CmaCh14G006870 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G006870
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
LocationCma_Chr14: 3486089 .. 3488124 (-)
RNA-Seq ExpressionCmaCh14G006870
SyntenyCmaCh14G006870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTTTTTTTTTTTGTCACCTCTCTAATCTCTGTTTCTTCGAGACAACAATGGCGAGCGGAATCCTGAGGAGGGCAATAGCTAGGGTTTCTGCAACTCCACCTTCAAGATTCGTTCGAATTCGAGCACATGCTGCGGCTGCCGAAGCGCAGCAAGTTGAGCAGAAAGCGGCCGCCTCAACGAACCTAAAGACATTCGCAATCTACCGATGGAACCCTGATAGTCCTTCTAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGCGGCCCCATGGTGCTAGATGCGCTTATCAAAATCAAGAACGAGGTCGACCCTACTCTAACCTTCCGCCGTTCGTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTCCGTCCGGAGCTTCCTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAAAGGAAGAGCGAGCCGCCTGTGCCTGGGAAGGAGATACTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCAGAGTCCTACCTCGGACCAGCCGCTTTGCTCCATGCCAATAGGTAATTCGTTCACTTTGGTTCTCTGTTTTGGTTGTTCCATGCCTCTCTTTTTGTTAGAAATTAATAGAAAACAGGGACTGTTTAGAGGAATCAAGAAGCTACATGTGAAGGCTGTAGAATTCCATGATATAGTTAGGTTACGTCTTCTTAGTGCTTAGAAAGTGATCTCCTTCTCCTGCTTGGGAATTTGTCCCTTGCATGCATGGTAGAACTTGTATGATTTGATTGATTGCTTATTTTTATAGAGAATCGAGTAACTTAATTCGGTATTTATTATCTATGATTAACAAAGTTTTGATATGCCTTGGTAGACTTGATCTGAAACTCATTTGTTTGCTCTAGTTTCTTGGTGAGTTTCAACCTTAGTCCTTACTGATGTTGCATAAAAGAGTTTTTTATTCACAAAAATTTCGCCAAGAATATTAGTCTTCATTGGTGACGGCTGGAACCCAAATTGGACATATGCTTCCTGCAACTGTCAAGAGCTTAGCCTTTTATAAATGAAGTTAGGATAACTTTATTCAACATTTTACTGGCACCCTACATGATGGAGAAAGATGTACTTTGAATGGAACCAATAACTATGGTTACCAATGTAAATGAAAAAGGCGAAAGGGTAATGAGTTCAAGTCATGATAATCACTTACATAGGATTCGTATACCATAAGTTTATTTGATAACGGAACATAGTAAGGAAGGTGTAGCATTTGTCTCATGTGAAAGAGTTTGGTACAAGTTTACCCAAACTAACTTAAAAAATGAAATTAGAAGATCAAAAACTTGGAAGCAATGAACAGTGATGAAGTTTTACATCTATCTAAAGAATCTTTGTATTCAACCCTGTATTCGTATATAATTCATGGCTTCATAGGTTCTTTTTTTTTTTTCCCTTCTTCTTAAAGAAGGCTTCATAAGTTCATGTTGTATATCTTTTGTAATTGCATGATTTATTTGTTCCTATCGTTCACCTCACAACTTCCTATCTATCACCATGACTTTGCAAGAAGATTGACACATATGACTTTGATTAAATCGACTTCAAAAGCATTCTTAATTGTCTTATTGGCTGTTTTCTTTTTATGGTTTTTACTGAAGACATGTTTTCAGTTACAAAAGGGCCCCCTCTAATCCCCTTTGTGCATGCAGGTGGATAAGCGATAGCCGTGATGAATATACCAAAGAAAGACTTGAGGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCATGTCCCAAGGGTTTGAACCCTGGAAAACAGATTCAAAATATCAAACAACTTCAGCTTGTGGGTTGA

mRNA sequence

TTTTTTTTTTTTTTTTTTTTTGTCACCTCTCTAATCTCTGTTTCTTCGAGACAACAATGGCGAGCGGAATCCTGAGGAGGGCAATAGCTAGGGTTTCTGCAACTCCACCTTCAAGATTCGTTCGAATTCGAGCACATGCTGCGGCTGCCGAAGCGCAGCAAGTTGAGCAGAAAGCGGCCGCCTCAACGAACCTAAAGACATTCGCAATCTACCGATGGAACCCTGATAGTCCTTCTAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGCGGCCCCATGGTGCTAGATGCGCTTATCAAAATCAAGAACGAGGTCGACCCTACTCTAACCTTCCGCCGTTCGTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTCCGTCCGGAGCTTCCTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAAAGGAAGAGCGAGCCGCCTGTGCCTGGGAAGGAGATACTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCAGAGTCCTACCTCGGACCAGCCGCTTTGCTCCATGCCAATAGGTGGATAAGCGATAGCCGTGATGAATATACCAAAGAAAGACTTGAGGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCATGTCCCAAGGGTTTGAACCCTGGAAAACAGATTCAAAATATCAAACAACTTCAGCTTGTGGGTTGA

Coding sequence (CDS)

ATGGCGAGCGGAATCCTGAGGAGGGCAATAGCTAGGGTTTCTGCAACTCCACCTTCAAGATTCGTTCGAATTCGAGCACATGCTGCGGCTGCCGAAGCGCAGCAAGTTGAGCAGAAAGCGGCCGCCTCAACGAACCTAAAGACATTCGCAATCTACCGATGGAACCCTGATAGTCCTTCTAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGCGGCCCCATGGTGCTAGATGCGCTTATCAAAATCAAGAACGAGGTCGACCCTACTCTAACCTTCCGCCGTTCGTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTCCGTCCGGAGCTTCCTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAAAGGAAGAGCGAGCCGCCTGTGCCTGGGAAGGAGATACTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCAGAGTCCTACCTCGGACCAGCCGCTTTGCTCCATGCCAATAGGTGGATAAGCGATAGCCGTGATGAATATACCAAAGAAAGACTTGAGGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCATGTCCCAAGGGTTTGAACCCTGGAAAACAGATTCAAAATATCAAACAACTTCAGCTTGTGGGTTGA

Protein sequence

MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Homology
[Close]
BLAST of CmaCh14G006870 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 461.8 bits (1187), Expect = 5.3e-129
Identity = 222/280 (79.29%), Postives = 242/280 (86.43%), Query Frame = 0 

Query: 1   MASGILRRAIARVSA--TPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDS 60
           MA G++ R +   S+  +  +R +  R  +  +EAQ          +LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPELQ+YKIDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSGA-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180
           CLTKI SG+  +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]
BLAST of CmaCh14G006870 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 453.8 bits (1166), Expect = 1.4e-126
Identity = 224/282 (79.43%), Postives = 240/282 (85.11%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPS------RFVRIRAHAAAAEAQ-QVEQKAAASTNLKTFAIYR 60
           MASG+    I R+  T PS      R +  R  +  AEA+ +        +NLKTF IYR
Sbjct: 1   MASGL----IGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYR 60

Query: 61  WNPDSPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDG 120
           WNPD+P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDG
Sbjct: 61  WNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDG 120

Query: 121 CNGLACLTKIPSGAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGK 180
           CNGLACLTKI   AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP K
Sbjct: 121 CNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAK 180

Query: 181 EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK 240
           EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK
Sbjct: 181 EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK 240

Query: 241 ERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQ 275
           ERLEAI+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ
Sbjct: 241 ERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]
BLAST of CmaCh14G006870 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 6.1e-117
Identity = 206/279 (73.84%), Postives = 231/279 (82.80%), Query Frame = 0 

Query: 2   ASGILRR---AIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDS 61
           A+ +LRR   A A +S    SR V  + H+++        KA A+T  KTF+IYRW+PDS
Sbjct: 3   AAALLRRSPAARALLSPALSSRLVASKPHSSSPAPPPPPSKAGANT--KTFSIYRWDPDS 62

Query: 62  PS-KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGL 121
           PS KP L++YK+DL +CGPMVLD L+KIKNE DP+LTFRRSCREGICGSCAMNIDG NGL
Sbjct: 63  PSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGL 122

Query: 122 ACLTKIPSGAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 181
           ACLTKI S +S STI+PLPHMFVIKDLVVDMTNFYNQYKS+EPWLKRK  PP PGKEI Q
Sbjct: 123 ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEIPQ 182

Query: 182 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 241
           +K DRAKLDGMYECILCACCSTSCPSYWWNPE YLGPAALLHANRWI DSRD++TKERL+
Sbjct: 183 TKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLD 242

Query: 242 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQL 276
           +INDEFKLYRCHTI NC  ACPKGLNP K I  IK+LQL
Sbjct: 243 SINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]
BLAST of CmaCh14G006870 vs. ExPASy Swiss-Prot
Match: P21913 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhb PE=2 SV=2)

HSP 1 Score: 345.1 bits (884), Expect = 7.2e-94
Identity = 160/243 (65.84%), Postives = 193/243 (79.42%), Query Frame = 0 

Query: 34  QQVEQKAAASTNLKTFAIYRWNPD-SPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPT 93
           ++ +  AAA+  +KTFAIYRW+PD +  KP +Q YK+DL +CGPMVLDALIKIKNE+D T
Sbjct: 29  REAQTAAAAAPRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDST 88

Query: 94  LTFRRSCREGICGSCAMNIDGCNGLACLTKIPS--GASSTITPLPHMFVIKDLVVDMTNF 153
           LTFRRSCREGICGSCAMNI+G N LAC  +I +  G  S I PLPHM+VIKDLV D++NF
Sbjct: 89  LTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNF 148

Query: 154 YNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESY 213
           Y QYKSIEP+LK+K E     ++ LQS +DR KLDG+YECILCACCSTSCPSYWWN + Y
Sbjct: 149 YAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKY 208

Query: 214 LGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNI 273
           LGPA L+ A RW+ DSRDE+T+ERL  + D F LYRCHTI+NC + CPKGLNPGK I  I
Sbjct: 209 LGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEI 268

[Close]
BLAST of CmaCh14G006870 vs. ExPASy Swiss-Prot
Match: B0BM36 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenopus tropicalis OX=8364 GN=sdhb PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.2e-94
Identity = 164/249 (65.86%), Postives = 193/249 (77.51%), Query Frame = 0 

Query: 28  AAAAEAQQVEQKAAASTNLKTFAIYRWNPDSP-SKPELQEYKIDLKECGPMVLDALIKIK 87
           AAAA A Q E +      +K FAIYRW+PD P  KP +Q Y++DL ECG MVLDALIKIK
Sbjct: 31  AAAAPASQAEAR------IKKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIK 90

Query: 88  NEVDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGAS--STITPLPHMFVIKDLV 147
           NE+DPTLTFRRSCREGICGSCAMNI+G N LAC  +I +  S  S I PLPHM+V+KDLV
Sbjct: 91  NEMDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLV 150

Query: 148 VDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYW 207
            D++NFY QYKSIEP+LK+K E     ++ LQS +DR KLDG+YECILCACCSTSCPSYW
Sbjct: 151 PDLSNFYAQYKSIEPYLKKKDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYW 210

Query: 208 WNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPG 267
           WN + YLGPA L+ A RW+ DSRD+YT+ERL  + D F LYRCHTI+NC R CPKGLNPG
Sbjct: 211 WNADKYLGPAVLMQAYRWMIDSRDDYTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPG 270

Query: 268 KQIQNIKQL 274
           K I  IK++
Sbjct: 271 KAIAEIKKM 273

[Close]
BLAST of CmaCh14G006870 vs. ExPASy TrEMBL
Match: A0A6J1J748 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111481863 PE=3 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.0e-160
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CmaCh14G006870 vs. ExPASy TrEMBL
Match: A0A6J1F9C7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441997 PE=3 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.1e-158
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSAT PSRFVRIRAHA+AAEAQQVEQKAAASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CmaCh14G006870 vs. ExPASy TrEMBL
Match: E5GCD7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.6e-152
Identity = 261/277 (94.22%), Postives = 271/277 (97.83%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRR ++RVSA+ PSRFVRIRAHA+ AEAQQVEQKA AS+NLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]
BLAST of CmaCh14G006870 vs. ExPASy TrEMBL
Match: A0A1S3BP14 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491745 PE=3 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.6e-152
Identity = 261/277 (94.22%), Postives = 271/277 (97.83%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRR ++RVSA+ PSRFVRIRAHA+ AEAQQVEQKA AS+NLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]
BLAST of CmaCh14G006870 vs. ExPASy TrEMBL
Match: A0A6J1DJI7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021478 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 2.7e-152
Identity = 262/277 (94.58%), Postives = 271/277 (97.83%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+G+LRR I+RVSATP SRFVRIRAHA+ A+AQQVEQKAAA++NLKTFAIYRWNPDSPS
Sbjct: 1   MATGMLRRTISRVSATPFSRFVRIRAHASEAQAQQVEQKAAAASNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS P VPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSAPSVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQLVG 277

[Close]
BLAST of CmaCh14G006870 vs. NCBI nr
Match: XP_022983213.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 573.2 bits (1476), Expect = 1.2e-159
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CmaCh14G006870 vs. NCBI nr
Match: XP_022935005.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita moschata] >KAG7017798.1 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 568.9 bits (1465), Expect = 2.3e-158
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSAT PSRFVRIRAHA+AAEAQQVEQKAAASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CmaCh14G006870 vs. NCBI nr
Match: XP_023527486.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567.4 bits (1461), Expect = 6.8e-158
Identity = 274/277 (98.92%), Postives = 275/277 (99.28%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSAT PSRFVRIRAHA+AAEAQQVEQK AASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKVAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CmaCh14G006870 vs. NCBI nr
Match: XP_038898422.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 549.7 bits (1415), Expect = 1.5e-152
Identity = 264/276 (95.65%), Postives = 271/276 (98.19%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRRAI+RVSAT PSRFVRIRAHA+ AEAQQVEQKAAAS+NLKTFAIYRWNP+SPS
Sbjct: 1   MATGILRRAISRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SGASS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKISSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLV 277
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLV
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQLV 276

[Close]
BLAST of CmaCh14G006870 vs. NCBI nr
Match: XP_008450036.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucumis melo] >ADN34136.1 succinate dehydrogenase [Cucumis melo subsp. melo])

HSP 1 Score: 548.5 bits (1412), Expect = 3.3e-152
Identity = 261/277 (94.22%), Postives = 271/277 (97.83%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRR ++RVSA+ PSRFVRIRAHA+ AEAQQVEQKA AS+NLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]
BLAST of CmaCh14G006870 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 461.8 bits (1187), Expect = 3.8e-130
Identity = 222/280 (79.29%), Postives = 242/280 (86.43%), Query Frame = 0 

Query: 1   MASGILRRAIARVSA--TPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDS 60
           MA G++ R +   S+  +  +R +  R  +  +EAQ          +LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPELQ+YKIDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSGA-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180
           CLTKI SG+  +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]
BLAST of CmaCh14G006870 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-127
Identity = 224/282 (79.43%), Postives = 240/282 (85.11%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPS------RFVRIRAHAAAAEAQ-QVEQKAAASTNLKTFAIYR 60
           MASG+    I R+  T PS      R +  R  +  AEA+ +        +NLKTF IYR
Sbjct: 1   MASGL----IGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYR 60

Query: 61  WNPDSPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDG 120
           WNPD+P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDG
Sbjct: 61  WNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDG 120

Query: 121 CNGLACLTKIPSGAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGK 180
           CNGLACLTKI   AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP K
Sbjct: 121 CNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAK 180

Query: 181 EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK 240
           EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK
Sbjct: 181 EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK 240

Query: 241 ERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQ 275
           ERLEAI+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ
Sbjct: 241 ERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]
BLAST of CmaCh14G006870 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-127
Identity = 224/282 (79.43%), Postives = 240/282 (85.11%), Query Frame = 0 

Query: 1   MASGILRRAIARVSATPPS------RFVRIRAHAAAAEAQ-QVEQKAAASTNLKTFAIYR 60
           MASG+    I R+  T PS      R +  R  +  AEA+ +        +NLKTF IYR
Sbjct: 1   MASGL----IGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYR 60

Query: 61  WNPDSPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDG 120
           WNPD+P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDG
Sbjct: 61  WNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDG 120

Query: 121 CNGLACLTKIPSGAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGK 180
           CNGLACLTKI   AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP K
Sbjct: 121 CNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAK 180

Query: 181 EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK 240
           EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK
Sbjct: 181 EILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTK 240

Query: 241 ERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQ 275
           ERLEAI+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ
Sbjct: 241 ERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]
BLAST of CmaCh14G006870 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 322.8 bits (826), Expect = 2.7e-88
Identity = 155/234 (66.24%), Postives = 178/234 (76.07%), Query Frame = 0 

Query: 47  KTFAIYRWNPDSP-SKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICG 106
           K F IYRWNPD P SKP LQ + +DL  CGPMVLD L KIK E D +L++RRSCREGICG
Sbjct: 67  KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICG 126

Query: 107 SCAMNIDGCNGLACLTKIPSGAS--STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
           SC+MNIDG N +ACL  I    S  + ITPLPHM+VIKDLVVD+TNFY QYKS+EPWLK 
Sbjct: 127 SCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKT 186

Query: 167 KSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 226
           + +PP  G+E  QS KDR KLDG+YECILCACC+TSCPSYWWNPE + GPAALL A RWI
Sbjct: 187 R-KPPKDGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWI 246

Query: 227 SDSRDEYTKERLEAIND-EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLV 277
           SDSRDEY +ERL+AI + E K+YRC  I NC   CPKGLNP   I  +K   L+
Sbjct: 247 SDSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLNPASAILKMKSKHLL 299

The following BLAST results are available for this feature:
BLAST of CmaCh14G006870 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LB025.3e-12979.29Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara... [more]
Q8LBZ71.4e-12679.43Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara... [more]
Q9S8276.1e-11773.84Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory... [more]
P219137.2e-9465.84Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattu... [more]
B0BM367.2e-9465.86Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenop... [more]
BLAST of CmaCh14G006870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J7486.0e-160100.00Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur... [more]
A0A6J1F9C71.1e-15899.28Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur... [more]
E5GCD71.6e-15294.22Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum... [more]
A0A1S3BP141.6e-15294.22Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum... [more]
A0A6J1DJI72.7e-15294.58Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Momor... [more]
BLAST of CmaCh14G006870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022983213.11.2e-159100.00succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur... [more]
XP_022935005.12.3e-15899.28succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [... [more]
XP_023527486.16.8e-15898.92succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur... [more]
XP_038898422.11.5e-15295.65succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Benin... [more]
XP_008450036.13.3e-15294.22PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochond... [more]
BLAST of CmaCh14G006870 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G40650.13.8e-13079.29succinate dehydrogenase 2-2 [more]
AT3G27380.11.0e-12779.43succinate dehydrogenase 2-1 [more]
AT3G27380.21.0e-12779.43succinate dehydrogenase 2-1 [more]
AT5G65165.12.7e-8866.24succinate dehydrogenase 2-3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 36..146
e-value: 1.9E-40
score: 139.2
NoneNo IPR availablePFAMPF13534Fer4_17coord: 189..262
e-value: 2.4E-9
score: 37.6
NoneNo IPR availablePANTHERPTHR11921:SF44SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIALcoord: 15..274
NoneNo IPR availablePANTHERPTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINcoord: 15..274
NoneNo IPR availableSUPERFAMILY46548alpha-helical ferredoxincoord: 147..273
IPR009051Alpha-helical ferredoxinGENE3D1.10.1060.10coord: 147..276
e-value: 2.0E-52
score: 178.4
IPR004489Succinate dehydrogenase/fumarate reductase iron-sulphur proteinTIGRFAMTIGR00384TIGR00384coord: 51..271
e-value: 5.1E-84
score: 279.1
IPR025192Succinate dehydogenase/fumarate reductase N-terminalPFAMPF13085Fer2_3coord: 48..151
e-value: 1.4E-32
score: 111.9
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 99..107
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 190..201
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 60..137
score: 9.447795
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 62..112
e-value: 0.00557818
score: 33.1372
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 180..210
score: 7.894782
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 46..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G006870.1CmaCh14G006870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022904 respiratory electron transport chain
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045273 respiratory chain complex II
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity