Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCCATCTCCTCCGCCAATTCCGCTCCCTTCCTCCACTTCCATCCCATCTCCCCCTCCTCTCGCCGCCGCCGCCGGCTACCACTCTTCACTGTAATAGCCTCATCAAGAGGAGCCGACAGCAGCAGCAGCAACAATAACAACAACAATTACTACGCGAGCGGGAAGCTTGTGGACGAGAGCATGATCGTACTCCGGAAACGGATCCACGAAATCAAGATGGTCGAGCAGAGCCACGAACCCCCTTCCGATTGGCTCGACTGGGAGAAACGCTGCTACTCCGACTATGATTCACATATCTGTGAGGCTTTGGGCTATCTCCAATCCCACTTGATGAACACCAGGCCTAGCGTTTCCTTGGGAATTCTCCTTCTTATTACTCTCAGTGTTCCGCTCTCCTCCGCTGTCATTCTCCACCGCTTCATCGACATCGCCGCCGCGCTTCTCGCCGGAGTCCGTCTTACTTAA
mRNA sequence
ATGAAATCCATCTCCTCCGCCAATTCCGCTCCCTTCCTCCACTTCCATCCCATCTCCCCCTCCTCTCGCCGCCGCCGCCGGCTACCACTCTTCACTGTAATAGCCTCATCAAGAGGAGCCGACAGCAGCAGCAGCAACAATAACAACAACAATTACTACGCGAGCGGGAAGCTTGTGGACGAGAGCATGATCGTACTCCGGAAACGGATCCACGAAATCAAGATGGTCGAGCAGAGCCACGAACCCCCTTCCGATTGGCTCGACTGGGAGAAACGCTGCTACTCCGACTATGATTCACATATCTGTGAGGCTTTGGGCTATCTCCAATCCCACTTGATGAACACCAGGCCTAGCGTTTCCTTGGGAATTCTCCTTCTTATTACTCTCAGTGTTCCGCTCTCCTCCGCTGTCATTCTCCACCGCTTCATCGACATCGCCGCCGCGCTTCTCGCCGGAGTCCGTCTTACTTAA
Coding sequence (CDS)
ATGAAATCCATCTCCTCCGCCAATTCCGCTCCCTTCCTCCACTTCCATCCCATCTCCCCCTCCTCTCGCCGCCGCCGCCGGCTACCACTCTTCACTGTAATAGCCTCATCAAGAGGAGCCGACAGCAGCAGCAGCAACAATAACAACAACAATTACTACGCGAGCGGGAAGCTTGTGGACGAGAGCATGATCGTACTCCGGAAACGGATCCACGAAATCAAGATGGTCGAGCAGAGCCACGAACCCCCTTCCGATTGGCTCGACTGGGAGAAACGCTGCTACTCCGACTATGATTCACATATCTGTGAGGCTTTGGGCTATCTCCAATCCCACTTGATGAACACCAGGCCTAGCGTTTCCTTGGGAATTCTCCTTCTTATTACTCTCAGTGTTCCGCTCTCCTCCGCTGTCATTCTCCACCGCTTCATCGACATCGCCGCCGCGCTTCTCGCCGGAGTCCGTCTTACTTAA
Protein sequence
MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVDESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVSLGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Homology
BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match:
A0A6J1JZG1 (uncharacterized protein LOC111489262 OS=Cucurbita maxima OX=3661 GN=LOC111489262 PE=4 SV=1)
HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query: 1 MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD
Sbjct: 1 MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
Query: 61 ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS
Sbjct: 61 ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
Query: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 156
BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match:
A0A6J1FMN3 (uncharacterized protein LOC111445338 OS=Cucurbita moschata OX=3662 GN=LOC111445338 PE=4 SV=1)
HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 1 MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
MKSISSANSAPFLHFHPIS SSRRRRR PLFTV+ASSRGADS+SS NNNNYYASGKLVD
Sbjct: 1 MKSISSANSAPFLHFHPISSSSRRRRRPPLFTVMASSRGADSNSS--NNNNYYASGKLVD 60
Query: 61 ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
ESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV+
Sbjct: 61 ESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVA 120
Query: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 154
BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match:
A0A6J1JRY7 (uncharacterized protein LOC111487016 OS=Cucurbita maxima OX=3661 GN=LOC111487016 PE=4 SV=1)
HSP 1 Score: 208.8 bits (530), Expect = 1.7e-50
Identity = 113/154 (73.38%), Postives = 128/154 (83.12%), Query Frame = 0
Query: 3 SISSANSAPFLHFHPISPSSRRRRR-LPLFTVIASSRGADSSSSNNNNNNYYASGKLVDE 62
SI S +SAP L F PISPSS RRRR P FTV ASSR + + S N+YYA GKLVDE
Sbjct: 9 SIPSTHSAPLL-FPPISPSSHRRRRPPPAFTVTASSRPKEQADS----NSYYADGKLVDE 68
Query: 63 SMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVSL 122
SMIVLRKRIHEIK EQ+H+PP DW DWEKRCYS+YDS+ICEALGYLQSHLMNTRPSV+L
Sbjct: 69 SMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNICEALGYLQSHLMNTRPSVAL 128
Query: 123 GILLLITLSVPLSSAVILHRFIDIAAALLAGVRL 156
G+L L+TLSVP+SSAV+LHRFI+IA LLAG+RL
Sbjct: 129 GMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL 157
BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match:
A0A6J1GM73 (uncharacterized protein LOC111455246 OS=Cucurbita moschata OX=3662 GN=LOC111455246 PE=4 SV=1)
HSP 1 Score: 208.0 bits (528), Expect = 2.9e-50
Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 0
Query: 3 SISSANSAPFLHFHPISPSS-RRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVDE 62
SI S +SAP L F PISPS+ RRRRR P FTV ASS+ + + S N+YYA GKLVDE
Sbjct: 9 SIPSTHSAPLL-FPPISPSAHRRRRRPPAFTVTASSQPKEQADS----NSYYADGKLVDE 68
Query: 63 SMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVSL 122
SMIVLRKRIHEIK EQ+H+PP DW DWEKRCYS+YDS+ICEALGYLQSHLMNTRPSV+L
Sbjct: 69 SMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNICEALGYLQSHLMNTRPSVAL 128
Query: 123 GILLLITLSVPLSSAVILHRFIDIAAALLAGVRL 156
G+L L+TLSVP+SSAV+LHRFI+IA LLAG+RL
Sbjct: 129 GMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL 157
BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match:
A0A0A0KPI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571480 PE=4 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 3.9e-47
Identity = 108/154 (70.13%), Postives = 126/154 (81.82%), Query Frame = 0
Query: 1 MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIAS-SRGADSSSSN-NNNNNYYASGKL 60
M+SI+S + + F P + RR+ LP TV AS + ADS+++N NNNNNYYA GK+
Sbjct: 1 MESINSLSFSTPSLFSPAAHPHVRRKPLPAVTVRASREQAADSNNNNKNNNNNYYAGGKV 60
Query: 61 VDESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPS 120
VDESMIVLRKRIHEIKM EQ EPP+DWLDWEKR YSDYDSHICEALGYLQSHLMNTRPS
Sbjct: 61 VDESMIVLRKRIHEIKMAEQRQEPPADWLDWEKRWYSDYDSHICEALGYLQSHLMNTRPS 120
Query: 121 VSLGILLLITLSVPLSSAVILHRFIDIAAALLAG 153
V+LG+LLLI +SVPLSSA++LHRF+ IA ALLAG
Sbjct: 121 VALGMLLLIIISVPLSSALLLHRFLHIAVALLAG 154
BLAST of CmaCh15G009500 vs. NCBI nr
Match:
XP_022993164.1 (uncharacterized protein LOC111489262 [Cucurbita maxima])
HSP 1 Score: 301.2 bits (770), Expect = 5.1e-78
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query: 1 MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD
Sbjct: 1 MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
Query: 61 ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS
Sbjct: 61 ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
Query: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 156
BLAST of CmaCh15G009500 vs. NCBI nr
Match:
KAG6579243.1 (hypothetical protein SDJN03_23691, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 285.0 bits (728), Expect = 3.8e-73
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0
Query: 1 MKSISSANSAPFLHFHPISPSSRRRRRL-PLFTVIASSRGADSSSSNNNNNNYYASGKLV 60
MKSISSANSAPFLHFHPIS SSRRRRR PLFTV+ASSRGADS+S+NNNNNNYYASGKLV
Sbjct: 1 MKSISSANSAPFLHFHPISSSSRRRRRRPPLFTVMASSRGADSNSNNNNNNNYYASGKLV 60
Query: 61 DESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV 120
DESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV
Sbjct: 61 DESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV 120
Query: 121 SLGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
+LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 ALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
BLAST of CmaCh15G009500 vs. NCBI nr
Match:
XP_022939420.1 (uncharacterized protein LOC111445338 [Cucurbita moschata])
HSP 1 Score: 281.2 bits (718), Expect = 5.5e-72
Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 1 MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
MKSISSANSAPFLHFHPIS SSRRRRR PLFTV+ASSRGADS+SS NNNNYYASGKLVD
Sbjct: 1 MKSISSANSAPFLHFHPISSSSRRRRRPPLFTVMASSRGADSNSS--NNNNYYASGKLVD 60
Query: 61 ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
ESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV+
Sbjct: 61 ESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVA 120
Query: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 154
BLAST of CmaCh15G009500 vs. NCBI nr
Match:
KAG7016757.1 (hypothetical protein SDJN02_21867, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0
Query: 1 MKSISSANSAPFLHFHPISPSS--RRRRRLPLFTVIASSRGAD--SSSSNNNNNNYYASG 60
MKSISSANSAPFLHFHPIS SS RRRRR PLFTV+ASSRGAD S+S+NNNNNNYYASG
Sbjct: 1 MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASG 60
Query: 61 KLVDESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTR 120
KLVDESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTR
Sbjct: 61 KLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTR 120
Query: 121 PSVSLGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
PSV+LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 PSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 160
BLAST of CmaCh15G009500 vs. NCBI nr
Match:
XP_023551441.1 (uncharacterized protein LOC111809250 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 225.3 bits (573), Expect = 3.6e-55
Identity = 118/125 (94.40%), Postives = 123/125 (98.40%), Query Frame = 0
Query: 34 IASSRGADSSSS--NNNNNNYYASGKLVDESMIVLRKRIHEIKMVEQSHEPPSDWLDWEK 93
+ASSRGADSSSS NNNNNNYYASGKLVDESMIVLRKRIHE+KMVE+SHEPPS+WLDWEK
Sbjct: 1 MASSRGADSSSSNNNNNNNNYYASGKLVDESMIVLRKRIHEMKMVERSHEPPSNWLDWEK 60
Query: 94 RCYSDYDSHICEALGYLQSHLMNTRPSVSLGILLLITLSVPLSSAVILHRFIDIAAALLA 153
RCYSDYDSHICEALGYLQSHLMNTRPSV+LGILLLITLSVPLSSAVILHRFIDIAAALLA
Sbjct: 61 RCYSDYDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLA 120
Query: 154 GVRLT 157
GVRLT
Sbjct: 121 GVRLT 125
BLAST of CmaCh15G009500 vs. TAIR 10
Match:
AT2G01300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 134.8 bits (338), Expect = 5.9e-32
Identity = 75/151 (49.67%), Postives = 103/151 (68.21%), Query Frame = 0
Query: 5 SSANSAPFLHFHPISPSSR----RRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 64
SS S L FHP+ S R +++++ + A+S G D +YY G+LVD
Sbjct: 7 SSPPSISPLRFHPLVLSQRAIIPKKKKMTMRVSAAASSGKD---------HYYGGGRLVD 66
Query: 65 ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 124
E+MIVLRKRIHE+KMVE+++EPPS W+DWEKR Y+ YDS IC+++G LQS LMN+RP+V+
Sbjct: 67 ENMIVLRKRIHEMKMVERNYEPPSHWMDWEKRFYNSYDSVICDSVGLLQSFLMNSRPTVA 126
Query: 125 LGILLLITLSVPLSSAVILHRFIDIAAALLA 152
+ LL + +SVP+SS VI R ID+ LLA
Sbjct: 127 IATLLFLLVSVPVSSTVIAFRLIDLLHWLLA 148
BLAST of CmaCh15G009500 vs. TAIR 10
Match:
AT1G15010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits to 71 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 68/147 (46.26%), Postives = 93/147 (63.27%), Query Frame = 0
Query: 9 SAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVDESMIVLRK 68
S+ L FHP+ S R + G + + +YY G+ VDE+M+VLRK
Sbjct: 7 SSSTLRFHPLRTSQR------------IATGTNRRRTTTVCADYYRGGRTVDENMVVLRK 66
Query: 69 RIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVSLGILLLIT 128
RIHE+KMVE++ EPPS W+ WEKR Y +YD+ IC+AL LQ+ LMN+RPSV+ G LL+
Sbjct: 67 RIHEMKMVERNFEPPSHWMQWEKRFYCNYDATICDALTLLQTFLMNSRPSVAFGTCLLLL 126
Query: 129 LSVPLSSAVILHRFIDIAAALLAGVRL 156
+SVP+SSAV R +D+A LL V +
Sbjct: 127 VSVPVSSAVFAFRILDLALWLLDAVHV 141
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JZG1 | 2.5e-78 | 100.00 | uncharacterized protein LOC111489262 OS=Cucurbita maxima OX=3661 GN=LOC111489262... | [more] |
A0A6J1FMN3 | 2.7e-72 | 94.87 | uncharacterized protein LOC111445338 OS=Cucurbita moschata OX=3662 GN=LOC1114453... | [more] |
A0A6J1JRY7 | 1.7e-50 | 73.38 | uncharacterized protein LOC111487016 OS=Cucurbita maxima OX=3661 GN=LOC111487016... | [more] |
A0A6J1GM73 | 2.9e-50 | 72.73 | uncharacterized protein LOC111455246 OS=Cucurbita moschata OX=3662 GN=LOC1114552... | [more] |
A0A0A0KPI5 | 3.9e-47 | 70.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571480 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_022993164.1 | 5.1e-78 | 100.00 | uncharacterized protein LOC111489262 [Cucurbita maxima] | [more] |
KAG6579243.1 | 3.8e-73 | 94.90 | hypothetical protein SDJN03_23691, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022939420.1 | 5.5e-72 | 94.87 | uncharacterized protein LOC111445338 [Cucurbita moschata] | [more] |
KAG7016757.1 | 2.1e-71 | 93.13 | hypothetical protein SDJN02_21867, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023551441.1 | 3.6e-55 | 94.40 | uncharacterized protein LOC111809250 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT2G01300.1 | 5.9e-32 | 49.67 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G15010.1 | 1.2e-27 | 46.26 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |