CmaCh14G020750 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G020750
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr14: 14396902 .. 14399167 (-)
RNA-Seq ExpressionCmaCh14G020750
SyntenyCmaCh14G020750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAACCCGCGCGATTTCAGGCATTTTCGTTTTCACTTTCAGTACTTTCCCTCCAGGCCTGGCTCTCTCTTCGCCCGATTCTCTCTCGATTTCTTTGATCGTTCGTTCCTTTCGGCAGAGGATCGACTTTCGTTTTCGCTGAAGACCGAGCCACCGATGATCGATTGTTCAAGATATGGTTCCCTTCCTTTGATGGCCAAAAGAACAACAAAAGCGGATATGATTGATTCTTGTGAGTTATAGATCACTTCCCTTTCTTTTCCCTTATTCATTCTCTCTGCTGCGGCTTCATGAATGCGGCAATCTGTGTTTTTCAATGATGGACGGTGTTTTTTGGCCACTGCAAATCGCTGGAATCACGCTGCGTTCTTCTAGTCATCGACAATGCTAATTTTCTTTCTTCAATGGCGGATGGTGTTTTTGTTATTTTCTTGCTAATTATCTCCCTTGACATCGACAATGCTGTTTTGTTCTTAGATTTAAACGATCTGTGTTCGCTGTACTATCAAGCGTGTTTGATGCCCTCGAGATTGCTAGGAAGCGGGACATGCTCATCGTTTGTGTCCATTTCTTTCTCTTTTCTTTTTTAACATTTTTTTTTTCCTTTGAAGTAAACTCGCTGTGAAAATACCTAAGAGGTTTCAAAAATATCAAGAACGAAAGTAGCTTCTAGTTATAGATAGATGAAGTTTTTCTAATTGCAAGAGATTATTCCCGTTCTTCTCAAATGCTTGTCAAATTACTCTGATGTGAAAATGGAACTCGAGAGCCCTGTTTGGTAGTTGAGAAAATATTTGATATAATGAAATGTGATGTGATAAGATATTTAAGTTGAAAAAAGAAAGAACCTAAAATTTCAACAATCTTACGCAGGAAATCGAACTAAATGAGGGGGGAATTAGAAAATATTGTTATTTGTGATCTCTTTTATGTTTTTACCTGATTGTTGTGCACCTTGACGCTGCTTAGTACCAAGTCCGTGCGCAATTTGAATTTGATATTGATGTTATTTCGTAGCTCAATAGCTTATCACTTTCGTGCAGTTCTTAGTCATTAGAAGCGCTTGTTGCAAGATACTATGTTATTGTTTGTTTTGCTATACATAAACATATAGAATGCAACTCCATTTCTAAAGCTATTGAAAATAAAATGTGCACCATTTGATATTGATAGAAAATCCACGATCCCATGTTTAAACAACTCAAATTCTTTGCCTTATCCAATTGTTTGCCTAATCCGATTCATTTCGAGACCTGTTATCTCTGGTTTTCAATTTTCAGTTCCCATTTCTTGTGAAAATGAGTGAAATTCTTCGCATCCAACGAGGCCAATGTGGGGAACCAGATCGGTGGCAAGTTCTGGTGAGTTGTTTGTGCTGACTATGTTATCGACCCCATCGATTAATGCATACTACAATGAGGTCAGTTGCTGGAGACAGAATTCATAAATTTATTGAATGAACTCTTTCAATACCTGAGTTCTACTGATTGCAATTCACTCGGGTTGTTTAATCCTTAGAAGAGTTTAGTTTTCCTTCTCACATTTTCAGTATTTCCCTCCGCTTTCTTTTACCGTTCCTTTTCTCTCTGAATGCCCAAAATGACAATAATCCATTCCCTTTCTTCGAACAGATAATTTTATTACTTCCACTCCCCCCCTCCCCCCCTCCCCCCATTTTTTTTCCTTTCATCCGTTCGTCTAACGGGGCTTCTTCAACATTGTTCCGCATTCTTCATTTTCCGGCGGCATCTTGAACGCTTCTTACGGCGCCCGAGGCTTGAACGGTTAACGTTGTTTTTGGATTTTTGCCTTTCTTTCTTTCAGTAGTTATGGAATCTGATAATCTCATATCATTATTTCACTTTTCTAGAAACAAGAAAGTAGAATATGGCCTTTCCAGCCATTGGATTTTACGGTAACCCCTTCTTTCCAGCCACGGCTCTCCGGTGAACGGTACGCACTTTTTTTTCCCTCTCTAGAAATATTATTGACATACTGATATTTTGAAGAACTTTAAGGTATTATTCTGTAACAAAATAAATACTAGTTATATTATGCATATTTAACTAGAAAATAGTGTAATTTATATCATGATTAAAGGATTTAGGGTTAGAAGCGAAGTTACCATTTTTATAAAGAAAATATCCTAATTATAATAGGATTAGGGTTTGAGAAATAAAGTTTGTATTTATGTTAGTATTAGGAAATAAGATATAGGATTAATAAATATACTTTTTATTTTGTTAGTGTAAAGATTGTCTAA

mRNA sequence

ATGTCAAACCCGCGCGATTTCAGGCATTTTCGTTTTCACTTTCAGTACTTTCCCTCCAGGCCTGGCTCTCTCTTCGCCCGATTCTCTCTCGATTTCTTTGATCGTTCGTTCCTTTCGGCAGAGGATCGACTTTCGTTTTCGCTGAAGACCGAGCCACCGATGATCGATTGTTCAAGATATGGTTCCCTTCCTTTGATGGCCAAAAGAACAACAAAAGCGGATATGATTGATTCTTGTGAATTTAAACGATCTGTGTTCGCTGTACTATCAAGCGTGTTTGATGCCCTCGAGATTGCTAGGAAGCGGGACATGCTCATCTTCCCATTTCTTGTGAAAATGAGTGAAATTCTTCGCATCCAACGAGGCCAATGTGGGGAACCAGATCGGTGGCAAGTTCTGAAACAAGAAAGTAGAATATGGCCTTTCCAGCCATTGGATTTTACGGTAACCCCTTCTTTCCAGCCACGGCTCTCCGGTGAACGTGTAAAGATTGTCTAA

Coding sequence (CDS)

ATGTCAAACCCGCGCGATTTCAGGCATTTTCGTTTTCACTTTCAGTACTTTCCCTCCAGGCCTGGCTCTCTCTTCGCCCGATTCTCTCTCGATTTCTTTGATCGTTCGTTCCTTTCGGCAGAGGATCGACTTTCGTTTTCGCTGAAGACCGAGCCACCGATGATCGATTGTTCAAGATATGGTTCCCTTCCTTTGATGGCCAAAAGAACAACAAAAGCGGATATGATTGATTCTTGTGAATTTAAACGATCTGTGTTCGCTGTACTATCAAGCGTGTTTGATGCCCTCGAGATTGCTAGGAAGCGGGACATGCTCATCTTCCCATTTCTTGTGAAAATGAGTGAAATTCTTCGCATCCAACGAGGCCAATGTGGGGAACCAGATCGGTGGCAAGTTCTGAAACAAGAAAGTAGAATATGGCCTTTCCAGCCATTGGATTTTACGGTAACCCCTTCTTTCCAGCCACGGCTCTCCGGTGAACGTGTAAAGATTGTCTAA

Protein sequence

MSNPRDFRHFRFHFQYFPSRPGSLFARFSLDFFDRSFLSAEDRLSFSLKTEPPMIDCSRYGSLPLMAKRTTKADMIDSCEFKRSVFAVLSSVFDALEIARKRDMLIFPFLVKMSEILRIQRGQCGEPDRWQVLKQESRIWPFQPLDFTVTPSFQPRLSGERVKIV
Homology
[Close]
BLAST of CmaCh14G020750 vs. NCBI nr
Match: KAG6582640.1 (hypothetical protein SDJN03_22642, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-14
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 81  FKRSVFAVLSSVFDALEIARKRDMLI--FPFLVKMSEILRIQRGQCGEPDR 130
           F+RS+FAVLSSVFDALEIARKRDMLI  FPFLVKMSEILRIQRGQCGEPDR
Sbjct: 360 FQRSMFAVLSSVFDALEIARKRDMLIVWFPFLVKMSEILRIQRGQCGEPDR 410

[Close]
BLAST of CmaCh14G020750 vs. NCBI nr
Match: KAG7019036.1 (hypothetical protein SDJN02_20913, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 74.7 bits (182), Expect = 8.3e-10
Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 94  DALEIARKRDMLI--FPFLVKMSEILRIQRGQCGEPDRWQVL 134
           DALEIARKRDMLI  FPFLVKMSEILRIQRGQCGEPDR QVL
Sbjct: 352 DALEIARKRDMLIVWFPFLVKMSEILRIQRGQCGEPDRCQVL 393

The following BLAST results are available for this feature:
BLAST of CmaCh14G020750 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G020750 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G020750 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6582640.11.5e-1492.16hypothetical protein SDJN03_22642, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7019036.18.3e-1092.86hypothetical protein SDJN02_20913, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh14G020750 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G020750.1CmaCh14G020750.1mRNA