CmaCh15G006320 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G006320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	thioredoxin M-type, chloroplastic-like
Location	Cma_Chr15: 2989329 .. 2990118 (-)
RNA-Seq Expression	CmaCh15G006320
Synteny	CmaCh15G006320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTAGATAACTGTGTTCAACTGAGCACCGCCGCCGCCACCGCCACCGCCATGTGCGCCACCACTCCCAGAATCAAATCTCATCCCTTTTGTTATAATCACCACCTAAACACAACCTTAACCCTTCAACGCAAATTGCCCATTTCCACTTCCGGAAACAAGTCCTTCTCCCCTTCTACCATCATTTCCACTTTCAGAAAATCCTTCTCCCTCTGTCGAGCTCGTGGCGCCGTCGATGATGGTTACTCTACTCTCCCGATTCATATTACATTGATTCTTCTCTGCTTTTGTGTTTGTGGGGTTTGCAAATTTGATGAGATTTTCCTTTCTTCGTGCAGTGCCGGAGGTGACAGAGTCGAGTTGGGACAGTTTGGTGTTCGGGAGTCAAAAGGCTGTGCTGGTGGAGTTTTGGGCGCCGTGGTGTGGACCTTGCAAGATCATTGAGCCTGTGATTAAGGATTTGGCACAGGAATATGCAGGCAAGATTGTGTGTTTGAAGCTCAATACAGATCTCAGCCCAAATGTGGCCTCAAAATATGGTATTAGAAGCATTCCCACGGTTCTGTTCTTCAAGAATGGAGAGAAAAGAGAGAGCGTCAGTGGGGCTGTGCCCAGATCCACCTTGGCCGCCACCATTGACAAGTATGCCGAGGTTTAATTTTGAAGAATCCCCCCATCATCGAACTCCATCAGAGATACCTTCCAATATTTTTCTTCTTCAGCTTGTAAAAATTGCAAAAAATTTATGGATCTCTTCTTCAATTCGACAATTTTCTTTTTGTTCTTC

mRNA sequence

ATGGCACTAGATAACTGTGTTCAACTGAGCACCGCCGCCGCCACCGCCACCGCCATGTGCGCCACCACTCCCAGAATCAAATCTCATCCCTTTTGTTATAATCACCACCTAAACACAACCTTAACCCTTCAACGCAAATTGCCCATTTCCACTTCCGGAAACAAGTCCTTCTCCCCTTCTACCATCATTTCCACTTTCAGAAAATCCTTCTCCCTCTGTCGAGCTCGTGGCGCCGTCGATGATGTGCCGGAGGTGACAGAGTCGAGTTGGGACAGTTTGGTGTTCGGGAGTCAAAAGGCTGTGCTGGTGGAGTTTTGGGCGCCGTGGTGTGGACCTTGCAAGATCATTGAGCCTGTGATTAAGGATTTGGCACAGGAATATGCAGGCAAGATTGTGTGTTTGAAGCTCAATACAGATCTCAGCCCAAATGTGGCCTCAAAATATGGTATTAGAAGCATTCCCACGGTTCTGTTCTTCAAGAATGGAGAGAAAAGAGAGAGCGTCAGTGGGGCTGTGCCCAGATCCACCTTGGCCGCCACCATTGACAAGTATGCCGAGGTTTAATTTTGAAGAATCCCCCCATCATCGAACTCCATCAGAGATACCTTCCAATATTTTTCTTCTTCAGCTTGTAAAAATTGCAAAAAATTTATGGATCTCTTCTTCAATTCGACAATTTTCTTTTTGTTCTTC

Coding sequence (CDS)

ATGGCACTAGATAACTGTGTTCAACTGAGCACCGCCGCCGCCACCGCCACCGCCATGTGCGCCACCACTCCCAGAATCAAATCTCATCCCTTTTGTTATAATCACCACCTAAACACAACCTTAACCCTTCAACGCAAATTGCCCATTTCCACTTCCGGAAACAAGTCCTTCTCCCCTTCTACCATCATTTCCACTTTCAGAAAATCCTTCTCCCTCTGTCGAGCTCGTGGCGCCGTCGATGATGTGCCGGAGGTGACAGAGTCGAGTTGGGACAGTTTGGTGTTCGGGAGTCAAAAGGCTGTGCTGGTGGAGTTTTGGGCGCCGTGGTGTGGACCTTGCAAGATCATTGAGCCTGTGATTAAGGATTTGGCACAGGAATATGCAGGCAAGATTGTGTGTTTGAAGCTCAATACAGATCTCAGCCCAAATGTGGCCTCAAAATATGGTATTAGAAGCATTCCCACGGTTCTGTTCTTCAAGAATGGAGAGAAAAGAGAGAGCGTCAGTGGGGCTGTGCCCAGATCCACCTTGGCCGCCACCATTGACAAGTATGCCGAGGTTTAA

Protein sequence

MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPSTIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVIKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAATIDKYAEV

Homology

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BLAST of CmaCh15G006320 vs. ExPASy Swiss-Prot
Match: P07591 (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-43
Identity = 95/192 (49.48%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLN--------TTLTLQRKLPISTS 60
           MA++NC+QLST+A+  T        +KSH     HHL         T   L+R  P  +S
Sbjct: 1   MAIENCLQLSTSASVGTV------AVKSHV----HHLQPSSKVNVPTFRGLKRSFPALSS 60

Query: 61  GNKSFSPSTIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGP 120
              S SP      FR S  +C+A  AV +V +V +SSW   V  S+  V+V+FWAPWCGP
Sbjct: 61  SVSSSSP----RQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGP 120

Query: 121 CKIIEPVIKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAV 180
           CK+I PVI +LA+EY+GKI   KLNTD +P +A++Y IRSIPTVLFFKNGE++ES+ GAV
Sbjct: 121 CKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAV 178

Query: 181 PRSTLAATIDKY 185
           P+STL  +I+KY
Sbjct: 181 PKSTLTDSIEKY 178

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BLAST of CmaCh15G006320 vs. ExPASy Swiss-Prot
Match: P48384 (Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-41
Identity = 75/113 (66.37%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 72  LCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVIKDLAQEYAGKI 131
           L  AR AV++V  V +SSWD LV GS+  VLV+FWAPWCGPC++I P+I +LA+EYAGKI
Sbjct: 59  LLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKI 118

Query: 132 VCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAATIDKY 185
            C KLNTD SPN A+KYGIRSIPTVLFFKNGE+++SV GAVP++TL+  ++KY
Sbjct: 119 KCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKY 171

[Close]

BLAST of CmaCh15G006320 vs. ExPASy Swiss-Prot
Match: Q9ZP20 (Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TRXM PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-40
Identity = 74/112 (66.07%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 73  CRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVIKDLAQEYAGKIV 132
           C+    VD+V    E +WDS+V GS+  VLVEFWAPWCGPC++I PVI +LA+EY GKI 
Sbjct: 58  CQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIK 117

Query: 133 CLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAATIDKY 185
           C K+NTD SPN+A+ YGIRSIPTVL FKNGEK+ESV GAVP++TLA  IDKY
Sbjct: 118 CCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKY 169

[Close]

BLAST of CmaCh15G006320 vs. ExPASy Swiss-Prot
Match: Q41864 (Thioredoxin M-type, chloroplastic OS=Zea mays OX=4577 GN=TRM1 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.1e-40
Identity = 75/118 (63.56%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 67  RKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVIKDLAQE 126
           R+   +C+++ AVD+V    E +WD LV   +  VLVEFWAPWCGPC++I PVI +LA++
Sbjct: 46  RRPRHVCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKD 105

Query: 127 YAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAATIDKY 185
           YAGKI C K+NTD SPNVAS YGIRSIPTVL FK GEK+ESV GAVP+STL   IDKY
Sbjct: 106 YAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKY 163

[Close]

BLAST of CmaCh15G006320 vs. ExPASy Swiss-Prot
Match: Q9ZP21 (Thioredoxin M-type, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-38
Identity = 71/125 (56.80%), Postives = 93/125 (74.40%), Query Frame = 0


Query: 60  STIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPV 119
           S +++  R S  +C+ +  VD+V    E +WD++V   +  VLVEFWAPWCGPC++I PV
Sbjct: 48  SALVAARRPSRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPV 107

Query: 120 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAA 179
           I +LA++Y GKI C K+NTD  PN+AS YGIRSIPTVL FK+GEK+ESV GAVP++TL  
Sbjct: 108 IDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCT 167

Query: 180 TIDKY 185
            IDKY
Sbjct: 168 IIDKY 172

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BLAST of CmaCh15G006320 vs. ExPASy TrEMBL
Match: A0A6J1K1I6 (thioredoxin M-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111489784 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.5e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60
           MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS
Sbjct: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60

Query: 61  TIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVI 120
           TIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVI
Sbjct: 61  TIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVI 120

Query: 121 KDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAAT 180
           KDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAAT
Sbjct: 121 KDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAAT 180

Query: 181 IDKYAEV 188
           IDKYAEV
Sbjct: 181 IDKYAEV 187

[Close]

BLAST of CmaCh15G006320 vs. ExPASy TrEMBL
Match: A0A6J1FFN6 (thioredoxin M5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445053 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 176/188 (93.62%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60
           MALDNCVQL TAAA A +MCATT R+KS+PFCYNHHLNTTLTL+RKLPISTSGNKSFSPS
Sbjct: 1   MALDNCVQLGTAAA-AASMCATTTRLKSYPFCYNHHLNTTLTLRRKLPISTSGNKSFSPS 60

Query: 61  TIISTFRKSFSL-CRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPV 120
           TIISTFRKSFSL CRARGAVDDVPEVTESSWDSLV GSQKAVLVEFWAPWCGPCKIIEPV
Sbjct: 61  TIISTFRKSFSLACRARGAVDDVPEVTESSWDSLVVGSQKAVLVEFWAPWCGPCKIIEPV 120

Query: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAA 180
           IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESV GAVPRSTLAA
Sbjct: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPRSTLAA 180

Query: 181 TIDKYAEV 188
           TIDKY EV
Sbjct: 181 TIDKYTEV 187

[Close]

BLAST of CmaCh15G006320 vs. ExPASy TrEMBL
Match: A0A6J1JL70 (uncharacterized protein LOC111486882 OS=Cucurbita maxima OX=3661 GN=LOC111486882 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.1e-67
Identity = 139/190 (73.16%), Postives = 155/190 (81.58%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQR--KLPISTSGNKSFS 60
           MALDNC+QLSTAA    AM  TT   KSHPF    H  TTL+LQR  K P S +  KSFS
Sbjct: 1   MALDNCIQLSTAA----AMYGTTSIPKSHPFSSTFHQKTTLSLQRLNKFPTSIARFKSFS 60

Query: 61  PSTIISTFRKSFSL-CRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIE 120
           PST +STF KS S+ C+ARGAVDDV EVTESSW+ LV  S+K VLVEFWAPWCGPCK+IE
Sbjct: 61  PSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIE 120

Query: 121 PVIKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTL 180
           PVI++LAQ+YAGKIVCLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE V GAVP+STL
Sbjct: 121 PVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTL 180

Query: 181 AATIDKYAEV 188
           +A+IDKY EV
Sbjct: 181 SASIDKYLEV 186

[Close]

BLAST of CmaCh15G006320 vs. ExPASy TrEMBL
Match: A0A6J1GXN7 (uncharacterized protein LOC111457772 OS=Cucurbita moschata OX=3662 GN=LOC111457772 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.1e-67
Identity = 139/190 (73.16%), Postives = 155/190 (81.58%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQR--KLPISTSGNKSFS 60
           MALDNC+QLSTAA    AM  TT   KSHPF    H   TL+LQR  K P ST+  KSFS
Sbjct: 1   MALDNCIQLSTAA----AMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFS 60

Query: 61  PSTIISTFRKSFSL-CRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIE 120
           PST +STF KS S+ C+ARGAVDDV EVTESSW+ LV  S+K VLVEFWAPWCGPCK+IE
Sbjct: 61  PSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIE 120

Query: 121 PVIKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTL 180
           PVI++LAQ+YAGKIVCLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE V GAVP+STL
Sbjct: 121 PVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTL 180

Query: 181 AATIDKYAEV 188
           +A+IDKY EV
Sbjct: 181 SASIDKYLEV 186

[Close]

BLAST of CmaCh15G006320 vs. ExPASy TrEMBL
Match: A0A6J1CJM4 (thioredoxin M-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111011915 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.5e-61
Identity = 125/189 (66.14%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTL---QRKLPISTSGNKSF 60
           MALD C+QLS+AAA        TP  K HPFC N++ NTTL+L   Q K P + + N  F
Sbjct: 1   MALDKCMQLSSAAA--------TPTPKPHPFCPNYYHNTTLSLLKPQNKFPSNCNSNLRF 60

Query: 61  SPSTIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIE 120
             ++     R S   C+ARGAVDDV EVTESSW+ +V GS+K VLVEFWAPWCGPC++IE
Sbjct: 61  RLASTFRNRRCSPVSCKARGAVDDVKEVTESSWEEMVVGSEKTVLVEFWAPWCGPCRMIE 120

Query: 121 PVIKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTL 180
           PVIK+LAQEYAGKIVCLKLNTD SPNVASKYGIRSIPTVLFF NG+KR+SV GAVP+STL
Sbjct: 121 PVIKELAQEYAGKIVCLKLNTDTSPNVASKYGIRSIPTVLFFNNGQKRDSVIGAVPKSTL 180

Query: 181 AATIDKYAE 187
           +ATIDKY +
Sbjct: 181 SATIDKYLQ 181

[Close]

BLAST of CmaCh15G006320 vs. NCBI nr
Match: XP_022993934.1 (thioredoxin M-type, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 377.9 bits (969), Expect = 5.2e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60
           MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS
Sbjct: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60

Query: 61  TIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVI 120
           TIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVI
Sbjct: 61  TIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVI 120

Query: 121 KDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAAT 180
           KDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAAT
Sbjct: 121 KDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAAT 180

Query: 181 IDKYAEV 188
           IDKYAEV
Sbjct: 181 IDKYAEV 187

[Close]

BLAST of CmaCh15G006320 vs. NCBI nr
Match: KAG7016445.1 (hypothetical protein SDJN02_21554 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.5 bits (911), Expect = 2.8e-94
Identity = 177/188 (94.15%), Postives = 181/188 (96.28%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60
           MALDNCVQL  AAATA +MCATTPR+KS+PFCYNHHLNTTLTL+RKLPISTSGNKSFSPS
Sbjct: 1   MALDNCVQLGAAAATAASMCATTPRLKSYPFCYNHHLNTTLTLRRKLPISTSGNKSFSPS 60

Query: 61  TIISTFRKSFSL-CRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPV 120
           TIISTFRKSFSL CRARGAVDDVPEVTESSWDSLV GSQKAVLVEFWAPWCGPCKIIEPV
Sbjct: 61  TIISTFRKSFSLACRARGAVDDVPEVTESSWDSLVVGSQKAVLVEFWAPWCGPCKIIEPV 120

Query: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAA 180
           IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESV GAVPRSTLAA
Sbjct: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPRSTLAA 180

Query: 181 TIDKYAEV 188
           TIDKY EV
Sbjct: 181 TIDKYTEV 188

[Close]

BLAST of CmaCh15G006320 vs. NCBI nr
Match: XP_023550329.1 (thioredoxin M-type, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.0 bits (907), Expect = 8.0e-94
Identity = 177/188 (94.15%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60
           MALDNCVQL TAAA   AMCATTPR+KS+PFCYNHH NTTLTLQRKLPISTSGNKSFSPS
Sbjct: 1   MALDNCVQLGTAAAATAAMCATTPRLKSYPFCYNHHPNTTLTLQRKLPISTSGNKSFSPS 60

Query: 61  TIISTFRKSFSL-CRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPV 120
           TIISTFRKSFSL CRARGAVDDVPEVTESSWDSLV GSQKAVLVEFWAPWCGPCKIIEPV
Sbjct: 61  TIISTFRKSFSLACRARGAVDDVPEVTESSWDSLVVGSQKAVLVEFWAPWCGPCKIIEPV 120

Query: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAA 180
           IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESV GAVPRSTLAA
Sbjct: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPRSTLAA 180

Query: 181 TIDKYAEV 188
           TIDKY EV
Sbjct: 181 TIDKYTEV 188

[Close]

BLAST of CmaCh15G006320 vs. NCBI nr
Match: KAG6578924.1 (hypothetical protein SDJN03_23372, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.4 bits (903), Expect = 2.3e-93
Identity = 175/188 (93.09%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60
           MALDNCVQL  AAA A +MCATTPR+KS+PFCYNHHLNTTLTL+RKLPISTSGNKSFSPS
Sbjct: 1   MALDNCVQLGAAAAAAASMCATTPRLKSYPFCYNHHLNTTLTLRRKLPISTSGNKSFSPS 60

Query: 61  TIISTFRKSFSL-CRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPV 120
           TIISTFRKSFSL CRARGAVDDVPEVTESSWDSLV GSQKAVLVEFWAPWCGPCKIIEPV
Sbjct: 61  TIISTFRKSFSLACRARGAVDDVPEVTESSWDSLVVGSQKAVLVEFWAPWCGPCKIIEPV 120

Query: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAA 180
           IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESV GAVPRSTLAA
Sbjct: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPRSTLAA 180

Query: 181 TIDKYAEV 188
           TIDKY +V
Sbjct: 181 TIDKYTQV 188

[Close]

BLAST of CmaCh15G006320 vs. NCBI nr
Match: XP_022939027.1 (thioredoxin M5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 348.2 bits (892), Expect = 4.4e-92
Identity = 176/188 (93.62%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MALDNCVQLSTAAATATAMCATTPRIKSHPFCYNHHLNTTLTLQRKLPISTSGNKSFSPS 60
           MALDNCVQL TAAA A +MCATT R+KS+PFCYNHHLNTTLTL+RKLPISTSGNKSFSPS
Sbjct: 1   MALDNCVQLGTAAA-AASMCATTTRLKSYPFCYNHHLNTTLTLRRKLPISTSGNKSFSPS 60

Query: 61  TIISTFRKSFSL-CRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPV 120
           TIISTFRKSFSL CRARGAVDDVPEVTESSWDSLV GSQKAVLVEFWAPWCGPCKIIEPV
Sbjct: 61  TIISTFRKSFSLACRARGAVDDVPEVTESSWDSLVVGSQKAVLVEFWAPWCGPCKIIEPV 120

Query: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAA 180
           IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESV GAVPRSTLAA
Sbjct: 121 IKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPRSTLAA 180

Query: 181 TIDKYAEV 188
           TIDKY EV
Sbjct: 181 TIDKYTEV 187

[Close]

BLAST of CmaCh15G006320 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 64/135 (47.41%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 56  SFSPSTIISTFRKSFS------LCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPW 115
           S SP+++ S  +   S      +C A+    D+  V +S+WDSLV  +   V+V+FWAPW
Sbjct: 50  SLSPASLTSIHQPRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPW 109

Query: 116 CGPCKIIEPVIKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVS 175
           CGPCK+I+P++ DLAQ Y GKI   KLNTD SPN   +YG+RSIPT++ F  GEK++++ 
Sbjct: 110 CGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTII 169

Query: 176 GAVPRSTLAATIDKY 185
           GAVP++TL +++DK+
Sbjct: 170 GAVPKTTLTSSLDKF 184

[Close]

BLAST of CmaCh15G006320 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34
Identity = 61/129 (47.29%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 56  SFSPSTIISTFRKSFSLCRARGAVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKI 115
           S S ++ +S  R+   +C A+     +P V +S+WDSLV  + + V V+FWAPWCGPCK+
Sbjct: 51  SLSKNSRVSRLRRGV-ICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKM 110

Query: 116 IEPVIKDLAQEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRS 175
           I+P++ +LAQ+YAG+    KLNTD SP    +YG+RSIPT++ F NGEK++++ GAV + 
Sbjct: 111 IDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKD 170

Query: 176 TLAATIDKY 185
           TLA +I+K+
Sbjct: 171 TLATSINKF 178

[Close]

BLAST of CmaCh15G006320 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 58/107 (54.21%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 78  AVDDVPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVIKDLAQEYAGKIVCLKLN 137
           A  +VP +++S W + V  S   VLVEFWAPWCGPC++I P++  LA+++AGK    K+N
Sbjct: 84  AAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKIN 143

Query: 138 TDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAATIDKY 185
           TD SPN A++YGIRS+PTV+ FK GEK++S+ GAVPR TL  TI+++
Sbjct: 144 TDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERF 190

[Close]

BLAST of CmaCh15G006320 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.2e-24
Identity = 63/168 (37.50%), Postives = 94/168 (55.95%), Query Frame = 0


Query: 28  SHPFCYN----HHLNTTLTLQRKLPISTSGNKSFSPSTIISTFRKSF---SLCRARGA-- 87
           S   C+N    H      +  R  P++     SFSP ++  + R+S    S  R R +  
Sbjct: 7   SSSICFNPTRFHTARHISSPSRLFPVT-----SFSPRSLRFSDRRSLLSSSASRLRLSPL 66

Query: 88  -VDD--VPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVIKDLAQEYAGKIVCLK 147
            V D    EVT+ SW+  V  S+  VLVEF+  WCGPC+++  +I ++A +YAGK+ C  
Sbjct: 67  CVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYL 126

Query: 148 LNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAATIDK 184
           LN D    VA +Y I+++P VL FKNGEKRES+ G +P+    + I++
Sbjct: 127 LNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIER 169

[Close]

BLAST of CmaCh15G006320 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-24
Identity = 63/169 (37.28%), Postives = 94/169 (55.62%), Query Frame = 0


Query: 28  SHPFCYN----HHLNTTLTLQRKLPISTSGNKSFSPSTIISTFRKSF---SLCRARGA-- 87
           S   C+N    H      +  R  P++     SFSP ++  + R+S    S  R R +  
Sbjct: 7   SSSICFNPTRFHTARHISSPSRLFPVT-----SFSPRSLRFSDRRSLLSSSASRLRLSPL 66

Query: 88  -VDD---VPEVTESSWDSLVFGSQKAVLVEFWAPWCGPCKIIEPVIKDLAQEYAGKIVCL 147
            V D     EVT+ SW+  V  S+  VLVEF+  WCGPC+++  +I ++A +YAGK+ C 
Sbjct: 67  CVRDSRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCY 126

Query: 148 KLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVSGAVPRSTLAATIDK 184
            LN D    VA +Y I+++P VL FKNGEKRES+ G +P+    + I++
Sbjct: 127 LLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIER 170

The following BLAST results are available for this feature:

BLAST of CmaCh15G006320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P07591	1.8e-43	49.48	Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2	[more]
P48384	3.7e-41	66.37	Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9ZP20	1.8e-40	66.07	Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TRXM P...	[more]
Q41864	4.1e-40	63.56	Thioredoxin M-type, chloroplastic OS=Zea mays OX=4577 GN=TRM1 PE=2 SV=1	[more]
Q9ZP21	1.0e-38	56.80	Thioredoxin M-type, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1	[more]

BLAST of CmaCh15G006320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1I6	2.5e-101	100.00	thioredoxin M-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114897...	[more]
A0A6J1FFN6	2.1e-92	93.62	thioredoxin M5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445053...	[more]
A0A6J1JL70	3.1e-67	73.16	uncharacterized protein LOC111486882 OS=Cucurbita maxima OX=3661 GN=LOC111486882...	[more]
A0A6J1GXN7	3.1e-67	73.16	uncharacterized protein LOC111457772 OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]
A0A6J1CJM4	2.5e-61	66.14	thioredoxin M-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CmaCh15G006320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993934.1	5.2e-101	100.00	thioredoxin M-type, chloroplastic-like [Cucurbita maxima]	[more]
KAG7016445.1	2.8e-94	94.15	hypothetical protein SDJN02_21554 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023550329.1	8.0e-94	94.15	thioredoxin M-type, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG6578924.1	2.3e-93	93.09	hypothetical protein SDJN03_23372, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022939027.1	4.4e-92	93.62	thioredoxin M5, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of CmaCh15G006320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03520.1	1.8e-35	47.41	Thioredoxin superfamily protein	[more]
AT1G03680.1	1.5e-34	47.29	thioredoxin M-type 1	[more]
AT3G15360.1	2.2e-33	54.21	thioredoxin M-type 4	[more]
AT2G15570.1	3.2e-24	37.50	Thioredoxin superfamily protein	[more]
AT2G15570.2	4.2e-24	37.28	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 109..118 score: 63.28 coord: 149..160 score: 44.63 coord: 101..109 score: 64.57
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 82..186 e-value: 1.3E-33 score: 117.2
None	No IPR available	PANTHER	PTHR45663:SF34	THIOREDOXIN M-TYPE PROTEIN	coord: 56..184
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 56..184
None	No IPR available	CDD	cd02947	TRX_family	coord: 88..182 e-value: 6.88931E-37 score: 121.511
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 83..183 e-value: 9.9E-31 score: 105.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 61..186 score: 15.083041
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 86..183 e-value: 2.5E-34 score: 115.4
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 102..120
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 70..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G006320.1	CmaCh15G006320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity