CmaCh14G021600 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G021600
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionNTP_transf_2 domain-containing protein
LocationCma_Chr14: 14825534 .. 14826947 (+)
RNA-Seq ExpressionCmaCh14G021600
SyntenyCmaCh14G021600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATATTTATTGGTGATTATGATTTGAACTTTTCCAAACACGATGTTCCAGCAGAACTCTGGGAGCCTTTTGATGGACTTCCTTTACTTTGGGTAAGCTTGACTCTCTTTATTATTATCGTTATTATGTCTTTCCGCGAAAACTAGTATCACTAACCAAAAGGGAAAAAGATAACTGGAGTTGAGTTTCTAAGTCCAGTTATTTTTGCACTACAATAGTGGACTGTAACTTCAACGTGCATGTGTTAAAGTAGAATCGTTTACTTTTATTTCAGGAATGTATTTGATTCTTGTCAAATGCGTATTTTAATGCAGGGGAGCAGAGCCTATATAAAGAGGGAAAGGGGATACAGGTACGCCATTTCTTAGTACTATCGATGCATTTATGAGTAAGTTATAACTGTTAACTACATTCCATTTTTTATGTAGCATTGATCCTTTGCATATTGATGATCCTCTTTTCCCCATGAATAATGTTGGACGAAATTGTTTCTGCTTTCATCAATGTATCTAGGTGAGGCCTCTAATAGAAGTAGCCAATGCAGTTTTTTTTCCTGCTGTCAACCTAGATTGGATGGTCTTCTTGTAATTCTTGTATCTCTCTCTGTCTCGAGGAGGGGACACCTTGTTCCCTTCCCCTTTAGGTCGTTCTTTGGTTTTTGTGGATTGAGGTCAGTTGTTTCTTGACAGAAATGTATCAATGTGAGAAGTCTGTCCTGTTGGCATTATTTACTGTCAACTTTAGAATCATGGTGCGGATAGGAAGTATTTTACGTAACTTTAATATGGTTCTCAGCTTAGAAAAATCACTTACACGGTGCAATCTCTAGTTTGTTGGGAAAAACTTCATACCGTGAACCAAATTTTTTAATTTATATAAATATAATAATAAAATAATAATGTGAGTAATGGGATAAATCTATTTTTTAATTTTATTGTAAATATAAAATAATAATGTGCAACAATTTTTTCATTTAAATAATATATTATATAATATTATTTATAATTATTTTTTTTATTTGTAAAAGTAGTCGAAATTCCACCTTCCAAAGATTGGTTATTTTTTATTTCATCTTGTTTGGTGGTAACTTCTTTGTTTATTTTGAACTCTAATGCTTACTCTGACACATTTTATACCCAAGTGTTCAATATGTCTGAAAAAATTATTCTTTTTATACTCACGTCCTGAATTACGTCTCGGATCCCGGGTCATTAGATAGGAATCCGAGAATGAAGAGAGAAACAAAGAATATTATTACTATATAAACAAATAGTTTTAGAATACGCATTACACTATTCTCCAAATATTTTTTTTAGGGAAGTTATTTTGAAAATTTTTTAAGCTTGAGCAGACATAAATACCTTTGTTGACCGAGGGCCTCTTTTCCAGCTTATTTTTTTCCTTGCCTGA

mRNA sequence

ATGGTTATATTTATTGGTGATTATGATTTGAACTTTTCCAAACACGATGTTCCAGCAGAACTCTGGGAGCCTTTTGATGGACTTCCTTTACTTTGGGGGAGCAGAGCCTATATAAAGAGGGAAAGGGGATACAGCATTGATCCTTTGCATATTGATGATCCTCTTTTCCCCATGAATAATGTTGGACGAAATTGTTTCTGCTTTCATCAATACATAAATACCTTTGTTGACCGAGGGCCTCTTTTCCAGCTTATTTTTTTCCTTGCCTGA

Coding sequence (CDS)

ATGGTTATATTTATTGGTGATTATGATTTGAACTTTTCCAAACACGATGTTCCAGCAGAACTCTGGGAGCCTTTTGATGGACTTCCTTTACTTTGGGGGAGCAGAGCCTATATAAAGAGGGAAAGGGGATACAGCATTGATCCTTTGCATATTGATGATCCTCTTTTCCCCATGAATAATGTTGGACGAAATTGTTTCTGCTTTCATCAATACATAAATACCTTTGTTGACCGAGGGCCTCTTTTCCAGCTTATTTTTTTCCTTGCCTGA

Protein sequence

MVIFIGDYDLNFSKHDVPAELWEPFDGLPLLWGSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTFVDRGPLFQLIFFLA
Homology
[Close]
BLAST of CmaCh14G021600 vs. ExPASy TrEMBL
Match: A0A6J1E9B4 (uncharacterized protein LOC111431966 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111431966 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYI 73
            GS  YIKRERGYSIDPLHIDDPLFPMNNVGRNCFC HQ I
Sbjct: 1469 GSGVYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCIHQCI 1508

[Close]
BLAST of CmaCh14G021600 vs. ExPASy TrEMBL
Match: A0A6J1IWC2 (uncharacterized protein LOC111479179 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479179 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.9e-13
Identity = 36/43 (83.72%), Postives = 36/43 (83.72%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTF 76
            GS  YIKRERGYSIDPLHIDDPLFPMNNVGRNCF  HQ I  F
Sbjct: 1469 GSGVYIKRERGYSIDPLHIDDPLFPMNNVGRNCFRIHQCIKAF 1511

[Close]
BLAST of CmaCh14G021600 vs. ExPASy TrEMBL
Match: A0A6J1EM40 (uncharacterized protein LOC111435527 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435527 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.9e-13
Identity = 36/43 (83.72%), Postives = 36/43 (83.72%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTF 76
            GS  YIKRERGYSIDPLHIDDPLFPMNNVGRNCF  HQ I  F
Sbjct: 1440 GSGVYIKRERGYSIDPLHIDDPLFPMNNVGRNCFRIHQCIKAF 1482

[Close]
BLAST of CmaCh14G021600 vs. ExPASy TrEMBL
Match: A0A6J1IWQ8 (uncharacterized protein LOC111479179 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479179 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.9e-13
Identity = 36/43 (83.72%), Postives = 36/43 (83.72%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTF 76
            GS  YIKRERGYSIDPLHIDDPLFPMNNVGRNCF  HQ I  F
Sbjct: 1467 GSGVYIKRERGYSIDPLHIDDPLFPMNNVGRNCFRIHQCIKAF 1509

[Close]
BLAST of CmaCh14G021600 vs. ExPASy TrEMBL
Match: A0A6J1IFP5 (uncharacterized protein LOC111472892 OS=Cucurbita maxima OX=3661 GN=LOC111472892 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.9e-13
Identity = 36/43 (83.72%), Postives = 36/43 (83.72%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTF 76
            GS  YIKRERGYSIDPLHIDDPLFPMNNVGRNCF  HQ I  F
Sbjct: 1440 GSGVYIKRERGYSIDPLHIDDPLFPMNNVGRNCFRIHQCIKAF 1482

[Close]
BLAST of CmaCh14G021600 vs. NCBI nr
Match: XP_022924484.1 (uncharacterized protein LOC111431966 isoform X5 [Cucurbita moschata])

HSP 1 Score: 85.1 bits (209), Expect = 3.3e-13
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYI 73
            GS  YIKRERGYSIDPLHIDDPLFPMNNVGRNCFC HQ I
Sbjct: 1469 GSGVYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCIHQCI 1508

[Close]
BLAST of CmaCh14G021600 vs. NCBI nr
Match: XP_030535309.1 (uncharacterized protein LOC115744335 isoform X2 [Rhodamnia argentea])

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-12
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0 

Query: 21   LWEPFDGLPLLWGSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTFVD 78
            +++P D    + GS  Y+KRERGYSIDP+HIDDPLFPMNNVGRNCF  HQ I  F +
Sbjct: 1435 VFDPRDMRVSVRGSGLYLKRERGYSIDPIHIDDPLFPMNNVGRNCFRVHQCIKAFAE 1491

[Close]
BLAST of CmaCh14G021600 vs. NCBI nr
Match: XP_030535306.1 (uncharacterized protein LOC115744335 isoform X1 [Rhodamnia argentea] >XP_030535307.1 uncharacterized protein LOC115744335 isoform X1 [Rhodamnia argentea] >XP_030535308.1 uncharacterized protein LOC115744335 isoform X1 [Rhodamnia argentea])

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-12
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0 

Query: 21   LWEPFDGLPLLWGSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTFVD 78
            +++P D    + GS  Y+KRERGYSIDP+HIDDPLFPMNNVGRNCF  HQ I  F +
Sbjct: 1471 VFDPRDMRVSVRGSGLYLKRERGYSIDPIHIDDPLFPMNNVGRNCFRVHQCIKAFAE 1527

[Close]
BLAST of CmaCh14G021600 vs. NCBI nr
Match: XP_023527225.1 (uncharacterized protein LOC111790524 isoform X12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-12
Identity = 36/43 (83.72%), Postives = 36/43 (83.72%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTF 76
            GS  YIKRERGYSIDPLHIDDPLFPMNNVGRNCF  HQ I  F
Sbjct: 1182 GSGVYIKRERGYSIDPLHIDDPLFPMNNVGRNCFRIHQCIKAF 1224

[Close]
BLAST of CmaCh14G021600 vs. NCBI nr
Match: XP_022979477.1 (uncharacterized protein LOC111479179 isoform X1 [Cucurbita maxima] >XP_022979478.1 uncharacterized protein LOC111479179 isoform X1 [Cucurbita maxima])

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-12
Identity = 36/43 (83.72%), Postives = 36/43 (83.72%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTF 76
            GS  YIKRERGYSIDPLHIDDPLFPMNNVGRNCF  HQ I  F
Sbjct: 1469 GSGVYIKRERGYSIDPLHIDDPLFPMNNVGRNCFRIHQCIKAF 1511

[Close]
BLAST of CmaCh14G021600 vs. TAIR 10
Match: AT4G00060.1 (Nucleotidyltransferase family protein )

HSP 1 Score: 74.7 bits (182), Expect = 4.2e-14
Identity = 32/43 (74.42%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 33   GSRAYIKRERGYSIDPLHIDDPLFPMNNVGRNCFCFHQYINTF 76
            GS  Y  RERGYSIDP+HIDDPLFP NNVGRNCF  HQ I  F
Sbjct: 1399 GSGIYRNRERGYSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAF 1441

The following BLAST results are available for this feature:
BLAST of CmaCh14G021600 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G021600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E9B41.6e-1390.00uncharacterized protein LOC111431966 isoform X5 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1IWC27.9e-1383.72uncharacterized protein LOC111479179 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1EM407.9e-1383.72uncharacterized protein LOC111435527 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1IWQ87.9e-1383.72uncharacterized protein LOC111479179 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IFP57.9e-1383.72uncharacterized protein LOC111472892 OS=Cucurbita maxima OX=3661 GN=LOC111472892... [more]
BLAST of CmaCh14G021600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924484.13.3e-1390.00uncharacterized protein LOC111431966 isoform X5 [Cucurbita moschata][more]
XP_030535309.11.3e-1263.16uncharacterized protein LOC115744335 isoform X2 [Rhodamnia argentea][more]
XP_030535306.11.3e-1263.16uncharacterized protein LOC115744335 isoform X1 [Rhodamnia argentea] >XP_0305353... [more]
XP_023527225.11.6e-1283.72uncharacterized protein LOC111790524 isoform X12 [Cucurbita pepo subsp. pepo][more]
XP_022979477.11.6e-1283.72uncharacterized protein LOC111479179 isoform X1 [Cucurbita maxima] >XP_022979478... [more]
BLAST of CmaCh14G021600 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G00060.14.2e-1474.42Nucleotidyltransferase family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G021600.1CmaCh14G021600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016779 nucleotidyltransferase activity