CmaCh13G009830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G009830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein YLS3-like
Location	Cma_Chr13: 7635268 .. 7636169 (+)
RNA-Seq Expression	CmaCh13G009830
Synteny	CmaCh13G009830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCTAATTTCCCCTCTACGATCACAACATTTTCGTCAATCCAATAAAGAAAGCAGACCTTCATCCTACCGGAAATAATGGCGTCGTCGAGATTCTTCGCATTCCTCCTCTTGATTTCTTCTCAGATGTTCGTCGGATTCTCTCAAGATCTCAGCGAATTTCTCAAAGGAACGGAATCGATTCTCGACCGCCAACTTCCGCCGTGTATGAGGCAGATGCTTTCGTGTCAACCGTACATCAAGTCGCCGGAAAATCCGCCGACGGCGTGCTGTACGCCCTTAAAGGAGTTGCTGAATTCCGATCTTCCGTGCCTATGCTCCTTCTTCAACAATGAGAAAATGCTAAATACTCTGAATGTCTCGCAGAGCCGAGCCTTGGAGCTTCCTAAGAATTGCGGAGCCGAGCTCGATATCTCCGGCTGCAGCCATGGTGAACTTCCATTTCTCCCCTGATTTAATTCTCTGAATCCGATTTCCATTTCTCTTAAATTTACGCCAAATTTTCAGCTGAGTCGCCAACCGGCTCAACCGAAGGACCTTCTTCATCAACTACTCCTTCTCCGACCGCCAACACTTCCGGTTTGAATGGTAAATTTCTGTTGATTTTTCTTTTCTTTGCTTAAATTATTGGTTAATTTAGAGTGTTTTCGATTAATCAAAATGTTTGTAAATTAAATTCAATTCAATTCAGATTCTTCTACCGGCGGCGCAACCAGGAACAATCCAACTTACGGAATTGGCCATGGCGTCGCCGCCGCTTCCTCAGTCGTGGCTTTGCTCCTTTCAGCATTCTAGGTCTTCTTGTTCATTTTAATTTATAATTTATTCCATCTTTATTTTTTATCCAACATTTTTTGCAATTTGGTCCCTATCTAAAAAATATTTTCCTTTTGGTACCACAC

mRNA sequence

CCCCCTAATTTCCCCTCTACGATCACAACATTTTCGTCAATCCAATAAAGAAAGCAGACCTTCATCCTACCGGAAATAATGGCGTCGTCGAGATTCTTCGCATTCCTCCTCTTGATTTCTTCTCAGATGTTCGTCGGATTCTCTCAAGATCTCAGCGAATTTCTCAAAGGAACGGAATCGATTCTCGACCGCCAACTTCCGCCGTGTATGAGGCAGATGCTTTCGTGTCAACCGTACATCAAGTCGCCGGAAAATCCGCCGACGGCGTGCTGTACGCCCTTAAAGGAGTTGCTGAATTCCGATCTTCCGTGCCTATGCTCCTTCTTCAACAATGAGAAAATGCTAAATACTCTGAATGTCTCGCAGAGCCGAGCCTTGGAGCTTCCTAAGAATTGCGGAGCCGAGCTCGATATCTCCGGCTGCAGCCATGCTGAGTCGCCAACCGGCTCAACCGAAGGACCTTCTTCATCAACTACTCCTTCTCCGACCGCCAACACTTCCGGTTTGAATGATTCTTCTACCGGCGGCGCAACCAGGAACAATCCAACTTACGGAATTGGCCATGGCGTCGCCGCCGCTTCCTCAGTCGTGGCTTTGCTCCTTTCAGCATTCTAGGTCTTCTTGTTCATTTTAATTTATAATTTATTCCATCTTTATTTTTTATCCAACATTTTTTGCAATTTGGTCCCTATCTAAAAAATATTTTCCTTTTGGTACCACAC

Coding sequence (CDS)

ATGGCGTCGTCGAGATTCTTCGCATTCCTCCTCTTGATTTCTTCTCAGATGTTCGTCGGATTCTCTCAAGATCTCAGCGAATTTCTCAAAGGAACGGAATCGATTCTCGACCGCCAACTTCCGCCGTGTATGAGGCAGATGCTTTCGTGTCAACCGTACATCAAGTCGCCGGAAAATCCGCCGACGGCGTGCTGTACGCCCTTAAAGGAGTTGCTGAATTCCGATCTTCCGTGCCTATGCTCCTTCTTCAACAATGAGAAAATGCTAAATACTCTGAATGTCTCGCAGAGCCGAGCCTTGGAGCTTCCTAAGAATTGCGGAGCCGAGCTCGATATCTCCGGCTGCAGCCATGCTGAGTCGCCAACCGGCTCAACCGAAGGACCTTCTTCATCAACTACTCCTTCTCCGACCGCCAACACTTCCGGTTTGAATGATTCTTCTACCGGCGGCGCAACCAGGAACAATCCAACTTACGGAATTGGCCATGGCGTCGCCGCCGCTTCCTCAGTCGTGGCTTTGCTCCTTTCAGCATTCTAG

Protein sequence

MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAESPTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF

Homology

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BLAST of CmaCh13G009830 vs. ExPASy Swiss-Prot
Match: Q9LE56 (Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=3702 GN=LTPG3 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.4e-19
Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 42  PCMRQMLSCQPYIKSPENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALE 101
           PC+++++ CQPY+     PP  CC PL E++  D  CLC+ FNN  ML +LN+++  AL+
Sbjct: 40  PCIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALD 99

Query: 102 LPKNCGAELDISGCSHAESPTGSTEGPSSSTTPSPTANTSGLNDSSTGGA-------TRN 161
           LPK CGA+ D+S C  +     S+  P++  TP  ++ ++G    STG A       T +
Sbjct: 100 LPKACGAKADVSLCKTSAGTNSSSTPPATPKTPPASSTSTGTGSGSTGNAAPSTAKPTSS 159

Query: 162 NPTYGIGHGVAAASSVVALL 175
            P    G G++ AS+VVA L
Sbjct: 160 APAINFG-GLSFASAVVATL 178

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BLAST of CmaCh13G009830 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-17
Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 39  QLPPCMRQMLSCQPYIKS-PENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQS 98
           QL  C++++L CQPYI S    PP +CC P+KE++  D PCLC  FNN ++L  LN+++ 
Sbjct: 29  QLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKDAPCLCIAFNNPEVLKALNLTKE 88

Query: 99  RALELPKNCGAELDISGCSHAESPT-----GSTEGPSSSTTPS 136
            AL LPK CG   D+S CS   +P+     GST G SS++T S
Sbjct: 89  NALLLPKACGVNPDVSLCSKIATPSPIASPGSTNGTSSASTIS 131

[Close]

BLAST of CmaCh13G009830 vs. ExPASy Swiss-Prot
Match: B3H587 (Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=3702 GN=LTPG8 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-08
Identity = 33/106 (31.13%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 38  RQLPPCMRQMLSCQPYIKSPENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQS 97
           +Q   C+ +++ CQPYI     PP  CC P+K++   D+ CLC+ F +  +L  L +++ 
Sbjct: 30  QQAMRCVAKLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKE 89

Query: 98  RALELPKNCGAELDISGC--SHAESPTGSTEGPSSSTTPSPTANTS 142
            A+++  +CG   D S C  ++  SP    E  +S  + S   NT+
Sbjct: 90  NAIKILDSCGINHDPSVCNKTNPSSPAALPEAATSGNSFSTKKNTA 135

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BLAST of CmaCh13G009830 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 47  MLSCQPYIKSPENPPTA-CCTPLKELLNSDLPCLCSFF--NNEKMLNTLNVSQSRALELP 106
           M +C PY++     PT  CC+ LK++LNS+  CLC      N+  L  L ++ S AL LP
Sbjct: 42  MATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDLG-LQINVSLALALP 101

Query: 107 KNCGAELDISGC 116
             C A  D++ C
Sbjct: 102 SVCHAAADVTKC 112

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BLAST of CmaCh13G009830 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 46/134 (34.33%), Postives = 61/134 (45.52%), Query Frame = 0


Query: 47  MLSCQPYIKSPENPPTA-CCTPLKELLNSDLPCLCSFF--NNEKMLNTLNVSQSRALELP 106
           M +C PY++     PT  CC+ LK+++NSD+ CLC      N+  L  L V+ S AL LP
Sbjct: 43  MATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDLG-LQVNVSLALALP 102

Query: 107 KNCGAELDISGCS--------------------------HAESPTGSTEGPSS-STTPSP 150
             C A  DI+ C                            A +PTGS   P+S S+TP  
Sbjct: 103 SVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNETVSASAPTGSASEPTSMSSTPGS 162

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BLAST of CmaCh13G009830 vs. ExPASy TrEMBL
Match: A0A6J1KJP7 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111495840 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60
           MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP
Sbjct: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60

Query: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES 120
           PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES
Sbjct: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES 120

Query: 121 PTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 179
           PTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF
Sbjct: 121 PTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 178

[Close]

BLAST of CmaCh13G009830 vs. ExPASy TrEMBL
Match: A0A6J1E8R9 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111431672 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.5e-83
Identity = 168/179 (93.85%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60
           MASSRF AFLLLISSQMFVGFSQDLSEFLKGTESILD  LPPCMRQMLSCQPYIKSPENP
Sbjct: 1   MASSRFVAFLLLISSQMFVGFSQDLSEFLKGTESILDGNLPPCMRQMLSCQPYIKSPENP 60

Query: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES 120
           P ACCTPLKELL+SD+PCLCSFF+NEKML TLNVSQSRALELPKNCGA+LDISGCS AES
Sbjct: 61  PPACCTPLKELLDSDVPCLCSFFSNEKMLKTLNVSQSRALELPKNCGADLDISGCSDAES 120

Query: 121 PTGSTEGPSSS-TTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 179
           PTGSTEGPSSS TTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF
Sbjct: 121 PTGSTEGPSSSTTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 179

[Close]

BLAST of CmaCh13G009830 vs. ExPASy TrEMBL
Match: A0A1S3CQ75 (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.5e-34
Identity = 97/173 (56.07%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 6   FFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENPPTACC 65
           FFAFL+L+     VGFSQDL  F KG ES    ++P CM+++L CQP+IK PENP   CC
Sbjct: 8   FFAFLILLMFSS-VGFSQDLDAFFKGMES---GKIPQCMQKILPCQPFIKLPENPSAMCC 67

Query: 66  TPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCG-AELDISGCSHAESPTGS 125
            PLKE+L  D+ CLCSFFN+  ML  LNV+QS+AL+LPK CG A++DIS C     PTGS
Sbjct: 68  LPLKEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISAC--GPPPTGS 127

Query: 126 TEGPSSSTTPSPTANTSGLNDSSTGGATR-NNPTYGIGHGVAAASSVVALLLS 177
           T+ P     P P A T+  +DS   G+ R NNP+ GIG+G AAASS VALLLS
Sbjct: 128 TDAP-----PPPPAKTA--DDSKANGSRRNNNPSKGIGYGFAAASSFVALLLS 167

[Close]

BLAST of CmaCh13G009830 vs. ExPASy TrEMBL
Match: A0A5D3BJY6 (Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002450 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 6.2e-33
Identity = 91/160 (56.88%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 19  VGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENPPTACCTPLKELLNSDLPC 78
           VGFSQDL  F KG ES    ++P CM+++L CQP+IK PENP   CC PLKE+L  D+ C
Sbjct: 5   VGFSQDLDAFFKGMES---GKIPQCMQKILPCQPFIKLPENPSAMCCLPLKEMLVGDVQC 64

Query: 79  LCSFFNNEKMLNTLNVSQSRALELPKNCG-AELDISGCSHAESPTGSTEGPSSSTTPSPT 138
           LCSFFN+  ML  LNV+QS+AL+LPK CG A++DIS C     PTGST+ P     P P 
Sbjct: 65  LCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISAC--GPPPTGSTDAP-----PPPP 124

Query: 139 ANTSGLNDSSTGGATR-NNPTYGIGHGVAAASSVVALLLS 177
           A T+  +DS   G+ R NNP+ GIG+G AAASS VALLLS
Sbjct: 125 AKTA--DDSKANGSRRNNNPSKGIGYGFAAASSFVALLLS 152

[Close]

BLAST of CmaCh13G009830 vs. ExPASy TrEMBL
Match: A0A0A0LQX5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.4e-29
Identity = 87/175 (49.71%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 6   FFAF--LLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENPPTA 65
           FFA   LL++SS   VGFS++L  F KG +     ++P CM+++L CQP+ K PE P + 
Sbjct: 8   FFAVLTLLIVSS---VGFSEELDGFFKGMDEA--TKIPQCMQKILPCQPFFKLPEIPSSI 67

Query: 66  CCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGA-ELDISGCSH-AESP 125
           CC PLKE+L  DL C CSFFN+ +ML  LN +QS+ L LPK CGA + DIS C + A+ P
Sbjct: 68  CCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPP 127

Query: 126 TGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLS 177
           TGST+ P     PSP A T+  + +++     NNP+  IG+G AAASS VALLLS
Sbjct: 128 TGSTDAP-----PSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLS 172

[Close]

BLAST of CmaCh13G009830 vs. NCBI nr
Match: XP_023001811.1 (protein YLS3-like [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60
           MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP
Sbjct: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60

Query: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES 120
           PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES
Sbjct: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES 120

Query: 121 PTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 179
           PTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF
Sbjct: 121 PTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 178

[Close]

BLAST of CmaCh13G009830 vs. NCBI nr
Match: XP_023520350.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.7 bits (818), Expect = 1.6e-83
Identity = 169/179 (94.41%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60
           MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILD +LPPCMRQML+CQPYIKSPENP
Sbjct: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDGKLPPCMRQMLTCQPYIKSPENP 60

Query: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES 120
           P ACCTPLKELL+SDLPCLCSFFNNEKML TLNVSQSRALELPKNCGAELDISGCS AES
Sbjct: 61  PPACCTPLKELLDSDLPCLCSFFNNEKMLKTLNVSQSRALELPKNCGAELDISGCSDAES 120

Query: 121 PTGSTEGPSSSTTP-SPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 179
           PTGSTEGPSSSTTP +PTANTSGLNDSSTGGATRNNPTYG GHGVAAASSVVALLLSAF
Sbjct: 121 PTGSTEGPSSSTTPLTPTANTSGLNDSSTGGATRNNPTYGFGHGVAAASSVVALLLSAF 179

[Close]

BLAST of CmaCh13G009830 vs. NCBI nr
Match: XP_022924146.1 (protein YLS3-like [Cucurbita moschata])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 168/179 (93.85%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60
           MASSRF AFLLLISSQMFVGFSQDLSEFLKGTESILD  LPPCMRQMLSCQPYIKSPENP
Sbjct: 1   MASSRFVAFLLLISSQMFVGFSQDLSEFLKGTESILDGNLPPCMRQMLSCQPYIKSPENP 60

Query: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES 120
           P ACCTPLKELL+SD+PCLCSFF+NEKML TLNVSQSRALELPKNCGA+LDISGCS AES
Sbjct: 61  PPACCTPLKELLDSDVPCLCSFFSNEKMLKTLNVSQSRALELPKNCGADLDISGCSDAES 120

Query: 121 PTGSTEGPSSS-TTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 179
           PTGSTEGPSSS TTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF
Sbjct: 121 PTGSTEGPSSSTTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 179

[Close]

BLAST of CmaCh13G009830 vs. NCBI nr
Match: KAG6584311.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019904.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81
Identity = 166/179 (92.74%), Postives = 170/179 (94.97%), Query Frame = 0


Query: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60
           MASSRF AFLLLISSQMFVGFSQDLSEFLKGTESILD  LPPCMRQML+CQPYIKSPENP
Sbjct: 1   MASSRFVAFLLLISSQMFVGFSQDLSEFLKGTESILDGNLPPCMRQMLTCQPYIKSPENP 60

Query: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCSHAES 120
           P ACCTPLKELL+SD+PCLCSFFNNEKML TLNVSQSRALELPKNCGAELDISGCS AES
Sbjct: 61  PPACCTPLKELLDSDIPCLCSFFNNEKMLKTLNVSQSRALELPKNCGAELDISGCSDAES 120

Query: 121 PTGSTEGPSSSTTPS-PTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSAF 179
           PTGSTEGPSSSTT + PTANTSGLNDSSTGGATRNNPTYGIGHGVAA SSVVALLLSAF
Sbjct: 121 PTGSTEGPSSSTTTTPPTANTSGLNDSSTGGATRNNPTYGIGHGVAATSSVVALLLSAF 179

[Close]

BLAST of CmaCh13G009830 vs. NCBI nr
Match: XP_038895529.1 (non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida] >XP_038895530.1 non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 1.4e-42
Identity = 107/180 (59.44%), Postives = 130/180 (72.22%), Query Frame = 0


Query: 1   MASSRFFAFLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPENP 60
           MAS RFFAFLLLISS++F GFSQ L  F KG +S L   +PPCM+++L CQP+IK PENP
Sbjct: 1   MASRRFFAFLLLISSRIFFGFSQHLGNFFKGMDSDL---IPPCMQKILPCQPFIKLPENP 60

Query: 61  PTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCG-AELDISGCSHAE 120
              CC PLKE+L  DLPCLCSFFNN +ML +LNV+QS+AL+LPK CG A++DIS C+H  
Sbjct: 61  LPVCCLPLKEMLAGDLPCLCSFFNNAEMLKSLNVTQSQALKLPKACGAADVDISACNHHA 120

Query: 121 SP--TGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLSA 178
            P  TGST+ P S   P  +  +S     S+  +  NNPTYGI +G AAASS VALLLSA
Sbjct: 121 GPPSTGSTDAPPSPPAPKTSDGSSPSKPDSS--SRSNNPTYGIDYGFAAASSFVALLLSA 175

[Close]

BLAST of CmaCh13G009830 vs. TAIR 10
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.6e-20
Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 42  PCMRQMLSCQPYIKSPENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALE 101
           PC+++++ CQPY+     PP  CC PL E++  D  CLC+ FNN  ML +LN+++  AL+
Sbjct: 40  PCIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALD 99

Query: 102 LPKNCGAELDISGCSHAESPTGSTEGPSSSTTPSPTANTSGLNDSSTGGA-------TRN 161
           LPK CGA+ D+S C  +     S+  P++  TP  ++ ++G    STG A       T +
Sbjct: 100 LPKACGAKADVSLCKTSAGTNSSSTPPATPKTPPASSTSTGTGSGSTGNAAPSTAKPTSS 159

Query: 162 NPTYGIGHGVAAASSVVALL 175
            P    G G++ AS+VVA L
Sbjct: 160 APAINFG-GLSFASAVVATL 178

[Close]

BLAST of CmaCh13G009830 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 5.6e-18
Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 39  QLPPCMRQMLSCQPYIKS-PENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQS 98
           QL  C++++L CQPYI S    PP +CC P+KE++  D PCLC  FNN ++L  LN+++ 
Sbjct: 29  QLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKDAPCLCIAFNNPEVLKALNLTKE 88

Query: 99  RALELPKNCGAELDISGCSHAESPT-----GSTEGPSSSTTPS 136
            AL LPK CG   D+S CS   +P+     GST G SS++T S
Sbjct: 89  NALLLPKACGVNPDVSLCSKIATPSPIASPGSTNGTSSASTIS 131

[Close]

BLAST of CmaCh13G009830 vs. TAIR 10
Match: AT1G73550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-09
Identity = 33/106 (31.13%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 38  RQLPPCMRQMLSCQPYIKSPENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQS 97
           +Q   C+ +++ CQPYI     PP  CC P+K++   D+ CLC+ F +  +L  L +++ 
Sbjct: 30  QQAMRCVAKLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKE 89

Query: 98  RALELPKNCGAELDISGC--SHAESPTGSTEGPSSSTTPSPTANTS 142
            A+++  +CG   D S C  ++  SP    E  +S  + S   NT+
Sbjct: 90  NAIKILDSCGINHDPSVCNKTNPSSPAALPEAATSGNSFSTKKNTA 135

[Close]

BLAST of CmaCh13G009830 vs. TAIR 10
Match: AT1G73550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-09
Identity = 33/107 (30.84%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 38  RQLPPCMRQMLSCQPYIKSPENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQS 97
           +Q   C+ +++ CQPYI     PP  CC P+K++   D+ CLC+ F +  +L  L +++ 
Sbjct: 30  QQAMRCVAKLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKE 89

Query: 98  RALELPKNCGAELDISGCSHAESPTGSTEGPSSSTTPSPTANTSGLN 145
            A+++  +CG   D S C+             SS    P A TSG++
Sbjct: 90  NAIKILDSCGINHDPSVCNKTN---------PSSPAALPEAATSGMH 127

[Close]

BLAST of CmaCh13G009830 vs. TAIR 10
Match: AT1G62790.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05
Identity = 35/136 (25.74%), Postives = 62/136 (45.59%), Query Frame = 0


Query: 43  CMRQMLSCQPYIKSPENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALEL 102
           C+ +++ C   + +   P   CC  +KE +  +L CLC+ + +  +L   NV+  +AL L
Sbjct: 29  CVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTSPGLLAQFNVTTEKALGL 88

Query: 103 PKNCGAELDISGCSHAESPTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGH 162
            + C    D+S C+   +P+     P     P+P  NT    D+  G           G+
Sbjct: 89  SRRCNVTTDLSACTAKGAPSPKASLP----PPAPAGNTK--KDAGAGNKL-------AGY 148

Query: 163 GVAAASSVVALLLSAF 179
           GV     +++L+ S F
Sbjct: 149 GVTTV--ILSLISSIF 149

The following BLAST results are available for this feature:

BLAST of CmaCh13G009830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE56	6.4e-19	38.57	Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=37...	[more]
Q1PFD8	7.8e-17	46.60	Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=37...	[more]
B3H587	3.9e-08	31.13	Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=37...	[more]
O64865	1.2e-04	38.89	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
O64864	1.5e-04	34.33	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CmaCh13G009830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJP7	1.1e-90	100.00	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111495840 PE=4 SV=1	[more]
A0A6J1E8R9	8.5e-83	93.85	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111431672 PE=4 SV=1	[more]
A0A1S3CQ75	2.5e-34	56.07	lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=...	[more]
A0A5D3BJY6	6.2e-33	56.88	Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0LQX5	2.4e-29	49.71	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV...	[more]

BLAST of CmaCh13G009830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001811.1	2.3e-90	100.00	protein YLS3-like [Cucurbita maxima]	[more]
XP_023520350.1	1.6e-83	94.41	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924146.1	1.8e-82	93.85	protein YLS3-like [Cucurbita moschata]	[more]
KAG6584311.1	1.9e-81	92.74	Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019904.1 Prot...	[more]
XP_038895529.1	1.4e-42	59.44	non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida] >XP_...	[more]

BLAST of CmaCh13G009830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18280.1	4.6e-20	38.57	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73560.1	5.6e-18	46.60	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73550.1	2.8e-09	31.13	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73550.2	3.6e-09	30.84	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G62790.1	1.1e-05	25.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 43..115 e-value: 1.5E-4 score: 31.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 39..115 e-value: 9.4E-16 score: 57.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 42..111 e-value: 1.6E-13 score: 52.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 42..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..154
None	No IPR available	PANTHER	PTHR33044:SF100	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 6..160
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 47..107 e-value: 2.19017E-12 score: 57.4367
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G009830.1	CmaCh13G009830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane