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CmaCh15G014040 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCGAGAAGAGCTTTCAGATTTCGCGCCGTTTTTGCGAGTTTCTGTGTCGTCTTCCTCATCAGTCATCAGAGCTTCGTGTTTTCTTTTTTCACCTCAAAGCAGCGGAATCAAGAATCGGAAGGCGTAGGAAGATGCAGATTAAGGTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTGCAAGGCATAGTTGAAGCTCAACCCTCCTTCGAAGATCGCTTTCAAACCCTCGAAATCGGCGTTCTATGTCGGCCTTCCGCTCAGGTATTGAAATTTTCCTTTCTCATAGATCGATCTTTTAGCATTTCTCTCAATTTCTTCTTGTTTTCCTCATTCTCAGCTCCCATTGTAGCCCTAGAATTGAATTCCCTGACAAGATTACGAAATTTTTAGACTAGTTAGGTTCGGAGGAGGATTTAGTTACTGGATCGATTGAATTGATATAGGTGTTGTAAGTTGTCTTAGCTCATTTACTTTGGTTATGAATTCATAACCATTTTAATTCATATTCGTATTAACTCTCATTTGTTTATAACCCTTTTGTTCATATTCTCATTTATGATTTAGGTATGAGAATTAGTATTGCTATGCCTACACAAATAGCTTGTCTAGTATTATTTTGAGACGTGGAGTCATTGCTATTTTGTATTTGCTTAGAGGCAATTAAGAGGAATTTAGAGGAACTTTTGTCGAGAGACTTTGTAGTGTGAGAGATACATTTGTAAATATTTTAGTTATTGTGATTGACTACCACCCGTAGATGTAGGAGAATTTCTTCTCTCCAAATCACCTAAATCTGTGTCTTTTTGTTTAATTTCTATTTCTGGGGTGTGAGTGTGATCAATCTTGCTTCTACTTCCGCTACCATCATTGGGAATCAAAGCATTTTTGGTTGTGGTATTCTGCTGCAACAATTGAGTATTAGAACAGTTTAGTTGTGGCATTTGGGTACAACAATTGGTATCAGAGTATTTTGAAGGTTGTGGCATTACGGCACAATAATCGGTTTCTCCTTCACCTTGCTAAATCAGTTTCCAAGAGTGATTTCCATTTCCTAAAGTATTTTTGTTTTTCATTGCTGAGGTAATTTGTTGCATTTCATTAGTTGCTTCTAACTATTTCAATTGATTGATTGGTTTGTAGGAAGTGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTGCCACTGAAGAAGCCATTGTTGGTGTTGAAGAAAAAGAAGTGCGTGGATGAGGATCAGAGTGGCGATACCAAATCAGCTACTGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGTTTCTGTTTAAGACCAGACCAAAGGCCCTCATATCCAGTAAGTTTCTAAAATTTGGCCAGAATTTGAAATTTTTACTTTGAAAACAAGCTTATACAATAGCGAATTTATGGGTAAAGAAAATCCAGTTTCAGAAAAAAACAATGTAAAACCAAATGGTAGTTTCACTGTGTTTTGTTTCTAGCTGAGAACATAGATAACAGGGAACAATCTGGACGTCAATAGATATTGATTTAGACTCGTGTTCTGGGCCCTGGAACCCAGAATAGAAAGACAATAAGGATTTTTATGCACTAAAACCTTGACTGTTATGCGTGGATTTTGATAATGCTTCAGTAACTTCATAGTTCATCTCTTTCACAAATGTTCTTGTTGATCTTGATGATTTACATGTAGCTAAAGTAACCTGGTAATCATCTCGGGATCCGGCCTTGAATGTATGAAGTCTTCCAAGCATTAATGATGTTGAGGTTTGTTGGGAGAGGAGTCTCACATCAGCTAATTCAGCTAATTAAGGGGTTGATCTTGGTTTATAAGTAAGGAATACATCTTCATTAGTATAAGGTATTTTGGGTAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACTATTATGAAGGGTCATGATTCTTAACAAATGAGGTATAAGAAGAACCCGATGAGATGAAAGTGGGTGCTGAAATTGTACTAATGTTACAAAAAATAAGCTATGCTGAGCTTTAGTTTTCCGAGAGGGCTATCTCTTCCAAGGCTGACAATGGACCAATTCTCTACTAGTACACTAAGTACGTCTCAGTTAATAACAAAACGAGAGCTTGCCATCGATGACTTAATATACGGCCTTACTTGAACCATGTCTTCGAATAACTTAAAACTTAATATTCCAAGCATGTTTTAATTTTTGTAATAGAGATGTTTTCATTCTCTTTTCTCTTCTTTGGTGCAATGTATAATCCCTATTATGGTTTTTTTCCTATCAGAACCACAACCATCGGTGAAGGAAAGATCCCGCGCTTCAGGATCTGCAGTGACAGGCCAAACAACATGAACTCTTTCTGTGAAGGTGAAATCCATCCATATCTTTTCTGGGTAAGGTTCAATCAGAAAGGTGGAATGAAATTATTCATTCATTCATCTTTATATATGTTTAAATCCTGTTTTAGTCTCAAAATATGTATGGTTGCTTACTTTTTCAATATTTCATTTGAATCTCTATACTTTGAGTAGGGAACCATAGTTGCTATCAATTTTAGTAAGATATTTTATTAAAATATGACATAGGTATGTCTTTTGTTTATTTACCTTATCAACGTACATTTTTAAGGTCAAGTGTTAGGTTCTAATTTGACATTAGTTTTTGCTAAATGATTTGTGAGATTGAAAAGATAAGAATCAAAACACTATTGTTGAGACGAGGACGTCTCTTTCAGGTGGAAGCATGTTGTCTCTTGCCTTCTTGTAGGCAAAGTCGACCTCTAGTGATTACATATCTTCGTATTAGCAAGGTCCTCTCTTCAAAAGTTAACGTTACTTACAAGAGGACAATGTCACCTCTTGGAGAGAAGGCATGTCCTTATGTAAGCAAGGTTGTTGAGTCGACTACTCATTTTAATTCGCTTATTCAGTTAACGATATGTCTTTTTTTTAAAAAAAAAAGTCCAAACATGAGTTGGTTTTCGAGCACCTTAGTGCTCGAACTATTGTATATGCTCTTTACACTCATGTTTATAAGCATATGACATTGAGGGATCAACCTAAAAAACATTATATGGTGGTAAAACAGGTGATGAAGATATCATGGATCAGAGGTCGATATCAAAATTATGAAGATTATGAAGATGGAAAGACCAGTTGCGTAAAATTATTGTTCTTTGATGCCCATATAATCTCAGGTACAATTATTGTTCATGCTGTCTACATCCATGTTTGTAATCAAATGAAATTAAGGGGTCGACCTAAAAAACATTACATGTTGATAGAACAGGCATGAATAAAAGGTTAATATCATGAGCATTAAGATGGAACGACTTATTAGGGCTCAATTATTGTCCTCCTATTCCTCAATATGCTCAGAGTGGAATAAATTAGTATCCACCCTCTCCATGTCCATGTTTGTAAGTATATGACATCAAAAGATCAATCTAAAAACCAATCTATGGTG AGCGAGAAGAGCTTTCAGATTTCGCGCCGTTTTTGCGAGTTTCTGTGTCGTCTTCCTCATCAGTCATCAGAGCTTCGTGTTTTCTTTTTTCACCTCAAAGCAGCGGAATCAAGAATCGGAAGGCGTAGGAAGATGCAGATTAAGGTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTGCAAGGCATAGTTGAAGCTCAACCCTCCTTCGAAGATCGCTTTCAAACCCTCGAAATCGGCGTTCTATGTCGGCCTTCCGCTCAGGAAGTGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTGCCACTGAAGAAGCCATTGTTGGTGTTGAAGAAAAAGAAGTGCGTGGATGAGGATCAGAGTGGCGATACCAAATCAGCTACTGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGTTTCTGTTTAAGACCAGACCAAAGGCCCTCATATCCAAACCACAACCATCGGTGAAGGAAAGATCCCGCGCTTCAGGATCTGCAGTGACAGGCCAAACAACATGAACTCTTTCTGTGAAGGTGAAATCCATCCATATCTTTTCTGGGTGATGAAGATATCATGGATCAGAGGTCGATATCAAAATTATGAAGATTATGAAGATGGAAAGACCAGTTGCGTAAAATTATTGTTCTTTGATGCCCATATAATCTCAGGTACAATTATTGTTCATGCTGTCTACATCCATGTTTGTAATCAAATGAAATTAAGGGGTCGACCTAAAAAACATTACATGTTGATAGAACAGGCATGAATAAAAGGTTAATATCATGAGCATTAAGATGGAACGACTTATTAGGGCTCAATTATTGTCCTCCTATTCCTCAATATGCTCAGAGTGGAATAAATTAGTATCCACCCTCTCCATGTCCATGTTTGTAAGTATATGACATCAAAAGATCAATCTAAAAACCAATCTATGGTG ATGCAGATTAAGGTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTGCAAGGCATAGTTGAAGCTCAACCCTCCTTCGAAGATCGCTTTCAAACCCTCGAAATCGGCGTTCTATGTCGGCCTTCCGCTCAGGAAGTGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTGCCACTGAAGAAGCCATTGTTGGTGTTGAAGAAAAAGAAGTGCGTGGATGAGGATCAGAGTGGCGATACCAAATCAGCTACTGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGTTTCTGTTTAAGACCAGACCAAAGGCCCTCATATCCAAACCACAACCATCGGTGAAGGAAAGATCCCGCGCTTCAGGATCTGCAGTGACAGGCCAAACAACATGA MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRFQTLEIGVLCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRFLFKTRPKALISKPQPSVKERSRASGSAVTGQTT Homology
BLAST of CmaCh15G014040 vs. ExPASy Swiss-Prot
Match: Q54JL4 (Putative uncharacterized protein DDB_G0287975 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287975 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.6e-09 Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = 0
BLAST of CmaCh15G014040 vs. ExPASy TrEMBL
Match: A0A6J1I4S6 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111469152 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.3e-72 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CmaCh15G014040 vs. ExPASy TrEMBL
Match: A0A6J1EMV0 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111435796 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.1e-68 Identity = 136/142 (95.77%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmaCh15G014040 vs. ExPASy TrEMBL
Match: A0A0A0KPT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.2e-61 Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 0
BLAST of CmaCh15G014040 vs. ExPASy TrEMBL
Match: A0A5D3BQB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00430 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.8e-59 Identity = 118/140 (84.29%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of CmaCh15G014040 vs. ExPASy TrEMBL
Match: A0A1S3CT18 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.8e-59 Identity = 118/140 (84.29%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of CmaCh15G014040 vs. NCBI nr
Match: XP_022970179.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita maxima]) HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CmaCh15G014040 vs. NCBI nr
Match: XP_023551664.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo] >KAG7017126.1 hypothetical protein SDJN02_22238 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69 Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 0
BLAST of CmaCh15G014040 vs. NCBI nr
Match: KAG6579684.1 (hypothetical protein SDJN03_24132, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 268.5 bits (685), Expect = 3.3e-68 Identity = 137/142 (96.48%), Postives = 137/142 (96.48%), Query Frame = 0
BLAST of CmaCh15G014040 vs. NCBI nr
Match: XP_022929119.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita moschata]) HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67 Identity = 136/142 (95.77%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of CmaCh15G014040 vs. NCBI nr
Match: XP_038906846.1 (putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906847.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906848.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906849.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906850.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida]) HSP 1 Score: 248.4 bits (633), Expect = 3.5e-62 Identity = 123/140 (87.86%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of CmaCh15G014040 vs. TAIR 10
Match: AT5G52220.1 (CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 143.7 bits (361), Expect = 1.1e-34 Identity = 74/119 (62.18%), Postives = 84/119 (70.59%), Query Frame = 0
BLAST of CmaCh15G014040 vs. TAIR 10
Match: AT5G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607). ) HSP 1 Score: 143.7 bits (361), Expect = 1.1e-34 Identity = 74/119 (62.18%), Postives = 84/119 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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