CmaCh15G011030 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCCCCTCATCCATTTCTCCTCCCGCCCTCTCGAATCGACCAAGGCCATACCGAGTTCGAGAATTTCCATACCATCCACTCGCTCGTCCGCACCCGACCTTCTATAGCTGATTTAGAAGACGAAACTCCACCATCAAACCAAAGTTCTAGCTCAAACGCCCACAACAATACAAAGAACAACAACCAACAAGAACAAGACGAAGAAGGGGTTTTGTGTTGCGCATGTCACAAGCCATTGACACCAATAGGTGTCGAAAGCACAACTCTTTGTTACATATGCAACAAATTGCATTCTACGTACTTTTGTGGACCGTGTTCAAATGGATGGATCAATTTCTTTGATCGAAGATGCTCCGAGTTGCCAAAGGAGATTCATTATCCCTATCATCGTCATCGTCTCACCATGAGCATTAGAAAGAACTCTAATTGCTGTGTTTGTGGGAAGAGCTGTGGAGCTTTCAATTATGGCTGCGATGGCTGCAGCTTCGTTGTTGATATCAAATGTGTTTTGAAAGAGAAAAAGAAATATGATGGCCCTATAACAAATGTGAGAAAGTTTATGGGTTTGGTCTATGATTTGTAA ATGGATCCCCCTCATCCATTTCTCCTCCCGCCCTCTCGAATCGACCAAGGCCATACCGAGTTCGAGAATTTCCATACCATCCACTCGCTCGTCCGCACCCGACCTTCTATAGCTGATTTAGAAGACGAAACTCCACCATCAAACCAAAGTTCTAGCTCAAACGCCCACAACAATACAAAGAACAACAACCAACAAGAACAAGACGAAGAAGGGGTTTTGTGTTGCGCATGTCACAAGCCATTGACACCAATAGGTGTCGAAAGCACAACTCTTTGTTACATATGCAACAAATTGCATTCTACGTACTTTTGTGGACCGTGTTCAAATGGATGGATCAATTTCTTTGATCGAAGATGCTCCGAGTTGCCAAAGGAGATTCATTATCCCTATCATCGTCATCGTCTCACCATGAGCATTAGAAAGAACTCTAATTGCTGTGTTTGTGGGAAGAGCTGTGGAGCTTTCAATTATGGCTGCGATGGCTGCAGCTTCGTTGTTGATATCAAATGTGTTTTGAAAGAGAAAAAGAAATATGATGGCCCTATAACAAATGTGAGAAAGTTTATGGGTTTGGTCTATGATTTGTAA ATGGATCCCCCTCATCCATTTCTCCTCCCGCCCTCTCGAATCGACCAAGGCCATACCGAGTTCGAGAATTTCCATACCATCCACTCGCTCGTCCGCACCCGACCTTCTATAGCTGATTTAGAAGACGAAACTCCACCATCAAACCAAAGTTCTAGCTCAAACGCCCACAACAATACAAAGAACAACAACCAACAAGAACAAGACGAAGAAGGGGTTTTGTGTTGCGCATGTCACAAGCCATTGACACCAATAGGTGTCGAAAGCACAACTCTTTGTTACATATGCAACAAATTGCATTCTACGTACTTTTGTGGACCGTGTTCAAATGGATGGATCAATTTCTTTGATCGAAGATGCTCCGAGTTGCCAAAGGAGATTCATTATCCCTATCATCGTCATCGTCTCACCATGAGCATTAGAAAGAACTCTAATTGCTGTGTTTGTGGGAAGAGCTGTGGAGCTTTCAATTATGGCTGCGATGGCTGCAGCTTCGTTGTTGATATCAAATGTGTTTTGAAAGAGAAAAAGAAATATGATGGCCCTATAACAAATGTGAGAAAGTTTATGGGTTTGGTCTATGATTTGTAA MDPPHPFLLPPSRIDQGHTEFENFHTIHSLVRTRPSIADLEDETPPSNQSSSSNAHNNTKNNNQQEQDEEGVLCCACHKPLTPIGVESTTLCYICNKLHSTYFCGPCSNGWINFFDRRCSELPKEIHYPYHRHRLTMSIRKNSNCCVCGKSCGAFNYGCDGCSFVVDIKCVLKEKKKYDGPITNVRKFMGLVYDL Homology
BLAST of CmaCh15G011030 vs. ExPASy TrEMBL
Match: V4SVV6 (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10027334mg PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08 Identity = 38/112 (33.93%), Postives = 58/112 (51.79%), Query Frame = 0
BLAST of CmaCh15G011030 vs. ExPASy TrEMBL
Match: A0A068UP24 (Phorbol-ester/DAG-type domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00030649001 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07 Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 0
BLAST of CmaCh15G011030 vs. ExPASy TrEMBL
Match: A0A067EXR0 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g045770mg PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.8e-07 Identity = 54/187 (28.88%), Postives = 82/187 (43.85%), Query Frame = 0
BLAST of CmaCh15G011030 vs. ExPASy TrEMBL
Match: M5W777 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016986mg PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06 Identity = 40/119 (33.61%), Postives = 57/119 (47.90%), Query Frame = 0
BLAST of CmaCh15G011030 vs. ExPASy TrEMBL
Match: A0A251N820 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G074400 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06 Identity = 40/119 (33.61%), Postives = 57/119 (47.90%), Query Frame = 0
BLAST of CmaCh15G011030 vs. NCBI nr
Match: KAG6579395.1 (hypothetical protein SDJN03_23843, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 399.4 bits (1025), Expect = 1.7e-107 Identity = 181/195 (92.82%), Postives = 189/195 (96.92%), Query Frame = 0
BLAST of CmaCh15G011030 vs. NCBI nr
Match: XP_024949478.1 (uncharacterized protein LOC112496351 [Citrus sinensis]) HSP 1 Score: 69.3 bits (168), Expect = 4.1e-08 Identity = 38/112 (33.93%), Postives = 58/112 (51.79%), Query Frame = 0
BLAST of CmaCh15G011030 vs. NCBI nr
Match: ESR41296.1 (hypothetical protein CICLE_v10027334mg, partial [Citrus clementina]) HSP 1 Score: 69.3 bits (168), Expect = 4.1e-08 Identity = 38/112 (33.93%), Postives = 58/112 (51.79%), Query Frame = 0
BLAST of CmaCh15G011030 vs. NCBI nr
Match: CDP10062.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 66.2 bits (160), Expect = 3.5e-07 Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 0
BLAST of CmaCh15G011030 vs. NCBI nr
Match: KDO59944.1 (hypothetical protein CISIN_1g045770mg [Citrus sinensis]) HSP 1 Score: 65.1 bits (157), Expect = 7.7e-07 Identity = 54/187 (28.88%), Postives = 82/187 (43.85%), Query Frame = 0
BLAST of CmaCh15G011030 vs. TAIR 10
Match: AT5G42840.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 48.1 bits (113), Expect = 9.1e-06 Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 0
BLAST of CmaCh15G011030 vs. TAIR 10
Match: AT5G42840.2 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 48.1 bits (113), Expect = 9.1e-06 Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 0
BLAST of CmaCh15G011030 vs. TAIR 10
Match: AT2G21840.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05 Identity = 30/102 (29.41%), Postives = 45/102 (44.12%), Query Frame = 0
BLAST of CmaCh15G011030 vs. TAIR 10
Match: AT3G27500.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 45.8 bits (107), Expect = 4.5e-05 Identity = 34/131 (25.95%), Postives = 53/131 (40.46%), Query Frame = 0
BLAST of CmaCh15G011030 vs. TAIR 10
Match: AT2G21810.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 41.6 bits (96), Expect = 8.5e-04 Identity = 29/104 (27.88%), Postives = 47/104 (45.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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