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CmaCh15G013980 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAACCGGTGCATTCCGCTGAAAAAGCTTCTACACAAGACAATGGCGGAAGGGAACAGGGGCTCTGCAAATTTGAGCCGCGAAGTGAATTAGAGGCGAGGAAGAGAAGAGCATTTCCACTATACATTCAACCAGAGAATTCCTGCGGGACATGGAAAGCAACAGAAGAGAGGTCGTTTTCATGGAAGAAAGAGCTTAGTTTGCCGATTTGGAGGAAGAAAAAATCTGAGGAAATCCGTAGCCCATCAATTCTATTGGTTGCTCTGTATTTCGTGGCCTTCATTTTTAGGTTTTGACTTTTAACTCTTTTCTCTCTTCACTCTTTTTTTTTTTTTTTTTTTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTAATAATAAAAAGTCAATCCATTAATTTTTTTTTTTTTTTTTACTAAATTAATAAAAATATTCTTAATTTTGTATAAATATTCAGTAAAGTTTCATTAATATTCTTTAATTTTAAAAAATATTTTTACCTAAAATTTAAAATAAAATTTTAAACCTCTTTTATATTTATTTAAAAATAAATAAATTTTTTTTATTTTCAATCGTCAATAAAATCAACCAAATCTGAATGAGTTTGACTAAAATAAAATAAAGTCTAAGTAGAAGTTAATTTATAATTTTTGTATATTATAAAAATTTATTATTATATATTATTATATATAAATAATAAATAATTTTATTTTGAAATTTTGTAAATATATATTTTTTTTAATGTATTTTTTAAATAGAGTATTAGACCATCTTGCCCTCATCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCTTCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCATCGGTACTTTCTTGAGAGAGTTCAAGGAAGAAGGCTACTTGTAATGTTTTCCTTCCCTATTTTTCGTTTTTGATCCATGGTTTCTGTCCAGTCCTTGGGGAATTTGGTGGTGTCGTCGAATTCGAATTCGAATTCGCGCCTTTTAGTTATTTTTTGCTTAATTTGTGTGATGTATTGGTGTTTCTCTTATTGTTCTGAGGATCGCTGTTTCAATGTCTAATCACTACGGGTGTTTCTTTCCCAATTTGAATGTTCGATGACTATGGATATTGTCTCTGTTTCTCCAGCAATGTTGGAATTTGGATTGTGTTAACTGTTCTTTCCTTATTGAATCTTGCAGGAAATGCTTACCCGATGGAAACTTATTGTAAGTTCAATTTTCCTTGCATCTTCTTTATGGAATCTCCCAATTGATTTTTCCAGGTGAGCCATATTTTTTAGGTTATTAATTGGAGCACCAGCCTTTCCAACCATTTTTCTATTTAGTAGGTGACTTCATTCTCTAAGATCAGTTCCTTCTTCAGAAAAATCTAGAATGAATTTGGCACTAAATTTTAAGACCATAGTAGGGGAGATCTAAGAATAGAGAAAAAATTATTTTAGTGCATTTGAAAGAACTGCTTGGAAGACATCAATCTTCATTTAGGACAGAAGAGGAGCTTTTCCACTCACTGAATTATGTTGGATTTCAACTATTTTAAAGGTCAAGTTGATGCCTTACATCTCCATTTTCTCTGTCAATAGTATCAGTTGAATAGAAATTTCTATACTAGCTGTTTGACATTTAACTGAATTACCTGAGAAGATAGAGGCACATTAAAAGATCGTGATGATATCCACGAATTAGCCAATTTAACTTTGTCGCAAACATGCTGTATATGAGTATTATACGTGACGTTGAGGTAGTAAACTTGAAAATTGTTCCTACTCTTCCTCTCTTTTGTTCAGGTTTTGTCGTCCATTGTTCGATAGGGAAACGGTAGAGGTGTTATGACTCTCCTTTCTTTATCGGGAGATCCCGAGCTTAGACAAGGGAGAAGGGAATTTCGTACTTGGTGTCCTAGCCTTTCTATAGGCTTCTCTTGTAGATCTTTCTTTCATTACTTAGTGGACCCATCTCCTTCTAAGGAATCTATTTTCTCCATTCTTTGGAGTGTGAAATTTCTAAATAAAGGTGAAGTTCTTTGTTTGGGTGGTTACTCACAGAAGAATCACTAACTTGGATAGCCTCTCAAGGAAGTTTCCTCCTTTGGTAGGGTTATTCTGTTACATCATTTGTCGGAGGGCGGAGGAAGATCTGAACCATTTAGTTCGGAGTTATGACTATGCTCATTCGGTTTGTTATTACTTCTTTGGAGTGTTGGTTTGATATCCCACGTTTGTTGGGGAGGAGAACGAAACACCGTTTATAAGGGTGTGGAATCCTTTCTCTAGCAGATGCATTTTAAAGCTCTAAAAGGGAAAGCCCAAAGAAGACAATATCTACTAGCTGTGGGCTTGGTCCGTTATAGTTTGACCTTTAGATAGCCCGATACAGAGCTTTTTGTGATATGATCGAGGAATTCCTCCTCCATCCTTCGTCTAGGGGAAAAGAGAGTTATAGGGATAGTTGGGATGCATGAAACTTAGTCTTTTATAGAGAAATATATATTATGTAGCTGTTATTTTGCTTTCCAATTGACGTCAACAATTTTTTTTATCTCATTCATACACTGAATAATTTCCTTTCCTTGCAAACTATTCAATGTGGTTTATGGGAGCTATCTTTATCATCTCTAATTTTGTTTTATTCAGGCAAACCAAAATTCACAACATCGGTGCGACACTTGTAGGTGTCGATAAGTTTGGAAATAAATATTACCAGAGGCTCGATGAACAAACTCAATATGGTATTTTTCTTTCTATTTGCTATCGGTGAAGGCCAAGATGTCTAAACCATTGCTTAAGACACTTGCCATGTTATGTTAACTCAAACCGATTGATTATGTTTCTTGCTACAGAGTGATGCAGTAGTTGTACGTCGCCTTGTATTACCTATTCTTCTAGTTGTTCTGTTGAAAACTGTTCATCTTCCTGCTAATGATATTCCTCTAATTTCGATATGAAACTTGACAAAATTTTGCAAGAACAAAAAAAATTTACCCTCGAAAGTAAAAGCAAGAAAAGGAATTTTTACATATAGGACGACCCATTTTATATCTTGAACATCGAATTCGCGCTTATGCTTGTTCCATGTTAACGAAAGAGTTTATGAACATTTTTTGAACTCGATGTGTTGTCTAACCGTCTCTTTTTATGTTTTGTGAAAACCTGAGCTAGTGAATTTGATATCTCTGTAGGAAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGTTATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACTACATAACCGATCACACAGGAGACGAGGTAACTCCCCTTCTCTAGCATTTCTGTGAGTTTCAAAACACATCGAAGTTCGAGGACTAAATGTGTAATATTAAAAGTTTAAGGACCAAATAGACATAAACTTCAAAGCTCAGATTTATCGTTTCACAGCTTCTGATGCTGAAACCGAGTAGGTATGGGATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTTATCTACCATTCCAAGGGACATGCTCTTAATTCTGGGCAGAGAGATTGGACTCGCTATCAGTCATGGCAACCAACCAAGTCCTAAGTAATTTGTGTATCAATTCCTTTGTTTAATTTGGAAATCCATGGGATATCTGGCTGTGTGCTTTCCTGTTCTTCTGAATAAGCGACTTGTTGTTGTCTCTGCAAGCTGTGAATTATTTTTCATCATGTTTACTGCACAACACATGAGGGATTTTCTGCATGTTTCTGTTCTTTTGTGCCATGTCTTAGCGATCACTGTGATAGAACGTTATATCATGGCAGTGTATCAGATGTTATCAGCTTTGGGCATTTCCTAAAACGAAAGTTCGAGCAAAATTTGGTGTCTCTAAATGTTTGAAGTTCGTACTCAAATTTTGATGTTAGAACGACTTCATCTCAAGATATCTTATTGCGTGTTGAATACATCAAAGTTAAATCGATGATTGATAAC ATGGAGAAACCGGTGCATTCCGCTGAAAAAGCTTCTACACAAGACAATGGCGGAAGGGAACAGGGGCTCTGCAAATTTGAGCCGCGAAGTGAATTAGAGGCGAGGAAGAGAAGAGCATTTCCACTATACATTCAACCAGAGAATTCCTGCGGGACATGGAAAGCAACAGAAGAGAGGTCGTTTTCATGGAAGAAAGAGCTTAGTTTGCCGATTTGGAGGAAGAAAAAATCTGAGGAAATCCGTAGCCCATCAATTCTATTGGTTGCTCTGTATTTCGTGGCCTTCATTTTTAGAGTATTAGACCATCTTGCCCTCATCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCTTCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCATCGGTACTTTCTTGAGAGAGTTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAACTTATTGCAAACCAAAATTCACAACATCGGTGCGACACTTGTAGGTGTCGATAAGTTTGGAAATAAATATTACCAGAGGCTCGATGAACAAACTCAATATGGAAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGTTATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACTACATAACCGATCACACAGGAGACGAGCTTCTGATGCTGAAACCGAGTAGGTATGGGATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTTATCTACCATTCCAAGGGACATGCTCTTAATTCTGGGCAGAGAGATTGGACTCGCTATCAGTCATGGCAACCAACCAAGTCCTAAGTAATTTGTGTATCAATTCCTTTGTTTAATTTGGAAATCCATGGGATATCTGGCTGTGTGCTTTCCTGTTCTTCTGAATAAGCGACTTGTTGTTGTCTCTGCAAGCTGTGAATTATTTTTCATCATGTTTACTGCACAACACATGAGGGATTTTCTGCATGTTTCTGTTCTTTTGTGCCATGTCTTAGCGATCACTGTGATAGAACGTTATATCATGGCAGTGTATCAGATGTTATCAGCTTTGGGCATTTCCTAAAACGAAAGTTCGAGCAAAATTTGGTGTCTCTAAATGTTTGAAGTTCGTACTCAAATTTTGATGTTAGAACGACTTCATCTCAAGATATCTTATTGCGTGTTGAATACATCAAAGTTAAATCGATGATTGATAAC ATGGAGAAACCGGTGCATTCCGCTGAAAAAGCTTCTACACAAGACAATGGCGGAAGGGAACAGGGGCTCTGCAAATTTGAGCCGCGAAGTGAATTAGAGGCGAGGAAGAGAAGAGCATTTCCACTATACATTCAACCAGAGAATTCCTGCGGGACATGGAAAGCAACAGAAGAGAGGTCGTTTTCATGGAAGAAAGAGCTTAGTTTGCCGATTTGGAGGAAGAAAAAATCTGAGGAAATCCGTAGCCCATCAATTCTATTGGTTGCTCTGTATTTCGTGGCCTTCATTTTTAGAGTATTAGACCATCTTGCCCTCATCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCTTCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCATCGGTACTTTCTTGAGAGAGTTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAACTTATTGCAAACCAAAATTCACAACATCGGTGCGACACTTGTAGGTGTCGATAAGTTTGGAAATAAATATTACCAGAGGCTCGATGAACAAACTCAATATGGAAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGTTATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACTACATAACCGATCACACAGGAGACGAGCTTCTGATGCTGAAACCGAGTAGGTATGGGATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTTATCTACCATTCCAAGGGACATGCTCTTAATTCTGGGCAGAGAGATTGGACTCGCTATCAGTCATGGCAACCAACCAAGTCCTAA MEKPVHSAEKASTQDNGGREQGLCKFEPRSELEARKRRAFPLYIQPENSCGTWKATEERSFSWKKELSLPIWRKKKSEEIRSPSILLVALYFVAFIFRVLDHLALIVLEAAAWTEEDQQSRVGSARTPRREMASVVRGILKSIKDKGIGTFLREFKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNSGQRDWTRYQSWQPTKS Homology
BLAST of CmaCh15G013980 vs. ExPASy Swiss-Prot
Match: Q9M9M9 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana OX=3702 GN=At3g03100 PE=1 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 4.0e-71 Identity = 118/156 (75.64%), Postives = 138/156 (88.46%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy Swiss-Prot
Match: Q9N2W7 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenorhabditis elegans OX=6239 GN=Y94H6A.8 PE=3 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-13 Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy Swiss-Prot
Match: Q54MV7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum OX=44689 GN=ndufa12 PE=2 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 6.5e-13 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy Swiss-Prot
Match: Q0MQ85 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus OX=9600 GN=NDUFA12 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-11 Identity = 39/94 (41.49%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy Swiss-Prot
Match: O97725 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Bos taurus OX=9913 GN=NDUFA12 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.7e-11 Identity = 43/115 (37.39%), Postives = 58/115 (50.43%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy TrEMBL
Match: A0A6J1HZ90 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111469006 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 3.1e-90 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy TrEMBL
Match: A0A6J1ELZ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111435820 PE=3 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 4.9e-88 Identity = 153/158 (96.84%), Postives = 156/158 (98.73%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy TrEMBL
Match: A0A6J1H155 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111459435 PE=3 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 3.2e-87 Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy TrEMBL
Match: A0A0A0KNC9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_5G172840 PE=3 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 1.2e-86 Identity = 151/158 (95.57%), Postives = 155/158 (98.10%), Query Frame = 0
BLAST of CmaCh15G013980 vs. ExPASy TrEMBL
Match: A0A6J1K5W7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111491451 PE=3 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.6e-86 Identity = 151/158 (95.57%), Postives = 154/158 (97.47%), Query Frame = 0
BLAST of CmaCh15G013980 vs. NCBI nr
Match: XP_022969961.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 isoform X1 [Cucurbita maxima]) HSP 1 Score: 341.7 bits (875), Expect = 6.4e-90 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
BLAST of CmaCh15G013980 vs. NCBI nr
Match: XP_023550885.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335.1 bits (858), Expect = 6.0e-88 Identity = 154/158 (97.47%), Postives = 156/158 (98.73%), Query Frame = 0
BLAST of CmaCh15G013980 vs. NCBI nr
Match: XP_022929152.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata]) HSP 1 Score: 334.3 bits (856), Expect = 1.0e-87 Identity = 153/158 (96.84%), Postives = 156/158 (98.73%), Query Frame = 0
BLAST of CmaCh15G013980 vs. NCBI nr
Match: XP_022958111.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata] >KAG6605691.1 putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035599.1 putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 331.6 bits (849), Expect = 6.6e-87 Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 0
BLAST of CmaCh15G013980 vs. NCBI nr
Match: XP_004143640.2 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus] >KGN50404.1 hypothetical protein Csa_000501 [Cucumis sativus]) HSP 1 Score: 329.7 bits (844), Expect = 2.5e-86 Identity = 151/158 (95.57%), Postives = 155/158 (98.10%), Query Frame = 0
BLAST of CmaCh15G013980 vs. TAIR 10
Match: AT3G03100.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit ) HSP 1 Score: 269.6 bits (688), Expect = 2.9e-72 Identity = 118/156 (75.64%), Postives = 138/156 (88.46%), Query Frame = 0
BLAST of CmaCh15G013980 vs. TAIR 10
Match: AT3G03100.2 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit ) HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71 Identity = 117/156 (75.00%), Postives = 137/156 (87.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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