CmaCh14G001140 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G001140
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionCASP-like protein
LocationCma_Chr14: 495135 .. 497095 (+)
RNA-Seq ExpressionCmaCh14G001140
SyntenyCmaCh14G001140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGAATTACTTGAATTGGGCACAGGCTTTGGGCACTGCTTGGTGTTTCATGCTGTTGTTGGGCCTTTTGTGTTGTTGCCTCAGCACCAAGCCCCGCCATCACGGCGACACCTCCGCCTCTAATTCCAGCTGCACCTGCGACGGCGGCTATGCAGGTGTCTGATTTCACAACAATCTTTCGGATATGGATACGCCTTTTTTTCTTCTTCTTTCAATTTTCATATCAGATTCTTTTCTTTTATTTTGCTGTGATGGGGTTTTAGGTTCTTGATTATCTCTTGTACATAGAAACTGAAACTCATAGTGATCTTTTTTTTCTCTCTTTCTTTTTCTTTTTCTTTTGGTAGTTCTTTCTTGCTTAGTGGTGTAAACATCGGTATAGAATTGCTTCCGTTGATTGATTCGTTTTTGTGATTAGTGGGTTCAATTCCTGTTCAATAATTTTGTCGTTCTAAATTCATTAATTCCCAGATTGAAAATACGACTTTTGTAATCCATTCAATGCTGGGGAATTGTTTGCCTTTGTCTTAGGTAGTTTCAAAAAGGGAATTGCTGCTGACACTTTTTGGGGGCCATAAGAGTGGCTCTCGGAGCCGCGCAGCCGCTTCGAATTATTTTCTTTCTTGGAGAGATTGATTTGGCACCAACCACTTCCACCCACCCAATGCCAATGGATCCATCTCAATAGAGTTGTATTCATTCCCTTAATTAGTTATTTTTAATTTCTTTTTAAAAGGCCTGATGCCAAACACTTCTTAACGGAGACTTACCCCTTGTAATTAGCCATTTTAATTTTTTTCAAAATGTCTCATAATTGAGGCTAGGCTTCAGGAGCCCTTGTAACACGGTTTACTCAAACTCTAAAATTCTATTGATACCACTATTTTAAGCATAAAGTCTCATGATTTTACTTTAAGTTTTCTAAAAAATGCTTATGTCAATGGAGATTGTATGTCTAAACTCATGATCATTCCTTAATTAGTTAATACAAGATTTGTCTGTCCACCATCTTCAACACCATCCAAATGTCTCTACTATAACTTTGAAACATTTTGCATAGATGGATAATTTTATCGTATACTAAAATCTCACTCTTACCTATTCACACATCCATGCTTTCTTTCCACCCATCTTAATCAAATCATACACGAAACAAATCTGCCAATTTTGGCGTCCTTTCATAACCATTTACTTTTGTATATATATATTTTTTAAATTGAAATAATCATTAAATTCCTCAGTTGAAAGTTCATTAAAAATGGAATCAACCCCATTAATTTTTATTATCTTATCTAATCCCAAACCTGAAGGCTTAATGACCCAAATCCTTGAGTAAATCAAATCTGCGCTGACGGCCAGGTCAGAGGTCACATTCGTTGATTGAAATCGAAAGGTCAACAAACGAAAAGTTCAAATTCAGCGTCAAAAGTATCCATTAATTATAATAAATTGTCCAATCGGAACCACTGTTGAATGAATGAATGAATGAATGAATGGTGGGCCCACTGCGAAAACAAGATCAAACTTCAACACCTACCTAACTAATTAATATTCCACCTATATGTATATAAACGACGCCTCTCCTTCCTCAATCTGCAAGCCTTAACGGTCCTTTTGGGGTTCAAATTTTGAGTCACAGCAATGAGTTGTATTTGTTTCCGAGGCCCAAAGGAGAAGAAGAAGAAGAGCAATCAAACGCATGGCGACAAAGGTGCCCGGAAATTCAGACCTCCGCGGGGATACAGCGGAGGAACTGCAGCTGCTGGTTCCACTGCCGGAAATGGTCATTTGACTGTTTTGACTGATCATGATGGCGGTGTCGTTTTGGCGTCGACGTTTGGTTTTGCGGTTGCTGCAGCTGCGGTGGTTGATGCTGGGGAACATGGTGGAAGCTGTGGTGGTGGAGAATGCGGCGGCGCCGACGGCTGTGGTGGTGGCGGCTGCGGCGGTGGTTGA

mRNA sequence

ATGGAGAAGAATTACTTGAATTGGGCACAGGCTTTGGGCACTGCTTGGTGTTTCATGCTGTTGTTGGGCCTTTTGTGTTGTTGCCTCAGCACCAAGCCCCGCCATCACGGCGACACCTCCGCCTCTAATTCCAGCTGCACCTGCGACGGCGGCTATGCAGCAATGAGTTGTATTTGTTTCCGAGGCCCAAAGGAGAAGAAGAAGAAGAGCAATCAAACGCATGGCGACAAAGGTGCCCGGAAATTCAGACCTCCGCGGGGATACAGCGGAGGAACTGCAGCTGCTGGTTCCACTGCCGGAAATGGTCATTTGACTGTTTTGACTGATCATGATGGCGGTGTCGTTTTGGCGTCGACGTTTGGTTTTGCGGTTGCTGCAGCTGCGGTGGTTGATGCTGGGGAACATGGTGGAAGCTGTGGTGGTGGAGAATGCGGCGGCGCCGACGGCTGTGGTGGTGGCGGCTGCGGCGGTGGTTGA

Coding sequence (CDS)

ATGGAGAAGAATTACTTGAATTGGGCACAGGCTTTGGGCACTGCTTGGTGTTTCATGCTGTTGTTGGGCCTTTTGTGTTGTTGCCTCAGCACCAAGCCCCGCCATCACGGCGACACCTCCGCCTCTAATTCCAGCTGCACCTGCGACGGCGGCTATGCAGCAATGAGTTGTATTTGTTTCCGAGGCCCAAAGGAGAAGAAGAAGAAGAGCAATCAAACGCATGGCGACAAAGGTGCCCGGAAATTCAGACCTCCGCGGGGATACAGCGGAGGAACTGCAGCTGCTGGTTCCACTGCCGGAAATGGTCATTTGACTGTTTTGACTGATCATGATGGCGGTGTCGTTTTGGCGTCGACGTTTGGTTTTGCGGTTGCTGCAGCTGCGGTGGTTGATGCTGGGGAACATGGTGGAAGCTGTGGTGGTGGAGAATGCGGCGGCGCCGACGGCTGTGGTGGTGGCGGCTGCGGCGGTGGTTGA

Protein sequence

MEKNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAMSCICFRGPKEKKKKSNQTHGDKGARKFRPPRGYSGGTAAAGSTAGNGHLTVLTDHDGGVVLASTFGFAVAAAAVVDAGEHGGSCGGGECGGADGCGGGGCGGG
Homology
BLAST of CmaCh14G001140 vs. ExPASy TrEMBL
Match: A0A0A0LDL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733910 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22
Identity = 67/94 (71.28%), Postives = 72/94 (76.60%), Query Frame = 0

Query: 57  CICFRGPKEKKKKS---NQTHGDKGARKFRPPRGYSGGTAAAGSTAGNGHLTVLTD-HDG 116
           CICF G  +KKKKS   NQT G KG RKFRPPRG+ G T   GS AGNG+L VLTD HDG
Sbjct: 5   CICF-GAGQKKKKSNNNNQTDGHKGGRKFRPPRGHGGRTGVGGSGAGNGNLAVLTDHHDG 64

Query: 117 GVVLASTFGFAVAAAAVVDAGEHGGSCGGGECGG 147
           GV + +T GFAVAAAAVVD  EHGGSCGGGECGG
Sbjct: 65  GVAMVATLGFAVAAAAVVDVAEHGGSCGGGECGG 97

BLAST of CmaCh14G001140 vs. ExPASy TrEMBL
Match: A0A5D2TKA7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G172900v1 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.8e-13
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 3  KNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAM 56
          ++YLNW QA  +AW FMLL+GL+CCCLST P  HGD +++N+SC+CDGGY  +
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLICCCLSTHPTQHGDANSTNASCSCDGGYTGV 54

BLAST of CmaCh14G001140 vs. ExPASy TrEMBL
Match: A0A5D2FAC1 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A09G184900v1 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.3e-13
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 3  KNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAM 56
          ++YLNW QA  +AW FMLL+GL+CCCLST P  HGD +++N+SC+CDGGY  +
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLVCCCLSTHPTQHGDANSTNASCSCDGGYTGV 54

BLAST of CmaCh14G001140 vs. ExPASy TrEMBL
Match: A0A5D2JJD2 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G180700v1 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.3e-13
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 3  KNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAM 56
          ++YLNW QA  +AW FMLL+GL+CCCLST P  HGD +++N+SC+CDGGY  +
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLVCCCLSTHPTQHGDANSTNASCSCDGGYTGV 54

BLAST of CmaCh14G001140 vs. ExPASy TrEMBL
Match: A0A5J5Q9G1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D09G167000v1 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.3e-13
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 3  KNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAM 56
          ++YLNW QA  +AW FMLL+GL+CCCLST P  HGD +++N+SC+CDGGY  +
Sbjct: 2  EHYLNWVQAFASAWAFMLLVGLVCCCLSTHPTQHGDANSTNASCSCDGGYTGV 54

BLAST of CmaCh14G001140 vs. NCBI nr
Match: KAG6580518.1 (hypothetical protein SDJN03_20520, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.8 bits (704), Expect = 2.3e-70
Identity = 144/158 (91.14%), Postives = 146/158 (92.41%), Query Frame = 0

Query: 1   MEKNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAMSCICF 60
           MEKNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAMSCICF
Sbjct: 1   MEKNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAMSCICF 60

Query: 61  RGPKEKKKKSNQTHGDKGARKFRPPRGYSGGTAAAGSTAGNGHLTVLTDHDGGVVLASTF 120
           RGPKE +K SNQ HGD GARKFRPPRGYSGGTAAA ST GNG+LTVLTDHDGGVVLASTF
Sbjct: 61  RGPKE-EKNSNQAHGDNGARKFRPPRGYSGGTAAAASTPGNGNLTVLTDHDGGVVLASTF 120

Query: 121 GFAVAAAAVVDAGEHGGSCGGGECGGADGCGGGGCGGG 159
           GFAVAAAAVVDAGEH     GGECGGA GCGGGGCGGG
Sbjct: 121 GFAVAAAAVVDAGEH-----GGECGGAGGCGGGGCGGG 152

BLAST of CmaCh14G001140 vs. NCBI nr
Match: XP_023528737.1 (loricrin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.9 bits (450), Expect = 6.6e-41
Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 0

Query: 55  MSCICFRGPKEKKKKSNQTHGDKGARKFRPPRGYSGGTAAAGSTAGNGHLTVLTDHDGGV 114
           MSCICFRGPKE KKKSNQ HGDKGARKFRPPRGY+GGTAA GST GNG+LTVLTDHDGGV
Sbjct: 1   MSCICFRGPKE-KKKSNQAHGDKGARKFRPPRGYTGGTAAGGSTTGNGNLTVLTDHDGGV 60

Query: 115 VLASTFGFAVAAAAVVDAGEHGGSCGGGECGGADGCGGGGCGGG 159
           VLASTFGFAVAAAAVVDAGEHGGSCGGGECGGA GCGGGGCGGG
Sbjct: 61  VLASTFGFAVAAAAVVDAGEHGGSCGGGECGGAGGCGGGGCGGG 103

BLAST of CmaCh14G001140 vs. NCBI nr
Match: XP_038903553.1 (uncharacterized protein LOC120090114 [Benincasa hispida])

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-19
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0

Query: 1  MEKNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYA 54
          M+KNY NWAQAL TAWCFM+LLGLLCCCLST PRHH D+SA+NSSCTCDGGYA
Sbjct: 1  MDKNYSNWAQALATAWCFMMLLGLLCCCLSTNPRHHDDSSAANSSCTCDGGYA 53

BLAST of CmaCh14G001140 vs. NCBI nr
Match: KAG6643282.1 (hypothetical protein CIPAW_09G199500 [Carya illinoinensis] >KAG6697467.1 hypothetical protein I3842_09G201100 [Carya illinoinensis])

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-13
Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 0

Query: 1  MEKNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAM 56
          M  +YLNWAQAL +AW FMLL+GL+CCCLST PR HG  S+ N SC+CDGG+A +
Sbjct: 1  MGHHYLNWAQALASAWGFMLLVGLMCCCLSTTPRQHGSISSGNDSCSCDGGHACV 55

BLAST of CmaCh14G001140 vs. NCBI nr
Match: KAG2690661.1 (hypothetical protein I3760_09G198800 [Carya illinoinensis] >KAG7964899.1 hypothetical protein I3843_09G195300 [Carya illinoinensis])

HSP 1 Score: 84.7 bits (208), Expect = 7.7e-13
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0

Query: 1  MEKNYLNWAQALGTAWCFMLLLGLLCCCLSTKPRHHGDTSASNSSCTCDGGYAAM 56
          M  +YLNWAQAL +AW F+LL+GL+CCCLST PR HG  S+ N SC+CDGG+A +
Sbjct: 1  MGHHYLNWAQALASAWGFVLLVGLMCCCLSTTPRQHGSISSGNDSCSCDGGHACV 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LDL81.5e-2271.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733910 PE=4 SV=1[more]
A0A5D2TKA74.8e-1360.38Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G172900v1 P... [more]
A0A5D2FAC16.3e-1360.38Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A09G184900v1 PE=... [more]
A0A5D2JJD26.3e-1360.38Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G180700v1 P... [more]
A0A5J5Q9G16.3e-1360.38Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D09G167000v1 PE... [more]
Match NameE-valueIdentityDescription
KAG6580518.12.3e-7091.14hypothetical protein SDJN03_20520, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023528737.16.6e-4193.27loricrin-like [Cucurbita pepo subsp. pepo][more]
XP_038903553.11.4e-1984.91uncharacterized protein LOC120090114 [Benincasa hispida][more]
KAG6643282.12.6e-1365.45hypothetical protein CIPAW_09G199500 [Carya illinoinensis] >KAG6697467.1 hypothe... [more]
KAG2690661.17.7e-1363.64hypothetical protein I3760_09G198800 [Carya illinoinensis] >KAG7964899.1 hypothe... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G001140.1CmaCh14G001140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane