CmaCh14G010400 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G010400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	MAGUK p55 subfamily member 4 like
Location	Cma_Chr14: 5478849 .. 5480100 (+)
RNA-Seq Expression	CmaCh14G010400
Synteny	CmaCh14G010400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAGTGCAGTGGGTGGTGGTCGGCCGGCGAGTCTGGCTGAGCTAGGTTGTCGATTCAGCGGCGGCGGATGCGGCGGCGGTGGGTGGTTGTTCAGGAAGAGGAAGAAGAAGATTGAAATTAAAGGGTGTGTTGTTATGGGTTTTTGGCGTCAGATTATTTTTCCCGTACGGCGTGTTTGGCTCGCCGTCTATGGCCGTCTTAAAGCTCGCAAAAATGGTCTGTTTTTTTGTTCCCTTTTTGCCCTCCTCTTCGTCCGTACACTTTTTTTTTTATCGCATAATTTTTAATTTTAGAATCGGATTTTTTTTTATTATAGTAATAATTAATGAAATTTATTCCATAATTATATATATATGGGGAAAAACAAGAACAAAATTCCAAATTTGATAAATTTTATTTTTCTTATTTATTATTATTATTTATACCAAATAAATTATGGTAATTAAAGTTAAAAAAAAATGAGGGTTTTAATTAATTAATTAACTTTATAAAGGTGGATTGGATAAACATTGAGATAAAGCAATTTTTTATGCTTCCATGTCACATAGCATTATTAATGGCTTGAAAAAAAGAGGAAATTATGTGTCTTTTTCCTTTTTTTTTCCAAATAAAGATGCTTCCATCAAGGAATCAGATTCATATGGCTAACTCTTTTGTACCACTTCCTATTGTTGCACATCAAAATTACACTAGAAATAGATTATTGAATTTTTAAAGTCGTGGTTCTACAGATGAAGGACTTTTAAAACTTCATGACGACGTAGAAACGTGTGGCTATCAAGATGTAAAGGTTATGTGGGAAATACTTAAGCAATCAGAAGCTGAGTTGATCAATCATCACCACCAACCGAAGCGTAAACACAAGCGATTCTGGAAGGATTTTTTGTGGTCTAATCCTAACTCTGACTCAACTACTAGTACAACTGAAATGATGCCTTTTCCGACTTTTAGCCCCATTTCGTAGGGTGATAAGTCTAAGGCTCGTGTAAATAGAAATAATAATTGTTAAAAGGTGTATTGTTAAAAGGTTCTTTTTTCTTCCTTGAGTTGGAGTTTTCAATATTTGCTTCAAATTTAGGACCATCATCTTACATGGGCTATTTGTTGTAAGATAGTGAAATATTGGAGTTAGAGATAACCACAATCGTTTAACGTGGTTCTAACGAGTTGTTTCTGTTATGATATATTATAAGATAAGAATGAGGTATGAACTATATATATAACATGAAAATGAGATGATGTTTGTCAAAG

mRNA sequence

AACAGTGCAGTGGGTGGTGGTCGGCCGGCGAGTCTGGCTGAGCTAGGTTGTCGATTCAGCGGCGGCGGATGCGGCGGCGGTGGGTGGTTGTTCAGGAAGAGGAAGAAGAAGATTGAAATTAAAGGGTGTGTTGTTATGGGTTTTTGGCGTCAGATTATTTTTCCCGTACGGCGTGTTTGGCTCGCCGTCTATGGCCGTCTTAAAGCTCGCAAAAATGATGAAGGACTTTTAAAACTTCATGACGACGTAGAAACGTGTGGCTATCAAGATGTAAAGGTTATGTGGGAAATACTTAAGCAATCAGAAGCTGAGTTGATCAATCATCACCACCAACCGAAGCGTAAACACAAGCGATTCTGGAAGGATTTTTTGTGGTCTAATCCTAACTCTGACTCAACTACTAGTACAACTGAAATGATGCCTTTTCCGACTTTTAGCCCCATTTCGTAGGGTGATAAGTCTAAGGCTCGTGTAAATAGAAATAATAATTGTTAAAAGGTGTATTGTTAAAAGGTTCTTTTTTCTTCCTTGAGTTGGAGTTTTCAATATTTGCTTCAAATTTAGGACCATCATCTTACATGGGCTATTTGTTGTAAGATAGTGAAATATTGGAGTTAGAGATAACCACAATCGTTTAACGTGGTTCTAACGAGTTGTTTCTGTTATGATATATTATAAGATAAGAATGAGGTATGAACTATATATATAACATGAAAATGAGATGATGTTTGTCAAAG

Coding sequence (CDS)

AACAGTGCAGTGGGTGGTGGTCGGCCGGCGAGTCTGGCTGAGCTAGGTTGTCGATTCAGCGGCGGCGGATGCGGCGGCGGTGGGTGGTTGTTCAGGAAGAGGAAGAAGAAGATTGAAATTAAAGGGTGTGTTGTTATGGGTTTTTGGCGTCAGATTATTTTTCCCGTACGGCGTGTTTGGCTCGCCGTCTATGGCCGTCTTAAAGCTCGCAAAAATGATGAAGGACTTTTAAAACTTCATGACGACGTAGAAACGTGTGGCTATCAAGATGTAAAGGTTATGTGGGAAATACTTAAGCAATCAGAAGCTGAGTTGATCAATCATCACCACCAACCGAAGCGTAAACACAAGCGATTCTGGAAGGATTTTTTGTGGTCTAATCCTAACTCTGACTCAACTACTAGTACAACTGAAATGATGCCTTTTCCGACTTTTAGCCCCATTTCGTAG

Protein sequence

NSAVGGGRPASLAELGCRFSGGGCGGGGWLFRKRKKKIEIKGCVVMGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAELINHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS

Homology

[Close]

BLAST of CmaCh14G010400 vs. ExPASy TrEMBL
Match: A0A6J1J0R9 (uncharacterized protein LOC111482415 OS=Cucurbita maxima OX=3661 GN=LOC111482415 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.8e-55
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 46  MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 105
           MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL
Sbjct: 1   MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 60

Query: 106 INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 150
           INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS
Sbjct: 61  INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 104

[Close]

BLAST of CmaCh14G010400 vs. ExPASy TrEMBL
Match: A0A6J1F2W0 (uncharacterized protein LOC111441680 OS=Cucurbita moschata OX=3662 GN=LOC111441680 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.0e-49
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 46  MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 105
           MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL
Sbjct: 1   MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 60

Query: 106 INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 150
           INHHHQ +RKHK FWKDFLWS PNSDSTTSTT+M+PFPTF+ IS
Sbjct: 61  INHHHQTRRKHKPFWKDFLWSIPNSDSTTSTTKMIPFPTFNSIS 104

[Close]

BLAST of CmaCh14G010400 vs. ExPASy TrEMBL
Match: A0A0A0LD54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710210 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40
Identity = 83/104 (79.81%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 46  MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 105
           MGFW Q+IFPVRRVWLAVYGRLKAR+NDEGLLKLHDDVETCGYQDVKVMWEIL++SEAEL
Sbjct: 1   MGFWHQMIFPVRRVWLAVYGRLKARRNDEGLLKLHDDVETCGYQDVKVMWEILRRSEAEL 60

Query: 106 INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 150
           IN HHQ +RKHK FWK  +WSN NS+S+T+  +M  FPTFSPIS
Sbjct: 61  IN-HHQMRRKHKPFWKALVWSNHNSNSSTNIPKMTNFPTFSPIS 103

[Close]

BLAST of CmaCh14G010400 vs. ExPASy TrEMBL
Match: A0A7J9F1R8 (Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_003516 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 9.5e-27
Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = 0


Query: 7   GRPASLAELGCRFSGGGCGGGGWLFRKRKKKIEIKGCVVMGFWRQIIFPVRRVWLAVYGR 66
           G  A    +  R  GGG GGG    +  K+KI +K    M FW ++IFPVRR W  V   
Sbjct: 1   GGLAGFKTIAFRVLGGGGGGGKRKIKNSKRKIRVKE-KFMDFWHKMIFPVRRFWFTVSSP 60

Query: 67  LKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAELINHHHQPKRKHKRFWKDFLWS 126
           LKARKN  GLLKL DD++TCGYQDV+VMWE+L++SE E  +HH  PKRK + FW+ F+WS
Sbjct: 61  LKARKNGAGLLKLRDDIQTCGYQDVQVMWEMLRRSETE--HHHPHPKRKQRPFWRVFVWS 120

Query: 127 NPNSDSTTST 137
           + N+ S++++
Sbjct: 121 SSNNTSSSTS 127

[Close]

BLAST of CmaCh14G010400 vs. ExPASy TrEMBL
Match: A0A7J8SQ51 (Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_022735 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 9.5e-27
Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = 0


Query: 7   GRPASLAELGCRFSGGGCGGGGWLFRKRKKKIEIKGCVVMGFWRQIIFPVRRVWLAVYGR 66
           G  A    +  R  GGG GGG    +  K+KI +K    M FW ++IFPVRR W  V   
Sbjct: 1   GGLAGFKTIAFRVLGGGGGGGKRKIKNSKRKIRVKE-KFMDFWHKMIFPVRRFWFTVSSP 60

Query: 67  LKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAELINHHHQPKRKHKRFWKDFLWS 126
           LKARKN  GLLKL DD++TCGYQDV+VMWE+L++SE E  +HH  PKRK + FW+ F+WS
Sbjct: 61  LKARKNGAGLLKLRDDIQTCGYQDVQVMWEMLRRSETE--HHHPHPKRKQRPFWRVFVWS 120

Query: 127 NPNSDSTTST 137
           + N+ S++++
Sbjct: 121 SSNNTSSSTS 127

[Close]

BLAST of CmaCh14G010400 vs. NCBI nr
Match: XP_022983947.1 (uncharacterized protein LOC111482415 [Cucurbita maxima])

HSP 1 Score: 223.8 bits (569), Expect = 1.0e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 46  MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 105
           MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL
Sbjct: 1   MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 60

Query: 106 INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 150
           INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS
Sbjct: 61  INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 104

[Close]

BLAST of CmaCh14G010400 vs. NCBI nr
Match: KAG7018111.1 (hypothetical protein SDJN02_19979 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.1 bits (531), Expect = 2.5e-50
Identity = 97/104 (93.27%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 46  MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 105
           MGFWRQIIFPVRRVWLAVYGRLKARKNDEG+LKLHDDVETCGYQDVKVMWEILKQSEAEL
Sbjct: 1   MGFWRQIIFPVRRVWLAVYGRLKARKNDEGVLKLHDDVETCGYQDVKVMWEILKQSEAEL 60

Query: 106 INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 150
           I+HH Q +RKHK FWKDFLWSNPNSDSTTSTT+MMPFPTFSPIS
Sbjct: 61  IHHHQQTRRKHKPFWKDFLWSNPNSDSTTSTTKMMPFPTFSPIS 104

[Close]

BLAST of CmaCh14G010400 vs. NCBI nr
Match: XP_022934534.1 (uncharacterized protein LOC111441680 [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-49
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 46  MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 105
           MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL
Sbjct: 1   MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 60

Query: 106 INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 150
           INHHHQ +RKHK FWKDFLWS PNSDSTTSTT+M+PFPTF+ IS
Sbjct: 61  INHHHQTRRKHKPFWKDFLWSIPNSDSTTSTTKMIPFPTFNSIS 104

[Close]

BLAST of CmaCh14G010400 vs. NCBI nr
Match: KAG6581613.1 (hypothetical protein SDJN03_21615, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-40
Identity = 85/94 (90.43%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 1   NSAVGGGRPASLAELGCRFSGGGCGGGGWLFRKRKKKIEIKGCVVMGFWRQIIFPVRRVW 60
           +SAVGGGRPASLAELGCRFS    GGGGWLFRKRKK IEIKGCVVMGFWRQIIFPVRRVW
Sbjct: 33  SSAVGGGRPASLAELGCRFS----GGGGWLFRKRKKNIEIKGCVVMGFWRQIIFPVRRVW 92

Query: 61  LAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVM 95
           LAVYGRLKARKNDEG+LKLHDDVETCGYQDVK +
Sbjct: 93  LAVYGRLKARKNDEGVLKLHDDVETCGYQDVKAV 122

[Close]

BLAST of CmaCh14G010400 vs. NCBI nr
Match: XP_004137647.1 (uncharacterized protein LOC101215661 [Cucumis sativus] >KGN58642.1 hypothetical protein Csa_002613 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-40
Identity = 83/104 (79.81%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 46  MGFWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEILKQSEAEL 105
           MGFW Q+IFPVRRVWLAVYGRLKAR+NDEGLLKLHDDVETCGYQDVKVMWEIL++SEAEL
Sbjct: 1   MGFWHQMIFPVRRVWLAVYGRLKARRNDEGLLKLHDDVETCGYQDVKVMWEILRRSEAEL 60

Query: 106 INHHHQPKRKHKRFWKDFLWSNPNSDSTTSTTEMMPFPTFSPIS 150
           IN HHQ +RKHK FWK  +WSN NS+S+T+  +M  FPTFSPIS
Sbjct: 61  IN-HHQMRRKHKPFWKALVWSNHNSNSSTNIPKMTNFPTFSPIS 103

[Close]

BLAST of CmaCh14G010400 vs. TAIR 10
Match: AT5G43150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06
Identity = 24/74 (32.43%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 48  FWRQIIFPVRRVWLAVYGRLKARKNDEGLLKLHDDVETCGYQDVKVMWEIL-KQSEAELI 107
           +W  + FP RR+W     R+  R +  GLL+L  DV +C Y+D+ +MW +L K  +   +
Sbjct: 9   WWNTMAFPTRRIWNRFTVRVGFRHS--GLLRLEHDVSSCEYEDIHIMWNLLHKNEDLTRV 68

Query: 108 NHHHQPKRKHKRFW 121
               Q +++ K  W
Sbjct: 69  PIQQQQQQRKKPCW 80

The following BLAST results are available for this feature:

BLAST of CmaCh14G010400 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G010400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J0R9	4.8e-55	100.00	uncharacterized protein LOC111482415 OS=Cucurbita maxima OX=3661 GN=LOC111482415...	[more]
A0A6J1F2W0	1.0e-49	92.31	uncharacterized protein LOC111441680 OS=Cucurbita moschata OX=3662 GN=LOC1114416...	[more]
A0A0A0LD54	1.5e-40	79.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710210 PE=4 SV=1	[more]
A0A7J9F1R8	9.5e-27	50.00	Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_00351...	[more]
A0A7J8SQ51	9.5e-27	50.00	Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_022...	[more]

BLAST of CmaCh14G010400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983947.1	1.0e-54	100.00	uncharacterized protein LOC111482415 [Cucurbita maxima]	[more]
KAG7018111.1	2.5e-50	93.27	hypothetical protein SDJN02_19979 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022934534.1	2.1e-49	92.31	uncharacterized protein LOC111441680 [Cucurbita moschata]	[more]
KAG6581613.1	1.4e-40	90.43	hypothetical protein SDJN03_21615, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004137647.1	3.1e-40	79.81	uncharacterized protein LOC101215661 [Cucumis sativus] >KGN58642.1 hypothetical ...	[more]

BLAST of CmaCh14G010400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43150.1	1.4e-06	32.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 48..134
None	No IPR available	PANTHER	PTHR33181:SF19	OSJNBA0041A02.21-LIKE PROTEIN	coord: 48..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G010400.1	CmaCh14G010400.1	mRNA