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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGGCTTCCATGAGACTCCCTCATTATTATGCTACTGCTACTGTTTTGGCCCTTGCAATAGTGTGCTTCGAGATGAAGAAGGTCCATGGCATCGAGACTGAGATATCTCCAATGCCTGCCATGGCTGCTGGCTCTGCATTTCCTTCTTCTACTGTTGCCTATGCTTTCAATTCTGTACTACCTCTGCTCTGTACTTTTGGTTTTCAAGGCTTCTTCTTGTCCTAAAACAATGGGTTTGTAGGCTGTTTTGTGTTTGTTCTATCTGTATAGAATACCAGCGGGCTTTCTTCTCACCAAATAAGGCCATGCATTCATCCCATCTATATCATGATACTCATAACCCATGCAAACACATGCTATTATGCAGGTACAAAGGCATGCTGATATACAAACTAGGCAAATTTATTCATTTTCTTTCATGTAACACTATTTTTCTTTTTCTTTTTTCACATCAGTATTAA mRNA sequence ATGGCGGCTTCCATGAGACTCCCTCATTATTATGCTACTGCTACTGTTTTGGCCCTTGCAATAGTGTGCTTCGAGATGAAGAAGGTCCATGGCATCGAGACTGAGATATCTCCAATGCCTGCCATGGCTGCTGGCTCTGCATTTCCTTCTTCTACTGTTGCCTATGCTTTCAATTCTTATTAA Coding sequence (CDS) ATGGCGGCTTCCATGAGACTCCCTCATTATTATGCTACTGCTACTGTTTTGGCCCTTGCAATAGTGTGCTTCGAGATGAAGAAGGTCCATGGCATCGAGACTGAGATATCTCCAATGCCTGCCATGGCTGCTGGCTCTGCATTTCCTTCTTCTACTGTTGCCTATGCTTTCAATTCTTATTAA Protein sequence MAASMRLPHYYATATVLALAIVCFEMKKVHGIETEISPMPAMAAGSAFPSSTVAYAFNSY
Homology
BLAST of CmaCh14G010120 vs. ExPASy TrEMBL
Match: A0A0A0LCE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697920 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 8.0e-09 Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = 0
Query: 1 MAASMRLPHYYATATVLALAIVCFEMKKVHGIETEISPMPAMAAGSAFPSSTVAYAFN 59
MA+SMR PH+ A VL LA+V EMKKV IE E++PMPAMAAG AFPSS VA FN
Sbjct: 1 MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSS-VALGFN 57
BLAST of CmaCh14G010120 vs. NCBI nr
Match: KAG6581583.1 (hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 98.2 bits (243), Expect = 2.5e-17 Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = 0
Query: 1 MAASMRLPHYYATATVLALAIVCFEMKKVHGIETEISPMPAMAAGSAFPSSTVAYAFNS 60
MA SMRLPHYYATA VLALA+VCFEMKKVHGIE EISPMPAMAAGSA P STVAYAFN+
Sbjct: 1 MAPSMRLPHYYATAAVLALAMVCFEMKKVHGIEAEISPMPAMAAGSASP-STVAYAFNA 58
BLAST of CmaCh14G010120 vs. NCBI nr
Match: KGN58599.1 (hypothetical protein Csa_001638 [Cucumis sativus]) HSP 1 Score: 68.9 bits (167), Expect = 1.7e-08 Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = 0
Query: 1 MAASMRLPHYYATATVLALAIVCFEMKKVHGIETEISPMPAMAAGSAFPSSTVAYAFN 59
MA+SMR PH+ A VL LA+V EMKKV IE E++PMPAMAAG AFPSS VA FN
Sbjct: 1 MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSS-VALGFN 57
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LCE5 | 8.0e-09 | 65.52 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697920 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAG6581583.1 | 2.5e-17 | 88.14 | hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KGN58599.1 | 1.7e-08 | 65.52 | hypothetical protein Csa_001638 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016020 |
membrane |
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