CmaCh14G002360 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAACTGTCCAACTTTGAAGTCAAACGTTCAAAGCTGGGCCGGCCGGCTTCCCATTTGTTTTCTAAATCCCTTCGGCTTTCTCTGACCTAGAGATCATCGGTGTAAGCTTGGACTTTAATGGCGGTTCCAGGCAGACGCAACGGTGTCGTAGATGAAGACGATTACGAGGAAGATAATGCCCTCTTTGAAGAGAATGGTGTCATTGAATTCGATTCCGACACGCCACCTCACCTCCGCGCCCTAGCTACCGCCGCACAGCTCGGCGACGTTAATGGCCTTCGTACCGCTATAGGTTCAACTTATTCCTTCAACTCGCGCTGCGATTCTCTGCCAGTTCTGTTGCTACACTTTTCTGTTAATTTTACTGGATTATTCACTGTCCTGATTAGGTCGGGATGATCTTTTTTCGATTAATTTTACAACGTTCTTCTGCTTAAATACCTGATCATCATTCAATTAGTCTACTCTGAAAAGATGGTAGTTTTAATGAATGCATGTTGGTTTTCTTGTTCATTTCAATTGTGATGAGGTCTTAATGGGAGCTCCTCTTTTGGTCTATGACAATTTTATCTCAGAAAGTTTTTGTGTGTATCTTTTATGTTTATGTTGATGCAGAATCAATTGCATGGAGAGGAAACTACATGTAATTCATTTCATTGAGTGGTTTGCATTTTATGATATTCTATCTTCATACCACTAGTGTCTTTCATATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTGTAAGCTATGTGAATCGAGGCCTCTGGTTTTAATTTTTCTGGAGCTCTTTTTCTCGTTATGAGTTTAATGTTAATGTTGCCTCCCTTGTCGGCTTTCTTGCAGATAACTTAACGATGGGAAGTATAAATGACGCTGTGGAAGATGGGGACACTGTTCTACACCTTACCTGTCTATATGGCCATCTGCCATGTGTCCAGGTTGGCTACCCTATGCAAGCTTCGACATATTTTATTTTGAACTTTTTATGATTTGTGACTTATTTTTAAATAAATTAATCTTTATATAGTTGCTGGTGGAAAGAGGGGCAAACTTGGAGGTTCAAGATGAAGATGGTGCGATTCCTTTGCATGATGCTTGTGCTGGGGGTGAGTAGGCTGTTATAAATAATTTCCACTTTTGAGCTCACAGTACTAAAAGATTTAGCTCTTCAAAATGTTGTTATGCGTTTGAGTGCTGCTTTTTTCTGATCTTCATCCGGGTTCCTAAATTTTCCATTGGAATTTCTTTCATTATCTTGAACTCGATAGTGAAGGTTTTGGAATGGGCTTTTTCTTCTTTTCTTTTTCGGTATGCCGCTCCGCGATCAAGGAGTGTGGAATAAGCCAAACGAGTCTTGCTGGTCTCATTCTTTTTTTTCTCCTCCTCCAATGATCTGTGCAGGTTATGTAGAGATTGTACAATTCCTAATAAATAGTGCTAACGGCACAGATGGTGTGAAGAGGATGCTAGAGTCAGTTGATGCAGAAGGTGACACTGTAAGTAGCTGGTTTATCTTCGATGTCCAAAGTTTTATCCTTTTTGATAAACAGATAGCTAAGTTTTTTCAATTGCCCGTAGCAAATATTTGCTAGTAGCAACGACCATGTTGTACTATACCTTCCTTGTTGATGCATTAAAATATAGAAAATACACCTAGTTTTTTTGGCTTTATGGTAAAGCACAGGGCAACATTATTCTTGAAATTTTGTCCGTGGTACGGTTACATTTGCTTCTTCAACAATATGAATAATGGACTTTTGTAAGTTTAAGAAATCCTTTTACACATCACACATGCTATCGAATGGTATCTGCCTGCTCTTGGTGAAAAGAAATAATGAGTACCTATATCTTTGTAGCATAACTTTCTAGAAAACTTTTAAAACCGTCATCGAGTAGTAATCAGTTCCAATAATGCTATTGCAACCAAATTGATCGTGAACATTATTTTTACAGCCTCTTCATCATGCTGCAAGAGGCGAGCATGCCGCAGTTGTAAGGTTGCTACTAGCTTCAGGGGCATCTCCCACCAAGGAGAATACATACGGGAAGGTTTGTATTTTGAGTGAATATTGGAACTTCATCTTCCTGTATTTGGCGGTGCCCATTTTCTAAAGTATTGCTTCTGTTTAACAGGCCCCAACTGAACTTGCCGATCCCGGGACAGAGGCCAGGACGATTCTGGAAGCTGCCTCAGCCCACATGGCGATGGGGTGTGAGTAGGCTCCATCTGATAGCGGTGCTTAAAATGACTTGGGCAACTTCTTGGGCTTCACAGTTTTAGGTTTATTGTCTCTAACTTTGTTGATAGTGTTTCAGTTTTCTTTTTCTTAAGTTTATTCTACTACTACAGAGACGCTTTCATGTTTAGATATGAAAGTTTTATAATATTGGAGAGGTAGACATGTTATTTTAGAATCTTTGGTTGCATTCTATTTAGTAACATTGGAGTAATTCAAGTGATTTTTTTAGAGCCTTTGTAGGTTGAGAGTATTGTAAAACATAATTTTGTATGAAAAATAGTCAAGAACTGAAAATATTAGGTTGAACAATCTGATGGATTCCCCTAATAAACAGGGCCTAAATGAGCAACGTAATCATTGCTAGTTGGTAGTGTAACTGGGAAACAAGATGGTGAATATTACCAAGTTTATGTCCCTTTATAATATGTTAGAAATTAAATTCAAGAAGAATTCAGATGGGATCCATTTTATCAAAAACATTTTCTTTGTGAACCAAACTTGTGGTTGGGGGAGGAGTTTCCGGTGATTGCCTTTCCAACATGAAGGGGCCATTGGTTGCCTAATACTGTTTATGCTATAAGTCCACCACTTTGGCTCATTACGTATTGTTGTTTGCTTTACGGTTTTAAAATGCATCTATTAGGGTGAAGTCTCACAATCCACCCCCTTGGAGCGTTCCACTCTCTGACCGATGTGAGATCTCACAATTCACTCCCTAGGAGTCCAACGTCCTCATTTGCACACTGCCCGATGACTGGCTCTGATACAATTTGTGACAACTCTTAGTATCCTTGGCTGGCACACCATTCGATGACTAACTTTGATATCATTTGTGACAGCTCAAGTCTACCAATAGTAGATGTTGCTTTGACCGATTATGTATCCCTCACGATTTTAAAATGCGTTTGTTAGAGAGTGGTTTCTACATCTTTAATGTTTCATTTCACTTCACTCTCCAATCGATGCGGAGATCTCACAAAC CAAAACTGTCCAACTTTGAAGTCAAACGTTCAAAGCTGGGCCGGCCGGCTTCCCATTTGTTTTCTAAATCCCTTCGGCTTTCTCTGACCTAGAGATCATCGGTGTAAGCTTGGACTTTAATGGCGGTTCCAGGCAGACGCAACGGTGTCGTAGATGAAGACGATTACGAGGAAGATAATGCCCTCTTTGAAGAGAATGGTGTCATTGAATTCGATTCCGACACGCCACCTCACCTCCGCGCCCTAGCTACCGCCGCACAGCTCGGCGACGTTAATGGCCTTCGTACCGCTATAGATAACTTAACGATGGGAAGTATAAATGACGCTGTGGAAGATGGGGACACTGTTCTACACCTTACCTGTCTATATGGCCATCTGCCATGTGTCCAGTTGCTGGTGGAAAGAGGGGCAAACTTGGAGGTTCAAGATGAAGATGGTGCGATTCCTTTGCATGATGCTTGTGCTGGGGGTTATGTAGAGATTGTACAATTCCTAATAAATAGTGCTAACGGCACAGATGGTGTGAAGAGGATGCTAGAGTCAGTTGATGCAGAAGGTGACACTCCTCTTCATCATGCTGCAAGAGGCGAGCATGCCGCAGTTGTAAGGTTGCTACTAGCTTCAGGGGCATCTCCCACCAAGGAGAATACATACGGGAAGGCCCCAACTGAACTTGCCGATCCCGGGACAGAGGCCAGGACGATTCTGGAAGCTGCCTCAGCCCACATGGCGATGGGGTGTGAGTAGGCTCCATCTGATAGCGGTGCTTAAAATGACTTGGGCAACTTCTTGGGCTTCACAGTTTTAGGTTTATTGTCTCTAACTTTGTTGATAGTGTTTCAGTTTTCTTTTTCTTAAGTTTATTCTACTACTACAGAGACGCTTTCATGTTTAGATATGAAAGTTTTATAATATTGGAGAGGTAGACATGTTATTTTAGAATCTTTGGTTGCATTCTATTTAGTAACATTGGAGTAATTCAAGTGATTTTTTTAGAGCCTTTGTAGGTTGAGAGTATTGTAAAACATAATTTTGTATGAAAAATAGTCAAGAACTGAAAATATTAGGTTGAACAATCTGATGGATTCCCCTAATAAACAGGGCCTAAATGAGCAACGTAATCATTGCTAGTTGGTAGTGTAACTGGGAAACAAGATGGTGAATATTACCAAGTTTATGTCCCTTTATAATATGTTAGAAATTAAATTCAAGAAGAATTCAGATGGGATCCATTTTATCAAAAACATTTTCTTTGTGAACCAAACTTGTGGTTGGGGGAGGAGTTTCCGGTGATTGCCTTTCCAACATGAAGGGGCCATTGGTTGCCTAATACTGTTTATGCTATAAGTCCACCACTTTGGCTCATTACGTATTGTTGTTTGCTTTACGGTTTTAAAATGCATCTATTAGGGTGAAGTCTCACAATCCACCCCCTTGGAGCGTTCCACTCTCTGACCGATGTGAGATCTCACAATTCACTCCCTAGGAGTCCAACGTCCTCATTTGCACACTGCCCGATGACTGGCTCTGATACAATTTGTGACAACTCTTAGTATCCTTGGCTGGCACACCATTCGATGACTAACTTTGATATCATTTGTGACAGCTCAAGTCTACCAATAGTAGATGTTGCTTTGACCGATTATGTATCCCTCACGATTTTAAAATGCGTTTGTTAGAGAGTGGTTTCTACATCTTTAATGTTTCATTTCACTTCACTCTCCAATCGATGCGGAGATCTCACAAAC ATGGCGGTTCCAGGCAGACGCAACGGTGTCGTAGATGAAGACGATTACGAGGAAGATAATGCCCTCTTTGAAGAGAATGGTGTCATTGAATTCGATTCCGACACGCCACCTCACCTCCGCGCCCTAGCTACCGCCGCACAGCTCGGCGACGTTAATGGCCTTCGTACCGCTATAGATAACTTAACGATGGGAAGTATAAATGACGCTGTGGAAGATGGGGACACTGTTCTACACCTTACCTGTCTATATGGCCATCTGCCATGTGTCCAGTTGCTGGTGGAAAGAGGGGCAAACTTGGAGGTTCAAGATGAAGATGGTGCGATTCCTTTGCATGATGCTTGTGCTGGGGGTTATGTAGAGATTGTACAATTCCTAATAAATAGTGCTAACGGCACAGATGGTGTGAAGAGGATGCTAGAGTCAGTTGATGCAGAAGGTGACACTCCTCTTCATCATGCTGCAAGAGGCGAGCATGCCGCAGTTGTAAGGTTGCTACTAGCTTCAGGGGCATCTCCCACCAAGGAGAATACATACGGGAAGGCCCCAACTGAACTTGCCGATCCCGGGACAGAGGCCAGGACGATTCTGGAAGCTGCCTCAGCCCACATGGCGATGGGGTGTGAGTAG MAVPGRRNGVVDEDDYEEDNALFEENGVIEFDSDTPPHLRALATAAQLGDVNGLRTAIDNLTMGSINDAVEDGDTVLHLTCLYGHLPCVQLLVERGANLEVQDEDGAIPLHDACAGGYVEIVQFLINSANGTDGVKRMLESVDAEGDTPLHHAARGEHAAVVRLLLASGASPTKENTYGKAPTELADPGTEARTILEAASAHMAMGCE Homology
BLAST of CmaCh14G002360 vs. ExPASy Swiss-Prot
Match: Q99728 (BRCA1-associated RING domain protein 1 OS=Homo sapiens OX=9606 GN=BARD1 PE=1 SV=2) HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15 Identity = 39/115 (33.91%), Postives = 68/115 (59.13%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy Swiss-Prot
Match: Q6UB98 (Ankyrin repeat domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ANKRD12 PE=1 SV=3) HSP 1 Score: 82.8 bits (203), Expect = 5.0e-15 Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy Swiss-Prot
Match: A9JR78 (Tonsoku-like protein OS=Danio rerio OX=7955 GN=tonsl PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.5e-14 Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy Swiss-Prot
Match: Q5REW9 (Ankyrin repeat domain-containing protein 27 OS=Pongo abelii OX=9601 GN=ANKRD27 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14 Identity = 54/152 (35.53%), Postives = 77/152 (50.66%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy Swiss-Prot
Match: Q9H2K2 (Poly [ADP-ribose] polymerase tankyrase-2 OS=Homo sapiens OX=9606 GN=TNKS2 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14 Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy TrEMBL
Match: A0A6J1J6D4 (tankyrase-2 OS=Cucurbita maxima OX=3661 GN=LOC111481754 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy TrEMBL
Match: A0A6J1F1S2 (tankyrase-2 OS=Cucurbita moschata OX=3662 GN=LOC111441383 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 2.7e-112 Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy TrEMBL
Match: A0A6J1CTX1 (tankyrase-2 OS=Momordica charantia OX=3673 GN=LOC111014248 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 7.8e-104 Identity = 189/208 (90.87%), Postives = 201/208 (96.63%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy TrEMBL
Match: A0A5D3DNG9 (Tankyrase-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002930 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 4.8e-101 Identity = 187/209 (89.47%), Postives = 199/209 (95.22%), Query Frame = 0
BLAST of CmaCh14G002360 vs. ExPASy TrEMBL
Match: A0A1S3B6E0 (tankyrase-2 OS=Cucumis melo OX=3656 GN=LOC103486520 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 4.8e-101 Identity = 187/209 (89.47%), Postives = 199/209 (95.22%), Query Frame = 0
BLAST of CmaCh14G002360 vs. NCBI nr
Match: XP_022983109.1 (tankyrase-2 [Cucurbita maxima]) HSP 1 Score: 418.7 bits (1075), Expect = 2.9e-113 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of CmaCh14G002360 vs. NCBI nr
Match: XP_022934112.1 (tankyrase-2 [Cucurbita moschata] >KAG7017388.1 BRCA1-associated RING domain protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 414.5 bits (1064), Expect = 5.6e-112 Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of CmaCh14G002360 vs. NCBI nr
Match: XP_023526415.1 (tankyrase-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-110 Identity = 203/208 (97.60%), Postives = 206/208 (99.04%), Query Frame = 0
BLAST of CmaCh14G002360 vs. NCBI nr
Match: XP_022144606.1 (tankyrase-2 [Momordica charantia]) HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103 Identity = 189/208 (90.87%), Postives = 201/208 (96.63%), Query Frame = 0
BLAST of CmaCh14G002360 vs. NCBI nr
Match: XP_038905294.1 (poly [ADP-ribose] polymerase tankyrase [Benincasa hispida]) HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103 Identity = 190/208 (91.35%), Postives = 200/208 (96.15%), Query Frame = 0
BLAST of CmaCh14G002360 vs. TAIR 10
Match: AT3G09890.1 (Ankyrin repeat family protein ) HSP 1 Score: 258.1 bits (658), Expect = 6.2e-69 Identity = 130/200 (65.00%), Postives = 157/200 (78.50%), Query Frame = 0
BLAST of CmaCh14G002360 vs. TAIR 10
Match: AT3G09890.2 (Ankyrin repeat family protein ) HSP 1 Score: 189.1 bits (479), Expect = 3.5e-48 Identity = 94/149 (63.09%), Postives = 117/149 (78.52%), Query Frame = 0
BLAST of CmaCh14G002360 vs. TAIR 10
Match: AT4G19150.1 (Ankyrin repeat family protein ) HSP 1 Score: 68.9 bits (167), Expect = 5.3e-12 Identity = 48/156 (30.77%), Postives = 82/156 (52.56%), Query Frame = 0
BLAST of CmaCh14G002360 vs. TAIR 10
Match: AT2G17390.1 (ankyrin repeat-containing 2B ) HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11 Identity = 40/143 (27.97%), Postives = 70/143 (48.95%), Query Frame = 0
BLAST of CmaCh14G002360 vs. TAIR 10
Match: AT2G25600.1 (Shaker pollen inward K+ channel ) HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11 Identity = 45/147 (30.61%), Postives = 66/147 (44.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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