CmaCh16G010040 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G010040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	GRAS family transcription factor
Location	Cma_Chr16: 7735848 .. 7737743 (-)
RNA-Seq Expression	CmaCh16G010040
Synteny	CmaCh16G010040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGCTGGGTGTTCTAGTTCAACATTGCTCTCGCCAAGGAATCATTTGAGAAGTGAAGTAGTACAGTCGCCGTTTCAAGCTTGCCTTTTGCAGTTTCCGCCTTCAATGAGCGCACAGAGATTGGATTTGCCCTGCAGCTTTTCCCACTCAAAAGACGCCTCTTCCGTCGTTCGATCCCCGTCGATCCGTCCGGTTGCTCTCTCGGTCGAGAAGCAGAGCATCAGGCTTCCGCCGCTATCCGCTGCTAACCAGCAAATCAAGCAAGAGTTTTGGAATGGGAAAGGTAAGAACTTGAAGAGAATTGCAGAGCAAGTTGGGATTGATGATGATGATGAATCTTCCATTAGCAATGCCAAGAGGAAGAGAGCGTGCAGAGACGACATAGGAGACGGGCTGATTCTGAGCCAATTCGGCGGTGGGGTTCGGAGTTTCTGGTATCATCAACAGCCTGATGGGGATGAAGGACTCTGCTTTCTTCCTGGAAGTTCAACGTCGCCGTTTATGTCAGAGATCGCTGATTTGGGAGAAGGAAATGACGGAGAAAGCAGCCAAGTGAAGGCGCAGGACAGCTCGGACTCGGTCTCCGGTTCAGATTCGGGGTCGAGTTCATCATCAGGAAGTGAGAGATTTGCAGCAGCAGAAGCAGGGCCAGAAATTGGAAATGGGAGCTCAAGAAATCCTTCATATCATCACCATCAAGGCTCTGGCTCAGAAAATGAGAGAGGAGAAGAAGAATCATTTGAGCTGTTGAGTGTTCTAATGGCATGTGTGGAAGCAATAAGATCAAAGAACATTACTTTGATTAACCATTTGATAGAAAAACTTGGTAGCCAAGCTTCACCAAGAGGTTCATCACCCATTACACGTTTGATTGCGTATTACACAGAGGCTTTAGCAGTAAGAGTGAGCAGAGTTTGGCCACAAGTGTTTCACGTAAGGCCGCCGAGGGAATACAATCGGATCGACGACGATACAGGTATAGCGTTACGTCTTCTAAACGAGGTGAGTCCGATCCCGAAATTCATCTACTTCACAGCAAATGAGATGTTGCTGAGAGCATTTGAAGGGAAAGACAAGGTTCACATCATAGACTTTGACATAAAGGAAGGGCTGCAATGGCCGAGCTTGTTTCAGAGTTTGGCATCTCGAGTGAATCCTCCGAGTCATGTCCGAATCACCGGGATCGGTGAATCGAAGCAGGAATTGAACGAAACGGGAGATAGGCTGGCGGGGTTCGCCGAGGCATTGAGGCTGCCGTTCGAGTTCCACGCGGTGGTGGACCGGTTGGAGGATGTGAGACTATGGATGCTTCATGTCAAGGAGAATGAGAGTGTAGGAGTGAATTGCATTCTCCAACTGCACAAGACTCTGTATGATAATAACATCAATGGTGGCGGGGGAGCATTGAAGGACTTTTTGGGGCTTATAAGAAGCACGAACCCGAGAATTGTTGTGATGGCCGAGCAAGAAGCCGAGCACAACGACCCGAGATTGGAGACTCGAGTTGCAGCCACAATTAAGTACTATGGTGCCATATTCGACTCCCTCGACACTAGCCTTCCACCGAACAGCTCGGGAAGGTTGAAAATCGAGGAGATGTTTGGGAGGGAGATAAGGAACATGATAGGATGTGAAGGAAGGGAGAGGTATGAAAGGCATGTTGGATTTGAGAAATGGAAGAAAGTGATGGAGAAGCAAGGAGGGCTGCGATGCGTCGGGATTCGGGACGATCGAGAGCTTCTTCAGAGCCAAATCCTGTTGAAAATGTACTCATCAGCTGATGGATTCAATGTGAGAAAGATTGGAGAAGGAGGAGCTCAAGCAGTTTGCTTAGCTTGGGAAGAACAACCACTTTACAGTGTGTCAGGATGGACAGCAGCAGAAATATCTTGA

mRNA sequence

ATGTTGGCTGGGTGTTCTAGTTCAACATTGCTCTCGCCAAGGAATCATTTGAGAAGTGAAGTAGTACAGTCGCCGTTTCAAGCTTGCCTTTTGCAGTTTCCGCCTTCAATGAGCGCACAGAGATTGGATTTGCCCTGCAGCTTTTCCCACTCAAAAGACGCCTCTTCCGTCGTTCGATCCCCGTCGATCCGTCCGGTTGCTCTCTCGGTCGAGAAGCAGAGCATCAGGCTTCCGCCGCTATCCGCTGCTAACCAGCAAATCAAGCAAGAGTTTTGGAATGGGAAAGGTAAGAACTTGAAGAGAATTGCAGAGCAAGTTGGGATTGATGATGATGATGAATCTTCCATTAGCAATGCCAAGAGGAAGAGAGCGTGCAGAGACGACATAGGAGACGGGCTGATTCTGAGCCAATTCGGCGGTGGGGTTCGGAGTTTCTGGTATCATCAACAGCCTGATGGGGATGAAGGACTCTGCTTTCTTCCTGGAAGTTCAACGTCGCCGTTTATGTCAGAGATCGCTGATTTGGGAGAAGGAAATGACGGAGAAAGCAGCCAAGTGAAGGCGCAGGACAGCTCGGACTCGGTCTCCGGTTCAGATTCGGGGTCGAGTTCATCATCAGGAAGTGAGAGATTTGCAGCAGCAGAAGCAGGGCCAGAAATTGGAAATGGGAGCTCAAGAAATCCTTCATATCATCACCATCAAGGCTCTGGCTCAGAAAATGAGAGAGGAGAAGAAGAATCATTTGAGCTGTTGAGTGTTCTAATGGCATGTGTGGAAGCAATAAGATCAAAGAACATTACTTTGATTAACCATTTGATAGAAAAACTTGGTAGCCAAGCTTCACCAAGAGGTTCATCACCCATTACACGTTTGATTGCGTATTACACAGAGGCTTTAGCAGTAAGAGTGAGCAGAGTTTGGCCACAAGTGTTTCACGTAAGGCCGCCGAGGGAATACAATCGGATCGACGACGATACAGGTATAGCGTTACGTCTTCTAAACGAGGTGAGTCCGATCCCGAAATTCATCTACTTCACAGCAAATGAGATGTTGCTGAGAGCATTTGAAGGGAAAGACAAGGTTCACATCATAGACTTTGACATAAAGGAAGGGCTGCAATGGCCGAGCTTGTTTCAGAGTTTGGCATCTCGAGTGAATCCTCCGAGTCATGTCCGAATCACCGGGATCGGTGAATCGAAGCAGGAATTGAACGAAACGGGAGATAGGCTGGCGGGGTTCGCCGAGGCATTGAGGCTGCCGTTCGAGTTCCACGCGGTGGTGGACCGGTTGGAGGATGTGAGACTATGGATGCTTCATGTCAAGGAGAATGAGAGTGTAGGAGTGAATTGCATTCTCCAACTGCACAAGACTCTGTATGATAATAACATCAATGGTGGCGGGGGAGCATTGAAGGACTTTTTGGGGCTTATAAGAAGCACGAACCCGAGAATTGTTGTGATGGCCGAGCAAGAAGCCGAGCACAACGACCCGAGATTGGAGACTCGAGTTGCAGCCACAATTAAGTACTATGGTGCCATATTCGACTCCCTCGACACTAGCCTTCCACCGAACAGCTCGGGAAGGTTGAAAATCGAGGAGATGTTTGGGAGGGAGATAAGGAACATGATAGGATGTGAAGGAAGGGAGAGGTATGAAAGGCATGTTGGATTTGAGAAATGGAAGAAAGTGATGGAGAAGCAAGGAGGGCTGCGATGCGTCGGGATTCGGGACGATCGAGAGCTTCTTCAGAGCCAAATCCTGTTGAAAATGTACTCATCAGCTGATGGATTCAATGTGAGAAAGATTGGAGAAGGAGGAGCTCAAGCAGTTTGCTTAGCTTGGGAAGAACAACCACTTTACAGTGTGTCAGGATGGACAGCAGCAGAAATATCTTGA

Coding sequence (CDS)

ATGTTGGCTGGGTGTTCTAGTTCAACATTGCTCTCGCCAAGGAATCATTTGAGAAGTGAAGTAGTACAGTCGCCGTTTCAAGCTTGCCTTTTGCAGTTTCCGCCTTCAATGAGCGCACAGAGATTGGATTTGCCCTGCAGCTTTTCCCACTCAAAAGACGCCTCTTCCGTCGTTCGATCCCCGTCGATCCGTCCGGTTGCTCTCTCGGTCGAGAAGCAGAGCATCAGGCTTCCGCCGCTATCCGCTGCTAACCAGCAAATCAAGCAAGAGTTTTGGAATGGGAAAGGTAAGAACTTGAAGAGAATTGCAGAGCAAGTTGGGATTGATGATGATGATGAATCTTCCATTAGCAATGCCAAGAGGAAGAGAGCGTGCAGAGACGACATAGGAGACGGGCTGATTCTGAGCCAATTCGGCGGTGGGGTTCGGAGTTTCTGGTATCATCAACAGCCTGATGGGGATGAAGGACTCTGCTTTCTTCCTGGAAGTTCAACGTCGCCGTTTATGTCAGAGATCGCTGATTTGGGAGAAGGAAATGACGGAGAAAGCAGCCAAGTGAAGGCGCAGGACAGCTCGGACTCGGTCTCCGGTTCAGATTCGGGGTCGAGTTCATCATCAGGAAGTGAGAGATTTGCAGCAGCAGAAGCAGGGCCAGAAATTGGAAATGGGAGCTCAAGAAATCCTTCATATCATCACCATCAAGGCTCTGGCTCAGAAAATGAGAGAGGAGAAGAAGAATCATTTGAGCTGTTGAGTGTTCTAATGGCATGTGTGGAAGCAATAAGATCAAAGAACATTACTTTGATTAACCATTTGATAGAAAAACTTGGTAGCCAAGCTTCACCAAGAGGTTCATCACCCATTACACGTTTGATTGCGTATTACACAGAGGCTTTAGCAGTAAGAGTGAGCAGAGTTTGGCCACAAGTGTTTCACGTAAGGCCGCCGAGGGAATACAATCGGATCGACGACGATACAGGTATAGCGTTACGTCTTCTAAACGAGGTGAGTCCGATCCCGAAATTCATCTACTTCACAGCAAATGAGATGTTGCTGAGAGCATTTGAAGGGAAAGACAAGGTTCACATCATAGACTTTGACATAAAGGAAGGGCTGCAATGGCCGAGCTTGTTTCAGAGTTTGGCATCTCGAGTGAATCCTCCGAGTCATGTCCGAATCACCGGGATCGGTGAATCGAAGCAGGAATTGAACGAAACGGGAGATAGGCTGGCGGGGTTCGCCGAGGCATTGAGGCTGCCGTTCGAGTTCCACGCGGTGGTGGACCGGTTGGAGGATGTGAGACTATGGATGCTTCATGTCAAGGAGAATGAGAGTGTAGGAGTGAATTGCATTCTCCAACTGCACAAGACTCTGTATGATAATAACATCAATGGTGGCGGGGGAGCATTGAAGGACTTTTTGGGGCTTATAAGAAGCACGAACCCGAGAATTGTTGTGATGGCCGAGCAAGAAGCCGAGCACAACGACCCGAGATTGGAGACTCGAGTTGCAGCCACAATTAAGTACTATGGTGCCATATTCGACTCCCTCGACACTAGCCTTCCACCGAACAGCTCGGGAAGGTTGAAAATCGAGGAGATGTTTGGGAGGGAGATAAGGAACATGATAGGATGTGAAGGAAGGGAGAGGTATGAAAGGCATGTTGGATTTGAGAAATGGAAGAAAGTGATGGAGAAGCAAGGAGGGCTGCGATGCGTCGGGATTCGGGACGATCGAGAGCTTCTTCAGAGCCAAATCCTGTTGAAAATGTACTCATCAGCTGATGGATTCAATGTGAGAAAGATTGGAGAAGGAGGAGCTCAAGCAGTTTGCTTAGCTTGGGAAGAACAACCACTTTACAGTGTGTCAGGATGGACAGCAGCAGAAATATCTTGA

Protein sequence

MLAGCSSSTLLSPRNHLRSEVVQSPFQACLLQFPPSMSAQRLDLPCSFSHSKDASSVVRSPSIRPVALSVEKQSIRLPPLSAANQQIKQEFWNGKGKNLKRIAEQVGIDDDDESSISNAKRKRACRDDIGDGLILSQFGGGVRSFWYHQQPDGDEGLCFLPGSSTSPFMSEIADLGEGNDGESSQVKAQDSSDSVSGSDSGSSSSSGSERFAAAEAGPEIGNGSSRNPSYHHHQGSGSENERGEEESFELLSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQVFHVRPPREYNRIDDDTGIALRLLNEVSPIPKFIYFTANEMLLRAFEGKDKVHIIDFDIKEGLQWPSLFQSLASRVNPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKENESVGVNCILQLHKTLYDNNINGGGGALKDFLGLIRSTNPRIVVMAEQEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNSSGRLKIEEMFGREIRNMIGCEGRERYERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQSQILLKMYSSADGFNVRKIGEGGAQAVCLAWEEQPLYSVSGWTAAEIS

Homology

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BLAST of CmaCh16G010040 vs. ExPASy Swiss-Prot
Match: Q9CAN3 (Scarecrow-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 3.2e-166
Identity = 348/686 (50.73%), Postives = 446/686 (65.01%), Query Frame = 0


Query: 1   MLAGCSSSTLLSPRNHLRSEVVQSPFQACLLQFPPSMSAQRLDLPCSFSHSKDASSVVRS 60
           MLAGCSSS+LLSP   LRSE V +        FP  M+ QRLDLPCS S S+       +
Sbjct: 1   MLAGCSSSSLLSPTRRLRSEAVAATSATVSAHFP--MNTQRLDLPCSSSFSRK-----ET 60

Query: 61  PSIRPVALSVE-----------------------KQSIRLPPLSAANQQIKQEFW----N 120
           PS RP+  S+                        KQ+I+LPPL+      +   W    N
Sbjct: 61  PSSRPLGRSISLDNSNNNNNKPIERKTKTSGCSLKQNIKLPPLATTRGNGEGFSWNNDNN 120

Query: 121 GKGKNLKRIAEQVGIDDDDESSISNAKRKRACRDDIGDGLILSQFGGGVRS-----FWYH 180
            +GK+LKR+AE      +DES +S AKR + C ++   G     F G   S     F   
Sbjct: 121 NRGKSLKRLAE------EDESCLSRAKRTK-CENE--GGFWFEHFTGQDSSSPALPFSLT 180

Query: 181 QQPDGDEGLCFLPGSSTS--------PFMSEIADLGEGNDGESSQVKAQDSSDSVSGSDS 240
              D +E +CF+P    S          ++E+A +G+  D ESS   A      V  +  
Sbjct: 181 CSGDDEEKVCFVPSEVISQPLPNWVDSVITELAGIGD-KDVESSLPAA------VKEASG 240

Query: 241 GSSSSSGSERFAAAEAGPEIGNGSSRNPSYHHHQGSGSENERGE----------EESFEL 300
           GSS+S+ SE  + +   PE  NG SRNP  + H+G+  E   G           +  FEL
Sbjct: 241 GSSTSASSESRSLSHRVPEPTNG-SRNP--YSHRGATEERTTGNINNNNNRNDLQRDFEL 300

Query: 301 LSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQV 360
           +++L  C++AIRS+NI  INH I + G  ASPRG +P+TRLIAYY EALA+RV+R+WP +
Sbjct: 301 VNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPHI 360

Query: 361 FHVRPPREYNR-IDDDTGIALRLLNEVSPIPKFIYFTANEMLLRAFEGKDKVHIIDFDIK 420
           FH+ PPRE++R ++D++G ALR LN+V+PIPKFI+FTANEMLLRAFEGK++VHIIDFDIK
Sbjct: 361 FHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIK 420

Query: 421 EGLQWPSLFQSLASRVNPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEFHAVVDR 480
           +GLQWPS FQSLASR+NPP HVRITGIGESK ELNETGDRL GFAEA+ L FEFH VVDR
Sbjct: 421 QGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEFHPVVDR 480

Query: 481 LEDVRLWMLHVKENESVGVNCILQLHKTLYDNNINGGGGALKDFLGLIRSTNPRIVVMAE 540
           LEDVRLWMLHVKE ESV VNC++Q+HKTLYD    G G A++DFLGLIRSTNP  +V+AE
Sbjct: 481 LEDVRLWMLHVKEGESVAVNCVMQMHKTLYD----GTGAAIRDFLGLIRSTNPIALVLAE 540

Query: 541 QEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNSSGRLKIEEM-FGREIRNMIGCEGR 600
           QEAEHN  +LETRV  ++KYY A+FD++ T+L  +S  R+K+EEM FGREIRN++ CEG 
Sbjct: 541 QEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGS 600

Query: 601 ERYERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQSQILLKMYSSADG--FNVRKI---- 627
            R ERHVGF  W++++E Q G R +G+  +RE+LQS++LL+MY S +   FNV +     
Sbjct: 601 HRQERHVGFRHWRRMLE-QLGFRSLGV-SEREVLQSKMLLRMYGSDNEGFFNVERSDEDN 654

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BLAST of CmaCh16G010040 vs. ExPASy Swiss-Prot
Match: Q9LWU9 (Protein DWARF AND LOW-TILLERING OS=Oryza sativa subsp. japonica OX=39947 GN=DLT PE=1 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 7.6e-107
Identity = 250/620 (40.32%), Postives = 344/620 (55.48%), Query Frame = 0


Query: 38  SAQRLD-LPCSFS---HSKDASSVVRSPSIRPVALSVEKQSIRLPPLSAANQQIKQEFWN 97
           +AQR D LPC FS      D ++   +   R  A +   ++   PP++ +     +    
Sbjct: 16  TAQRFDILPCGFSKRGSRGDGAAPRVAGDARSGATTCSFRTHPAPPVTQSVSWGAKPEPG 75

Query: 98  GKGKNLKRIAEQVGIDD--DDESSISNAKRKRACRDDIGDGLILSQFGGGVRSFWYHQQP 157
           G G    R  ++   +D  ++   I  AKR R               GG     W+HQ  
Sbjct: 76  GNGNGAHRAVKRAHDEDAVEEYGPIVRAKRTR--------------MGGDGDEVWFHQSI 135

Query: 158 DG--------------DEGLCFLPGSSTSPFMSEIADLGEGNDGESSQVKAQDSSDSVSG 217
            G              +E +  +P ++  P        G    G S    A    +  S 
Sbjct: 136 AGTMQATAAGEGEEAEEEKVFLVPSAAAFPH-------GMAAAGPS---LAAAKKEEYSK 195

Query: 218 SDSGSSSSSGSERFAAAEAGPEIGNGSSRNPSYHHHQGSGSENERGEEESFELLSVLMAC 277
           S S SSSSSG++  ++A   P       + P +    G  +  +  E E+ EL+  L AC
Sbjct: 196 SPSDSSSSSGTDGGSSAMMPP------PQPPEFDARNGVPAPGQ-AEREALELVRALTAC 255

Query: 278 VEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQVFHVRPPR 337
            +++ + N    N+ + +LG  ASP G +P+ R+ AY+TEALA+RV R+WP +F + PPR
Sbjct: 256 ADSLSAGNHEAANYYLARLGEMASPAGPTPMHRVAAYFTEALALRVVRMWPHMFDIGPPR 315

Query: 338 EYNRI----DDDTGIALRLLNEVSPIPKFIYFTANEMLLRAFEGKDKVHIIDFDIKEGLQ 397
           E         DD  +ALR+LN ++PIP+F++FT NE LLR FEG ++VH+IDFDIK+GLQ
Sbjct: 316 ELTDDAFGGGDDDAMALRILNAITPIPRFLHFTLNERLLREFEGHERVHVIDFDIKQGLQ 375

Query: 398 WPSLFQSLASRVNPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEFHAVVDRLEDV 457
           WP L QSLA+R  PP+HVRITG+GES+QEL ETG RLA  A AL L FEFHAVVDRLEDV
Sbjct: 376 WPGLLQSLAARAVPPAHVRITGVGESRQELQETGARLARVAAALGLAFEFHAVVDRLEDV 435

Query: 458 RLWMLHVKENESVGVNCILQLHKTLYDNNINGGGGALKDFLGLIRSTNPRIVVMAEQEAE 517
           RLWMLHVK  E V VNC+L +H+ L D+       AL DFLGL RST   I+++ E E  
Sbjct: 436 RLWMLHVKRGECVAVNCVLAMHRLLRDD------AALTDFLGLARSTGATILLLGEHEGG 495

Query: 518 H-NDPRLETRVAATIKYYGAIFDSLDTS-LPPNSSGRLKIEEMFGREIRNMIGCEGRERY 577
             N  R E R A  ++YY A FD++D + LP  S  R K EEMF REIRN +  EG ER+
Sbjct: 496 GLNSGRWEARFARALRYYAAAFDAVDAAGLPEASPARAKAEEMFAREIRNAVAFEGPERF 555

Query: 578 ERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQSQILLKMYSSADGFNVRKI---GEGGAQ 629
           ERH  F  W++ ME  GG +  GI  +RE +Q +++ +M+   D + V+     G GG +
Sbjct: 556 ERHESFAGWRRRMEDGGGFKNAGI-GEREAMQGRMIARMF-GPDKYTVQAHGGGGSGGGE 596

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BLAST of CmaCh16G010040 vs. ExPASy Swiss-Prot
Match: A0A145P7T2 (GRAS family protein RAM1 OS=Lotus japonicus OX=34305 GN=RAM1 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-62
Identity = 138/399 (34.59%), Postives = 217/399 (54.39%), Query Frame = 0


Query: 241 ERGEEESFELLSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALA 300
           ++ ++   +L+ +L+AC EA+  +   L    +  L    +P G S + R+ A +TE+L+
Sbjct: 309 DQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDS-MQRVAACFTESLS 368

Query: 301 VRVSRVW---PQVFH--VRPPRE--------YNRIDDDTGIALRLLNEVSPIPKFIYFTA 360
            R++      PQ        PR         +     +     +++ +  P  KF +FTA
Sbjct: 369 ARLAATLTTKPQSISNGTSMPRSSSSSCLSPFPSNSIEVLKIYQIVYQACPYVKFAHFTA 428

Query: 361 NEMLLRAFEGKDKVHIIDFDIKEGLQWPSLFQSLASRVNPPSHVRITGIGESKQELNETG 420
           N+ +  AFE +++VH+ID DI +G QWP+  Q+LA+R      +RITG+G     + ETG
Sbjct: 429 NQAIFEAFEAEERVHVIDLDILQGYQWPTFMQALAARPGGAPFLRITGVGPCIDSVRETG 488

Query: 421 DRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKENESVGVNCILQLHKTLYDNNINGGG 480
             L   A +LR+PFEFH V ++LED++  M + +  E++ VN + +LH+          G
Sbjct: 489 RCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRV--------PG 548

Query: 481 GALKDFLGLIRSTNPRIVVMAEQEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNSSG 540
             L + L +IR   P IV + EQEA HN P    R    + YY AIFDSLD + PP S+ 
Sbjct: 549 SHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQ 608

Query: 541 RLKIEE-MFGREIRNMIGCEGRERYERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQSQI 600
           R K+E+ +F  EIRN++ CEG ER ERH   EKW+K+ME + G R V +     + QS+I
Sbjct: 609 RAKVEQYIFAPEIRNIVACEGAERIERHERLEKWRKIMEGK-GFRGVAL-SPNAVTQSRI 668

Query: 601 LLKMYSSADGFNVRKIGEGGAQAVCLAWEEQPLYSVSGW 626
           LL +Y S DG+ + +        + L W+++ + + S W
Sbjct: 669 LLGLY-SCDGYRLTE----DKGCLLLGWQDRAIIAASAW 691

[Close]

BLAST of CmaCh16G010040 vs. ExPASy Swiss-Prot
Match: A0A0M4FMK2 (GRAS family protein RAM1 OS=Petunia hybrida OX=4102 GN=RAM1 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.8e-61
Identity = 134/389 (34.45%), Postives = 218/389 (56.04%), Query Frame = 0


Query: 241 ERGEEESFELLSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALA 300
           ++ ++   +L+ +L+AC EA+  ++  L    +  L    +P G S + R+ + +TEAL+
Sbjct: 321 DQEQDSGLQLVHLLLACAEAVSKEDYMLARRYLHHLNRVVTPLGDS-MQRVASCFTEALS 380

Query: 301 VRVSRVW---PQVFHVRPPREYNRIDDDTGIALRLLNEVSPIPKFIYFTANEMLLRAFEG 360
            R++      P    ++P   +     +     ++L +  P  KF +FTAN+ +  AFE 
Sbjct: 381 ARLAATLATKPSTSALKPFNPFPPNSLEILKIYQILYQACPYVKFAHFTANQAIFEAFEA 440

Query: 361 KDKVHIIDFDIKEGLQWPSLFQSLASRVNPPSHVRITGIGESKQELNETGDRLAGFAEAL 420
           +++VHIID DI +G QWP+  Q+LA+R      +RITG+G S + + ETG  L   A +L
Sbjct: 441 EERVHIIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPSPEAVRETGRCLTELAHSL 500

Query: 421 RLPFEFHAVVDRLEDVRLWMLHVKENESVGVNCILQLHKTLYDNNINGGGGALKDFLGLI 480
            +PFEFH V ++LED++  M + +  E++ VN + +LH+   +         + + L +I
Sbjct: 501 HVPFEFHPVGEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPVN--------CIGNLLAMI 560

Query: 481 RSTNPRIVVMAEQEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNSSGRLKIEE-MFG 540
           R   P IV + EQEA HN P    R    + YY AIFDSLD + P +SS R K+E+ +F 
Sbjct: 561 RDQAPNIVTIVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPADSSQRAKLEQYIFA 620

Query: 541 REIRNMIGCEGRERYERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQSQILLKMYSSADG 600
            EI N++ CEG ER  RH   EKW+++ME + G + V +     + QS+ILL +Y S DG
Sbjct: 621 PEIMNIVSCEGPERVVRHERLEKWRRLMEGK-GFKGVAL-SANAVTQSKILLGLY-SCDG 680

Query: 601 FNVRKIGEGGAQAVCLAWEEQPLYSVSGW 626
           +   K+ E     + L W+++ + + S W
Sbjct: 681 Y---KLTEDDG-CLLLGWQDRAILAASAW 693

[Close]

BLAST of CmaCh16G010040 vs. ExPASy Swiss-Prot
Match: G7L166 (GRAS family protein RAM1 OS=Medicago truncatula OX=3880 GN=RAM1 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.8e-60
Identity = 132/401 (32.92%), Postives = 215/401 (53.62%), Query Frame = 0


Query: 241 ERGEEESFELLSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALA 300
           E+ ++   +L+ +L+AC EA+      L    + +L    +P G S + R+ + +TE+L+
Sbjct: 288 EQEQDSGLQLVHLLLACAEAVAKGEYMLARRYLHQLNRVVTPLGDS-MQRVASCFTESLS 347

Query: 301 VRVSRVWPQVFHVRPPREYNRIDDDTGIA---------------LRLLNEVSPIPKFIYF 360
            R++               + +   +  +                +++ +  P  KF +F
Sbjct: 348 ARLAATLTTKSSSTKKLAPSSLSSSSSSSCLSTFPSNPMEVLKIYQIVYQACPYIKFAHF 407

Query: 361 TANEMLLRAFEGKDKVHIIDFDIKEGLQWPSLFQSLASRVNPPSHVRITGIGESKQELNE 420
           TAN+ +  AFE +++VH+ID DI +G QWP+  Q+LA+R      +RITG+G   + + E
Sbjct: 408 TANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRE 467

Query: 421 TGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKENESVGVNCILQLHKTLYDNNING 480
           TG  L   A +LR+PFEFH V ++LED++  M + +  E++ VN + +LH+         
Sbjct: 468 TGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRV-------- 527

Query: 481 GGGALKDFLGLIRSTNPRIVVMAEQEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNS 540
            G  L + L +IR   P IV + EQEA HN P    R    + YY AIFDSLD + P  S
Sbjct: 528 PGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVES 587

Query: 541 SGRLKIEE-MFGREIRNMIGCEGRERYERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQS 600
           + R K+E+ +F  EIRN++ CEG ER ERH   EKW+K+ME + G + V +     + QS
Sbjct: 588 APRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGK-GFKGVPL-SPNAVTQS 647

Query: 601 QILLKMYSSADGFNVRKIGEGGAQAVCLAWEEQPLYSVSGW 626
           +ILL +Y S DG+ + +        + L W+++ + + S W
Sbjct: 648 RILLGLY-SCDGYRLTE----DKGCLLLGWQDRAIIAASAW 672

[Close]

BLAST of CmaCh16G010040 vs. TAIR 10
Match: AT1G63100.1 (GRAS family transcription factor )

HSP 1 Score: 586.6 bits (1511), Expect = 2.3e-167
Identity = 348/686 (50.73%), Postives = 446/686 (65.01%), Query Frame = 0


Query: 1   MLAGCSSSTLLSPRNHLRSEVVQSPFQACLLQFPPSMSAQRLDLPCSFSHSKDASSVVRS 60
           MLAGCSSS+LLSP   LRSE V +        FP  M+ QRLDLPCS S S+       +
Sbjct: 1   MLAGCSSSSLLSPTRRLRSEAVAATSATVSAHFP--MNTQRLDLPCSSSFSRK-----ET 60

Query: 61  PSIRPVALSVE-----------------------KQSIRLPPLSAANQQIKQEFW----N 120
           PS RP+  S+                        KQ+I+LPPL+      +   W    N
Sbjct: 61  PSSRPLGRSISLDNSNNNNNKPIERKTKTSGCSLKQNIKLPPLATTRGNGEGFSWNNDNN 120

Query: 121 GKGKNLKRIAEQVGIDDDDESSISNAKRKRACRDDIGDGLILSQFGGGVRS-----FWYH 180
            +GK+LKR+AE      +DES +S AKR + C ++   G     F G   S     F   
Sbjct: 121 NRGKSLKRLAE------EDESCLSRAKRTK-CENE--GGFWFEHFTGQDSSSPALPFSLT 180

Query: 181 QQPDGDEGLCFLPGSSTS--------PFMSEIADLGEGNDGESSQVKAQDSSDSVSGSDS 240
              D +E +CF+P    S          ++E+A +G+  D ESS   A      V  +  
Sbjct: 181 CSGDDEEKVCFVPSEVISQPLPNWVDSVITELAGIGD-KDVESSLPAA------VKEASG 240

Query: 241 GSSSSSGSERFAAAEAGPEIGNGSSRNPSYHHHQGSGSENERGE----------EESFEL 300
           GSS+S+ SE  + +   PE  NG SRNP  + H+G+  E   G           +  FEL
Sbjct: 241 GSSTSASSESRSLSHRVPEPTNG-SRNP--YSHRGATEERTTGNINNNNNRNDLQRDFEL 300

Query: 301 LSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQV 360
           +++L  C++AIRS+NI  INH I + G  ASPRG +P+TRLIAYY EALA+RV+R+WP +
Sbjct: 301 VNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPHI 360

Query: 361 FHVRPPREYNR-IDDDTGIALRLLNEVSPIPKFIYFTANEMLLRAFEGKDKVHIIDFDIK 420
           FH+ PPRE++R ++D++G ALR LN+V+PIPKFI+FTANEMLLRAFEGK++VHIIDFDIK
Sbjct: 361 FHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIK 420

Query: 421 EGLQWPSLFQSLASRVNPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEFHAVVDR 480
           +GLQWPS FQSLASR+NPP HVRITGIGESK ELNETGDRL GFAEA+ L FEFH VVDR
Sbjct: 421 QGLQWPSFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEFHPVVDR 480

Query: 481 LEDVRLWMLHVKENESVGVNCILQLHKTLYDNNINGGGGALKDFLGLIRSTNPRIVVMAE 540
           LEDVRLWMLHVKE ESV VNC++Q+HKTLYD    G G A++DFLGLIRSTNP  +V+AE
Sbjct: 481 LEDVRLWMLHVKEGESVAVNCVMQMHKTLYD----GTGAAIRDFLGLIRSTNPIALVLAE 540

Query: 541 QEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNSSGRLKIEEM-FGREIRNMIGCEGR 600
           QEAEHN  +LETRV  ++KYY A+FD++ T+L  +S  R+K+EEM FGREIRN++ CEG 
Sbjct: 541 QEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGS 600

Query: 601 ERYERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQSQILLKMYSSADG--FNVRKI---- 627
            R ERHVGF  W++++E Q G R +G+  +RE+LQS++LL+MY S +   FNV +     
Sbjct: 601 HRQERHVGFRHWRRMLE-QLGFRSLGV-SEREVLQSKMLLRMYGSDNEGFFNVERSDEDN 654

[Close]

BLAST of CmaCh16G010040 vs. TAIR 10
Match: AT1G50420.1 (scarecrow-like 3 )

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-59
Identity = 142/444 (31.98%), Postives = 215/444 (48.42%), Query Frame = 0


Query: 244 EEESFELLSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRV 303
           EE    L+ +L+ C   + S ++   N  +E+L   ASP G + + R+ AY+TEALA R+
Sbjct: 48  EERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDT-MQRIAAYFTEALANRI 107

Query: 304 SRVWPQVFHV--RPPREYNRIDDDTGIALRLLNEVSPIPKFIYFTANEMLLRAFEGKDKV 363
            + WP ++          N + ++  +  RL  E+ PI K  Y   N  +L A EG+  V
Sbjct: 108 LKSWPGLYKALNATQTRTNNVSEEIHVR-RLFFEMFPILKVSYLLTNRAILEAMEGEKMV 167

Query: 364 HIIDFDIKEGLQWPSLFQSLASRVNPPSHVRITGIGESKQELNETGDRLAGFAEALRLPF 423
           H+ID D  E  QW +L Q+  SR   P H+RITG+   K+ L +   RL   AE L +PF
Sbjct: 168 HVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPF 227

Query: 424 EFHAVVDRLEDVRLWMLHVKENESVGVNCILQLHKTL--------------YDNNING-- 483
           +F+ VV RL+ + +  L VK  E++ V+ +LQLH  L              + NN +G  
Sbjct: 228 QFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVD 287

Query: 484 ---------------------------------------GGGALKDFLGLIRSTNPRIVV 543
                                                    G    FL  I   +P+++V
Sbjct: 288 LQRVLMMSHGSAAEARENDMSNNNGYSPSGDSASSLPLPSSGRTDSFLNAIWGLSPKVMV 347

Query: 544 MAEQEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNSSGRLKIEEM-FGREIRNMIGC 603
           + EQ+++HN   L  R+  ++  Y A+FD L+T +P  S  R+K+E+M FG EI+N+I C
Sbjct: 348 VTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISC 407

Query: 604 EGRERYERHVGFEKWKKVMEKQG----GLRCVGIRDDRELLQSQILLKMYSSADGFNVRK 626
           EG ER ERH   EKW + ++  G     L    +   R LLQ           DG+ +++
Sbjct: 408 EGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQG-------CGFDGYRIKE 467

[Close]

BLAST of CmaCh16G010040 vs. TAIR 10
Match: AT1G55580.1 (GRAS family transcription factor )

HSP 1 Score: 224.6 bits (571), Expect = 2.3e-58
Identity = 157/468 (33.55%), Postives = 235/468 (50.21%), Query Frame = 0


Query: 202 SSSSSGSERFAAAEAGPE---IGNGSSRNPSYHHHQGSGSENERGEEESFELLSVLMACV 261
           SSSSS  +  A     P    I + S+   + HH                 L  +L    
Sbjct: 7   SSSSSSEDATATTTENPPPLCIASSSAATSASHH-----------------LRRLLFTAA 66

Query: 262 EAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRVSR-----------VW 321
             +   N T   +L+  L   +SP G S   RL+  +T+AL+VR++R            W
Sbjct: 67  NFVSQSNFTAAQNLLSILSLNSSPHGDS-TERLVHLFTKALSVRINRQQQDQTAETVATW 126

Query: 322 ---------PQVFHVRPPREY------NRIDDDTGIALRLLNEVSPIPKFIYFTANEMLL 381
                      VF     +E       N   D        LN+++P  +F + TAN+ +L
Sbjct: 127 TTNEMTMSNSTVFTSSVCKEQFLFRTKNNNSDFESCYYLWLNQLTPFIRFGHLTANQAIL 186

Query: 382 RAFEGKDK--VHIIDFDIKEGLQWPSLFQSLASR----VNPPSHVRITGIGESKQELNET 441
            A E  D   +HI+D DI +GLQWP L Q+LA R     +PP  +RITG G     LN T
Sbjct: 187 DATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTGLNRT 246

Query: 442 GDRLAGFAEALRLPFEFHAVVDRLED-------VRLWMLHVKENESVGVNCILQLHKTLY 501
           GDRL  FA++L L F+FH +V   ED       +RL  L   + E++ VNC+  LHK   
Sbjct: 247 GDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFN 306

Query: 502 DNNINGGGGALKDFLGLIRSTNPRIVVMAEQEAEHNDPRLETRVAATIKYYGAIFDSLDT 561
           D+     G  +  FL  I+S N RIV MAE+EA H D     R +  + +Y AIFDSL+ 
Sbjct: 307 DD-----GDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEA 366

Query: 562 SLPPNSSGRLKIEE-MFGREIRNMIGCEGRERYERHVGFEKWKKVMEKQGGLRC-VGIRD 621
           +LPPNS  RL +E+  FG+EI +++  E  ER +RH  FE W+++M++ G +   +G   
Sbjct: 367 TLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIG--- 426

Query: 622 DRELLQSQILLKMYSSADGFNVRKIGEGGAQAVCLAWEEQPLYSVSGW 626
              L Q+++LL+++  ++G+N++ +      ++ L W+ +PL+SVS W
Sbjct: 427 SFALSQAKLLLRLHYPSEGYNLQFLN----NSLFLGWQNRPLFSVSSW 444

[Close]

BLAST of CmaCh16G010040 vs. TAIR 10
Match: AT1G66350.1 (RGA-like 1 )

HSP 1 Score: 223.4 bits (568), Expect = 5.1e-58
Identity = 132/384 (34.38%), Postives = 205/384 (53.39%), Query Frame = 0


Query: 244 EEESFELLSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRV 303
           +E    L+  L+AC EA++  N+ L + L++ +G  AS +  + + ++  Y+ E LA R+
Sbjct: 146 QETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGA-MRKVATYFAEGLARRI 205

Query: 304 SRVWPQVFHVRPPREYNRIDDDTGIALRLLNEVSPIPKFIYFTANEMLLRAFEGKDKVHI 363
            R++P     R     +   D   I      E  P  KF +FTAN+ +L  F   +KVH+
Sbjct: 206 YRIYP-----RDDVALSSFSDTLQIH---FYESCPYLKFAHFTANQAILEVFATAEKVHV 265

Query: 364 IDFDIKEGLQWPSLFQSLASRVNPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEF 423
           ID  +  GLQWP+L Q+LA R N P   R+TGIG S  ++ E G +L   A  + + FEF
Sbjct: 266 IDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEF 325

Query: 424 HAV-VDRLEDVRLWMLHVKEN-ESVGVNCILQLHKTLYDNNINGGGGALKDFLGLIRSTN 483
            ++ ++ L D++  ML ++   ESV VN + +LH+ L         G++  FL  I+S  
Sbjct: 326 KSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLL------AHPGSIDKFLSTIKSIR 385

Query: 484 PRIVVMAEQEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNSSGRLKIEEMFGREIRN 543
           P I+ + EQEA HN      R   ++ YY ++FDSL+    P S  R+  E   GR+I N
Sbjct: 386 PDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLE---GPPSQDRVMSELFLGRQILN 445

Query: 544 MIGCEGRERYERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQSQILLKMYSSADGFNVRK 603
           ++ CEG +R ERH    +W+      GG + V I       Q+ +LL +Y+ ADG+NV +
Sbjct: 446 LVACEGEDRVERHETLNQWRNRF-GLGGFKPVSI-GSNAYKQASMLLALYAGADGYNVEE 505

Query: 604 IGEGGAQAVCLAWEEQPLYSVSGW 626
             EG    + L W+ +PL + S W
Sbjct: 506 -NEG---CLLLGWQTRPLIATSAW 505

[Close]

BLAST of CmaCh16G010040 vs. TAIR 10
Match: AT2G01570.1 (GRAS family transcription factor family protein )

HSP 1 Score: 216.1 bits (549), Expect = 8.2e-56
Identity = 151/486 (31.07%), Postives = 246/486 (50.62%), Query Frame = 0


Query: 151 PDGDEGLCFLPGSSTSPFMSEIADLGEGNDGESSQVKAQDSSDSVSGSDSGSSSSSGSER 210
           P  D  L  +PG++   F +   D    ++ ++ ++K+  S DS+      +S+S+G+  
Sbjct: 132 PASDYDLKVIPGNAIYQFPA--IDSSSSSNNQNKRLKSCSSPDSMV-----TSTSTGT-- 191

Query: 211 FAAAEAGPEIGNGSSRNPSYHHHQGSGSEN---ERGEEESFELLSVLMACVEAIRSKNIT 270
               + G  IG   +   +     G  + +      +E    L+  LMAC EAI+  N+T
Sbjct: 192 ----QIGGVIGTTVTTTTTTTTAAGESTRSVILVDSQENGVRLVHALMACAEAIQQNNLT 251

Query: 271 LINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQVFHVRPPREYNRIDDDTG 330
           L   L++++G  A  +  + + ++  Y+ EALA R       ++ + PP+  N+ID    
Sbjct: 252 LAEALVKQIGCLAVSQAGA-MRKVATYFAEALARR-------IYRLSPPQ--NQIDHCLS 311

Query: 331 IALRL-LNEVSPIPKFIYFTANEMLLRAFEGKDKVHIIDFDIKEGLQWPSLFQSLASRVN 390
             L++   E  P  KF +FTAN+ +L AFEGK +VH+IDF + +GLQWP+L Q+LA R  
Sbjct: 312 DTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREG 371

Query: 391 PPSHVRITGIG----ESKQELNETGDRLAGFAEALRLPFEFHA-VVDRLEDVRLWMLHVK 450
            P   R+TGIG    ++   L+E G +LA  AEA+ + FE+   V + L D+   ML ++
Sbjct: 372 GPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELR 431

Query: 451 --ENESVGVNCILQLHKTLYDNNINGGGGALKDFLGLIRSTNPRIVVMAEQEAEHNDPRL 510
             + E+V VN + +LHK L      G  G ++  LG+++   P I  + EQE+ HN P  
Sbjct: 432 PSDTEAVAVNSVFELHKLL------GRPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVF 491

Query: 511 ETRVAATIKYYGAIFDSLDTSLPPNSSGRLKIEEMFGREIRNMIGCEGRERYERHVGFEK 570
             R   ++ YY  +FDSL+    PNS  ++  E   G++I N++ CEG +R ERH    +
Sbjct: 492 LDRFTESLHYYSTLFDSLEG--VPNSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQ 551

Query: 571 WKKVMEKQGGLRCVGIRDDRELLQSQILLKMYSSADGFNVRKIGEGGAQAVCLAWEEQPL 626
           W       G              Q+ +LL +++S  G+ V    E     + L W  +PL
Sbjct: 552 WGNRFGSSG--LAPAHLGSNAFKQASMLLSVFNSGQGYRV----EESNGCLMLGWHTRPL 580

The following BLAST results are available for this feature:

BLAST of CmaCh16G010040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAN3	3.2e-166	50.73	Scarecrow-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1	[more]
Q9LWU9	7.6e-107	40.32	Protein DWARF AND LOW-TILLERING OS=Oryza sativa subsp. japonica OX=39947 GN=DLT ...	[more]
A0A145P7T2	3.3e-62	34.59	GRAS family protein RAM1 OS=Lotus japonicus OX=34305 GN=RAM1 PE=1 SV=1	[more]
A0A0M4FMK2	4.8e-61	34.45	GRAS family protein RAM1 OS=Petunia hybrida OX=4102 GN=RAM1 PE=2 SV=1	[more]
G7L166	1.8e-60	32.92	GRAS family protein RAM1 OS=Medicago truncatula OX=3880 GN=RAM1 PE=1 SV=1	[more]

BLAST of CmaCh16G010040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63100.1	2.3e-167	50.73	GRAS family transcription factor	[more]
AT1G50420.1	2.1e-59	31.98	scarecrow-like 3	[more]
AT1G55580.1	2.3e-58	33.55	GRAS family transcription factor	[more]
AT1G66350.1	5.1e-58	34.38	RGA-like 1	[more]
AT2G01570.1	8.2e-56	31.07	GRAS family transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 251..626 e-value: 1.4E-119 score: 399.4
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 6..628
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 241..626 score: 82.343521
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..244
IPR030027	SCL28-like	PANTHER	PTHR31636:SF16	SCARECROW-LIKE PROTEIN 28	coord: 6..628

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G010040.1	CmaCh16G010040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding