CmaCh15G009500 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G009500
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr15: 5104470 .. 5104940 (+)
RNA-Seq ExpressionCmaCh15G009500
SyntenyCmaCh15G009500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCCATCTCCTCCGCCAATTCCGCTCCCTTCCTCCACTTCCATCCCATCTCCCCCTCCTCTCGCCGCCGCCGCCGGCTACCACTCTTCACTGTAATAGCCTCATCAAGAGGAGCCGACAGCAGCAGCAGCAACAATAACAACAACAATTACTACGCGAGCGGGAAGCTTGTGGACGAGAGCATGATCGTACTCCGGAAACGGATCCACGAAATCAAGATGGTCGAGCAGAGCCACGAACCCCCTTCCGATTGGCTCGACTGGGAGAAACGCTGCTACTCCGACTATGATTCACATATCTGTGAGGCTTTGGGCTATCTCCAATCCCACTTGATGAACACCAGGCCTAGCGTTTCCTTGGGAATTCTCCTTCTTATTACTCTCAGTGTTCCGCTCTCCTCCGCTGTCATTCTCCACCGCTTCATCGACATCGCCGCCGCGCTTCTCGCCGGAGTCCGTCTTACTTAA

mRNA sequence

ATGAAATCCATCTCCTCCGCCAATTCCGCTCCCTTCCTCCACTTCCATCCCATCTCCCCCTCCTCTCGCCGCCGCCGCCGGCTACCACTCTTCACTGTAATAGCCTCATCAAGAGGAGCCGACAGCAGCAGCAGCAACAATAACAACAACAATTACTACGCGAGCGGGAAGCTTGTGGACGAGAGCATGATCGTACTCCGGAAACGGATCCACGAAATCAAGATGGTCGAGCAGAGCCACGAACCCCCTTCCGATTGGCTCGACTGGGAGAAACGCTGCTACTCCGACTATGATTCACATATCTGTGAGGCTTTGGGCTATCTCCAATCCCACTTGATGAACACCAGGCCTAGCGTTTCCTTGGGAATTCTCCTTCTTATTACTCTCAGTGTTCCGCTCTCCTCCGCTGTCATTCTCCACCGCTTCATCGACATCGCCGCCGCGCTTCTCGCCGGAGTCCGTCTTACTTAA

Coding sequence (CDS)

ATGAAATCCATCTCCTCCGCCAATTCCGCTCCCTTCCTCCACTTCCATCCCATCTCCCCCTCCTCTCGCCGCCGCCGCCGGCTACCACTCTTCACTGTAATAGCCTCATCAAGAGGAGCCGACAGCAGCAGCAGCAACAATAACAACAACAATTACTACGCGAGCGGGAAGCTTGTGGACGAGAGCATGATCGTACTCCGGAAACGGATCCACGAAATCAAGATGGTCGAGCAGAGCCACGAACCCCCTTCCGATTGGCTCGACTGGGAGAAACGCTGCTACTCCGACTATGATTCACATATCTGTGAGGCTTTGGGCTATCTCCAATCCCACTTGATGAACACCAGGCCTAGCGTTTCCTTGGGAATTCTCCTTCTTATTACTCTCAGTGTTCCGCTCTCCTCCGCTGTCATTCTCCACCGCTTCATCGACATCGCCGCCGCGCTTCTCGCCGGAGTCCGTCTTACTTAA

Protein sequence

MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVDESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVSLGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Homology
BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match: A0A6J1JZG1 (uncharacterized protein LOC111489262 OS=Cucurbita maxima OX=3661 GN=LOC111489262 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0

Query: 1   MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
           MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD
Sbjct: 1   MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60

Query: 61  ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
           ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS
Sbjct: 61  ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120

Query: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
           LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 156

BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match: A0A6J1FMN3 (uncharacterized protein LOC111445338 OS=Cucurbita moschata OX=3662 GN=LOC111445338 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0

Query: 1   MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
           MKSISSANSAPFLHFHPIS SSRRRRR PLFTV+ASSRGADS+SS  NNNNYYASGKLVD
Sbjct: 1   MKSISSANSAPFLHFHPISSSSRRRRRPPLFTVMASSRGADSNSS--NNNNYYASGKLVD 60

Query: 61  ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
           ESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV+
Sbjct: 61  ESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVA 120

Query: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
           LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 154

BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match: A0A6J1JRY7 (uncharacterized protein LOC111487016 OS=Cucurbita maxima OX=3661 GN=LOC111487016 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.7e-50
Identity = 113/154 (73.38%), Postives = 128/154 (83.12%), Query Frame = 0

Query: 3   SISSANSAPFLHFHPISPSSRRRRR-LPLFTVIASSRGADSSSSNNNNNNYYASGKLVDE 62
           SI S +SAP L F PISPSS RRRR  P FTV ASSR  + + S    N+YYA GKLVDE
Sbjct: 9   SIPSTHSAPLL-FPPISPSSHRRRRPPPAFTVTASSRPKEQADS----NSYYADGKLVDE 68

Query: 63  SMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVSL 122
           SMIVLRKRIHEIK  EQ+H+PP DW DWEKRCYS+YDS+ICEALGYLQSHLMNTRPSV+L
Sbjct: 69  SMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNICEALGYLQSHLMNTRPSVAL 128

Query: 123 GILLLITLSVPLSSAVILHRFIDIAAALLAGVRL 156
           G+L L+TLSVP+SSAV+LHRFI+IA  LLAG+RL
Sbjct: 129 GMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL 157

BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match: A0A6J1GM73 (uncharacterized protein LOC111455246 OS=Cucurbita moschata OX=3662 GN=LOC111455246 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.9e-50
Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 0

Query: 3   SISSANSAPFLHFHPISPSS-RRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVDE 62
           SI S +SAP L F PISPS+ RRRRR P FTV ASS+  + + S    N+YYA GKLVDE
Sbjct: 9   SIPSTHSAPLL-FPPISPSAHRRRRRPPAFTVTASSQPKEQADS----NSYYADGKLVDE 68

Query: 63  SMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVSL 122
           SMIVLRKRIHEIK  EQ+H+PP DW DWEKRCYS+YDS+ICEALGYLQSHLMNTRPSV+L
Sbjct: 69  SMIVLRKRIHEIKTAEQTHDPPRDWFDWEKRCYSNYDSNICEALGYLQSHLMNTRPSVAL 128

Query: 123 GILLLITLSVPLSSAVILHRFIDIAAALLAGVRL 156
           G+L L+TLSVP+SSAV+LHRFI+IA  LLAG+RL
Sbjct: 129 GMLALLTLSVPVSSAVVLHRFIEIAVGLLAGIRL 157

BLAST of CmaCh15G009500 vs. ExPASy TrEMBL
Match: A0A0A0KPI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571480 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.9e-47
Identity = 108/154 (70.13%), Postives = 126/154 (81.82%), Query Frame = 0

Query: 1   MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIAS-SRGADSSSSN-NNNNNYYASGKL 60
           M+SI+S + +    F P +    RR+ LP  TV AS  + ADS+++N NNNNNYYA GK+
Sbjct: 1   MESINSLSFSTPSLFSPAAHPHVRRKPLPAVTVRASREQAADSNNNNKNNNNNYYAGGKV 60

Query: 61  VDESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPS 120
           VDESMIVLRKRIHEIKM EQ  EPP+DWLDWEKR YSDYDSHICEALGYLQSHLMNTRPS
Sbjct: 61  VDESMIVLRKRIHEIKMAEQRQEPPADWLDWEKRWYSDYDSHICEALGYLQSHLMNTRPS 120

Query: 121 VSLGILLLITLSVPLSSAVILHRFIDIAAALLAG 153
           V+LG+LLLI +SVPLSSA++LHRF+ IA ALLAG
Sbjct: 121 VALGMLLLIIISVPLSSALLLHRFLHIAVALLAG 154

BLAST of CmaCh15G009500 vs. NCBI nr
Match: XP_022993164.1 (uncharacterized protein LOC111489262 [Cucurbita maxima])

HSP 1 Score: 301.2 bits (770), Expect = 5.1e-78
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0

Query: 1   MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
           MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD
Sbjct: 1   MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60

Query: 61  ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
           ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS
Sbjct: 61  ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120

Query: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
           LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 156

BLAST of CmaCh15G009500 vs. NCBI nr
Match: KAG6579243.1 (hypothetical protein SDJN03_23691, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.0 bits (728), Expect = 3.8e-73
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0

Query: 1   MKSISSANSAPFLHFHPISPSSRRRRRL-PLFTVIASSRGADSSSSNNNNNNYYASGKLV 60
           MKSISSANSAPFLHFHPIS SSRRRRR  PLFTV+ASSRGADS+S+NNNNNNYYASGKLV
Sbjct: 1   MKSISSANSAPFLHFHPISSSSRRRRRRPPLFTVMASSRGADSNSNNNNNNNYYASGKLV 60

Query: 61  DESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV 120
           DESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV
Sbjct: 61  DESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV 120

Query: 121 SLGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
           +LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 ALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157

BLAST of CmaCh15G009500 vs. NCBI nr
Match: XP_022939420.1 (uncharacterized protein LOC111445338 [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 5.5e-72
Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0

Query: 1   MKSISSANSAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 60
           MKSISSANSAPFLHFHPIS SSRRRRR PLFTV+ASSRGADS+SS  NNNNYYASGKLVD
Sbjct: 1   MKSISSANSAPFLHFHPISSSSRRRRRPPLFTVMASSRGADSNSS--NNNNYYASGKLVD 60

Query: 61  ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 120
           ESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSV+
Sbjct: 61  ESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVA 120

Query: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
           LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 154

BLAST of CmaCh15G009500 vs. NCBI nr
Match: KAG7016757.1 (hypothetical protein SDJN02_21867, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0

Query: 1   MKSISSANSAPFLHFHPISPSS--RRRRRLPLFTVIASSRGAD--SSSSNNNNNNYYASG 60
           MKSISSANSAPFLHFHPIS SS  RRRRR PLFTV+ASSRGAD  S+S+NNNNNNYYASG
Sbjct: 1   MKSISSANSAPFLHFHPISSSSSRRRRRRPPLFTVMASSRGADSNSNSNNNNNNNYYASG 60

Query: 61  KLVDESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTR 120
           KLVDESMIVLRKRIHEIKMVE+SHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTR
Sbjct: 61  KLVDESMIVLRKRIHEIKMVERSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTR 120

Query: 121 PSVSLGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 157
           PSV+LGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT
Sbjct: 121 PSVALGILLLITLSVPLSSAVILHRFIDIAAALLAGVRLT 160

BLAST of CmaCh15G009500 vs. NCBI nr
Match: XP_023551441.1 (uncharacterized protein LOC111809250 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 3.6e-55
Identity = 118/125 (94.40%), Postives = 123/125 (98.40%), Query Frame = 0

Query: 34  IASSRGADSSSS--NNNNNNYYASGKLVDESMIVLRKRIHEIKMVEQSHEPPSDWLDWEK 93
           +ASSRGADSSSS  NNNNNNYYASGKLVDESMIVLRKRIHE+KMVE+SHEPPS+WLDWEK
Sbjct: 1   MASSRGADSSSSNNNNNNNNYYASGKLVDESMIVLRKRIHEMKMVERSHEPPSNWLDWEK 60

Query: 94  RCYSDYDSHICEALGYLQSHLMNTRPSVSLGILLLITLSVPLSSAVILHRFIDIAAALLA 153
           RCYSDYDSHICEALGYLQSHLMNTRPSV+LGILLLITLSVPLSSAVILHRFIDIAAALLA
Sbjct: 61  RCYSDYDSHICEALGYLQSHLMNTRPSVALGILLLITLSVPLSSAVILHRFIDIAAALLA 120

Query: 154 GVRLT 157
           GVRLT
Sbjct: 121 GVRLT 125

BLAST of CmaCh15G009500 vs. TAIR 10
Match: AT2G01300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 5.9e-32
Identity = 75/151 (49.67%), Postives = 103/151 (68.21%), Query Frame = 0

Query: 5   SSANSAPFLHFHPISPSSR----RRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVD 64
           SS  S   L FHP+  S R    +++++ +    A+S G D         +YY  G+LVD
Sbjct: 7   SSPPSISPLRFHPLVLSQRAIIPKKKKMTMRVSAAASSGKD---------HYYGGGRLVD 66

Query: 65  ESMIVLRKRIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVS 124
           E+MIVLRKRIHE+KMVE+++EPPS W+DWEKR Y+ YDS IC+++G LQS LMN+RP+V+
Sbjct: 67  ENMIVLRKRIHEMKMVERNYEPPSHWMDWEKRFYNSYDSVICDSVGLLQSFLMNSRPTVA 126

Query: 125 LGILLLITLSVPLSSAVILHRFIDIAAALLA 152
           +  LL + +SVP+SS VI  R ID+   LLA
Sbjct: 127 IATLLFLLVSVPVSSTVIAFRLIDLLHWLLA 148

BLAST of CmaCh15G009500 vs. TAIR 10
Match: AT1G15010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits to 71 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 68/147 (46.26%), Postives = 93/147 (63.27%), Query Frame = 0

Query: 9   SAPFLHFHPISPSSRRRRRLPLFTVIASSRGADSSSSNNNNNNYYASGKLVDESMIVLRK 68
           S+  L FHP+  S R             + G +   +     +YY  G+ VDE+M+VLRK
Sbjct: 7   SSSTLRFHPLRTSQR------------IATGTNRRRTTTVCADYYRGGRTVDENMVVLRK 66

Query: 69  RIHEIKMVEQSHEPPSDWLDWEKRCYSDYDSHICEALGYLQSHLMNTRPSVSLGILLLIT 128
           RIHE+KMVE++ EPPS W+ WEKR Y +YD+ IC+AL  LQ+ LMN+RPSV+ G  LL+ 
Sbjct: 67  RIHEMKMVERNFEPPSHWMQWEKRFYCNYDATICDALTLLQTFLMNSRPSVAFGTCLLLL 126

Query: 129 LSVPLSSAVILHRFIDIAAALLAGVRL 156
           +SVP+SSAV   R +D+A  LL  V +
Sbjct: 127 VSVPVSSAVFAFRILDLALWLLDAVHV 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JZG12.5e-78100.00uncharacterized protein LOC111489262 OS=Cucurbita maxima OX=3661 GN=LOC111489262... [more]
A0A6J1FMN32.7e-7294.87uncharacterized protein LOC111445338 OS=Cucurbita moschata OX=3662 GN=LOC1114453... [more]
A0A6J1JRY71.7e-5073.38uncharacterized protein LOC111487016 OS=Cucurbita maxima OX=3661 GN=LOC111487016... [more]
A0A6J1GM732.9e-5072.73uncharacterized protein LOC111455246 OS=Cucurbita moschata OX=3662 GN=LOC1114552... [more]
A0A0A0KPI53.9e-4770.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571480 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022993164.15.1e-78100.00uncharacterized protein LOC111489262 [Cucurbita maxima][more]
KAG6579243.13.8e-7394.90hypothetical protein SDJN03_23691, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022939420.15.5e-7294.87uncharacterized protein LOC111445338 [Cucurbita moschata][more]
KAG7016757.12.1e-7193.13hypothetical protein SDJN02_21867, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023551441.13.6e-5594.40uncharacterized protein LOC111809250 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT2G01300.15.9e-3249.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G15010.11.2e-2746.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33782:SF13MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNITcoord: 4..154
NoneNo IPR availablePANTHERPTHR33782OS01G0121600 PROTEINcoord: 4..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G009500.1CmaCh15G009500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane