CmaCh15G010040 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTTGGCGGCGGTGGAGGCGGTGGCGGCGGTGGCGACAAGCATCAGCACCTCCTGCATCTGAATTTCCATTTCCATATTCATTTGCCTCACTTTCACCACCATCATCATCGGAACAAGGTGGAGACTCCCAAGGGGTGTTTGGCTATTCTCGTCGGCCAACAGCAAGAGCGGTTCGTGATTCCTGTCATTTATGTTAACCATCCCTTGTTCGCTCAGCTCTTGAAGGAGGCCGAGGACGAGTATGGCTTCGACCAGAAAGGACCTATCGCCATCCCTTGCCCTGTCGACGACTTCCGTACTCTCCAGGGCATAATTCATCACGATCATCACCCCCATCATCTTCTTCCCATCTCCTGTTTTAGGGATTCGTCTCATCCCCATTGCTGA ATGGGGTTTGGCGGCGGTGGAGGCGGTGGCGGCGGTGGCGACAAGCATCAGCACCTCCTGCATCTGAATTTCCATTTCCATATTCATTTGCCTCACTTTCACCACCATCATCATCGGAACAAGGTGGAGACTCCCAAGGGGTGTTTGGCTATTCTCGTCGGCCAACAGCAAGAGCGGTTCGTGATTCCTGTCATTTATGTTAACCATCCCTTGTTCGCTCAGCTCTTGAAGGAGGCCGAGGACGAGTATGGCTTCGACCAGAAAGGACCTATCGCCATCCCTTGCCCTGTCGACGACTTCCGTACTCTCCAGGGCATAATTCATCACGATCATCACCCCCATCATCTTCTTCCCATCTCCTGTTTTAGGGATTCGTCTCATCCCCATTGCTGA ATGGGGTTTGGCGGCGGTGGAGGCGGTGGCGGCGGTGGCGACAAGCATCAGCACCTCCTGCATCTGAATTTCCATTTCCATATTCATTTGCCTCACTTTCACCACCATCATCATCGGAACAAGGTGGAGACTCCCAAGGGGTGTTTGGCTATTCTCGTCGGCCAACAGCAAGAGCGGTTCGTGATTCCTGTCATTTATGTTAACCATCCCTTGTTCGCTCAGCTCTTGAAGGAGGCCGAGGACGAGTATGGCTTCGACCAGAAAGGACCTATCGCCATCCCTTGCCCTGTCGACGACTTCCGTACTCTCCAGGGCATAATTCATCACGATCATCACCCCCATCATCTTCTTCCCATCTCCTGTTTTAGGGATTCGTCTCATCCCCATTGCTGA MGFGGGGGGGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERFVIPVIYVNHPLFAQLLKEAEDEYGFDQKGPIAIPCPVDDFRTLQGIIHHDHHPHHLLPISCFRDSSHPHC Homology
BLAST of CmaCh15G010040 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22 Identity = 55/100 (55.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 7.2e-12 Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 7.2e-12 Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11 Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy TrEMBL
Match: A0A6J1IHB8 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111472971 PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 2.2e-72 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy TrEMBL
Match: A0A0A0KJC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139100 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54 Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy TrEMBL
Match: A0A2P5DFD6 (Small auxin-up RNA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_068350 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 7.0e-34 Identity = 80/143 (55.94%), Postives = 92/143 (64.34%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy TrEMBL
Match: A0A2P5E6P5 (Small auxin-up RNA OS=Trema orientale OX=63057 GN=TorRG33x02_229440 PE=3 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.6e-33 Identity = 80/144 (55.56%), Postives = 91/144 (63.19%), Query Frame = 0
BLAST of CmaCh15G010040 vs. ExPASy TrEMBL
Match: A0A6J1AA25 (auxin-responsive protein SAUR32 OS=Herrania umbratica OX=108875 GN=LOC110416336 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 5.0e-32 Identity = 77/123 (62.60%), Postives = 88/123 (71.54%), Query Frame = 0
BLAST of CmaCh15G010040 vs. NCBI nr
Match: XP_022974339.1 (auxin-responsive protein SAUR32-like [Cucurbita maxima]) HSP 1 Score: 281.2 bits (718), Expect = 4.6e-72 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CmaCh15G010040 vs. NCBI nr
Match: XP_023549648.1 (auxin-responsive protein SAUR32 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.6 bits (714), Expect = 1.3e-71 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CmaCh15G010040 vs. NCBI nr
Match: KAG7016800.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 254.2 bits (648), Expect = 6.0e-64 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of CmaCh15G010040 vs. NCBI nr
Match: KGN49830.1 (hypothetical protein Csa_000428 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 9.6e-54 Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 0
BLAST of CmaCh15G010040 vs. NCBI nr
Match: KAG6605808.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.9 bits (468), Expect = 4.5e-43 Identity = 90/113 (79.65%), Postives = 98/113 (86.73%), Query Frame = 0
BLAST of CmaCh15G010040 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28 Identity = 67/129 (51.94%), Postives = 83/129 (64.34%), Query Frame = 0
BLAST of CmaCh15G010040 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.5 bits (293), Expect = 8.2e-27 Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = 0
BLAST of CmaCh15G010040 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 107.5 bits (267), Expect = 8.5e-24 Identity = 55/100 (55.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of CmaCh15G010040 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 95.9 bits (237), Expect = 2.5e-20 Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 0
BLAST of CmaCh15G010040 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 79.0 bits (193), Expect = 3.2e-15 Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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