CmaCh16G007980 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G007980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Location	Cma_Chr16: 4415799 .. 4419126 (+)
RNA-Seq Expression	CmaCh16G007980
Synteny	CmaCh16G007980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGATCAGCACCCAAACAACCACGTTATATAGTCTCCTTCCTCTTATTCGTTGCAACTCGGAGTAACATCGTCTGGCAACTCAGTTTCTCCCGAGTCGTCATTTCATTCCAACGCGGCCATGGCTTCCGTCCACGCCATAGCTCCTCAGAGGTTCACTTCCTTCATTACAGAAAAACGAGCCTGTCTACGCGCCGCTCCCAATTTCCACGCGTTGAAGCTTCCGCAGCGTTCAATTTTCTCGAGAAATGGGCAGAAGTTGAGTTGGGCGTTGAACTCGGCGGTGGAAGAGCTCGATGTTATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGAGTGGCGGTGAGCCGGGTGGAGAGGGAGAGCGTGGAGGGAGAGATGGGGAGTGCGGTAGGTGGATTCGGCGAGCTCTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGGTACTGTTAGAGATGGCGGTGTAACAGAGAGCGGGGAGAGTGAGAAGGTCATAATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCTTATGCTATCACGAAGTTGCTCACCATCGATCAAGATTATTGGCATGTGAGTCATACTTTTCAATTGCTTCAATTCAATAGTTTTCTGTGTTTACTTGGGATAGAATGTTGGTTGGTTCAAATGGAAAAGCTGTAAAGAGTTTCATGATTTGGGAAGAAGAAATGCAACTTAAATTGCTATAGAAAAGAAGTTGTAGAGTCACATTCTTTTTTGGATCAATCACCAGGAAGCACCCAAAAGCACTCGCAAGCACTCCCTAACACGTTCTATATCTCAAAATCCTTAAAGATTGAGCTCCCGCATTTCATGGCCCATGCTATACAATAGTGATCCTAATAATTCCCCAAACTCCAGTAATTCGAGCTATTCGTGAAGAGGCTAAAAACACAATCCGGGTGTTTTTAGTCACTCAAGATGTTCAGCACTTGGACAATGGTCTAAATGAGTGCGTTGATGTGTAATCTTAGAGTAACTTACGCTTCAAACATGTCATCTCTAGACACCATTCTAATTCTCTTTCCTTCCAACCTCTAGGGATGGACACTTTTTGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACACACCCAGTTCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCGCAGGTAAACTCATACATACCATCAAATTTTTGCATCCCATAATATCTTCTCTTTGTATGCCCATGTAAATGATTTTTCTCATTTTTAAGTTTCTTCTCATAGTGTGTCGAAGGAAAACCTCTATTCGAATTTGATCGTACACGCATGTTCAGATCAGGCCTTGTTGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGTATGTATGCCTTCTGAATTTTATTCCTTGTGTTTTGATTTCAAGATGTTTCCTTACCTTAACATGAACTTCATTTTGTTTGAGTTGTAGAAAAGTTTTTCAGTCTCATTACTTCCCGTTTAAGAAGAAATCATCTGTGTTGTGTTTTGCAGGGTCTTTTTCCTTTTCAAGATTGGTGGGTAGTTCCTGCTAAAGTAGCATTCGATCAAACGGCATGGTCAGCAGTTTGGAACAGTATTTATTTTGTGGTATTAGGATTCCTACGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAGGGCGACATTTTGGCCTATGCTTACCGTAAGAGATTCTATTCTTTTCTTGAATCTTCACACTTCTATGAGTTAGTTGAAATAAGACAGCACATTGGGTTCCCGTTTCTTGTTCTAACTATTGTTGGGAAGTCATTTTCTGCCTTAGACTATCCCTTATCAATATGATTCATTTCTCGTCGTACATTTTTCGTCTTCTGAACTTTCTCGTTCTTGGTTCTTTCGTATGTAGTAAGTTTAACATACGCACACTAGTTTTTTGGTCACCTTTCCCCTATGGTTGACCCTTGATTTAATTGTGACTTCAGTTTTTCATACATACGAAGAAACAATCAATATCATGAGAGTTTGAATCTAACTTTTATTCACACCATAGCAACTATGAAAATCTCATTACCAGAAGTTTGAAGACTATCAGTGCTTTTCAATTGAATTTGATGTTGGTTTGAATGGACGTTCTTTTATTCTCTGAGTTTAATTTTGGATTTTTGTTTTATCCAGGCGGGTTGGAAACTTTGGCCATTTGCTCATCTTATCACATACGGTGTTGTTCCTGTAGAACAAAGACTCCTCTGGGTTGATTGTGTGGAGCTTATCTGGGTGACCATACTCTCCACGTAAGCATATAGTAATATCATTCAGTTAGTCATTTTATATTATGTTTTAATATATCTCTTTAGGAGTGAGCATAATGCAAGTGAAATGGTGTTGAGCGACATACTTTCCTGGGAGCTAGTTGTCTCCTAACCTTTGCCAATTTATCTGATTGATAGTTATTCGAACGAGAAATCGGAGGCTAGAATCTCTGAGGTAGCTACAGATTCCGGTTCGGATTCTCTTTCAAAAGATTCAACTCAGGTATTTTGGTCTTAGAACTCTTGATCGACCATTTTATCTAATATCCCTGACTGGACTAACCATTTCCGTTGAACTTTTCTTTGGTTTTATCAGGGCTAAGCTGACAGGAAAAACCATGAAATATGTGTTGTTCACTTCAACTCTGAGAATCTGAAGAGAAAGATTCACTCCGGAGCATTTACGATCGTACACGTATAAACATGATTCGAGCTGCAAATCTTGATTGTTGTACATTGTGTAGAAATTTCTGAACATTATTGTAGATGAACACTTAACACGTTTTCTTTTTGCGTTTGATAGCTTTTCATCAACTGTATAAATATAGTGAAATATATAGAATCTTGTACTTCCATTGGCTCTTCAAGCCTTGTCCATGGTGCCAACGATCAGAAGCTGCAGAAAAACTTCTTTTAAGTTCATTCACCATCAATTCTTCCAGAAAAAACTGCTGTGGGGTTAAGTGAGTTGAAGAAGAACCACCCTGGATTGGCTAAAAGGTACAAGCTACACTTTTGATCTTGTCTAGATTATAGTTTAAGCTTATGCTTTAAGATATTAGGTGAGCGCTAAAGGCCGTAGAAGGGGGTTAGTTTACAAGCAAGTCGATCATTTACGAGTTGTTCATGATTATAGCTGGGTGAAAAGTCCGTTTTACTCCTGTAGTTACATCTTTCACCTTAAGTACCATTAATTCTCTAATAAACAATTTGTTTATGATCCAATCAT

mRNA sequence

CCAGATCAGCACCCAAACAACCACGTTATATAGTCTCCTTCCTCTTATTCGTTGCAACTCGGAGTAACATCGTCTGGCAACTCAGTTTCTCCCGAGTCGTCATTTCATTCCAACGCGGCCATGGCTTCCGTCCACGCCATAGCTCCTCAGAGGTTCACTTCCTTCATTACAGAAAAACGAGCCTGTCTACGCGCCGCTCCCAATTTCCACGCGTTGAAGCTTCCGCAGCGTTCAATTTTCTCGAGAAATGGGCAGAAGTTGAGTTGGGCGTTGAACTCGGCGGTGGAAGAGCTCGATGTTATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGAGTGGCGGTGAGCCGGGTGGAGAGGGAGAGCGTGGAGGGAGAGATGGGGAGTGCGGTAGGTGGATTCGGCGAGCTCTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGGTACTGTTAGAGATGGCGGTGTAACAGAGAGCGGGGAGAGTGAGAAGGTCATAATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCTTATGCTATCACGAAGTTGCTCACCATCGATCAAGATTATTGGCATGGATGGACACTTTTTGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACACACCCAGTTCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCGCAGTGTGTCGAAGGAAAACCTCTATTCGAATTTGATCGTACACGCATGTTCAGATCAGGCCTTGTTGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGGTCTTTTTCCTTTTCAAGATTGGTGGGTAGTTCCTGCTAAAGTAGCATTCGATCAAACGGCATGGTCAGCAGTTTGGAACAGTATTTATTTTGTGGTATTAGGATTCCTACGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAGGGCGACATTTTGGCCTATGCTTACCGCGGGTTGGAAACTTTGGCCATTTGCTCATCTTATCACATACGGTGTTGTTCCTGTAGAACAAAGACTCCTCTGGGTTGATTGTGTGGAGCTTATCTGGGTGACCATACTCTCCACTTATTCGAACGAGAAATCGGAGGCTAGAATCTCTGAGGTAGCTACAGATTCCGGTTCGGATTCTCTTTCAAAAGATTCAACTCAGGGCTAAGCTGACAGGAAAAACCATGAAATATGTGTTGTTCACTTCAACTCTGAGAATCTGAAGAGAAAGATTCACTCCGGAGCATTTACGATCGTACACGTATAAACATGATTCGAGCTGCAAATCTTGATTGTTGTACATTGTGTAGAAATTTCTGAACATTATTGTAGATGAACACTTAACACGTTTTCTTTTTGCGTTTGATAGCTTTTCATCAACTGTATAAATATAGTGAAATATATAGAATCTTGTACTTCCATTGGCTCTTCAAGCCTTGTCCATGGTGCCAACGATCAGAAGCTGCAGAAAAACTTCTTTTAAGTTCATTCACCATCAATTCTTCCAGAAAAAACTGCTGTGGGGTTAAGTGAGTTGAAGAAGAACCACCCTGGATTGGCTAAAAGGTACAAGCTACACTTTTGATCTTGTCTAGATTATAGTTTAAGCTTATGCTTTAAGATATTAGGTGAGCGCTAAAGGCCGTAGAAGGGGGTTAGTTTACAAGCAAGTCGATCATTTACGAGTTGTTCATGATTATAGCTGGGTGAAAAGTCCGTTTTACTCCTGTAGTTACATCTTTCACCTTAAGTACCATTAATTCTCTAATAAACAATTTGTTTATGATCCAATCAT

Coding sequence (CDS)

ATGGCTTCCGTCCACGCCATAGCTCCTCAGAGGTTCACTTCCTTCATTACAGAAAAACGAGCCTGTCTACGCGCCGCTCCCAATTTCCACGCGTTGAAGCTTCCGCAGCGTTCAATTTTCTCGAGAAATGGGCAGAAGTTGAGTTGGGCGTTGAACTCGGCGGTGGAAGAGCTCGATGTTATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGAGTGGCGGTGAGCCGGGTGGAGAGGGAGAGCGTGGAGGGAGAGATGGGGAGTGCGGTAGGTGGATTCGGCGAGCTCTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGGTACTGTTAGAGATGGCGGTGTAACAGAGAGCGGGGAGAGTGAGAAGGTCATAATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCTTATGCTATCACGAAGTTGCTCACCATCGATCAAGATTATTGGCATGGATGGACACTTTTTGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACACACCCAGTTCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCGCAGTGTGTCGAAGGAAAACCTCTATTCGAATTTGATCGTACACGCATGTTCAGATCAGGCCTTGTTGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGGTCTTTTTCCTTTTCAAGATTGGTGGGTAGTTCCTGCTAAAGTAGCATTCGATCAAACGGCATGGTCAGCAGTTTGGAACAGTATTTATTTTGTGGTATTAGGATTCCTACGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAGGGCGACATTTTGGCCTATGCTTACCGCGGGTTGGAAACTTTGGCCATTTGCTCATCTTATCACATACGGTGTTGTTCCTGTAGAACAAAGACTCCTCTGGGTTGATTGTGTGGAGCTTATCTGGGTGACCATACTCTCCACTTATTCGAACGAGAAATCGGAGGCTAGAATCTCTGAGGTAGCTACAGATTCCGGTTCGGATTCTCTTTCAAAAGATTCAACTCAGGGCTAA

Protein sequence

MASVHAIAPQRFTSFITEKRACLRAAPNFHALKLPQRSIFSRNGQKLSWALNSAVEELDVIPVQSADFTDQQEGVAVSRVERESVEGEMGSAVGGFGELSLGGAGEIQGFSSSGTVRDGGVTESGESEKVIIDRIINATIVLAAGSYAITKLLTIDQDYWHGWTLFEILRYAPQHNWSAYEEALKTHPVLAKMVISGVVYSLGDWIAQCVEGKPLFEFDRTRMFRSGLVGFSLHGSLSHYYYHFCEGLFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNELRATFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEVATDSGSDSLSKDSTQG

Homology

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BLAST of CmaCh16G007980 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3)

HSP 1 Score: 90.9 bits (224), Expect = 3.3e-17
Identity = 48/176 (27.27%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 173 PQHNWSAYEEALKTHPVLAKMVISGVVYSLGDWIAQCVEGKPLFE-----FDRTRMFRSG 232
           P+   S Y   L+ +PVL K   SG++ +LG+++AQ +E K   E      D +   R  
Sbjct: 18  PRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYA 77

Query: 233 LVGFSLHGSLSHYYYHFCEGLFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLES 292
           + GF   G L H++Y   E   P +       ++  D+  ++  + S++F+V+ FL  + 
Sbjct: 78  IYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFLEGQD 137

Query: 293 PVSIFNELRATFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILST 344
             +   ++++ FWP L   W++W     I    +PV+ R+L+ + V L W   L++
Sbjct: 138 TAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYLAS 193

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BLAST of CmaCh16G007980 vs. ExPASy Swiss-Prot
Match: Q754F0 (Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.2e-16
Identity = 52/176 (29.55%), Postives = 84/176 (47.73%), Query Frame = 0


Query: 180 YEEALKTHPVLAKMVISGVVYSLGDWIAQCVEGKPLFEFDRTRMFRSGLVGFSLHGSLSH 239
           Y+ +L++HP     + +G ++ LGD +AQ    +P   +D  R  R  L G  L   +  
Sbjct: 8   YKASLQSHPKRTNALTTGFLFGLGDIVAQTQFPEPGASYDPMRTLRPFLYGAVLFSLVGD 67

Query: 240 YYYHFCE----GLFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNEL 299
            +Y F      G  P   W  V A+VA DQ  ++ +   +Y+  +  +   S   +   L
Sbjct: 68  KWYRFLSTVRLGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALMEGGSLEDVRIRL 127

Query: 300 RATFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSEA 352
              +W  L A W +WP   L  + +VPV+ RLL V+ + + W T LS YSN  + +
Sbjct: 128 SEKWWSTLLANWIVWPAFQLCNFSLVPVQHRLLTVNVLSIFWNTYLS-YSNSTASS 182

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BLAST of CmaCh16G007980 vs. ExPASy Swiss-Prot
Match: Q6CAW5 (Protein SYM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.8e-14
Identity = 49/176 (27.84%), Postives = 85/176 (48.30%), Query Frame = 0


Query: 176 NWSAYEEALKTHPVLAKMVISGVVYSLGDWIAQ-CVEGKPLFEFDRTRMFRSGLVGFSLH 235
           NW  Y   L+ +P    +  +  ++ +GD ++Q     KP   ++  R  R+G+   +  
Sbjct: 2   NW--YVRLLQKYPYRMAVTSTSSLFMIGDCVSQRYFSDKP---YEPMRTARAGIYACAFA 61

Query: 236 GSLSHYYYHFCEGLFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNE 295
            +++ ++    +   P      V AKVA DQ  ++      YF V+G L  +SP +I+  
Sbjct: 62  PAMTAWFRFLGQQQLP------VIAKVAIDQAVFAPSSIGYYFSVMGLLEGKSPDTIWQS 121

Query: 296 LRATFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSE 351
           L+  +W  L  GW +WP   L  +G+VP   R+L  +C  L+W T L+  +  K E
Sbjct: 122 LKNQYWDTLKCGWMIWPAFQLFNFGIVPPNFRVLASNCCGLVWNTFLAYQNANKME 166

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BLAST of CmaCh16G007980 vs. ExPASy Swiss-Prot
Match: Q7SCY7 (Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=sym-1 PE=3 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-12
Identity = 45/168 (26.79%), Postives = 86/168 (51.19%), Query Frame = 0


Query: 178 SAYEEALKTHPVLAKMVISGVVYSLGDWIA-QCVEGKPLFEFDRTRMFRSGLVGFSLHGS 237
           S Y+  L   P+L + V + +++ +GD  A Q V+ + L   D TR  R  L G ++ G 
Sbjct: 3   SWYKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFGP 62

Query: 238 LSHYYYHFCEG--LFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNE 297
            +  ++ F +   + P      + A+VA DQ  ++  +  I+   LG + +     +  +
Sbjct: 63  AATTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIF---LGSMAVLEGTDVKEK 122

Query: 298 LRATFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILS 343
           L+  +W  L+  W +WPF  ++ + VVP++ R+L+V+ + + W   LS
Sbjct: 123 LQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLS 167

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BLAST of CmaCh16G007980 vs. ExPASy Swiss-Prot
Match: Q06563 (Protein SYM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SYM1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-12
Identity = 48/176 (27.27%), Postives = 79/176 (44.89%), Query Frame = 0


Query: 180 YEEALKTHPVLAKMVISGVVYSLGDWIAQCV--EGKPLFEFDRTRMFRSGLVGFSLHGSL 239
           YE +LK  P     +++G ++ +GD  AQ +    K    +D  R  R+ + G  +   +
Sbjct: 7   YEASLKRRPKTTNAIMTGALFGIGDVSAQLLFPTSKVNKGYDYKRTARAVIYGSLIFSFI 66

Query: 240 SHYYYHFCEGLF-----PFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIF 299
              +Y            P   W  +  +VA DQ A++ +    YF  +  +   S     
Sbjct: 67  GDKWYKILNNKIYMRNRPQYHWSNMVLRVAVDQLAFAPLGLPFYFTCMSIMEGRSFDVAK 126

Query: 300 NELRATFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEK 349
            +++  +WP L   W +WP    I + VVP++ RLL V+ V + W T LS Y N K
Sbjct: 127 LKIKEQWWPTLLTNWAVWPLFQAINFSVVPLQHRLLAVNVVAIFWNTYLS-YKNSK 181

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BLAST of CmaCh16G007980 vs. TAIR 10
Match: AT1G52870.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 456.1 bits (1172), Expect = 2.8e-128
Identity = 236/337 (70.03%), Postives = 265/337 (78.64%), Query Frame = 0


Query: 31  ALKLPQRSIFSRNGQKLSWALNSAVEELDVIPVQSADFTDQQEGVAVSRVERESVEGEMG 90
           +LK  +  I  RN Q+   +     +E+D+IPVQS D TD +EG  V      +V+G   
Sbjct: 22  SLKPHRSQILLRNKQRNCVSCALIRDEIDLIPVQSRDRTDHEEGSVVVMSTETAVDGN-E 81

Query: 91  SAVGGFGELSLGGAGEIQGF-SSSGTVRDGGVTESGESEKV--IIDRIINATIVLAAGSY 150
           S V GF   +  G   ++GF SSS +  D G  +  E+E++  +IDR INATIVLAAGSY
Sbjct: 82  SVVVGFSAATSEGQLSLEGFPSSSSSGADLGDEKRRENEEMEKMIDRTINATIVLAAGSY 141

Query: 151 AITKLLTIDQDYWHGWTLFEILRYAPQHNWSAYEEALKTHPVLAKMVISGVVYSLGDWIA 210
           AITKLLTID DYWHGWTLFEILRYAPQHNW AYEEALK +PVLAKMVISGVVYS+GDWIA
Sbjct: 142 AITKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNPVLAKMVISGVVYSVGDWIA 201

Query: 211 QCVEGKPLFEFDRTRMFRSGLVGFSLHGSLSHYYYHFCEGLFPFQDWWVVPAKVAFDQTA 270
           QC EGKPLFE DR R  RSGLVGF+LHGSLSH+YY FCE LFPFQDWWVVP KVAFDQT 
Sbjct: 202 QCYEGKPLFEIDRARTLRSGLVGFTLHGSLSHFYYQFCEELFPFQDWWVVPVKVAFDQTV 261

Query: 271 WSAVWNSIYFVVLGFLRLESPVSIFNELRATFWPMLTAGWKLWPFAHLITYGVVPVEQRL 330
           WSA+WNSIYF VLGFLR ESP+SIF EL+ATF PMLTAGWKLWPFAHLITYG+VPVEQRL
Sbjct: 262 WSAIWNSIYFTVLGFLRFESPISIFKELKATFLPMLTAGWKLWPFAHLITYGLVPVEQRL 321

Query: 331 LWVDCVELIWVTILSTYSNEKSEARISEVATDSGSDS 365
           LWVDCVELIWVTILSTYSNEKSEARISE   ++ S S
Sbjct: 322 LWVDCVELIWVTILSTYSNEKSEARISESVIETSSSS 357

[Close]

BLAST of CmaCh16G007980 vs. TAIR 10
Match: AT4G03410.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 398.3 bits (1022), Expect = 6.9e-111
Identity = 181/234 (77.35%), Postives = 204/234 (87.18%), Query Frame = 0


Query: 131 IIDRIINATIVLAAGSYAITKLLTIDQDYWHGWTLFEILRYAPQHNWSAYEEALKTHPVL 190
           ++ R INA IVLAAG+ A+TKLLTID DYW GWTL+EILRYAP+HNW AYE+ LKT+PVL
Sbjct: 82  LMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAYEQILKTNPVL 141

Query: 191 AKMVISGVVYSLGDWIAQCVEGKPLFEFDRTRMFRSGLVGFSLHGSLSHYYYHFCEGLFP 250
           AKM ISG+VYSLGDWIAQC EGKPLFEFDRTR+ RSGLVGF+LHGSLSHYYY FCE LFP
Sbjct: 142 AKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQFCEALFP 201

Query: 251 FQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNELRATFWPMLTAGWKLW 310
           FQ+WWVVPAKVAFDQT WSA+WNSIYF VLG LR +SP  IF+E++ TF PMLTAGWKLW
Sbjct: 202 FQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTAGWKLW 261

Query: 311 PFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEVATDSGSDS 365
           P AHL+TYGV+PV+QRLLWVDC+ELIWVTILSTYSNEK+EA+ SE    S   S
Sbjct: 262 PLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQASEETNSSSHSS 315

[Close]

BLAST of CmaCh16G007980 vs. TAIR 10
Match: AT4G03410.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 398.3 bits (1022), Expect = 6.9e-111
Identity = 181/234 (77.35%), Postives = 204/234 (87.18%), Query Frame = 0


Query: 131 IIDRIINATIVLAAGSYAITKLLTIDQDYWHGWTLFEILRYAPQHNWSAYEEALKTHPVL 190
           ++ R INA IVLAAG+ A+TKLLTID DYW GWTL+EILRYAP+HNW AYE+ LKT+PVL
Sbjct: 82  LMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAYEQILKTNPVL 141

Query: 191 AKMVISGVVYSLGDWIAQCVEGKPLFEFDRTRMFRSGLVGFSLHGSLSHYYYHFCEGLFP 250
           AKM ISG+VYSLGDWIAQC EGKPLFEFDRTR+ RSGLVGF+LHGSLSHYYY FCE LFP
Sbjct: 142 AKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQFCEALFP 201

Query: 251 FQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNELRATFWPMLTAGWKLW 310
           FQ+WWVVPAKVAFDQT WSA+WNSIYF VLG LR +SP  IF+E++ TF PMLTAGWKLW
Sbjct: 202 FQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTAGWKLW 261

Query: 311 PFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEVATDSGSDS 365
           P AHL+TYGV+PV+QRLLWVDC+ELIWVTILSTYSNEK+EA+ SE    S   S
Sbjct: 262 PLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQASEETNSSSHSS 315

[Close]

BLAST of CmaCh16G007980 vs. TAIR 10
Match: AT1G52870.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 355.9 bits (912), Expect = 3.9e-98
Identity = 188/289 (65.05%), Postives = 215/289 (74.39%), Query Frame = 0


Query: 31  ALKLPQRSIFSRNGQKLSWALNSAVEELDVIPVQSADFTDQQEGVAVSRVERESVEGEMG 90
           +LK  +  I  RN Q+   +     +E+D+IPVQS D TD +EG  V      +V+G   
Sbjct: 22  SLKPHRSQILLRNKQRNCVSCALIRDEIDLIPVQSRDRTDHEEGSVVVMSTETAVDGN-E 81

Query: 91  SAVGGFGELSLGGAGEIQGF-SSSGTVRDGGVTESGESEKV--IIDRIINATIVLAAGSY 150
           S V GF   +  G   ++GF SSS +  D G  +  E+E++  +IDR INATIVLAAGSY
Sbjct: 82  SVVVGFSAATSEGQLSLEGFPSSSSSGADLGDEKRRENEEMEKMIDRTINATIVLAAGSY 141

Query: 151 AITKLLTIDQDYWHGWTLFEILRYAPQHNWSAYEEALKTHPVLAKMVISGVVYSLGDWIA 210
           AITKLLTID DYWHGWTLFEILRYAPQHNW AYEEALK +PVLAKMVISGVVYS+GDWIA
Sbjct: 142 AITKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNPVLAKMVISGVVYSVGDWIA 201

Query: 211 QCVEGKPLFEFDRTRMFRSGLVGFSLHGSLSHYYYHFCEGLFPFQDWWVVPAKVAFDQTA 270
           QC EGKPLFE DR R  RSGLVGF+LHGSLSH+YY FCE LFPFQDWWVVP KVAFDQT 
Sbjct: 202 QCYEGKPLFEIDRARTLRSGLVGFTLHGSLSHFYYQFCEELFPFQDWWVVPVKVAFDQTV 261

Query: 271 WSAVWNSIYFVVLGFLRLESPVSIFNELRATFWPMLTAGWKLWPFAHLI 317
           WSA+WNSIYF VLGFLR ESP+SIF EL+ATF PMLT G     F HL+
Sbjct: 262 WSAIWNSIYFTVLGFLRFESPISIFKELKATFLPMLTVG----SFGHLL 305

[Close]

BLAST of CmaCh16G007980 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 79.7 bits (195), Expect = 5.4e-15
Identity = 49/175 (28.00%), Postives = 76/175 (43.43%), Query Frame = 0


Query: 180 YEEALKTHPVLAKMVISGVVYSLGDWIAQCVEGKPLFEFDRTRMFRSGLVGFSLHGSLSH 239
           Y   +K+HPV+ K V S ++Y   D  +Q +       +D  R  R G  G  + G   H
Sbjct: 77  YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136

Query: 240 YYYHFCEGLFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNELRATF 299
           Y+++F   LFP QD      K+A  QT +  +   I+F +   L+ E    I   L+   
Sbjct: 137 YWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDL 196

Query: 300 WPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIS 355
            P L  G   WP    IT+   PV  + L  +    +W   ++  +N +    IS
Sbjct: 197 LPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANREKPVAIS 251

The following BLAST results are available for this feature:

BLAST of CmaCh16G007980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2KIY1	3.3e-17	27.27	Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3	[more]
Q754F0	6.2e-16	29.55	Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NR...	[more]
Q6CAW5	5.8e-14	27.84	Protein SYM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SYM1 ...	[more]
Q7SCY7	1.1e-12	26.79	Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 ...	[more]
Q06563	1.9e-12	27.27	Protein SYM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]

BLAST of CmaCh16G007980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52870.2	2.8e-128	70.03	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G03410.1	6.9e-111	77.35	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G03410.2	6.9e-111	77.35	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT1G52870.1	3.9e-98	65.05	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G14860.1	5.4e-15	28.00	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 281..342 e-value: 4.9E-18 score: 65.1
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 45..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 353..372
None	No IPR available	PANTHER	PTHR11266:SF76	PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN	coord: 45..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G007980.1	CmaCh16G007980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane