CmaCh14G001650 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G001650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Actin-depolymerizing factor
Location	Cma_Chr14: 667796 .. 670005 (-)
RNA-Seq Expression	CmaCh14G001650
Synteny	CmaCh14G001650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCGCAGCCAGAGGTACCGCCCCACGTCCATGGACACGTGGCGCATGTTGGTTGGATGGTCACCATTTACTGCCAGCTGTCAAATGTAAGTCACCGCCACGATAGCGTTGCTCCCGAGCACCAACACAGAGAAAAAAATAATAAATAATAAGAAAAAGGACCCAACAAGAAAACCGCTATAAAAGCCAGTCTACATTTGTTTCTCATTTCTGAGCCCGCCTTCTTCATCATCTTCATCATCTTCATCATCGGAGCTTCTTCTGTTTCCTCTCAAAATGGTGAGTTCTTCTGAAGTTTACTTACTTTCTGCTATTCTTCGTGGTTTGACGATCGTTTGGTTCTTGAGAAAGTAGGATTCTATTTCTAGTTTGCAACTTTCAAAATAACTACACTCTTGCGATCGGGAGTTTCTTGCAATTTGCGGAGTCTTTGAATCTTTGTATATAACTTTGAAGTCGTAATCCGCATGCAGTTTCTGTGGTGGGGAGTGAATGTGTTCTGTTCCCTAGGAGATCGGATTTGAATTCTTCTGTGGTTGTTTCAACTAAACGAAACGTCATGTTCTTTGATTTATTGTCGACTTTGAGTGATCGAGTGGCCGTGGATCTATCACAATCTTCGTTTTTATTTTTGCACTTCTTGTTATGTTACATTTGAAATTTTTTGTCAAGGATTGCAATTACAAGTTAATATTCGTGTATTCCCCCTTTTGAACCTTTTGAATTGCTATTAATCTTCTTATGCATGTTGTAAATGAGGGGGAAACTCTGTTAGGTTGTGATGCCTGTCTCTGATCCATATTTTGTTTGTTCCTTTGTTTTAAGTTTGGATGAAATCAATATCAACTATCAAGCTACGGATAAAAGCTTATGGGGGAAAATCTTATCCTGTCCATATTCTTATCTTGCGTGGATGAGGAAGAGAATCCATACCATTTACTTGTTACATGGTTATCTTAATTTGACTTAGTGGTTCTCAAAGCTGGAGGCGCACTAAAGTGTAACAGAAAGGTTTTTAAGAAAATAAACTTCTTGTTTGAGATCGTATGAATGTTTTATACATTGCTTTCTCTAAAATATTAGAAAAGAAAAAGTGGGAAGTTACTCTCAGTAGCTTCGTTAAGGGAACCTTTGCTTCAAAGGCTTATTTGAAGCAAGGCGTAGAGGCTGAAGTGTAACAGAAAGGTTTTTAAGAAAATAAGCTTCTTGTTTGAGATCGTATGAATGTTTATACATTGCTTTCTCTAAATTATTAGAAAAGAAAAACTAGGAAGTCACTCTCAGTAGCTTCGTTAAGGGAACCTTTGCTTCAAACGCTTATTTGAAGCAAGGCGTAGAGGCTGACCTTGGGGCTCAAGCGTGTCTTGGTGCGTGCCTCGGTGGGCTTCTTAAAACACTGATTTGACTAAACATGACTATAAATTGATGGCTAAGATAAGGCTCTCAAGGGAAAAACAGAACAATTGTTGAAAATTTGAAAAATCTGATTAGATCAGAAAAATTCTCTCGTTCCCAATTTTATGCATGTCCAGTGTTGGGTTAAAGATCAATCACCCCACTGCTTTGCTTTGTAGCCTTTATTTGTATTGCTGTATTTCCAACAACGTTTAATTTTCCAACTTTGTTCTTCCTTTTCAACTCTTTGTGTATGCATCTCTTCTGGACTTCAAAATTTTATTAAACAGTTTCGTTCTGGATTTCATAGGCCAATGCTGCATCGGGAATAGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTCAAAGCAAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAAGAGAAGCAAAAGCAAGTTGTCGTAGAGAAAGTTGGCGAGCCAACACAAAGCTACGAGGACTTTGCTGCAAGCCTTCCTGCAGACGAATGTCGTTATGCTATCTATGATTTTGACTTTGTTACCAAAGAGAACTGTCAAAAGAGCAGAATCTTCTTTATTGCCTGGTATGGCTGATATCTCCTTTACTGCATTCCTTTCATGTTTATCTTTCCCACCACTGCGGTCTTACGAAAACACCATTGCTTGAAGGTCCCCTGATAATTCAAGAGTCAGAAGCAAAATGATTTATGCCAGCTCCAAAGATAGATTCAAGAGAGAACTGGATGGATTTCAGGTAGAACTGCAAGCAACGGATCCGACTGAGATGGGGCTTGATGTCATTCGAAGCCGAGTTGGCTGA

mRNA sequence

ATGCGGCGCAGCCAGAGGTACCGCCCCACGTCCATGGACACGTGGCGCATGTTGGTTGGATGGTCACCATTTACTGCCAGCTGTCAAATCCCGCCTTCTTCATCATCTTCATCATCTTCATCATCGGAGCTTCTTCTGTTTCCTCTCAAAATGGCCAATGCTGCATCGGGAATAGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTCAAAGCAAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAAGAGAAGCAAAAGCAAGTTGTCGTAGAGAAAGTTGGCGAGCCAACACAAAGCTACGAGGACTTTGCTGCAAGCCTTCCTGCAGACGAATGTCGTTATGCTATCTATGATTTTGACTTTGTTACCAAAGAGAACTGTCAAAAGAGCAGAATCTTCTTTATTGCCTGGTCCCCTGATAATTCAAGAGTCAGAAGCAAAATGATTTATGCCAGCTCCAAAGATAGATTCAAGAGAGAACTGGATGGATTTCAGGTAGAACTGCAAGCAACGGATCCGACTGAGATGGGGCTTGATGTCATTCGAAGCCGAGTTGGCTGA

Coding sequence (CDS)

ATGCGGCGCAGCCAGAGGTACCGCCCCACGTCCATGGACACGTGGCGCATGTTGGTTGGATGGTCACCATTTACTGCCAGCTGTCAAATCCCGCCTTCTTCATCATCTTCATCATCTTCATCATCGGAGCTTCTTCTGTTTCCTCTCAAAATGGCCAATGCTGCATCGGGAATAGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTCAAAGCAAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAAGAGAAGCAAAAGCAAGTTGTCGTAGAGAAAGTTGGCGAGCCAACACAAAGCTACGAGGACTTTGCTGCAAGCCTTCCTGCAGACGAATGTCGTTATGCTATCTATGATTTTGACTTTGTTACCAAAGAGAACTGTCAAAAGAGCAGAATCTTCTTTATTGCCTGGTCCCCTGATAATTCAAGAGTCAGAAGCAAAATGATTTATGCCAGCTCCAAAGATAGATTCAAGAGAGAACTGGATGGATTTCAGGTAGAACTGCAAGCAACGGATCCGACTGAGATGGGGCTTGATGTCATTCGAAGCCGAGTTGGCTGA

Protein sequence

MRRSQRYRPTSMDTWRMLVGWSPFTASCQIPPSSSSSSSSSSELLLFPLKMANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLPADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPTEMGLDVIRSRVG

Homology

[Close]

BLAST of CmaCh14G001650 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 9.7e-66
Identity = 122/139 (87.77%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AV+DDCKLKFLELKAKRTYRFI++KIEEKQK+VVVEK+GEPT+SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYA+YDFDF+TKEN QKSRIFFIAWSPD +RVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDV RSR G
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]

BLAST of CmaCh14G001650 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.4e-64
Identity = 120/137 (87.59%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+GEPT+SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           P +ECRYA+YDFDFVT ENCQKSRIFFIAW PD +RVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 171 LQATDPTEMGLDVIRSR 188
           LQA DPTEMGLDVI+SR
Sbjct: 121 LQACDPTEMGLDVIQSR 137

[Close]

BLAST of CmaCh14G001650 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 2.6e-63
Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYAIYDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 171 LQATDPTEMGLDVIRSRV 189
           LQATDPTEM LDV++SRV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138

[Close]

BLAST of CmaCh14G001650 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-62
Identity = 116/137 (84.67%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AV+D+CKLKFLELKAKRTYRFI++KI+EK+K VVVEKVGEP  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PA+ECRYAI+D+DFVT+ENCQKS+IFFIAWSPD SRVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 171 LQATDPTEMGLDVIRSR 188
           LQATDPTE+GLDVIR R
Sbjct: 121 LQATDPTEVGLDVIRGR 137

[Close]

BLAST of CmaCh14G001650 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-62
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYAIYDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 171 LQATDPTEMGLDVIRSR 188
           LQATDPTEM LDV RSR
Sbjct: 121 LQATDPTEMDLDVFRSR 137

[Close]

BLAST of CmaCh14G001650 vs. ExPASy TrEMBL
Match: A0A6J1J833 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482130 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.7e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of CmaCh14G001650 vs. ExPASy TrEMBL
Match: A0A6J1F4F4 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442017 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYAIYDFDFVT+ENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of CmaCh14G001650 vs. ExPASy TrEMBL
Match: A0A6J1L3B8 (actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498729 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           P+DECRYA+YDFDFVT+ENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of CmaCh14G001650 vs. ExPASy TrEMBL
Match: A0A6J1G2E2 (actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450067 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           P+DECRYA+YDFDFVT+ENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of CmaCh14G001650 vs. ExPASy TrEMBL
Match: A0A0A0LFL5 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734880 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 134/139 (96.40%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASGIAV+DDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFA SL
Sbjct: 1   MANAASGIAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAKSL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           P+DECRYAIYDFDFVT+ENCQKSRIFFIAWSPD+SRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIAWSPDSSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of CmaCh14G001650 vs. NCBI nr
Match: XP_022983563.1 (actin-depolymerizing factor 2-like [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 9.6e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of CmaCh14G001650 vs. NCBI nr
Match: XP_022935027.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023528602.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6580558.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.8 bits (704), Expect = 2.8e-70
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYAIYDFDFVT+ENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of CmaCh14G001650 vs. NCBI nr
Match: XP_023528601.1 (actin-depolymerizing factor 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.4 bits (703), Expect = 3.7e-70
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 50  KMANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAAS 109
           K ANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAAS
Sbjct: 45  KKANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAAS 104

Query: 110 LPADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQV 169
           LPADECRYAIYDFDFVT+ENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQV
Sbjct: 105 LPADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQV 164

Query: 170 ELQATDPTEMGLDVIRSRVG 190
           ELQATDPTEMGLDVIRSRVG
Sbjct: 165 ELQATDPTEMGLDVIRSRVG 184

[Close]

BLAST of CmaCh14G001650 vs. NCBI nr
Match: KAG7017313.1 (Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.6 bits (701), Expect = 6.2e-70
Identity = 146/168 (86.90%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 26  ASCQIPPSSSSSSSSSSELLLFP----LKMANAASGIAVNDDCKLKFLELKAKRTYRFIV 85
           + C + P  S  +SS   L L P     K ANAASGIAVNDDCKLKFLELKAKRTYRFIV
Sbjct: 36  SECVLFPRRSDLNSSVWFLKLEPPLKCKKKANAASGIAVNDDCKLKFLELKAKRTYRFIV 95

Query: 86  FKIEEKQKQVVVEKVGEPTQSYEDFAASLPADECRYAIYDFDFVTKENCQKSRIFFIAWS 145
           FKIEEKQKQVVVEKVGEPTQSYEDFAASLPADECRYAIYDFDFVT+ENCQKSRIFFIAWS
Sbjct: 96  FKIEEKQKQVVVEKVGEPTQSYEDFAASLPADECRYAIYDFDFVTEENCQKSRIFFIAWS 155

Query: 146 PDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPTEMGLDVIRSRVG 190
           PDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPTEMGLDVIRSRVG
Sbjct: 156 PDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPTEMGLDVIRSRVG 203

[Close]

BLAST of CmaCh14G001650 vs. NCBI nr
Match: XP_038905295.1 (actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905296.1 actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905297.1 actin-depolymerizing factor 2-like [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.4e-69
Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           P+DECRYAIYDFDFVT+ENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 171 LQATDPTEMGLDVIRSRVG 190
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of CmaCh14G001650 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 243.0 bits (619), Expect = 1.9e-64
Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYAIYDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 171 LQATDPTEMGLDVIRSRV 189
           LQATDPTEM LDV++SRV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138

[Close]

BLAST of CmaCh14G001650 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-63
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PADECRYAIYDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 171 LQATDPTEMGLDVIRSR 188
           LQATDPTEM LDV RSR
Sbjct: 121 LQATDPTEMDLDVFRSR 137

[Close]

BLAST of CmaCh14G001650 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 238.8 bits (608), Expect = 3.5e-63
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 50  KMANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAAS 109
           + ANAASG+AV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA 
Sbjct: 11  RSANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAAC 70

Query: 110 LPADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQV 169
           LPADECRYAIYDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QV
Sbjct: 71  LPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV 130

Query: 170 ELQATDPTEMGLDVIRSR 188
           ELQATDPTEM LDV RSR
Sbjct: 131 ELQATDPTEMDLDVFRSR 148

[Close]

BLAST of CmaCh14G001650 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 231.9 bits (590), Expect = 4.3e-61
Identity = 113/137 (82.48%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 51  MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 110
           MANAASG+AV+DDCKLKF+ELKAKRT+R IV+KIE+  KQV+VEK+GEP QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 111 PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 170
           PAD+CRY IYDFDFVT ENCQKS+IFFIAWSPD ++VR KMIYASSKDRFKRELDG QVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 171 LQATDPTEMGLDVIRSR 188
           LQATDPTEMGLDV +SR
Sbjct: 121 LQATDPTEMGLDVFKSR 135

[Close]

BLAST of CmaCh14G001650 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 230.7 bits (587), Expect = 9.6e-61
Identity = 112/131 (85.50%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 58  IAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLPADECRY 117
           +AV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASLPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 118 AIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPT 177
           AIYDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDG QVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 178 EMGLDVIRSRV 189
           EM LDV++SRV
Sbjct: 121 EMDLDVLKSRV 131

The following BLAST results are available for this feature:

BLAST of CmaCh14G001650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI1	9.7e-66	87.77	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q9FVI2	2.4e-64	87.59	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q9ZSK3	2.6e-63	86.23	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]
Q0DLA3	1.3e-62	84.67	Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P...	[more]
Q39250	1.7e-62	86.13	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]

BLAST of CmaCh14G001650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J833	4.7e-71	100.00	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482130 P...	[more]
A0A6J1F4F4	1.4e-70	99.28	actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442017...	[more]
A0A6J1L3B8	1.3e-68	95.68	actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G2E2	1.3e-68	95.68	actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0LFL5	1.7e-68	96.40	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734880 PE=3 ...	[more]

BLAST of CmaCh14G001650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983563.1	9.6e-71	100.00	actin-depolymerizing factor 2-like [Cucurbita maxima]	[more]
XP_022935027.1	2.8e-70	99.28	actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023528602.1 actin-de...	[more]
XP_023528601.1	3.7e-70	98.57	actin-depolymerizing factor 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7017313.1	6.2e-70	86.90	Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_038905295.1	1.4e-69	97.84	actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905296.1 actin-dep...	[more]

BLAST of CmaCh14G001650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59890.1	1.9e-64	86.23	actin depolymerizing factor 4	[more]
AT3G46010.1	1.2e-63	86.13	actin depolymerizing factor 1	[more]
AT3G46010.2	3.5e-63	84.78	actin depolymerizing factor 1	[more]
AT3G46000.1	4.3e-61	82.48	actin depolymerizing factor 2	[more]
AT5G59890.2	9.6e-61	85.50	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 62..189 e-value: 3.6E-60 score: 215.9
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 64..186 e-value: 7.3E-37 score: 125.9
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 55..189 score: 39.745911
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 47..189 e-value: 1.7E-53 score: 182.7
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 50..187
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 56..188 e-value: 9.52591E-70 score: 206.254
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 50..187
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..28 score: 7.0
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 51..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G001650.1	CmaCh14G001650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding