518 TSTLALNDPLQTLFQLMSGR--------------------IPQAATCCGEKQWGDWRPHL 577
Query: 860 AVITANRTKDDEL---VIIHLGDSLWKERSEITAAHICYLVAEANFESYS-DSARLCLIG 919
AVI +N+ D EL I+ +GD+L + + AAH CYL+A F Y+ + L L+G
Sbjct: 578 AVILSNQAGDPELYQRAIVAIGDTL-AGKGLVEAAHFCYLMAHVPFGHYTVKTDHLVLLG 637
Query: 920 ADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLK 974
+ H + +A+ EAIQRTE++EY ++LG + + FQ YKL+YA LA+ G VS +L
Sbjct: 638 SSHSQEFLKFATTEAIQRTEIFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLVSQALH 653
BLAST of CmaCh16G011350 vs. ExPASy Swiss-Prot
Match:
Q75NY9 (Protein transport protein Sec16B OS=Bos taurus OX=9913 GN=SEC16B PE=2 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 8.5e-29
Identity = 125/449 (27.84%), Postives = 193/449 (42.98%), Query Frame = 0
Query: 560 PHALVTFGFGGKLVVVKESSSFGNSTYGSQDPVGGTISVLNMMEVVMGNTNANAIGNDVG 619
PH V+FG GG+LV V SS T + L+ MEV++ ++
Sbjct: 278 PHMPVSFGPGGQLVCVSPSSPSDGQT---------ALVELHSMEVILNDSEEQEE----- 337
Query: 620 ASDYFSALCQHSFPGPLVGGSVGNKELQKWIDERIANCESLGMDYRKGEALRLLLNLLKI 679
+F GPL+ V ++ + ++ A + AL L L+ +
Sbjct: 338 ---------MRTFSGPLIREDVHKVDIMTFCQQKAAQSHKSETPGSRDSALLWQL-LVLL 397
Query: 680 CHQHYGKLRSPFG----TDTVLGESDNPESAVANLFASAKENGVQFNNYHSLSHCLQILP 739
C Q+ + S D E + VANL E+ ++ +ILP
Sbjct: 398 CRQNGSMVGSDIAELLMQDWKKLEKYKRQPPVANLINLTDEDWPVLSSGTRDLLTGEILP 457
Query: 740 SEGQIQATASEVQSHLVSGRKKEALQCAQEGQLWGPALVLASQLGNQFYIDTVKQMALEQ 799
S + L GRKKEAL+ A + LWG AL LAS++ + + V
Sbjct: 458 SVETPAQILEKFTKLLYYGRKKEALEWAMKNHLWGHALFLASKMDPRTH-SRVMSGFTST 517
Query: 800 LVPGSPLRTLCLLIAGQPAEVFSTVSTPNINPLGGSMAQNSSQFSANSMLDDWEENLAVI 859
L PL+TL L++G+ ++ + DW +LAVI
Sbjct: 518 LALNDPLQTLFQLMSGR--------------------IPQAATCCGDKQWGDWRPHLAVI 577
Query: 860 TANRTKDDEL---VIIHLGDSLWKERSEITAAHICYLVAEANFESYS-DSARLCLIGADH 919
+N+ D EL I+ +GD+L + + AAH CYL+A F Y+ + L L+G+ H
Sbjct: 578 LSNQGGDPELYQRTIVAMGDTL-AGKGLVEAAHFCYLMAHVPFGYYTVKTDYLALLGSSH 637
Query: 920 WKFPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQ 979
+ A+ EAIQRTE++EY ++LG + + FQ YKL+YA LA+ G S +L YC+
Sbjct: 638 SQEFLKSATTEAIQRTEIFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLTSQALHYCE 680
Query: 980 AVLKSLKTGRAPEVETWKQLLFSLEERIR 1001
V +L + L L ER++
Sbjct: 698 PVGTALLSHGESSHPVLLVELIKLAERLK 680
BLAST of CmaCh16G011350 vs. TAIR 10
Match:
AT5G47490.1 (RGPR-related )
HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 709/1443 (49.13%), Postives = 904/1443 (62.65%), Query Frame = 0
Query: 8 FQVEDQTDEEFFDKLVEDEY--VEGDDSGS----KFLDGNDSDDAKAFSNLSMNDADNTF 67
F +EDQTDE+FFDKLV+D Y E S S KF D +DSDD +AFSNLS+
Sbjct: 7 FLLEDQTDEDFFDKLVDDAYSPTEAQASSSVTELKFDDESDSDDIRAFSNLSIG------ 66
Query: 68 KDSGGVGDHG-HEAIGEKGFVEADPGALGAHAEEKASLVSSNSVG---------ANDDFG 127
KD G GD +EAI G A+ GA G+ E++ S ++ +V +D+
Sbjct: 67 KDPLGGGDGTLNEAI--LGNDVANEGASGSVGEDEPSSIAPEAVQFPHSDARELRDDEMR 126
Query: 128 SESTSDSLAGKS------GESGGPAIKEVGWSSFHAGSSQNWGQGFGSYSDFFNDLGNND 187
SE L+ + E G P +KE+ W SF A S N G+GFGSYSDFF +L
Sbjct: 127 SEVADMPLSETAKECTIVNEPGIPGVKELDWGSFDADLSVNDGRGFGSYSDFFTEL---- 186
Query: 188 AGPLSGSLENNLNGETMVKSSAEENHANNSVNYVPYQNDHQVFEGSTDQNHHQVFEGSTD 247
+ NL G+ V + N N N N FE Q HH G
Sbjct: 187 -----DATAGNLQGKADVAVATGGNLVANDTN-----NTSVGFEQHQGQLHHDSASGQYV 246
Query: 248 QNHHQVYEGSTDQVSAENDLSSSQQWEDLYPGWKYDSVSGQWYQVENSVAAANVQAIFDS 307
N SQ WE+LYPGWKYD+ +GQW+QV+ A+ N Q ++
Sbjct: 247 DN--------------------SQSWENLYPGWKYDASTGQWFQVDGHDASMNSQESYE- 306
Query: 308 NLNGEWPDVSATKTEVVYLQ--TAQSVVGTVTETSTTDGVANFNHVSQGNTRYPEHMYFD 367
N W +V+A ++V Y + TA +V GTV ST +N VSQ + YPEHM FD
Sbjct: 307 NSTSNWENVAANNSDVAYQRQSTASAVAGTVENVST------WNQVSQVSNGYPEHMVFD 366
Query: 368 PQYPGWYYDTISQVWCSLESYNSSIKTTNEAPHNQNEHVSAY-SYNYGNSSMYGDNVQPN 427
QYPGWYYDTI+Q W SL+SYN + +TT +A Q ++ +++ + ++ S D N
Sbjct: 367 SQYPGWYYDTIAQEWRSLDSYNQAFQTTGQANDQQVQNGNSFTAVDHSRESNVHDVYDKN 426
Query: 428 EY---GSSDVNNQ-GLDDKLIGSHHNENQQSLTSWSTESVSSQAEPTFGGKQLVDTSSSP 487
+ D+ +Q G D+ S++++NQQ+ W E+ G + T +S
Sbjct: 427 QILRTQKFDIQSQHGSWDQ---SYYDKNQQATNMWQPENA--------GAAEAAVTPASL 486
Query: 488 DFSVRNEQQKSISSYGTVPSYFQPSQGRSDVNGPTSLNSF-PSTMDYGHQVHQENSKEHE 547
S N+Q ++ S G V F+P + + + SF P M+ N ++
Sbjct: 487 SNSGGNQQVNNLYSTGPVAEQFKPYE--------SGVQSFIPQHMNVA------NVTQNG 546
Query: 548 HVSLSSDYYSNQKQVTNIQQSFHGGHQSSYASNVGRSSAGRPPHALVTFGFGGKLVVVK- 607
+S S+ +YS Q+ V + QSF ++ + GRSS GRPPHALV FGFGGKL+++K
Sbjct: 547 PMSFSNGFYSRQESVDDAPQSFQS--SQLFSPSAGRSSDGRPPHALVNFGFGGKLILMKD 606
Query: 608 ESSSFGNSTYGSQDPVGG-TISVLNMMEVVMGNTNANAIGNDVGASDYFSALCQHSFPGP 667
+S S NS++GSQ GG +ISVLN+ EV+ G+ + +++G + + YFS L Q S PGP
Sbjct: 607 DSGSLQNSSFGSQKGTGGSSISVLNLAEVISGSASYSSLGEN--SLSYFSCLDQQSLPGP 666
Query: 668 LVGGSVGNKELQKWIDERIANCESLGMDYRKGEALRLLLNLLKICHQHYGKLRSPFGTDT 727
LVGG+VG+K+L KW+DERI NCES MD+ +G+ L++LL+LL+I Q+YGKLRSPFG+D
Sbjct: 667 LVGGNVGSKDLHKWLDERILNCESSYMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGSDA 726
Query: 728 VLGESDNPESAVANLFASAKENGVQFNNYHSLSHCLQILPSEGQIQATASEVQSHLVSGR 787
+ E+D+ E+AVA LFA AKE+GVQ N Y +S CLQ LP E Q+Q TASEVQ+ L SGR
Sbjct: 727 LQKETDSAEAAVAKLFAIAKEDGVQ-NGYAPISQCLQHLPPESQMQVTASEVQNLLASGR 786
Query: 788 KKEALQCAQEGQLWGPALVLASQLGNQFYIDTVKQMALEQLVPGSPLRTLCLLIAGQPAE 847
K EALQCAQEG LWGPALV+A+QLG QFY+DTVKQMAL QLVPGSPLRTLCLL+AGQPAE
Sbjct: 787 KMEALQCAQEGHLWGPALVIAAQLGQQFYVDTVKQMALRQLVPGSPLRTLCLLVAGQPAE 846
Query: 848 VFSTVSTPNIN-PLGGSMAQNSSQFSANSMLDDWEENLAVITANRTKDDELVIIHLGDSL 907
VFST ST +I+ P ++ QF +SMLD WEENL +ITANRT DDELVI HLGD +
Sbjct: 847 VFSTGSTSDISFPGSVNLPPQQPQFGCSSMLDSWEENLGIITANRTTDDELVITHLGDCM 906
Query: 908 WKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSK 967
WKER EI AAHICYL+A+ NF++YSD+ARLCL+GADHWK+PRTYASPEAIQRTELYEYSK
Sbjct: 907 WKERGEIIAAHICYLIADKNFDTYSDTARLCLVGADHWKYPRTYASPEAIQRTELYEYSK 966
Query: 968 VLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQAVLKSLKTGRAPEVETWKQLLFS 1027
LGNSQ+ LL FQPYK++YA+MLAEVGK+S + KYCQAVLK LKTGR+PEVE WKQ + S
Sbjct: 967 TLGNSQYTLLTFQPYKVMYAHMLAEVGKLSTAQKYCQAVLKCLKTGRSPEVEMWKQFVSS 1026
Query: 1028 LEERIRAHQQGGYTANLAPAKLVGKLLNFFDSTAHRVVGGLPPPIPSTSHGNIHDNEHYH 1087
LEERIR HQQGGYTANL P KLVG LLNFF S HR VGG+PPP P ++ GN+ NE+ H
Sbjct: 1027 LEERIRIHQQGGYTANLHPEKLVGVLLNFFGSKTHRPVGGMPPPAPHSTKGNLQGNEYQH 1086
Query: 1088 -EPVVPRVSTSQSTMAMSSLIPSASMEPISERTADSSKMTVSSRSVSEPDFGRTPRQNQI 1147
+ +++ SQS MSSL+P AS+EP E +M V +RSVSEPDFGRTP Q
Sbjct: 1087 QQQEATKLAYSQSVNTMSSLMPPASVEPTHESGGSGRRMAVHTRSVSEPDFGRTPIQEMA 1146
Query: 1148 SSSKE-SMSADSQGKTSDSRA-SRFTRFGFGSQLLQKTVGLVLRPRLGRQAKLGEKNKFY 1207
SSKE ++ ++ K+S S A SRF+RFGFG + + TVG VL R ++AKLG +N+FY
Sbjct: 1147 DSSKEKAVDGVTKLKSSGSVAGSRFSRFGFG--IFKDTVGRVL-ARSSKEAKLGAENQFY 1206
Query: 1208 YDEKLKRWVEEGAESPAEEPALPPPPTTTTFQNGGTDYNLRSTLKKEAPSHDGNVEFASP 1267
YD+KLKRWVE G E PAEE ALPPPPT FQN Y +S + PS N ++S
Sbjct: 1207 YDDKLKRWVERGVEPPAEEAALPPPPTIGAFQNNSLGYENKSDM---IPS---NGNWSSG 1266
Query: 1268 NPIPAENSSGIPPIPPSSNQFSARGRMGVRSRYVDTFN-QGSGSSANLFQSPSVQSIKPK 1327
P P+ENSSGIPPI SNQFSARGR GVR+RYVDT+N G G+S + SPSVQ+ KP
Sbjct: 1267 GPTPSENSSGIPPISHGSNQFSARGRTGVRARYVDTYNPPGRGNSHTMIPSPSVQTAKPP 1326
Query: 1328 VAASAKFFVPSPALPTEPTEETIPESCHEDTTTIEHPSTSTTNDSFSSPSSTMPMQRFPS 1387
+ A AKFFV PA P + + E +T E + S + P M MQR+PS
Sbjct: 1327 IPAKAKFFV--PAAPASFSNDQAMEPAAAETRQEEISADEVVASSGAPP--PMMMQRYPS 1356
Query: 1388 LGNISVKGANKSVNGP-FGAENSRRTASWSGANFSDALSPPHKPTGLKP---------LG 1404
+ NI G SVNG SRRTASWSG NF+ + +PP P+ KP LG
Sbjct: 1387 MDNIQRNGLGISVNGDNHQPPTSRRTASWSG-NFNTSFTPPTSPSTFKPVLLNSSSSSLG 1356
BLAST of CmaCh16G011350 vs. TAIR 10
Match:
AT5G47480.1 (RGPR-related )
HSP 1 Score: 1055.8 bits (2729), Expect = 3.1e-308
Identity = 686/1469 (46.70%), Postives = 896/1469 (60.99%), Query Frame = 0
Query: 8 FQVEDQTDEEFFDKLVEDEYVEGDDSGS---KFLDGNDSDDAKAFSNLS-----MNDADN 67
F ++DQTDE+FFDKLV+D Y S + KF DG+DSDDAKAF+NLS + D D
Sbjct: 7 FLLDDQTDEDFFDKLVDDSYTPTASSSAKELKFDDGSDSDDAKAFANLSVVDDVLGDGDV 66
Query: 68 TFKDSGGVGDHGHEAIGEKGFVEADPGALGAHAEEKASLVSSNSVGANDDFGSESTSDSL 127
++G D +E G G V + + + A E V+S++ D S D +
Sbjct: 67 ALNEAGLGNDVANE--GTSGSVGKEEPS-SSIAPEAVQFVNSDANRLRDVDVVRSEVDDM 126
Query: 128 A----GKSGE----SGGPAIKEVGWSSFHAGSSQNWGQGFGSYSDFFNDLGNNDAGPLSG 187
A GK SG P +KEV W SF+A SS N G GFGSYSDFF +L + AG + G
Sbjct: 127 ALTETGKESNIVDGSGSPGVKEVDWGSFYADSSVNDGGGFGSYSDFFTEL-DATAGNVQG 186
Query: 188 SLENNLNGETMVKSSAEENHANNSVNYVPYQNDHQVFEGSTDQNHHQVFEGSTDQNHHQV 247
E + ++ AN+++N ++ FE Q H G N
Sbjct: 187 QAE-------VAVATGGNLVANDTINTSVGLDNSAGFEQHQGQVQHDSGSGQYVDN---- 246
Query: 248 YEGSTDQVSAENDLSSSQQWEDLYPGWKYDSVSGQWYQVENSVAAANVQAIFDSNLNGEW 307
SQ WE+LYPGWKYD+ +GQWYQV+ A N Q + N G W
Sbjct: 247 ----------------SQSWENLYPGWKYDASTGQWYQVDGQDATVNSQESY-INSTGNW 306
Query: 308 PDVSATKTEVVYLQTAQSVVGTVTETSTTDGVANFNHVSQGNTRYPEHMYFDPQYPGWYY 367
V+A ++V YL+ + T T + V+ +N VSQ YPEHM FD QYPGWYY
Sbjct: 307 ESVAADNSDVAYLKQST----TSAMAGTAESVSTWNQVSQVGNGYPEHMVFDAQYPGWYY 366
Query: 368 DTISQVWCSLESYNSSIKTT-NEAPHN---QNEHVSAYSY-NYGNSSMYGDNVQPNEYGS 427
DTI+Q W SL+SYN + +TT H+ QN H +Y N SS+Y N + + +
Sbjct: 367 DTIAQEWRSLDSYNQASQTTVTGQAHDQQVQNGHARTTTYHNNSQSSVYDVNNKNQTFKA 426
Query: 428 SDVNNQGLDDKLIGSHHNENQQSLTSWSTESVSSQAEPTFGGKQLVDTSSSPDFSVRNEQ 487
D QG S++ NQQ+ +W +V +AEP TS S N+Q
Sbjct: 427 QDFAIQGQHGSWDESYYANNQQAGNTWQPVNV-GKAEPAV-------TSDSLSRFGGNQQ 486
Query: 488 QKSISSYGTVPSYFQPSQGRSDVNGPTSLNSFPSTMDYGHQVHQENSKEHEHVSLSSDYY 547
++ S +V F+P+ + P +N +T ++ +S S+D Y
Sbjct: 487 VNNLYSTESVAEQFKPNTIGAQSFIPQHMNVASAT-------------QNGPLSFSNDLY 546
Query: 548 SNQKQVTNIQQSFHGGHQSSYASNVGRSSAGRPPHALVTFGFGGKLVVVKESS-SFGNST 607
+ Q+ V + Q+SF + ++ +VGRSS RPPHALV+FGFGGKL+V+K+++ S N++
Sbjct: 547 NRQQSVDHAQKSFQ--NNQLFSPSVGRSSDRRPPHALVSFGFGGKLIVMKDNNGSLQNTS 606
Query: 608 YGSQDPVGGTISVLNMMEVVMGNTNANAIGNDVGASDYFSALCQHSFPGPLVGGSVGNKE 667
+GSQ G +I+VLN+ EV+ G+ + ++ G D + YF L Q S PGPLVGG+VG+KE
Sbjct: 607 FGSQGIGGSSITVLNLAEVISGSASYSSPGED--SLSYFRCLHQQSLPGPLVGGNVGSKE 666
Query: 668 LQKWIDERIANCESLGMDYRKGEALRLLLNLLKICHQHYGKLRSPFGTDTVLGESDNPES 727
L KWIDER+ +CES MD+ +G+ L++LL+LL+I Q+YGKLRSPFG+D E+D PE+
Sbjct: 667 LHKWIDERLLHCESSNMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGSDASQKETDTPEA 726
Query: 728 AVANLFASAKENGVQFNNYHSLSHCLQILPSEGQIQATASEVQSHLVSGRKKEALQCAQE 787
AVA LFA AK++G+Q N Y +S CLQ LP E Q+Q TASEVQ+ L SGRK EALQCAQE
Sbjct: 727 AVAKLFAFAKKDGIQ-NGYAPISQCLQHLPPESQMQVTASEVQNLLASGRKMEALQCAQE 786
Query: 788 GQLWGPALVLASQLGNQFYIDTVKQMALEQLVPGSPLRTLCLLIAGQPAEVFSTVSTPNI 847
G LWGPALV+A+QLG+QFY+DTVKQMAL QL+PGSPLRTLCLL+AGQPAEV T
Sbjct: 787 GHLWGPALVIAAQLGDQFYVDTVKQMALRQLIPGSPLRTLCLLVAGQPAEVCPT------ 846
Query: 848 NPLGGSMAQNSSQFSANSMLDDWEENLAVITANRTKDDELVIIHLGDSLWKERSEITAAH 907
S++SMLD+WEENL +ITANRT DD+LVIIHLGDS+WKER EI AAH
Sbjct: 847 -------------GSSSSMLDNWEENLGIITANRTTDDDLVIIHLGDSMWKERGEIIAAH 906
Query: 908 ICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILLP 967
ICYL+A+ NF+ YS+SARLCL+GADHWK PRTYASP+AIQRTELYEYSK LGNSQ+ILLP
Sbjct: 907 ICYLIADKNFDPYSESARLCLVGADHWKCPRTYASPDAIQRTELYEYSKTLGNSQYILLP 966
Query: 968 FQPYKLIYAYMLAEVGKVSDSLKYCQAVLKSLKTGRAPEVETWKQLLFSLEERIRAHQQG 1027
FQPYK+IYA+MLAEVGK+S + KYCQAV++ LKT R+ EVE WKQ SLEERIR+HQ+G
Sbjct: 967 FQPYKIIYAHMLAEVGKLSTAQKYCQAVIRCLKTSRSSEVEMWKQFASSLEERIRSHQEG 1026
Query: 1028 GYTANLAPAKLVGKLLNFFDSTAHRVVGGLPPPIPSTSHGNIHDNEHYH-EPVVPRVSTS 1087
G NLAPAKLVGKLLN + G+PPP P ++ GN NE+ H + ++S S
Sbjct: 1027 G---NLAPAKLVGKLLN--------SLWGMPPPAPHSTTGNPQVNEYQHQQQEAAKLSYS 1086
Query: 1088 QSTMAMSSLIPSASMEPISERTADSSKMTVSSRSVSEPDFGRTPRQNQISSSKESMSADS 1147
QS MSSL+P AS+EP+ E + M SRSVSEPDF RTP Q+Q SSK+ + D
Sbjct: 1087 QSANTMSSLMPPASIEPVHEWGGNGRTMAAHSRSVSEPDFSRTPIQDQTDSSKDK-APDG 1146
Query: 1148 QGKTSDSR---ASRFTRFGFGSQLLQKTVGLVLRPRLGRQAKLGEKNKFYYDEKLKRWVE 1207
+ +R +SRF+RFG G +L+ TVG V R +AKLG +N+FYYD+ LKRWVE
Sbjct: 1147 VTQVKSTRKVPSSRFSRFGIG--ILKNTVGKVFPSRSSNEAKLGNENQFYYDDNLKRWVE 1206
Query: 1208 EGAESPAEEPALPPPPTTTTFQNGGTDYNLRSTLKKEAPSHDGNVEFASPNPIPAENSSG 1267
G E PAEE ALPPPPT+ F++ + +S +K E G+ ++S +P P+ENS G
Sbjct: 1207 RGVEPPAEEAALPPPPTSVPFRSNSLGHENKSEIKNEMSPSSGS--WSSGSPTPSENSPG 1266
Query: 1268 IPPIPPSSNQFSARGRMGVRSRYVDTFNQGSGSSANLFQSPSVQSIKPKVAASAKFFVP- 1327
IPP+ SNQFSARGRMGVR+RYVDT+NQGS S ++QSP VQS KP + A AKFFVP
Sbjct: 1267 IPPVSQGSNQFSARGRMGVRARYVDTYNQGSSS---MYQSPPVQSSKPPIPAKAKFFVPA 1326
Query: 1328 SPA------LPTEPTEETIPESCHEDTTTIEHPSTSTTNDSFSSPS-STMPMQRFPSLGN 1387
+PA + + ET E+ ++ + + SF SP+ S + MQRFPS+ N
Sbjct: 1327 APASFANDQVMESVSAETRQENSGDEAVVGSAGAPGPSQASFQSPTPSPIAMQRFPSVDN 1350
Query: 1388 ISVKGANKSVNGPFGAENSRRTASWSGA-NFSDALSPPHKPTGLKPLGEELGMPPSSFMP 1441
I G+ S+NG SRRTASWSG+ N S +SP S+F P
Sbjct: 1387 IRRSGSGTSLNGDLPQSVSRRTASWSGSVNSSSFMSP---------------TSASTFRP 1350
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FGK8 | 0.0e+00 | 49.13 | Protein transport protein SEC16B homolog OS=Arabidopsis thaliana OX=3702 GN=SEC1... | [more] |
Q9FGK9 | 4.3e-307 | 46.70 | Protein transport protein SEC16A homolog OS=Arabidopsis thaliana OX=3702 GN=MAG5... | [more] |
Q6BCB4 | 4.4e-33 | 30.26 | Protein transport protein Sec16B OS=Oryctolagus cuniculus OX=9986 GN=SEC16B PE=2... | [more] |
Q96JE7 | 3.1e-31 | 29.65 | Protein transport protein Sec16B OS=Homo sapiens OX=9606 GN=SEC16B PE=1 SV=2 | [more] |
Q75NY9 | 8.5e-29 | 27.84 | Protein transport protein Sec16B OS=Bos taurus OX=9913 GN=SEC16B PE=2 SV=1 | [more] |