CmaCh15G005890 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G005890
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr15: 2781742 .. 2784490 (+)
RNA-Seq ExpressionCmaCh15G005890
SyntenyCmaCh15G005890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCACACGGCAGCGGTTTTCCGGTCTCCCGTTCGATCCGACGTTTGAGCTCCCTGAGTACTCGAACTTGGCTCAGCTTCTCAGGAGACAACATTTCCCAGTAAATGCCTGCAATTCAGAACAATTTGGGGTGTTATATGAGACTCTCTTAATTGATATTTGACAAACTTGTTCATAAACTCATGTCCCTCCAATCTCGAGAAATCTTTTGAAATATGAAAAGAAAAGACATCTTTAGTAGGAAAAAATTTGACTTGAAGTTCTACAATTATTGAATATAGATGCAGGCACCTGAAATAACAGGACTTGTATTTCAAGAGGGGAGTTTGGCATGGATAAAGCAAAGCTGCTAACCTTGGGGTTTAGGGATTTTCGTGTTGGTTAAAATGACCTGCGTTGGTGTGCATACGATGTCTACGGGCACGTCGTGGACTAATAGCTTCTCAACTGGAATATCATCAACCAACTGGCAATCATGCACTGCAAGCCATCGGAAGTTCGTATTACGACATGATATTTGATAAACATGTATAACCCAAAAGCACAAAGACTATATAACGGCCCAAGCCCACCGCTAGCAGGTATTGTCCTCTTTGGGTTTTCTCTTTTGGGGTTTCTCTCAAAGGTTTTAAAACGTGTCTACTAGAAAGAAGTTTCTACACTCTTATATAGAATGTTTCGTTTTCGTGTCCAACCGATGTGGGATCTCACAAAGACACTATGAACTTTTAAAATGTCTCAATGACATGTAAGCTATCAATTTGTACCTAAACTTCTGGTTGTTTACCAACAGCTCTCTGCACATGTATTATCTCAACAGCTCGACATATGGTATCTCGACCGATAATTTGAAAACAAGCTCTCTTTTATTGAGGATGGGGAGGTCTGAAAATAATATATATTGGGAAATTAACTGCTAAACTATCTACATGGATAAAATTGCACGATCGAAGTTCACTGTAAAGAATATTTTGATATCAAGCACTGAAATTTATCAACACAACATCATGTTGCTGAAAATAATAAAAAGAATGAGATGCTACAAGATAAGATAGAAGCAGGGTAGTTATACAACCAGAAGTAACAATTGGAGTCGAGTCATCAATGGCGCCCATGTACCGAAGCATTCCATATTCCAGTTCTGCAAATCCCTGCACTTAGTGGAGGTTAAATTATAAGTTTGGTTTATAAACTTTTAGAGTTTGTTTGAATCGAGTAAAGAAACATAGATAGAATCAAGTATACTCGTTCCATTGCATAAGAGGGCTTGTTCGAATTCACTTTCTAAGGGCTTAAAAACACTTTGTTTAAGCACGTTATTTCAAACAGACCCTTAATCAATACATTCCATTTCCAAAGTGGCAAAACCGAGGATTATCAAATCTTCCGAGCAAATATGTTTTAAGCCAACAGTAACACTTTTACCTCACCCTTGCCAAGGCGAGCACCTGTTCTGGGATCAACAGCAACAGAGCCAATGACGATCAGATCGACTTTGATCTTTTCATCAAGTCCAATTGGCTCTCCATACTTTGCTACCCCAACAGAAGTGCAGGCCTCCTTGATGGTAGCAGAAGTCAGCATTCCGGATTCGACTATGGAGAAAAAACCTGTTCTCAACCGAGGCTGAGGTGTCAATAGTTTTTTGCCACCTGATCATAATCAAAATACAATTTAGTTTGTGATTTAACCTGAAAAAATCTGTCATGCTTGTCATGCTTGTCAAGAATCAAAGATGATACATACGATTCAGTGGAAGTTTACATTGTATTGATTCAACGTAACAGCCCAAGCCTACCGCTAGTAGATATTGTCTTCTTTGGGCTTTCCCTTCAAGGGCTTCCCCTTGAGGTTTTAAAACACGTCTACTAGGAAGAGGTTTCTACACCCTTATACGGAATGCTTCATTGTCTTCTACAACCGATGTGGGATCTCACTTTCAACCACCTCAAAATGATAACTAAATTGGACTACGTAGTCCACACATCCAACCACCACGTTTGCCAATAGAAATTCATAATTTCAGATCTTTATTAGTTTTAGTAATAAACTAAACTAAGACATGAACAGTTGACACATTTTGAAGTTTCCCCTCACATCACTTGGGCTTTGTAAGATTCGAATCCAACATCCTTGAGTGAACTCTGTTCTTGATAATCACTACAGGGTTGTGCAGAAAAGCAAAAAATGTATTGTTCACTTGCATTGAAACATAGTCTCTTGACGATATTGTAAATGGCAGACAGTGGTAGATATTTCATTAAAAGTATCAGCAGAACTGACCCATAAGTGTAAGAAGCCTCACACCCTTCTGAGGTGAATCCGGATTAACCTTCACGCACTGCGAATCCCTGAATACTTCCAAATCGCACAACTGATACAACTCCATTTCATCAGGTATATACGGAAGGAATCAAAATTTCCAACACTGAAAAGATCGACTCAAACATTTAATTTACAACAAAACAATTCAGGAATTAAGGAGCTCACTCTGTTAGCAGCTTCCATGGCGCCGACAAAATTAGGGATTCGATGATGAACAGGTCGGGGATTAGCAGCAATGTTTAGAGATTCCATAAAATCCCAGATTCGTTTCCGGATCACCCACTTCCAAGCTTTCGGATCGTCGTCCGAAGCGCCTTCAGTGTCCCTTACAGAAGCTTCGGCCATGGATTTCATAGCTAGGGCGTCGAGGCGAGATCTCTCCGCCTCGAATGCAGCTTCGTCGAAAGCGCCTTCGCGTTGA

mRNA sequence

ATGGGCCACACGGCAGCGGTTTTCCGGTCTCCCGTTCGATCCGACGCACCTGAAATAACAGGACTTGCGAGCACCTGTTCTGGGATCAACAGCAACAGAGCCAATGACGATCAGATCGACTTTGATCTTTTCATCAAGTCCAATTGGCTCTCCATACTTTGCTACCCCAACAGAAGTGCAGGCCTCCTTGATGGTAGCAGAAGTCAGCATTCCGGATTCGACTATGGAGAAAAAACCTGTTCTCAACCGAGGCTGAGCTTCCATGGCGCCGACAAAATTAGGGATTCGATGATGAACAGGTCGGGGATTAGCAGCAATATTCGTTTCCGGATCACCCACTTCCAAGCTTTCGGATCGTCGTCCGAAGCGCCTTCAGTGTCCCTTACAGAAGCTTCGGCCATGGATTTCATAGCTAGGGCGTCGAGGCGAGATCTCTCCGCCTCGAATGCAGCTTCGTCGAAAGCGCCTTCGCGTTGA

Coding sequence (CDS)

ATGGGCCACACGGCAGCGGTTTTCCGGTCTCCCGTTCGATCCGACGCACCTGAAATAACAGGACTTGCGAGCACCTGTTCTGGGATCAACAGCAACAGAGCCAATGACGATCAGATCGACTTTGATCTTTTCATCAAGTCCAATTGGCTCTCCATACTTTGCTACCCCAACAGAAGTGCAGGCCTCCTTGATGGTAGCAGAAGTCAGCATTCCGGATTCGACTATGGAGAAAAAACCTGTTCTCAACCGAGGCTGAGCTTCCATGGCGCCGACAAAATTAGGGATTCGATGATGAACAGGTCGGGGATTAGCAGCAATATTCGTTTCCGGATCACCCACTTCCAAGCTTTCGGATCGTCGTCCGAAGCGCCTTCAGTGTCCCTTACAGAAGCTTCGGCCATGGATTTCATAGCTAGGGCGTCGAGGCGAGATCTCTCCGCCTCGAATGCAGCTTCGTCGAAAGCGCCTTCGCGTTGA

Protein sequence

MGHTAAVFRSPVRSDAPEITGLASTCSGINSNRANDDQIDFDLFIKSNWLSILCYPNRSAGLLDGSRSQHSGFDYGEKTCSQPRLSFHGADKIRDSMMNRSGISSNIRFRITHFQAFGSSSEAPSVSLTEASAMDFIARASRRDLSASNAASSKAPSR
Homology
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BLAST of CmaCh15G005890 vs. ExPASy TrEMBL
Match: A0A0A0K9I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055970 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 107 IRFRITHFQAFGSSSEAPSVSLTEASAMDFIARASRRDLSASNAASSKAPSR 159
           +RFR+THFQAFGSSSEAPSVSL EASA+DF+A ASRRDLSASNA SSK  SR
Sbjct: 1   MRFRMTHFQAFGSSSEAPSVSLIEASAIDFLAWASRRDLSASNAGSSKGGSR 52

The following BLAST results are available for this feature:
BLAST of CmaCh15G005890 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh15G005890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9I11.3e-1082.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055970 PE=4 SV=1[more]
BLAST of CmaCh15G005890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CmaCh15G005890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G005890.1CmaCh15G005890.1mRNA