CmaCh15G009920 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G009920
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc finger protein WIP6-like
Location	Cma_Chr15: 5931166 .. 5931618 (-)
RNA-Seq Expression	CmaCh15G009920
Synteny	CmaCh15G009920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAATGAATGTTGCAAAAACAGATGCGCACATGTGGGGGCATGGATGAGAGTACATAAAAGGGGCAGGGTCATTAAGAGGATCAAAGGCAGCTTCATCAATGCTACGGCTTGCGTGGTATTGCTGTGCAGAAGGGTGCAAAACAACATAGAGCATCCCAAGGTCAAGGCCATTGAAAGACTTTAGAACCCTTCAGACACATTACAAGAGAGAAAGCATGGGACAAAGGCCTTTCGTTGTAACAAATGTGGGAAGGCATTTGCAGTGCGAGGGGATTGGAGGACACACGAGAAAAACTGTGGGAAGCTTTGGTTTTGCATTTGTGGGTCTAATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCCAGCCTTTGGGGATGCCCATGCACCTCATACTCTCCAACTTTCTCAGCTTCAAGATCATGATGATCACCAACGTATAAATTAA

mRNA sequence

ATGTTGAATGAATGTTGCAAAAACAGATGCGCACATGTGGGGGCATGGATGAGAGTACATAAAAGGGGCAGGGTCATTAAGAGGATCAAAGGCAGCTTCATCAATGCTACGGCTTGCGTGGTATTGCTGTGCAGAAGGGTGCAAAACAACATAGAGCATCCCAAGAACCCTTCAGACACATTACAAGAGAGAAAGCATGGGACAAAGGCCTTTCGTTGTAACAAATGTGGGAAGGCATTTGCAGTGCGAGGGGATTGGAGGACACACGAGAAAAACTGTGGGAAGCTTTGGTTTTGCATTTGTGGGTCTAATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCCAGCCTTTGGGGATGCCCATGCACCTCATACTCTCCAACTTTCTCAGCTTCAAGATCATGATGATCACCAACGTATAAATTAA

Coding sequence (CDS)

ATGTTGAATGAATGTTGCAAAAACAGATGCGCACATGTGGGGGCATGGATGAGAGTACATAAAAGGGGCAGGGTCATTAAGAGGATCAAAGGCAGCTTCATCAATGCTACGGCTTGCGTGGTATTGCTGTGCAGAAGGGTGCAAAACAACATAGAGCATCCCAAGAACCCTTCAGACACATTACAAGAGAGAAAGCATGGGACAAAGGCCTTTCGTTGTAACAAATGTGGGAAGGCATTTGCAGTGCGAGGGGATTGGAGGACACACGAGAAAAACTGTGGGAAGCTTTGGTTTTGCATTTGTGGGTCTAATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCCAGCCTTTGGGGATGCCCATGCACCTCATACTCTCCAACTTTCTCAGCTTCAAGATCATGATGATCACCAACGTATAAATTAA

Protein sequence

MLNECCKNRCAHVGAWMRVHKRGRVIKRIKGSFINATACVVLLCRRVQNNIEHPKNPSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCICGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQDHDDHQRIN

Homology

[Close]

BLAST of CmaCh15G009920 vs. ExPASy Swiss-Prot
Match: Q9FX68 (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-29
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 48  QNNIEHPKNPS-------DTLQERKHGTKAFRC-NKCGKAFAVRGDWRTHEKNCGKLWFC 107
           +NNI+HP++          T  +RKHG K FRC  KC K FAVRGDWRTHEKNCGKLWFC
Sbjct: 156 KNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFC 215

Query: 108 ICGSNFKHKRSLKDHVPAFGDAHAPHTL 128
           +CGS+FKHKRSLKDHV AFGD HA HT+
Sbjct: 216 VCGSDFKHKRSLKDHVRAFGDGHAAHTV 243

[Close]

BLAST of CmaCh15G009920 vs. ExPASy Swiss-Prot
Match: Q9SVY1 (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 55/85 (64.71%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 48  QNNIEHPK-------NPSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNI+HP+           T  +RKHG K F C KCGKAFAVRGDWRTHEKNCGKLW+CI
Sbjct: 271 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCI 330

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPH 126
           CGS+FKHKRSLKDH+ AFG+ H  +
Sbjct: 331 CGSDFKHKRSLKDHIKAFGNGHGAY 355

[Close]

BLAST of CmaCh15G009920 vs. ExPASy Swiss-Prot
Match: Q9SGD1 (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 48  QNNIEHPKNPS-------DTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNI HP++          T  +RKHG+K F C KCGKA AV+GDWRTHEKNCGKLW+C 
Sbjct: 235 KNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCT 294

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPH 126
           CGS+FKHKRSLKDH+ +FG  H+PH
Sbjct: 295 CGSDFKHKRSLKDHIRSFGSGHSPH 319

[Close]

BLAST of CmaCh15G009920 vs. ExPASy Swiss-Prot
Match: Q8W031 (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.6e-28
Identity = 58/98 (59.18%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 48  QNNIEHPK-------NPSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNI+HP+           T  +RKHG+K F C  CGKAFAV+GDWRTHEKNCGKLW+C 
Sbjct: 232 KNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCS 291

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQDHDDH 139
           CGS+FKHKRSLKDHV AFG+ H P  +  S   DH+D+
Sbjct: 292 CGSDFKHKRSLKDHVKAFGNGHVPCGID-SFGGDHEDY 328

[Close]

BLAST of CmaCh15G009920 vs. ExPASy Swiss-Prot
Match: Q8W030 (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.9e-28
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 48  QNNIEHPK-------NPSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNI+HP+           T  +RKHG + F C +CGKAFAV+GDWRTHEKNCGKLW+C 
Sbjct: 310 KNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCS 369

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAP 125
           CGS+FKHKRSLKDHV AFG+ H P
Sbjct: 370 CGSDFKHKRSLKDHVKAFGNGHVP 393

[Close]

BLAST of CmaCh15G009920 vs. ExPASy TrEMBL
Match: A0A6J1I950 (zinc finger protein WIP6-like OS=Cucurbita maxima OX=3661 GN=LOC111472204 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-33
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 177 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 236

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQ-----DHDDHQRIN 143
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++     D+DDH+ +N
Sbjct: 237 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVN 283

[Close]

BLAST of CmaCh15G009920 vs. ExPASy TrEMBL
Match: A0A6J1EW22 (zinc finger protein WIP6-like OS=Cucurbita moschata OX=3662 GN=LOC111436584 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-33
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 177 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 236

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQ-----DHDDHQRIN 143
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++     D+DDH+ +N
Sbjct: 237 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVN 283

[Close]

BLAST of CmaCh15G009920 vs. ExPASy TrEMBL
Match: A0A5A7VHR3 (Zinc finger protein WIP6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00270 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.4e-33
Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK+FAVRGDWRTHEKNCGKLWFCI
Sbjct: 168 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLWFCI 227

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQDHDD 138
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++D +D
Sbjct: 228 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDND 264

[Close]

BLAST of CmaCh15G009920 vs. ExPASy TrEMBL
Match: A0A0A0KQ06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G365160 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.4e-33
Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK+FAVRGDWRTHEKNCGKLWFCI
Sbjct: 165 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLWFCI 224

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQDHDD 138
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++D +D
Sbjct: 225 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDND 261

[Close]

BLAST of CmaCh15G009920 vs. ExPASy TrEMBL
Match: A0A1S3CR84 (zinc finger protein WIP6-like OS=Cucumis melo OX=3656 GN=LOC103503431 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.4e-33
Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK+FAVRGDWRTHEKNCGKLWFCI
Sbjct: 168 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLWFCI 227

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQDHDD 138
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++D +D
Sbjct: 228 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDND 264

[Close]

BLAST of CmaCh15G009920 vs. NCBI nr
Match: XP_023546764.1 (zinc finger protein WIP6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546773.1 zinc finger protein WIP6-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-33
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 180 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 239

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQ-----DHDDHQRIN 143
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++     D+DDH+ +N
Sbjct: 240 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVN 286

[Close]

BLAST of CmaCh15G009920 vs. NCBI nr
Match: KAG6601746.1 (Zinc finger protein WIP6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-33
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 176 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 235

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQ-----DHDDHQRIN 143
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++     D+DDH+ +N
Sbjct: 236 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVN 282

[Close]

BLAST of CmaCh15G009920 vs. NCBI nr
Match: XP_022973621.1 (zinc finger protein WIP6-like [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-33
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 177 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 236

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQ-----DHDDHQRIN 143
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++     D+DDH+ +N
Sbjct: 237 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVN 283

[Close]

BLAST of CmaCh15G009920 vs. NCBI nr
Match: XP_022930100.1 (zinc finger protein WIP6-like [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-33
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 177 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 236

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQ-----DHDDHQRIN 143
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++     D+DDH+ +N
Sbjct: 237 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVN 283

[Close]

BLAST of CmaCh15G009920 vs. NCBI nr
Match: XP_038875923.1 (zinc finger protein WIP6-like [Benincasa hispida])

HSP 1 Score: 151.4 bits (381), Expect = 6.0e-33
Identity = 70/110 (63.64%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 48  QNNIEHPKN-------PSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNIEHP++          T  +RKHG K F C KCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 160 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 219

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQDHD--------DHQRIN 143
           CGS+FKHKRSLKDHV AFGD HAPHT+QL +++D D        DHQ +N
Sbjct: 220 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDDWDDHDDTDHQHVN 269

[Close]

BLAST of CmaCh15G009920 vs. TAIR 10
Match: AT1G13290.1 (C2H2-like zinc finger protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 48  QNNIEHPKNPS-------DTLQERKHGTKAFRC-NKCGKAFAVRGDWRTHEKNCGKLWFC 107
           +NNI+HP++          T  +RKHG K FRC  KC K FAVRGDWRTHEKNCGKLWFC
Sbjct: 156 KNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFC 215

Query: 108 ICGSNFKHKRSLKDHVPAFGDAHAPHTL 128
           +CGS+FKHKRSLKDHV AFGD HA HT+
Sbjct: 216 VCGSDFKHKRSLKDHVRAFGDGHAAHTV 243

[Close]

BLAST of CmaCh15G009920 vs. TAIR 10
Match: AT3G57670.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-29
Identity = 55/85 (64.71%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 48  QNNIEHPK-------NPSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNI+HP+           T  +RKHG K F C KCGKAFAVRGDWRTHEKNCGKLW+CI
Sbjct: 271 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCI 330

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPH 126
           CGS+FKHKRSLKDH+ AFG+ H  +
Sbjct: 331 CGSDFKHKRSLKDHIKAFGNGHGAY 355

[Close]

BLAST of CmaCh15G009920 vs. TAIR 10
Match: AT1G08290.1 (WIP domain protein 3 )

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 48  QNNIEHPKNPS-------DTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNI HP++          T  +RKHG+K F C KCGKA AV+GDWRTHEKNCGKLW+C 
Sbjct: 235 KNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCT 294

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPH 126
           CGS+FKHKRSLKDH+ +FG  H+PH
Sbjct: 295 CGSDFKHKRSLKDHIRSFGSGHSPH 319

[Close]

BLAST of CmaCh15G009920 vs. TAIR 10
Match: AT1G51220.1 (WIP domain protein 5 )

HSP 1 Score: 125.6 bits (314), Expect = 3.3e-29
Identity = 58/98 (59.18%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 48  QNNIEHPK-------NPSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNI+HP+           T  +RKHG+K F C  CGKAFAV+GDWRTHEKNCGKLW+C 
Sbjct: 232 KNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCS 291

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAPHTLQLSQLQDHDDH 139
           CGS+FKHKRSLKDHV AFG+ H P  +  S   DH+D+
Sbjct: 292 CGSDFKHKRSLKDHVKAFGNGHVPCGID-SFGGDHEDY 328

[Close]

BLAST of CmaCh15G009920 vs. TAIR 10
Match: AT3G20880.1 (WIP domain protein 4 )

HSP 1 Score: 124.8 bits (312), Expect = 5.6e-29
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 48  QNNIEHPK-------NPSDTLQERKHGTKAFRCNKCGKAFAVRGDWRTHEKNCGKLWFCI 107
           +NNI+HP+           T  +RKHG + F C +CGKAFAV+GDWRTHEKNCGKLW+C 
Sbjct: 310 KNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCS 369

Query: 108 CGSNFKHKRSLKDHVPAFGDAHAP 125
           CGS+FKHKRSLKDHV AFG+ H P
Sbjct: 370 CGSDFKHKRSLKDHVKAFGNGHVP 393

The following BLAST results are available for this feature:

BLAST of CmaCh15G009920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FX68	1.4e-29	67.05	Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1	[more]
Q9SVY1	1.6e-28	64.71	Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1	[more]
Q9SGD1	2.7e-28	62.35	Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1	[more]
Q8W031	4.6e-28	59.18	Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1	[more]
Q8W030	7.9e-28	63.10	Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1	[more]

BLAST of CmaCh15G009920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I950	1.7e-33	64.49	zinc finger protein WIP6-like OS=Cucurbita maxima OX=3661 GN=LOC111472204 PE=3 S...	[more]
A0A6J1EW22	1.7e-33	64.49	zinc finger protein WIP6-like OS=Cucurbita moschata OX=3662 GN=LOC111436584 PE=3...	[more]
A0A5A7VHR3	8.4e-33	68.04	Zinc finger protein WIP6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0KQ06	8.4e-33	68.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G365160 PE=3 SV=1	[more]
A0A1S3CR84	8.4e-33	68.04	zinc finger protein WIP6-like OS=Cucumis melo OX=3656 GN=LOC103503431 PE=3 SV=1	[more]

BLAST of CmaCh15G009920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546764.1	3.5e-33	64.49	zinc finger protein WIP6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546...	[more]
KAG6601746.1	3.5e-33	64.49	Zinc finger protein WIP6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022973621.1	3.5e-33	64.49	zinc finger protein WIP6-like [Cucurbita maxima]	[more]
XP_022930100.1	3.5e-33	64.49	zinc finger protein WIP6-like [Cucurbita moschata]	[more]
XP_038875923.1	6.0e-33	63.64	zinc finger protein WIP6-like [Benincasa hispida]	[more]

BLAST of CmaCh15G009920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13290.1	1.0e-30	67.05	C2H2-like zinc finger protein	[more]
AT3G57670.1	1.1e-29	64.71	C2H2-type zinc finger family protein	[more]
AT1G08290.1	1.9e-29	62.35	WIP domain protein 3	[more]
AT1G51220.1	3.3e-29	59.18	WIP domain protein 5	[more]
AT3G20880.1	5.6e-29	63.10	WIP domain protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 43..122 e-value: 1.5E-6 score: 29.9
None	No IPR available	PANTHER	PTHR45878:SF15	OS09G0307400 PROTEIN	coord: 47..138
IPR043584	Zinc finger protein WIP	PANTHER	PTHR45878	ZINC FINGER PROTEIN WIP2	coord: 47..138
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 71..91 score: 9.140724
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 69..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G009920.1	CmaCh15G009920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity