CmaCh14G000830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G000830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor DIVARICATA-like
Location	Cma_Chr14: 383386 .. 386846 (-)
RNA-Seq Expression	CmaCh14G000830
Synteny	CmaCh14G000830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGAGGAATTGGGATTCTGTCTCCAGCCATCTCCCTTAAGTGGACCACGGAGGACAACAAACGGTTCGAAAACGCTTTGGCTTTGTTCGATAGAGATACACCTGACCGGTGGATGAATTTCGCCGCCATGATGCCCGGAAAAATCGTCGGCGATGTAATGAAACAGTACAGAGAGTTGGTGGAGGACGTGAGTGATATTGAAGCAGCGCTTATTCCGATCACGGGATATGCCGTCAGCAACTTTTTTGGGCCTTACTTTGAGTTGACATCAAGTATCAGTGAGGCTTCCTGCATTTTTTAAATATCATTTTAAAACGAATATCTAAACCAACCAAGTTTGGGCTGAGTATTAGTTAGTCTGAAATTTGAACATGGGCCTGGGCTTGGTGTGGAGTTTGTTGTGACTGTCGATGTATTGTCATCGGGAGAGAAGTTCCTTTTCATGTCTAACTAACATGAGATATCACCTATCTCACAATCTACACCTTGTGAGCTAATTTAGTTTAATTTAGTCGATGTCGATTGAGATATCACTATCGACATAAACACAGGAAACGTGCCCAACATAATCATTATCCGAGACTTTGAACCAACATAGAGGGGGAAGACTTTTGAGGTTTAAATGACGATGAAAATTGTTGAGATATGATTCAAAGTATTAAAAAAGATATGATTCAGAGTAGTTGAGATATGATTCAAATATTCAAACTACCAAGATTTTAAGAGATTGTTAGTAGATTTGAATTTTTCTCGATTTCGATGATTTACTATTTCTGGTCCAGTGTATAAGTTATAAATACGTTAATTGTGTAACCCTCTAAGCATCAAGTCAGTAGACAATAATAAAGCATGCAGCATTCATCTATTCTATCTATTCTTATCTCTTTCACTATCCCTTTTTCCAACAATTTTGGTAACAGAGCCAAGTTCGTTCGACACGAGGGCGAGTAATTATTTTCTTTCACAAAACAAAAATGGCAGTAGCTGACTTTTCTTCCTCTGCACCGTTGTTACCGATCTTTAATGGTGAGAAATATGAGTGGTGGAGCATCAAGATGAAGACCTTGCTCAGATCGCAGGAGCTATGGGACTTGGTGGAGGACGGGTTTGTTGATCTATTAGAACCCATAATAGAAGAAAAGGAGAAAATGAGAGACTAAGAGGAAAAAAAAAAAAACGATGCCAAGGCTTTATTCATTATTCAGCAAGCAATTCATGAGACTATCTTCTCACGAATTGCAGCATCAACCACATCAAAGCAGACATGGTCAATTCTACAGAAGGAGTTTCTAGGAGATTCAAAGGTCATGACAATGAAATTGCAATCTCTAAGACGTGATTTTGAAACTCTACTCATGACGAATAGCGAATCAATTGCTGATTTTTTGTCAAGAGCAATGGCAATAGTCAGTCAGATGCGTACCTATGGAGAGAAAATTTCAAACGAAACAATTGTTGCAAAGGTGTTAGAAGCTTGACTCCAAAGTTTGACCATGTGGTGGTTGCCATAGAAGAAGCTAAGGATCTATCCATACTCTCATTTGATGAATTGATGGGCTTGCTTCATACCCATGAGGCAAGAATCAATAGAGCATCAGAAAGGAACGAAGAAAAGGCACTACAGGTGAAGGAGACAACCAACAACGAAAGAGAAAATATTCATTTAGCAAGAGAAGTCATGGAAGAGGAGGATTTCGCAGCTTCCATGGTGGTCGTGATAACAGGGGTAGATGGAGAAGTGATGGACAGAGACAATTCAATGAATACAATGTTACCATTGCAGAAAGTATGGGCACACAAAATCTGATTGTTGGTATAAAAATCAACAAATGAATTTTGCAGCAAAGAATGAAGAAGAAGAAGAAGAAGAAAAGCTGCTTATGGCGTGCATGGATACTAATCCAAAAAAGGGTGACTTATGGTTTGTTGGTAGCGGATGCTCGAACCATATGACAGGCACCAAATCTTTATTCAAAGAGCTTGATGAGACGCAAAAAATTAAGGTGCAACTTGGAAACACAAATGAGATGCAAGTTGAGGGAGAAGGTACAGTGAAAGTTGAAACCAGTGGTAAGATAAAACAATTAGATAATGTTCAATTTGTACCTGATTTAGGATAAAAATTTATTGAGTGTTGGACTAAAACAATTAGATAATGTTCAATTTGTACCTGATTTAGGATAAAAATTTATTGAGTGTTGGACAATTGATGACCAGAGGACATTCAGTTCTATTTGATGACAACACATGTGTCATTACACATAAGAAATCAGGTCATAAAGTTCAAATTGTCATAGACTTCAAATAAGATGTTTCCACCTGATATTTCTAACATGAAGGATTTTGCTCTTGCTGCTAGTACGAAAGATGACTCAACATTATGACATCTCAGATATAGACATCTTCATATGACTCAACATTGTCTAGAACTAATTCATGCTGATTTATGTGGGCCAATGCAAACGAAGTCCTTGGGTGGGAGTATATATTTTTTACTATTCATTGATGATTATAGTCGCATGAGCTGGGTTTACTTCCTCCAACATAAGTCAGAGACAGAGGTGCCGAGTTCATATCTAAAGAGTTCAATCTGTTTTGTGAAGAAGAGGGCATCCAAAGGGAATTAACAGCTCCCTACACTCCAAAACAAAATGGAATCGCTGAACGAAAAAATCGAACTATTGTGGAGATGGTAAGAAGTATGTTACAAGCAAGGAGACTTCCAAACCAATTTTGGCAGAAGCCGTAGCAACATTTGTTTATCTATTAAACATCTCACCAACAAAGGCGGTTATGAATCGAACTCCTTATGAAGCATGGCATGGAAGAAAACCATATGTAAGTCATTTACGAATCTTTGCTTGTGTTGCTTATGCTTTGAAACATCCTCAAATTCGTCAAAAGCTTGATGAAGAATCTGAAAAATGCGGTTTCAAAAGCTCTGTATTTGTACTTGACATCTGCAACTTTGAATAAGGGGAAGTGTTAAGATATGATTCAAAGTATTCAAAAAGATATGATTCAGAGTAGTTGAGATATGATTCAAATATTCAAACTACCAAGATCTTAGGAGATTGTTAGTAGATTTGAATTTTTCTAGATTTCGATGATTTACTATTTATGGTCCAGTGTATAAGCTATAAATACGGGAATTGTATAACCCTCTAAGCATCAAGTCAGTAGACAATAATAAAGTAGTGCACCATTCATCTATTCTATCTATTCTATCTATTCTTATCTCTTTCACTACCCCTTTTTCGAACGGAATGTCATTTACTCCCACAAAACCTTATCCAATATATCATGCTAAAATGGATAAGGTTTGCTGGTTTTTCTGCTCATCCCCATCTCTTATTGTCAGGATTGTCTTTGATACTTCTTCTTCTTCTTCTTCTTCTTGTTCCTCAGATCCCCATGGCTGCATTTCTTCCTTTCCAAACTTCAGGGTTCCCTTAG

mRNA sequence

ATGAAACGAGGAATTGGGATTCTGTCTCCAGCCATCTCCCTTAAGTGGACCACGGAGGACAACAAACGGTTCGAAAACGCTTTGGCTTTGTTCGATAGAGATACACCTGACCGGTGGATGAATTTCGCCGCCATGATGCCCGGAAAAATCGTCGGCGATGTAATGAAACAGTACAGAGAGTTGGTGGAGGACGTGAGTGATATTGAAGCAGCGCTTATTCCGATCACGGGATATGCCATCCCCATGGCTGCATTTCTTCCTTTCCAAACTTCAGGGTTCCCTTAG

Coding sequence (CDS)

ATGAAACGAGGAATTGGGATTCTGTCTCCAGCCATCTCCCTTAAGTGGACCACGGAGGACAACAAACGGTTCGAAAACGCTTTGGCTTTGTTCGATAGAGATACACCTGACCGGTGGATGAATTTCGCCGCCATGATGCCCGGAAAAATCGTCGGCGATGTAATGAAACAGTACAGAGAGTTGGTGGAGGACGTGAGTGATATTGAAGCAGCGCTTATTCCGATCACGGGATATGCCATCCCCATGGCTGCATTTCTTCCTTTCCAAACTTCAGGGTTCCCTTAG

Protein sequence

MKRGIGILSPAISLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSDIEAALIPITGYAIPMAAFLPFQTSGFP

Homology

[Close]

BLAST of CmaCh14G000830 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 8.3e-18
Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 15 KWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSDIEAALIP 74
          +WT  +NK FENALA+FD +TP+RW   A  +PGK VGDVM+QY+EL +DVS IEA  +P
Sbjct: 25 RWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAGFVP 84

Query: 75 ITGYA 80
          + GY+
Sbjct: 85 VPGYS 89

[Close]

BLAST of CmaCh14G000830 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.8e-12
Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 9  SPAISLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSDI 68
          S + S  WT++ NK FE ALA++D+DTPDRW N A  +  K   +V + Y  LVED+ +I
Sbjct: 5  SMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNI 64

Query: 69 EAALIPITGY 79
          E  L+P+  Y
Sbjct: 65 EQDLVPLPKY 74

[Close]

BLAST of CmaCh14G000830 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-11
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 9  SPAISLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSDI 68
          S + S  WT ++NK FE ALA +D+DTPDRW N A  + GK   +V + Y  L+ DV+DI
Sbjct: 5  SMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDI 64

Query: 69 EAALIPITGY 79
          E+   P   Y
Sbjct: 65 ESGRYPHPNY 74

[Close]

BLAST of CmaCh14G000830 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-11
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 16 WTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSDIEAALIPI 75
          WT   NK FE ALA++D+DTPDRW N A  + GK V +V + Y  LVED+ +IE   +P+
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 76 TGY 79
            Y
Sbjct: 72 PNY 74

[Close]

BLAST of CmaCh14G000830 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-11
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 16 WTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSDIEAALIPI 75
          W+ ++NK FE ALA++D+DTPDRW N A  + G+   +V K Y  LVED+  IE+  +P 
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70

Query: 76 TGY 79
            Y
Sbjct: 71 PNY 73

[Close]

BLAST of CmaCh14G000830 vs. ExPASy TrEMBL
Match: A0A5A7TKX4 (Transcription factor DIVARICATA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001010 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 66/98 (67.35%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 1  MKRGIGILSPAISL------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDV 60
          MKRGIGILSPA  L      KWT E+NKRFENALALFDRDTPDRW+  AAM+PGK VGDV
Sbjct: 1  MKRGIGILSPATYLRNSGCSKWTPEENKRFENALALFDRDTPDRWVKVAAMIPGKTVGDV 60

Query: 61 MKQYRELVEDVSDIEAALIPITGYAIPMAAFLPFQTSG 93
          +KQYRELVEDVSDIEA L+P+ GY +  +  L +   G
Sbjct: 61 VKQYRELVEDVSDIEAGLVPVPGYGVGNSFVLEWSNDG 98

[Close]

BLAST of CmaCh14G000830 vs. ExPASy TrEMBL
Match: A0A1S3B587 (transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103486321 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 66/98 (67.35%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 1  MKRGIGILSPAISL------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDV 60
          MKRGIGILSPA  L      KWT E+NKRFENALALFDRDTPDRW+  AAM+PGK VGDV
Sbjct: 1  MKRGIGILSPATYLRNSGCSKWTPEENKRFENALALFDRDTPDRWVKVAAMIPGKTVGDV 60

Query: 61 MKQYRELVEDVSDIEAALIPITGYAIPMAAFLPFQTSG 93
          +KQYRELVEDVSDIEA L+P+ GY +  +  L +   G
Sbjct: 61 VKQYRELVEDVSDIEAGLVPVPGYGVGNSFVLEWSNDG 98

[Close]

BLAST of CmaCh14G000830 vs. ExPASy TrEMBL
Match: A0A6J1CWZ0 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111015054 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.1e-28
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1  MKRGIGILSPAISLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRE 60
          MKRGIGI SP    KWT E+NKRFENALA FDRDTPDRW+  AAM+PGK VGDV+KQYR+
Sbjct: 1  MKRGIGIFSPTSPAKWTPEENKRFENALAWFDRDTPDRWLKVAAMIPGKTVGDVIKQYRD 60

Query: 61 LVEDVSDIEAALIPITGYA 80
          LVEDVSDIEA LIPI GYA
Sbjct: 61 LVEDVSDIEAGLIPIPGYA 79

[Close]

BLAST of CmaCh14G000830 vs. ExPASy TrEMBL
Match: A0A0A0L9Y9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732480 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-26
Identity = 64/98 (65.31%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MKRGIGILSPAISL------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDV 60
          MKRGIGILSPA  L      KWT E+NKRFENALALFD DTPDRW+  AAM+PGK V DV
Sbjct: 1  MKRGIGILSPATYLRNSGCSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVCDV 60

Query: 61 MKQYRELVEDVSDIEAALIPITGYAIPMAAFLPFQTSG 93
          +KQYRELVEDVSDIEA L+P+ GY +  +  L + + G
Sbjct: 61 VKQYRELVEDVSDIEAGLVPVPGYGVGNSFVLEWSSDG 98

[Close]

BLAST of CmaCh14G000830 vs. ExPASy TrEMBL
Match: W9SDH4 (Transcription factor OS=Morus notabilis OX=981085 GN=L484_015600 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.3e-25
Identity = 62/92 (67.39%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MKRGIGILSPAISL-------------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMP 60
          M RGIGILSPA  L             KWT E+NK+FENALAL+D+DTPDRW+  AAM+P
Sbjct: 1  MYRGIGILSPATYLEKSNWLFQESREAKWTAEENKQFENALALYDKDTPDRWVKVAAMIP 60

Query: 61 GKIVGDVMKQYRELVEDVSDIEAALIPITGYA 80
          GK VGDVMKQYREL EDVSDIEA LIPI GY+
Sbjct: 61 GKTVGDVMKQYRELEEDVSDIEAGLIPIPGYS 92

[Close]

BLAST of CmaCh14G000830 vs. NCBI nr
Match: XP_008442463.1 (PREDICTED: transcription factor DIVARICATA-like [Cucumis melo] >KAA0044153.1 transcription factor DIVARICATA-like [Cucumis melo var. makuwa] >TYK24984.1 transcription factor DIVARICATA-like [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 5.0e-28
Identity = 66/98 (67.35%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 1  MKRGIGILSPAISL------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDV 60
          MKRGIGILSPA  L      KWT E+NKRFENALALFDRDTPDRW+  AAM+PGK VGDV
Sbjct: 1  MKRGIGILSPATYLRNSGCSKWTPEENKRFENALALFDRDTPDRWVKVAAMIPGKTVGDV 60

Query: 61 MKQYRELVEDVSDIEAALIPITGYAIPMAAFLPFQTSG 93
          +KQYRELVEDVSDIEA L+P+ GY +  +  L +   G
Sbjct: 61 VKQYRELVEDVSDIEAGLVPVPGYGVGNSFVLEWSNDG 98

[Close]

BLAST of CmaCh14G000830 vs. NCBI nr
Match: XP_022145656.1 (transcription factor DIVARICATA-like [Momordica charantia])

HSP 1 Score: 132.9 bits (333), Expect = 1.5e-27
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1  MKRGIGILSPAISLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRE 60
          MKRGIGI SP    KWT E+NKRFENALA FDRDTPDRW+  AAM+PGK VGDV+KQYR+
Sbjct: 1  MKRGIGIFSPTSPAKWTPEENKRFENALAWFDRDTPDRWLKVAAMIPGKTVGDVIKQYRD 60

Query: 61 LVEDVSDIEAALIPITGYA 80
          LVEDVSDIEA LIPI GYA
Sbjct: 61 LVEDVSDIEAGLIPIPGYA 79

[Close]

BLAST of CmaCh14G000830 vs. NCBI nr
Match: XP_038906337.1 (transcription factor DIVARICATA-like [Benincasa hispida])

HSP 1 Score: 131.7 bits (330), Expect = 3.2e-27
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1  MKRGIGILSPAISL------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDV 60
          MKRGIGILSPA  L      KWT E+NKRFENALALFDRDTPDRW+  AAM+PGK VGDV
Sbjct: 1  MKRGIGILSPATYLRNSGWSKWTPEENKRFENALALFDRDTPDRWLKVAAMIPGKTVGDV 60

Query: 61 MKQYRELVEDVSDIEAALIPITGYAI 81
          +KQYRELVEDVSDIEA  IPI GY +
Sbjct: 61 VKQYRELVEDVSDIEAGRIPIPGYTV 86

[Close]

BLAST of CmaCh14G000830 vs. NCBI nr
Match: XP_004137732.1 (transcription factor DIVARICATA [Cucumis sativus] >KGN58790.1 hypothetical protein Csa_002630 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 3.6e-26
Identity = 64/98 (65.31%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MKRGIGILSPAISL------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDV 60
          MKRGIGILSPA  L      KWT E+NKRFENALALFD DTPDRW+  AAM+PGK V DV
Sbjct: 1  MKRGIGILSPATYLRNSGCSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVCDV 60

Query: 61 MKQYRELVEDVSDIEAALIPITGYAIPMAAFLPFQTSG 93
          +KQYRELVEDVSDIEA L+P+ GY +  +  L + + G
Sbjct: 61 VKQYRELVEDVSDIEAGLVPVPGYGVGNSFVLEWSSDG 98

[Close]

BLAST of CmaCh14G000830 vs. NCBI nr
Match: XP_010109645.1 (transcription factor DIVARICATA [Morus notabilis] >EXC23690.1 Transcription factor [Morus notabilis])

HSP 1 Score: 123.6 bits (309), Expect = 8.9e-25
Identity = 62/92 (67.39%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MKRGIGILSPAISL-------------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMP 60
          M RGIGILSPA  L             KWT E+NK+FENALAL+D+DTPDRW+  AAM+P
Sbjct: 1  MYRGIGILSPATYLEKSNWLFQESREAKWTAEENKQFENALALYDKDTPDRWVKVAAMIP 60

Query: 61 GKIVGDVMKQYRELVEDVSDIEAALIPITGYA 80
          GK VGDVMKQYREL EDVSDIEA LIPI GY+
Sbjct: 61 GKTVGDVMKQYRELEEDVSDIEAGLIPIPGYS 92

[Close]

BLAST of CmaCh14G000830 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 3.5e-27
Identity = 58/92 (63.04%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 1  MKRGIGILSPAISL-------------KWTTEDNKRFENALALFDRDTPDRWMNFAAMMP 60
          M RGI ++SPA  L             KWT E+NK+FENALA +D+DTPDRW   AAM+P
Sbjct: 1  MNRGIEVMSPATYLETSNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLP 60

Query: 61 GKIVGDVMKQYRELVEDVSDIEAALIPITGYA 80
          GK VGDV+KQYREL EDVSDIEA LIPI GYA
Sbjct: 61 GKTVGDVIKQYRELEEDVSDIEAGLIPIPGYA 92

[Close]

BLAST of CmaCh14G000830 vs. TAIR 10
Match: AT5G05790.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 2.7e-19
Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 13 SLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSDIEAAL 72
          S  WT E+NK+FE ALA++  DTPDRW   AAM+PGK + DVM+QY +L ED+ DIEA L
Sbjct: 28 SSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGL 87

Query: 73 IPITGY 79
          +PI GY
Sbjct: 88 VPIPGY 93

[Close]

BLAST of CmaCh14G000830 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-18
Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 6  GILSPAISLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDV 65
          G+ +      WT  +NK FENALA++D +TPDRW   AA++PGK V DV++QY +L  DV
Sbjct: 24 GVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADV 83

Query: 66 SDIEAALIPITGY 79
          S IEA LIP+ GY
Sbjct: 84 SSIEAGLIPVPGY 96

[Close]

BLAST of CmaCh14G000830 vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 2.9e-18
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 8  LSPAISLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSD 67
          L  + S  WT E+NK FE ALA++  D+PDRW   A+M+PGK V DVMKQY +L EDV D
Sbjct: 25 LHSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFD 84

Query: 68 IEAALIPITGY 79
          IEA  +PI GY
Sbjct: 85 IEAGRVPIPGY 95

[Close]

BLAST of CmaCh14G000830 vs. TAIR 10
Match: AT3G11280.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 2.9e-18
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 8  LSPAISLKWTTEDNKRFENALALFDRDTPDRWMNFAAMMPGKIVGDVMKQYRELVEDVSD 67
          L  + S  WT E+NK FE ALA++  D+PDRW   A+M+PGK V DVMKQY +L EDV D
Sbjct: 25 LHSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFD 84

Query: 68 IEAALIPITGY 79
          IEA  +PI GY
Sbjct: 85 IEAGRVPIPGY 95

The following BLAST results are available for this feature:

BLAST of CmaCh14G000830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9H7	8.3e-18	58.46	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q8GW75	6.8e-12	45.71	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]
Q6NNN0	1.2e-11	45.71	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
Q1A173	1.2e-11	49.21	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q58FS3	2.0e-11	46.03	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]

BLAST of CmaCh14G000830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKX4	2.4e-28	67.35	Transcription factor DIVARICATA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3B587	2.4e-28	67.35	transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103486321 PE=...	[more]
A0A6J1CWZ0	7.1e-28	78.48	transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A0A0L9Y9	1.7e-26	65.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732480 PE=4 SV=1	[more]
W9SDH4	4.3e-25	67.39	Transcription factor OS=Morus notabilis OX=981085 GN=L484_015600 PE=4 SV=1	[more]

BLAST of CmaCh14G000830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442463.1	5.0e-28	67.35	PREDICTED: transcription factor DIVARICATA-like [Cucumis melo] >KAA0044153.1 tra...	[more]
XP_022145656.1	1.5e-27	78.48	transcription factor DIVARICATA-like [Momordica charantia]	[more]
XP_038906337.1	3.2e-27	75.58	transcription factor DIVARICATA-like [Benincasa hispida]	[more]
XP_004137732.1	3.6e-26	65.31	transcription factor DIVARICATA [Cucumis sativus] >KGN58790.1 hypothetical prote...	[more]
XP_010109645.1	8.9e-25	67.39	transcription factor DIVARICATA [Morus notabilis] >EXC23690.1 Transcription fact...	[more]

BLAST of CmaCh14G000830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38090.1	3.5e-27	63.04	Duplicated homeodomain-like superfamily protein	[more]
AT5G05790.1	2.7e-19	60.61	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	1.0e-18	53.42	Homeodomain-like transcriptional regulator	[more]
AT3G11280.1	2.9e-18	57.75	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.2	2.9e-18	57.75	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 13..75 e-value: 8.5E-17 score: 62.7
None	No IPR available	PANTHER	PTHR44042:SF50	TRANSCRIPTION FACTOR DIVARICATA	coord: 12..84
IPR043363	Transcription factor DIVARICATA-like	PANTHER	PTHR44042	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 12..84
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 15..62 e-value: 5.46195E-4 score: 32.9326
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G000830.1	CmaCh14G000830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding