
CmaCh16G005110 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGAAAATCAATATCTAATCTATCATTAAATTCGCACTGGAAATTACTCTCCACTTCAGTTCCATTGGTTTGCTTTGCTTAGCATTTGGATAATCAATAATCTGTACACCAAGAAAGGAGCTCCATTTCCACGTCTCTGTTCTGCAAGTTACTTTGTCTCTTTCTTCCATCTACTCATCACTATATGCATTCCAATCCCACGCTTTCCCCTTTTTCTTACTTTTACAGTTCTTATTTCTTACTTTTAATCTTACATTAATCTCAAATCTGCGTTTATGGACTCCTTCTAGATCTGTGTTGTTCCAATCTTTGCCTCTTTCGCATTCTTCATGGAGTAAGAATCGGCCTTGGTTGCGAGGAATGGGAGCCAGTGGAAGTAAGTTGTCGAGTAGTTCGCCGCCGCCGCCGCCACCACCGTCGGCGGCGGCGGCGAATCTCTCATGTTCTGGGAGAATCCGGAGGGGGAGATCCAAAGGCCGTAGAGTTTTCCAGTCTGCTTGCCTCGGTACCCCCTCTGGATCGCACCACAGCGACAATGACGATAATGTACGTGATTTCCCCCCCTTTTTTGAGATGGAAAGTTGGTTTTTGTTATTGTCTTATTGATGATACTGATTCAATGGGGTGGGCGGAGAAAGATTGTTGAGATTCAAATTTCTGCATCTTTGTGGGGTTTTTTTAGGTTTAGCCGTCGATATTTTACTTGTGGGTTGTATGAAATTTTTTGATCACGAGTGCCAAATCATAAATAAACTGAGCTATGCTTCATTATAACTCGTATGAATGAGCCCTTTTGATGAGTTTTCTGAGTTAATTCGAAGCATTTTTCCATGGTGAAGTGAACTTATTTAGTTATTTGATTTTCTGATGTGCAGTCTGAAATCTTACTAATGTTAATTAAGTTATCCTGGTTTATGAATCATTCTGCAGGATTGTAAAAGTGAGAACAAAAAGAATGCTCATGATTATTCATCTGCAAATCAGACTGATCAAGCTAATGATCAGATGAAAATTGAGGGTTACAGAAGGGTCAAAGCTGAGGAATCTCTTGAAATGCCTTGCGTATCATCAAATGTTGAGTTTGATGGATGGGATCAAGCAGGTGTTGCTGTTGCAGCAGCTCCCAGAGCTGGAAGTACCTCTGCTCGTGTATCGTCCCTGCAATCGTTGAACCCTTCGAGTAGCTTCCTTTCTCGCTTTAGTTTCATTCCTGGTAATATAAGCTTCAGACTTAGTAGAGCAAGCAGTTTAGGATCGTCTAGATCTTTTCCTGTGTCTTCAACAAATCTTTCAATGTTGAACGATGAAGCCGAGCTTCATTTATCAGACAGACCTGCTGGAGGCTTGGGTGCTCAAGATGAAACTCAGCAAGGTAGTGACTTGCTTCCTGCGTCGCTGGCTAGTGCAACTCGTGCTCAATGTTATGGAGATAGTCCTGCCAATTTTAGGCTAGATACACAAAATCTGAGTCTTTCTGATAACTTACAAGACAATCAGTCAGTTGGAAACCTTTCCCATGCTCAAACTCTACCTGAAAATGAAAGCAGTGAGATTAGACAATCTGACAGGCGGACTGGATCTAGGGAACCGGTTGAACGCAATTTTCGTTTCAGTCGGACCCTTAGTGTTGGAAGACTGCGTGATAGAGTTCTTCGTAGATCATCATTGTCTGATTTCACATTTTGTCCTCCACAACAAGATGGTGAAGAGAGAGATGCAAGTCACAGTGGTGATGGTGGACATGTCTGGACTGCTGAGACGAGGGCGTTGGCATCTGTAGATAATGCTATGACCTCGCCAACAACATCGGGTTATCCAGCTTCTAGTCTATCCAGTTCGTTGTTCAGCACCCAAGGTTTTGAAATGGAAACTACACGACCTAGAGAAGCTAGATATCATGATCTGCTGGAACACAGATCAAATTTCCTCGAACGGAGAAGACGAATACGGTCCCAGGTTTTGTAATTATTCTTGATGGAGTTCATTTTTACGCTATGGTAGATAGGCAATAGTATATAGTTAGTGTAATGTTTGGTCATATTTCATAATATTGCACCTTACGGGCAGGGGCCGGTACAAAACTGATTCTAGGTATCTCTTATTCTTTTTTCTCTCTTAATCCACTTTCATGCAGGTTCGTGCCTTACAGCGGTTGGGAAGTCGCTTTGAGAACCTATCTGGTCATGAGAGATCGTGCATATTATCCGGTCAACATAGAACCAGTCATTGTACTTGTCGTATCAACAATCGTGACACAAATGTAAGCGATAACACGAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTAAACTCATATATTATCACCTTCTCTGCTTAGTTTCCTCACATTTTATCTATACTAGTTGAATCTCTGTACTCATTTTAATTAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCCTCCCGCCCTGCGTCTTCTTTTGGCTCTCTGCCTGCTCCGAACGCTGTTGTAGATTCTTTGCCTGTTAAATTTCATTCCAAGTTGCAAAAGCATCAAAACGAGGAAGCTGCCCAGTAAGCATTTACCTTTACTTCTATTTTCTATGCACTCTATTGCGTGTACGATTGAACGCTTCTTTCGTGTTTAAGACATTCTTACCACATATATTCATTAAGTTTATGCCAACCTCTTCTTTCCCTTTTCGCACAAACTGTTTCATGTCTTATCTCGACGTGTGTCTGATGTGTTCTTGTGTAACCGCTCTCCGTATTATGAATCTACAGATGCTACATATGCCTGGTCGAGTACGAGGAAGGGGATAGCATGAGAGTGTTGCCTTGCCATCATGAATTTCACGCAGCATGTGTCGACAAGTGGCTGAAGGAGATCCATAGGTATTATCGGGTCCATGTACCGTTTTCTTGCTTCTTGAACTGTATAAAAATCAGTACATATCATCATACACTAGTCATCTAGTACATATCATACATGGGGTAGGCCTGACTTCACATGATCAATAAATGAATCTTACTATTGACTCGGTCGATGCATCCATAACTCGATCGTTCTGACTCGCCTTTGCGTGGTATTATACAGGGTGTGCCCGCTCTGTCGAGGGGACATATGCAGCAGATCTGATGTGTTATCAGACGATGTTAAGTGAAAACAATTCGTTTCCATCCAAAACGTGCTGTCTTCTGTGTATGCTTAGAAATCGAGTGATGACTGCTAGCTAGAAAATTGTAAGGGTTTGAAAATGATGATGAAATATCCAGGTTTTTTGTTCTATAAGGATGAACTTGCTAGACTGTTGTATGTAATGGGAGTGGAGGATTCAGCAGTTGAGAAATATATTAGCCTTTTTTTCTTTCTTATTTCTAA CTGAAAATCAATATCTAATCTATCATTAAATTCGCACTGGAAATTACTCTCCACTTCAGTTCCATTGGTTTGCTTTGCTTAGCATTTGGATAATCAATAATCTGTACACCAAGAAAGGAGCTCCATTTCCACGTCTCTGTTCTGCAAGTTACTTTATCTGTGTTGTTCCAATCTTTGCCTCTTTCGCATTCTTCATGGAGTAAGAATCGGCCTTGGTTGCGAGGAATGGGAGCCAGTGGAAGTAAGTTGTCGAGTAGTTCGCCGCCGCCGCCGCCACCACCGTCGGCGGCGGCGGCGAATCTCTCATGTTCTGGGAGAATCCGGAGGGGGAGATCCAAAGGCCGTAGAGTTTTCCAGTCTGCTTGCCTCGGTACCCCCTCTGGATCGCACCACAGCGACAATGACGATAATGATTGTAAAAGTGAGAACAAAAAGAATGCTCATGATTATTCATCTGCAAATCAGACTGATCAAGCTAATGATCAGATGAAAATTGAGGGTTACAGAAGGGTCAAAGCTGAGGAATCTCTTGAAATGCCTTGCGTATCATCAAATGTTGAGTTTGATGGATGGGATCAAGCAGGTGTTGCTGTTGCAGCAGCTCCCAGAGCTGGAAGTACCTCTGCTCGTGTATCGTCCCTGCAATCGTTGAACCCTTCGAGTAGCTTCCTTTCTCGCTTTAGTTTCATTCCTGGTAATATAAGCTTCAGACTTAGTAGAGCAAGCAGTTTAGGATCGTCTAGATCTTTTCCTGTGTCTTCAACAAATCTTTCAATGTTGAACGATGAAGCCGAGCTTCATTTATCAGACAGACCTGCTGGAGGCTTGGGTGCTCAAGATGAAACTCAGCAAGGTAGTGACTTGCTTCCTGCGTCGCTGGCTAGTGCAACTCGTGCTCAATGTTATGGAGATAGTCCTGCCAATTTTAGGCTAGATACACAAAATCTGAGTCTTTCTGATAACTTACAAGACAATCAGTCAGTTGGAAACCTTTCCCATGCTCAAACTCTACCTGAAAATGAAAGCAGTGAGATTAGACAATCTGACAGGCGGACTGGATCTAGGGAACCGGTTGAACGCAATTTTCGTTTCAGTCGGACCCTTAGTGTTGGAAGACTGCGTGATAGAGTTCTTCGTAGATCATCATTGTCTGATTTCACATTTTGTCCTCCACAACAAGATGGTGAAGAGAGAGATGCAAGTCACAGTGGTGATGGTGGACATGTCTGGACTGCTGAGACGAGGGCGTTGGCATCTGTAGATAATGCTATGACCTCGCCAACAACATCGGGTTATCCAGCTTCTAGTCTATCCAGTTCGTTGTTCAGCACCCAAGGTTTTGAAATGGAAACTACACGACCTAGAGAAGCTAGATATCATGATCTGCTGGAACACAGATCAAATTTCCTCGAACGGAGAAGACGAATACGGTCCCAGGTTCGTGCCTTACAGCGGTTGGGAAGTCGCTTTGAGAACCTATCTGGTCATGAGAGATCGTGCATATTATCCGGTCAACATAGAACCAGTCATTGTACTTGTCGTATCAACAATCGTGACACAAATGTAAGCGATAACACGAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCCTCCCGCCCTGCGTCTTCTTTTGGCTCTCTGCCTGCTCCGAACGCTGTTGTAGATTCTTTGCCTGTTAAATTTCATTCCAAGTTGCAAAAGCATCAAAACGAGGAAGCTGCCCAATGCTACATATGCCTGGTCGAGTACGAGGAAGGGGATAGCATGAGAGTGTTGCCTTGCCATCATGAATTTCACGCAGCATGTGTCGACAAGTGGCTGAAGGAGATCCATAGGGTGTGCCCGCTCTGTCGAGGGGACATATGCAGCAGATCTGATGTGTTATCAGACGATGTTAAGTGAAAACAATTCGTTTCCATCCAAAACGTGCTGTCTTCTGTGTATGCTTAGAAATCGAGTGATGACTGCTAGCTAGAAAATTGTAAGGGTTTGAAAATGATGATGAAATATCCAGGTTTTTTGTTCTATAAGGATGAACTTGCTAGACTGTTGTATGTAATGGGAGTGGAGGATTCAGCAGTTGAGAAATATATTAGCCTTTTTTTCTTTCTTATTTCTAA ATGGGAGCCAGTGGAAGTAAGTTGTCGAGTAGTTCGCCGCCGCCGCCGCCACCACCGTCGGCGGCGGCGGCGAATCTCTCATGTTCTGGGAGAATCCGGAGGGGGAGATCCAAAGGCCGTAGAGTTTTCCAGTCTGCTTGCCTCGGTACCCCCTCTGGATCGCACCACAGCGACAATGACGATAATGATTGTAAAAGTGAGAACAAAAAGAATGCTCATGATTATTCATCTGCAAATCAGACTGATCAAGCTAATGATCAGATGAAAATTGAGGGTTACAGAAGGGTCAAAGCTGAGGAATCTCTTGAAATGCCTTGCGTATCATCAAATGTTGAGTTTGATGGATGGGATCAAGCAGGTGTTGCTGTTGCAGCAGCTCCCAGAGCTGGAAGTACCTCTGCTCGTGTATCGTCCCTGCAATCGTTGAACCCTTCGAGTAGCTTCCTTTCTCGCTTTAGTTTCATTCCTGGTAATATAAGCTTCAGACTTAGTAGAGCAAGCAGTTTAGGATCGTCTAGATCTTTTCCTGTGTCTTCAACAAATCTTTCAATGTTGAACGATGAAGCCGAGCTTCATTTATCAGACAGACCTGCTGGAGGCTTGGGTGCTCAAGATGAAACTCAGCAAGGTAGTGACTTGCTTCCTGCGTCGCTGGCTAGTGCAACTCGTGCTCAATGTTATGGAGATAGTCCTGCCAATTTTAGGCTAGATACACAAAATCTGAGTCTTTCTGATAACTTACAAGACAATCAGTCAGTTGGAAACCTTTCCCATGCTCAAACTCTACCTGAAAATGAAAGCAGTGAGATTAGACAATCTGACAGGCGGACTGGATCTAGGGAACCGGTTGAACGCAATTTTCGTTTCAGTCGGACCCTTAGTGTTGGAAGACTGCGTGATAGAGTTCTTCGTAGATCATCATTGTCTGATTTCACATTTTGTCCTCCACAACAAGATGGTGAAGAGAGAGATGCAAGTCACAGTGGTGATGGTGGACATGTCTGGACTGCTGAGACGAGGGCGTTGGCATCTGTAGATAATGCTATGACCTCGCCAACAACATCGGGTTATCCAGCTTCTAGTCTATCCAGTTCGTTGTTCAGCACCCAAGGTTTTGAAATGGAAACTACACGACCTAGAGAAGCTAGATATCATGATCTGCTGGAACACAGATCAAATTTCCTCGAACGGAGAAGACGAATACGGTCCCAGGTTCGTGCCTTACAGCGGTTGGGAAGTCGCTTTGAGAACCTATCTGGTCATGAGAGATCGTGCATATTATCCGGTCAACATAGAACCAGTCATTGTACTTGTCGTATCAACAATCGTGACACAAATGTAAGCGATAACACGAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCCTCCCGCCCTGCGTCTTCTTTTGGCTCTCTGCCTGCTCCGAACGCTGTTGTAGATTCTTTGCCTGTTAAATTTCATTCCAAGTTGCAAAAGCATCAAAACGAGGAAGCTGCCCAATGCTACATATGCCTGGTCGAGTACGAGGAAGGGGATAGCATGAGAGTGTTGCCTTGCCATCATGAATTTCACGCAGCATGTGTCGACAAGTGGCTGAAGGAGATCCATAGGGTGTGCCCGCTCTGTCGAGGGGACATATGCAGCAGATCTGATGTGTTATCAGACGATGTTAAGTGA MGASGSKLSSSSPPPPPPPSAAAANLSCSGRIRRGRSKGRRVFQSACLGTPSGSHHSDNDDNDCKSENKKNAHDYSSANQTDQANDQMKIEGYRRVKAEESLEMPCVSSNVEFDGWDQAGVAVAAAPRAGSTSARVSSLQSLNPSSSFLSRFSFIPGNISFRLSRASSLGSSRSFPVSSTNLSMLNDEAELHLSDRPAGGLGAQDETQQGSDLLPASLASATRAQCYGDSPANFRLDTQNLSLSDNLQDNQSVGNLSHAQTLPENESSEIRQSDRRTGSREPVERNFRFSRTLSVGRLRDRVLRRSSLSDFTFCPPQQDGEERDASHSGDGGHVWTAETRALASVDNAMTSPTTSGYPASSLSSSLFSTQGFEMETTRPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTSHCTCRINNRDTNVSDNTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPASSFGSLPAPNAVVDSLPVKFHSKLQKHQNEEAAQCYICLVEYEEGDSMRVLPCHHEFHAACVDKWLKEIHRVCPLCRGDICSRSDVLSDDVK Homology
BLAST of CmaCh16G005110 vs. ExPASy Swiss-Prot
Match: Q08CG8 (RING finger protein 44 OS=Danio rerio OX=7955 GN=rnf44 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.2e-12 Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of CmaCh16G005110 vs. ExPASy Swiss-Prot
Match: Q9H0F5 (E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4) HSP 1 Score: 73.2 bits (178), Expect = 1.1e-11 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of CmaCh16G005110 vs. ExPASy Swiss-Prot
Match: Q8BI21 (E3 ubiquitin-protein ligase RNF38 OS=Mus musculus OX=10090 GN=Rnf38 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.1e-11 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of CmaCh16G005110 vs. ExPASy Swiss-Prot
Match: Q0WPW5 (Receptor homology region, transmembrane domain- and RING domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=RMR4 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.5e-11 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of CmaCh16G005110 vs. ExPASy Swiss-Prot
Match: Q10R93 (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0167500 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 4.2e-11 Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of CmaCh16G005110 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein ) HSP 1 Score: 348.2 bits (892), Expect = 1.3e-95 Identity = 272/592 (45.95%), Postives = 341/592 (57.60%), Query Frame = 0
BLAST of CmaCh16G005110 vs. TAIR 10
Match: AT5G45290.2 (RING/U-box superfamily protein ) HSP 1 Score: 343.6 bits (880), Expect = 3.1e-94 Identity = 272/593 (45.87%), Postives = 341/593 (57.50%), Query Frame = 0
BLAST of CmaCh16G005110 vs. TAIR 10
Match: AT4G09560.1 (Protease-associated (PA) RING/U-box zinc finger family protein ) HSP 1 Score: 72.0 bits (175), Expect = 1.8e-12 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of CmaCh16G005110 vs. TAIR 10
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein ) HSP 1 Score: 70.9 bits (172), Expect = 3.9e-12 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of CmaCh16G005110 vs. TAIR 10
Match: AT1G21960.1 (RING/U-box superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 5.1e-12 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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