CmaCh14G008610 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTATCGCACTAATTCTATTCCCATTTTCGTAAGCATCCTTGTTTCCTCTTTTTCTCTTGCATTTAATCTTAGTTCCTATGCTGTTCATAAGTTTTTGTCTGCAATGTGTTTGTTCATTTGCTAATCATGTTGGTAGCTGTTTGAAGGTTGCTGCCATTCTCTCTTTTTGTGCATTTTCGTTAATTTCAGGTTTTTCTCGATCTGGATTGCTGTTTTCTTGAATTTCTTCGGGTTTGGTTTCTGAGTTTTCTCTTTGTTTGGTTTATACTATTTAATCATATTGATTTAGTCTTGCTTGGTTTTTGATGTTTTGAGTTGTCATTTTCTCTTACATTCCTACATTTTTGCAAGATTTTTGTAACATCTTTCGTTCGATTGCTGCCAAAACTCGGTTAGTTTAACTATGAATAATGAGTTCAAACGTCTGAATCTGTTCAGAGGTCTTAGAACTAAGTTCTGGGGCAAAATCCTTGCAGTTTGTTCATAGTCCATAGGGCTCTTCCTACTAATTCTTGAGGAGGCTTTGCCTGTTAGAAGACCAATCTCCAGGGATGATAAGTATTTCAGAGTATTAAGTTTTCAAAATCAAGGTTTGAACCTTTAACTAAATCGAGTTGACTAAATTGTGCTTGGAGCATTGATGTAACTTTTTGAGTATCAGTGAAATGTCTCTTTTTTTCCTCCTAAAGAAAGACAAAAAGGATAACTGTAAGGAGCGTTTGGTTTTTCATGGCTCGTTTAACATTCAAATTTTTGTTCCCTTTCTCTTTTCTCCTGCAACTTATGATTATTTATTTATAGAATAATTATTATTACATTTGTCTAATCATCAGGTGAATTCAATGATTCTTTCCTCTTCTTTTTATTTTTATTTTTAATTTTTAAAGAACTGGGGAATCAGGATTTCATTCCTTGCATACTCATGGCCCACTTCATAGATCTTCGAGAAGCTTTGCCCACTCCGAAGCCAACTTTAGAAAACAACAAGAATTTCAAATTAGTAATTTTTTTACCTAGGAATCGGAATTGAACTCATGAGAAGAGGATATTTGTAAGAGCCTAAGCCTACCACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGTTTCCCCTCTAGATTTTTAAAACGCGTTTACTAGGGAGAGGTTTTCACACCCTTATAAGGAATGCTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACAATCCACCCCCCTTTGGGGCCCAGCGTCCTTGTTAACACCCGTTCCCTTCTCCAATCGATTTAATGTGGGACCCCTCAATCCACCCCCCTTCAAGGTCCAGCGTCCTTGTTGGCATACCGCTTTCTGTCCACCCCTCTTCGGGGCTCAGCCTCCTCGCTAGTATATCACCCGGTGTATGGCTCTGATACCATTTGTAACAGCCCAAACCCACCGCTAGCAGATATTGTCCTATTTGGACTTTCCCTTTCGGGCTTCCCTTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGATTGCTTCGTTTTTCTCCCCAACCGACATGGAATCTCACAATATCTTATGATATCCCAATTCTAAGGACCTTACTAGTCACACCATCGCCCCATGGGTTGTAAACTCCAAAAGTTTCAAAATTTCTATTCTTTCTTTATTTTCTGCTAGATCTTTGAATTATACTATGTTGAGAAACAATCTGAATTGTCATGGATGTTGTTCACTGCAGCAAACAAAATTGATCTACATAGTTGTAAATGTTGTTTGGCTTATTTTATATGATTTTTTTGACATTCATTCATTCCAATGTTTACTGGGTCATTGAAGAATGGGGGAACATTTTGTGCTGTTGGTGGATCAGTTGCTCACAGAATCAAACCTTGAAGCTACTATTGAGAGAAAAAACCGAAATTGTCGTCCTATGGCCTCAACAAGTGCAGATAACATGATATCTTCCTTAAATATTGATGTTGAATTCATGCCATCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGATGAATCAAAAATGGAGGCACCATGCTCTTGCTGTGGAAGCTTGAAGGTTAGATTTGGTATACTCAACACCAATTAGTGCTACTTAATCAATAAAACTCAGATAGCTTTTCTTTGAATCCCTCGTTTCCAAATTATGACTGACTAAACTGGTTTCAACAATGTTCCTGTTGATATTTTCTGCACGTTTCCAAATTATATGACTGACTAAACTGGTTTCAACAATGTTCTTATCGATATTTTCTGCATTTAGTTTCAGTCCAACTTTATATTTTCCCCCAAATCTTTGCCCCGGATGTTATAATATGCTATAAACACTTGCTAAGGCAGGTCCCTTGGTTTATATTTACTTGTTGCTAGACTGAAAATGTTAGAATCAGATTCATATCTTTATTCCTCACTGTGTTCGTTTAGATGGTTCACCTTGATAATTAGCTTCCAGTTAGTGTTGATAATTACAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGTCTGTTGTTTTTGTTCAAATAAATGAAAAATTCTTTAATACATAACTAACTTTATGGTCGTAAGAAGTCGTTTTTCTTGTACTGCAGGATTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGTTAACCATTTACCTCTCTCCCCTCAATGCAAGTTTCTCTAGTTTGCATTGTATATTCACTTATTGTTCGTTTATTTTTTAGACACTATTGATATAATATCACTGTCGTCGAATTGTGTTCTTAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCTGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTGTATTCCCTACCTCTTCATTTTACTTCATTTCCAGTTTCCTTATCTCTGTAAACAAATTTAAATGGATTGATAATTGGCTTTGCCTTCTGCACATAAAAGAAGTATTAAATGTTCTTGCTCGTTGATTCTTTTTCATTCACTTGTGAAGGGAGCAAAGCAAACATAGTTTTTGGTTTAAGTTCGAACATTCGTTCTTATTTTAGTCTTTGAACTTTCTATTAAGACTTTGAACATTCGTTCTTCTGCATGAACAAGTGTTTGATTCACTATTAGTAAGTTAAAGTATTGGGTCTTCAAGCATCAACGAAAAGAATTTAAGTAGTCATGTAATCTAAGTTTCGGAGACGAAATAGAGTATTAGAAGTCGATGGATTAAAATATAACGTTTTGAAGCTTAAGAATGAAAATGAAACAAGCATCAAAGTTCATATCTATAATACGATTTAAACCTGTATTCGCCTTGATTATATTTGACCAACAATCCCGAGTTTGAAACTTCTAATCGTATCTGTATGTTGCAGTTTATCGTTCTTCTCGTTTTGCGCCATACACTTCCAATTGTAATCAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGGTAGGCTTGTTTTCTCTGTTTCCCCTTCTACTTCTCCTTCCTTTGGCCCTCTTCCATTGTTGAGACCAATGAAGAACCATAAGTTCATGTGCTGTATGTTTCAGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGTTAGTGATGCTGTTTATGCCTGGATTATTCGTTTCATCGTAAGAACTGCTTGGATTTGTGAAGAGGTCGATGCAGAATAGACATGAATTTTGTTGGGCTATTCTGTTATACGGTGCCTCATATGTAGTTAAAGTGCATTTAAGGACATTGTTGATCAACTTGAACGTAACTCAACTAATTAAAGCATATATTACCAACCATGATGAACATACAAGAGAGAGTGCACATTCCTGAAAATTTGCTCTGGTTATCTATTATCGTTGAGCTTGATGTCTAGCAGTTGTTTACATTCCCTTGATACGACGTTTGAGTATACTAGTATGCTTTTGGTAGGATCCCCGTCTTCGCCTCGCGACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAG CTTCTATCGCACTAATTCTATTCCCATTTTCAATGGGGGAACATTTTGTGCTGTTGGTGGATCAGTTGCTCACAGAATCAAACCTTGAAGCTACTATTGAGAGAAAAAACCGAAATTGTCGTCCTATGGCCTCAACAAGTGCAGATAACATGATATCTTCCTTAAATATTGATGTTGAATTCATGCCATCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGATGAATCAAAAATGGAGGCACCATGCTCTTGCTGTGGAAGCTTGAAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGATTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCTGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTTTTATCGTTCTTCTCGTTTTGCGCCATACACTTCCAATTGTAATCAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGATCCCCGTCTTCGCCTCGCGACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAG ATGGGGGAACATTTTGTGCTGTTGGTGGATCAGTTGCTCACAGAATCAAACCTTGAAGCTACTATTGAGAGAAAAAACCGAAATTGTCGTCCTATGGCCTCAACAAGTGCAGATAACATGATATCTTCCTTAAATATTGATGTTGAATTCATGCCATCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGATGAATCAAAAATGGAGGCACCATGCTCTTGCTGTGGAAGCTTGAAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGATTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCTGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTTTTATCGTTCTTCTCGTTTTGCGCCATACACTTCCAATTGTAATCAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGATCCCCGTCTTCGCCTCGCGACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAG MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMPSSSKLVQCRICHDEDDESKMEAPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR Homology
BLAST of CmaCh14G008610 vs. ExPASy Swiss-Prot
Match: Q5T0T0 (E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 GN=MARCHF8 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08 Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy Swiss-Prot
Match: Q0VD59 (E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN=MARCHF8 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.4e-08 Identity = 24/51 (47.06%), Postives = 31/51 (60.78%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy Swiss-Prot
Match: Q9DBD2 (E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 GN=Marchf8 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.4e-08 Identity = 24/51 (47.06%), Postives = 31/51 (60.78%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy Swiss-Prot
Match: Q5XH39 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 4.4e-08 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy Swiss-Prot
Match: Q28IK8 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.7e-08 Identity = 35/100 (35.00%), Postives = 49/100 (49.00%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy TrEMBL
Match: A0A6J1J9L9 (uncharacterized protein LOC111482515 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482515 PE=4 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 1.3e-148 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy TrEMBL
Match: A0A6J1J9N6 (uncharacterized protein LOC111482515 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482515 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.2e-145 Identity = 258/262 (98.47%), Postives = 258/262 (98.47%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy TrEMBL
Match: A0A6J1FB67 (uncharacterized protein LOC111442434 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442434 PE=4 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 1.3e-143 Identity = 254/262 (96.95%), Postives = 255/262 (97.33%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy TrEMBL
Match: A0A6J1F655 (uncharacterized protein LOC111442434 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442434 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 5.0e-140 Identity = 250/262 (95.42%), Postives = 251/262 (95.80%), Query Frame = 0
BLAST of CmaCh14G008610 vs. ExPASy TrEMBL
Match: A0A0A0LBM8 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G186720 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 2.1e-117 Identity = 215/264 (81.44%), Postives = 232/264 (87.88%), Query Frame = 0
BLAST of CmaCh14G008610 vs. NCBI nr
Match: XP_022984108.1 (uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984109.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984110.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984111.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984112.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984113.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984114.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984115.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984116.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984117.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984118.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984119.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984120.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984122.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984123.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984124.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984125.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984126.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984127.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984129.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima]) HSP 1 Score: 535.4 bits (1378), Expect = 2.7e-148 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of CmaCh14G008610 vs. NCBI nr
Match: XP_023528859.1 (uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528860.1 uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528861.1 uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 528.9 bits (1361), Expect = 2.5e-146 Identity = 259/262 (98.85%), Postives = 259/262 (98.85%), Query Frame = 0
BLAST of CmaCh14G008610 vs. NCBI nr
Match: KAG7017957.1 (E3 ubiquitin-protein ligase MARCH8, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 524.2 bits (1349), Expect = 6.3e-145 Identity = 258/262 (98.47%), Postives = 258/262 (98.47%), Query Frame = 0
BLAST of CmaCh14G008610 vs. NCBI nr
Match: XP_022984128.1 (uncharacterized protein LOC111482515 isoform X2 [Cucurbita maxima]) HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144 Identity = 258/262 (98.47%), Postives = 258/262 (98.47%), Query Frame = 0
BLAST of CmaCh14G008610 vs. NCBI nr
Match: XP_022935629.1 (uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935630.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935631.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935632.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935633.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935634.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935635.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935636.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935637.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935638.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935640.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935641.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935643.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata]) HSP 1 Score: 518.8 bits (1335), Expect = 2.6e-143 Identity = 254/262 (96.95%), Postives = 255/262 (97.33%), Query Frame = 0
BLAST of CmaCh14G008610 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 212.2 bits (539), Expect = 4.9e-55 Identity = 119/270 (44.07%), Postives = 164/270 (60.74%), Query Frame = 0
BLAST of CmaCh14G008610 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 212.2 bits (539), Expect = 4.9e-55 Identity = 119/270 (44.07%), Postives = 164/270 (60.74%), Query Frame = 0
BLAST of CmaCh14G008610 vs. TAIR 10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 206.8 bits (525), Expect = 2.1e-53 Identity = 109/248 (43.95%), Postives = 164/248 (66.13%), Query Frame = 0
BLAST of CmaCh14G008610 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 156.8 bits (395), Expect = 2.4e-38 Identity = 83/184 (45.11%), Postives = 110/184 (59.78%), Query Frame = 0
BLAST of CmaCh14G008610 vs. TAIR 10
Match: AT2G02960.4 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 156.8 bits (395), Expect = 2.4e-38 Identity = 83/184 (45.11%), Postives = 110/184 (59.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|