CmaCh13G006490 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G006490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	E3 ubiquitin-protein ligase RMA1H1-like
Location	Cma_Chr13: 6121069 .. 6121782 (+)
RNA-Seq Expression	CmaCh13G006490
Synteny	CmaCh13G006490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTTGAGCACTACTTTTCTCGTAGATGGAGGAGGTGTGTTCCAGCTTCTTCAATGGAAAATTCTGAGCAGTTTAAGGCTTGCTTTGACTGCAACATATGCTTAGAGTTTGCATCTGAGCCTATAGTTACTCTGTGTGGCCACCTCTATTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGCGACTCCCTCCTCCCTGACGAGCCTCCGCAGTGCCCAGTTTGCAAGGCTGATATCTCCCACACGACAATGGTCCCTCTCTACGGCCGTGGTCAATCTGCTAAAGAGGCCGAGGTTGATCCCAGAGGGCTGCTCATACCTCCAAGACCATCAGCTTTCGGCAACAAGGTTCTGGCATCTATCGGGTCTAATAATGCTTCTGGTGAGCAGCTTGTTTATAGAGACCTATATCAATATCAAAACGACAATTTTGATATGTATGACAGTTATGAAGAGGACTCCAGCAGCTCATTGTTTAACCTGGAAGACAACCCGGTCGGCAGTTTTGGCCATCCTACAGCCAGGATGTTTGGAGAGACGGTGTATGCTAGGTTGTTTGGAAGTTCAGAGAGCTTACATGCACACCCAAATTCTTATGCTCTAACTGGGAGTGGCAGTCCCCAGTTGAGAATACAGGAGAAGTCGCTTAACAGGATATCAATTTTTCTCTTCTGTTGCTTCGTTTTGTGCCTTGCTATATTCTAA

mRNA sequence

ATGGCCTTTGAGCACTACTTTTCTCGTAGATGGAGGAGGTGTGTTCCAGCTTCTTCAATGGAAAATTCTGAGCAGTTTAAGGCTTGCTTTGACTGCAACATATGCTTAGAGTTTGCATCTGAGCCTATAGTTACTCTGTGTGGCCACCTCTATTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGCGACTCCCTCCTCCCTGACGAGCCTCCGCAGTGCCCAGTTTGCAAGGCTGATATCTCCCACACGACAATGGTCCCTCTCTACGGCCGTGGTCAATCTGCTAAAGAGGCCGAGGTTGATCCCAGAGGGCTGCTCATACCTCCAAGACCATCAGCTTTCGGCAACAAGGTTCTGGCATCTATCGGGTCTAATAATGCTTCTGGTGAGCAGCTTGTTTATAGAGACCTATATCAATATCAAAACGACAATTTTGATATGTATGACAGTTATGAAGAGGACTCCAGCAGCTCATTGTTTAACCTGGAAGACAACCCGGTCGGCAGTTTTGGCCATCCTACAGCCAGGATGTTTGGAGAGACGGTGTATGCTAGGTTGTTTGGAAGTTCAGAGAGCTTACATGCACACCCAAATTCTTATGCTCTAACTGGGAGTGGCAGTCCCCAGTTGAGAATACAGGAGAAGTCGCTTAACAGGATATCAATTTTTCTCTTCTGTTGCTTCGTTTTGTGCCTTGCTATATTCTAA

Coding sequence (CDS)

ATGGCCTTTGAGCACTACTTTTCTCGTAGATGGAGGAGGTGTGTTCCAGCTTCTTCAATGGAAAATTCTGAGCAGTTTAAGGCTTGCTTTGACTGCAACATATGCTTAGAGTTTGCATCTGAGCCTATAGTTACTCTGTGTGGCCACCTCTATTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGCGACTCCCTCCTCCCTGACGAGCCTCCGCAGTGCCCAGTTTGCAAGGCTGATATCTCCCACACGACAATGGTCCCTCTCTACGGCCGTGGTCAATCTGCTAAAGAGGCCGAGGTTGATCCCAGAGGGCTGCTCATACCTCCAAGACCATCAGCTTTCGGCAACAAGGTTCTGGCATCTATCGGGTCTAATAATGCTTCTGGTGAGCAGCTTGTTTATAGAGACCTATATCAATATCAAAACGACAATTTTGATATGTATGACAGTTATGAAGAGGACTCCAGCAGCTCATTGTTTAACCTGGAAGACAACCCGGTCGGCAGTTTTGGCCATCCTACAGCCAGGATGTTTGGAGAGACGGTGTATGCTAGGTTGTTTGGAAGTTCAGAGAGCTTACATGCACACCCAAATTCTTATGCTCTAACTGGGAGTGGCAGTCCCCAGTTGAGAATACAGGAGAAGTCGCTTAACAGGATATCAATTTTTCTCTTCTGTTGCTTCGTTTTGTGCCTTGCTATATTCTAA

Protein sequence

MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKVLASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMFGETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF

Homology

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BLAST of CmaCh13G006490 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.4e-42
Identity = 106/235 (45.11%), Postives = 138/235 (58.72%), Query Frame = 0


Query: 21  ENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSL--LPDEPPQCPVC 80
           E  E     FDCNICL+   EP++TLCGHLYCWPCIYKW++ QS S      + PQCPVC
Sbjct: 30  EVEENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVC 89

Query: 81  KADISHTTMVPLYGR-GQSAK--EAEVDPRGLLI---PPRPSAFGNKVLASIGSNNASGE 140
           KA++S  T++PLYGR GQS K  E +    G++I   PP P   G+ +L +  SN +   
Sbjct: 90  KAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPS--- 149

Query: 141 QLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTAR-----MFGETVYAR 200
           QL+ R  YQ Q+       +Y+    SS       P+ S G  TA      M GE  YAR
Sbjct: 150 QLLQRRGYQQQSQT--RQPAYQGSYMSS-------PMLSPGGATANMLQHSMIGEVAYAR 209

Query: 201 LFG-SSESLHAHPNSYALTGSGSPQLRIQ----EKSLNRISIFLFCCFVLCLAIF 238
           +FG SS +++ +PNSY L  S SP++R Q    ++SL RI  FLFCCFV CL +F
Sbjct: 210 IFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCLILF 252

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BLAST of CmaCh13G006490 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.1e-37
Identity = 87/217 (40.09%), Postives = 125/217 (57.60%), Query Frame = 0


Query: 29  CFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLLPDE-PPQCPVCKADISHTTM 88
           CFDCNICL+ A +P+VTLCGHL+CWPCIYKWLHVQ  S+  D+    CPVCK++I+ T++
Sbjct: 41  CFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSL 100

Query: 89  VPLYGRGQSAKEA-----EVDPRGLLIP--PRPSAFGNKVLASIGSNNASGEQLVYRDLY 148
           VPLYGRG S+  +     + D     IP  P PSA  N + ++   N +   Q +    +
Sbjct: 101 VPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFH 160

Query: 149 QYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMFGETVYARLFGSSESLHAHPN 208
            +Q        +   D ++++       + SF +P   MFG+ VY R+FG+  +  A P 
Sbjct: 161 NHQYSPRGFTTTESTDLANAV-------MMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPY 220

Query: 209 SYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
                   S ++  +EKSLNR+SIF  CC +LCL +F
Sbjct: 221 Q-------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

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BLAST of CmaCh13G006490 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 87/230 (37.83%), Postives = 120/230 (52.17%), Query Frame = 0


Query: 15  VPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLLPD--EP 74
           VP+   ++S      FDCNICL+   EP+VTLCGHL+CWPCI+KWL VQS S   +    
Sbjct: 36  VPSDDTDDSN-----FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 95

Query: 75  PQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKVLASIGSNNASGE 134
            QCPVCK+ +SH+T+VPLYGRG+   + E       +P RP   G      + ++  +  
Sbjct: 96  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS---VPKRP--VGPVYRLEMPNSPYAST 155

Query: 135 QLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMFGETVYARLFGSS 194
            L       + +     Y      SS+SL         +   P   M GE V  RLFG+ 
Sbjct: 156 DLRLSQRVHFNSPQEGYYPVSGVMSSNSL------SYSAVLDPVMVMVGEMVATRLFGTR 215

Query: 195 -ESLHAHPNSYALTGSGSPQLRIQ----EKSLNRISIFLFCCFVLCLAIF 238
                A+P++Y L G+  P++R +    +KSL RI  F  CC VLCL +F
Sbjct: 216 VMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

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BLAST of CmaCh13G006490 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-26
Identity = 76/216 (35.19%), Postives = 106/216 (49.07%), Query Frame = 0


Query: 30  FDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLL-------PDEPPQCPVCKADI 89
           FDCNICL+   +P+VTLCGHL+CWPCI+KW +  ++S           EPP+CPVCK+D+
Sbjct: 19  FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDV 78

Query: 90  SHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKVLASIGSNNASGEQLVYRDLYQY 149
           S  T+VP+YGRGQ A ++     G  +P RP+      L  +G     GE   Y      
Sbjct: 79  SEATLVPIYGRGQKAPQS-----GSNVPSRPTG-PVYDLRGVGQRLGEGESQRY------ 138

Query: 150 QNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMFGETVYARLFGSSESLHAHPNSY 209
                             ++ + D        P   +  E VY RLFG S S  A    Y
Sbjct: 139 ------------------MYRMPD--------PVMGVVCEMVYRRLFGESSSNMA---PY 193

Query: 210 ALTGSGSPQLRIQ-EKSLNRISIFLFCCFVLCLAIF 238
                 S +  +Q E+SL+R+ +FL C   +CL +F
Sbjct: 199 RDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

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BLAST of CmaCh13G006490 vs. ExPASy Swiss-Prot
Match: O35445 (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-20
Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 28  ACFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLLPDEPPQCPVCKADISHTTM 87
           A F+CNICLE A E +V++CGHLYCWPC+++WL  + D        +CPVCKA IS   +
Sbjct: 23  ATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDR------QECPVCKAGISREKV 82

Query: 88  VPLYGRGQSAKEAEVDPRGLLIPPRP 114
           VPLYGRG    +   DPR L  PPRP
Sbjct: 83  VPLYGRGSQKPQ---DPR-LKTPPRP 98

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BLAST of CmaCh13G006490 vs. ExPASy TrEMBL
Match: A0A6J1KJG8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111495790 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 3.6e-137
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL
Sbjct: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV
Sbjct: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF
Sbjct: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
           GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF
Sbjct: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 237

[Close]

BLAST of CmaCh13G006490 vs. ExPASy TrEMBL
Match: A0A6J1EJS4 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111433961 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 6.6e-131
Identity = 226/237 (95.36%), Postives = 232/237 (97.89%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFSRRWRRCVPASSMENSE+FKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL
Sbjct: 1   MAFEHYFSRRWRRCVPASSMENSEKFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           H+QS SLLPDEPPQCPVCKADISHTTMVPLYGR QSAKEAEVDPRGLLIPPRPSAFGNKV
Sbjct: 61  HIQSASLLPDEPPQCPVCKADISHTTMVPLYGRDQSAKEAEVDPRGLLIPPRPSAFGNKV 120

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LASIGSNNASGEQLVY DLYQ QNDNFDMYDSYEEDSSSSLFN+EDNPVGSFGHPTARMF
Sbjct: 121 LASIGSNNASGEQLVYGDLYQNQNDNFDMYDSYEEDSSSSLFNMEDNPVGSFGHPTARMF 180

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
           GETVY RLFGSSE+L+AHPNSYALTGSGSPQLR+QEKSLNRISIFLFCCFVLCLAIF
Sbjct: 181 GETVYGRLFGSSENLYAHPNSYALTGSGSPQLRMQEKSLNRISIFLFCCFVLCLAIF 237

[Close]

BLAST of CmaCh13G006490 vs. ExPASy TrEMBL
Match: A0A1S3B6D8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103486320 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.9e-103
Identity = 184/241 (76.35%), Postives = 203/241 (84.23%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFS  WR+ +PA SM NSE+FK CFDCNICL+FASEPIVTLCGHLYCWPCIYKWL
Sbjct: 1   MAFEHYFSHGWRKQIPA-SMANSEKFKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWL 60

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           HVQS SL PDEPPQCPVCKADISHTTMVPLYGRGQSA+ AE D RG LIPPRPSAFGNK 
Sbjct: 61  HVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEHAEDDARGTLIPPRPSAFGNKA 120

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LA+I SNNAS +Q  Y DL Q QN NFD+YDSYEEDS SSLF+LEDNPVGS  HPTA + 
Sbjct: 121 LATIRSNNASSQQFAYGDLDQNQNYNFDVYDSYEEDSGSSLFSLEDNPVGSSHHPTAGLL 180

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLR----IQEKSLNRISIFLFCCFVLCLAI 238
           G TVY RL+G SE+++ HPNSY L+GS SP+LR    + EKSLNRIS FLFCCF+LCLA+
Sbjct: 181 GGTVYGRLYGDSENVYRHPNSYGLSGSNSPRLRRQEIVAEKSLNRISFFLFCCFILCLAV 240

[Close]

BLAST of CmaCh13G006490 vs. ExPASy TrEMBL
Match: A0A5A7UTV8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00770 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.9e-103
Identity = 184/241 (76.35%), Postives = 203/241 (84.23%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFS  WR+ +PA SM NSE+FK CFDCNICL+FASEPIVTLCGHLYCWPCIYKWL
Sbjct: 1   MAFEHYFSHGWRKQIPA-SMANSEKFKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWL 60

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           HVQS SL PDEPPQCPVCKADISHTTMVPLYGRGQSA+ AE D RG LIPPRPSAFGNK 
Sbjct: 61  HVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEHAEDDARGTLIPPRPSAFGNKA 120

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LA+I SNNAS +Q  Y DL Q QN NFD+YDSYEEDS SSLF+LEDNPVGS  HPTA + 
Sbjct: 121 LATIRSNNASSQQFAYGDLDQNQNYNFDVYDSYEEDSGSSLFSLEDNPVGSSHHPTAGLL 180

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLR----IQEKSLNRISIFLFCCFVLCLAI 238
           G TVY RL+G SE+++ HPNSY L+GS SP+LR    + EKSLNRIS FLFCCF+LCLA+
Sbjct: 181 GGTVYGRLYGDSENVYRHPNSYGLSGSNSPRLRRQEIVAEKSLNRISFFLFCCFILCLAV 240

[Close]

BLAST of CmaCh13G006490 vs. ExPASy TrEMBL
Match: A0A0A0LUK5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073810 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 8.4e-102
Identity = 181/241 (75.10%), Postives = 203/241 (84.23%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           M FEHYFS  WR+ +PA SMENSE+FK CFDCNICL+FAS+PIVTLCGHLYCWPCIYKWL
Sbjct: 1   MGFEHYFSHGWRKQIPA-SMENSEKFKPCFDCNICLDFASDPIVTLCGHLYCWPCIYKWL 60

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           HVQS SL PDEPPQCPVCKA+ISHTTMVPLYGRGQSA+ AEVD RG+LIPPRPSAFGNK 
Sbjct: 61  HVQSASLAPDEPPQCPVCKANISHTTMVPLYGRGQSAEHAEVDARGMLIPPRPSAFGNKA 120

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LA+I SNNAS +Q  Y DL Q QN NFD+YDSYEEDS SSLF+LEDNPVGS  HPTA M 
Sbjct: 121 LATIRSNNASSQQFAYGDLDQNQNYNFDVYDSYEEDSGSSLFSLEDNPVGSSHHPTAGML 180

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLR----IQEKSLNRISIFLFCCFVLCLAI 238
           GETVY R +  SE+++ HPNSY L+GS SP+LR    + EKSLN+I  FLFCCF+LCLA+
Sbjct: 181 GETVYGRFYWDSENIYRHPNSYGLSGSNSPRLRRQEIVAEKSLNKIYFFLFCCFLLCLAV 240

[Close]

BLAST of CmaCh13G006490 vs. NCBI nr
Match: XP_023001746.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_023001747.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_023001748.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima])

HSP 1 Score: 497.3 bits (1279), Expect = 7.4e-137
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL
Sbjct: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV
Sbjct: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF
Sbjct: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
           GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF
Sbjct: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 237

[Close]

BLAST of CmaCh13G006490 vs. NCBI nr
Match: XP_023519102.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo] >XP_023519103.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo] >XP_023519104.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.6 bits (1233), Expect = 1.6e-131
Identity = 228/237 (96.20%), Postives = 233/237 (98.31%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFSRRWRRCVPASSMENSE+FKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL
Sbjct: 1   MAFEHYFSRRWRRCVPASSMENSEKFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           HVQS SLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV
Sbjct: 61  HVQSASLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LASIGSNNASGEQLVY DLYQ QNDNFDMYDSYEEDSSSSLFN+EDNPVGSFGHPTARMF
Sbjct: 121 LASIGSNNASGEQLVYGDLYQNQNDNFDMYDSYEEDSSSSLFNMEDNPVGSFGHPTARMF 180

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
           GETVY RLFGSSE+L+AHPNSYALTGSGSPQLR+QEKSLNRISIFLFCCFVLCLAIF
Sbjct: 181 GETVYGRLFGSSENLYAHPNSYALTGSGSPQLRMQEKSLNRISIFLFCCFVLCLAIF 237

[Close]

BLAST of CmaCh13G006490 vs. NCBI nr
Match: KAG7019622.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 477.2 bits (1227), Expect = 8.0e-131
Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFSRRWRRCVPASSMENSE+FKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL
Sbjct: 102 MAFEHYFSRRWRRCVPASSMENSEKFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 161

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           HVQS SLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSA GNKV
Sbjct: 162 HVQSASLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSALGNKV 221

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LASIGSNNASGEQLVY DLYQ QNDNFDMYDSYEEDSSSSLFN+EDNPVGSFGHPTARMF
Sbjct: 222 LASIGSNNASGEQLVYGDLYQNQNDNFDMYDSYEEDSSSSLFNMEDNPVGSFGHPTARMF 281

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
           GETVY RLFGSSE+L+AHPNSYALTGSGSPQLR+QEKSLNRISIFLFCCFVLCLAIF
Sbjct: 282 GETVYGRLFGSSENLYAHPNSYALTGSGSPQLRMQEKSLNRISIFLFCCFVLCLAIF 338

[Close]

BLAST of CmaCh13G006490 vs. NCBI nr
Match: KAG6584000.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 477.2 bits (1227), Expect = 8.0e-131
Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFSRRWRRCVPASSMENSE+FKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL
Sbjct: 43  MAFEHYFSRRWRRCVPASSMENSEKFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 102

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           HVQS SLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSA GNKV
Sbjct: 103 HVQSASLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSALGNKV 162

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LASIGSNNASGEQLVY DLYQ QNDNFDMYDSYEEDSSSSLFN+EDNPVGSFGHPTARMF
Sbjct: 163 LASIGSNNASGEQLVYGDLYQNQNDNFDMYDSYEEDSSSSLFNMEDNPVGSFGHPTARMF 222

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
           GETVY RLFGSSE+L+AHPNSYALTGSGSPQLR+QEKSLNRISIFLFCCFVLCLAIF
Sbjct: 223 GETVYGRLFGSSENLYAHPNSYALTGSGSPQLRMQEKSLNRISIFLFCCFVLCLAIF 279

[Close]

BLAST of CmaCh13G006490 vs. NCBI nr
Match: XP_022926997.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022926998.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022926999.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 226/237 (95.36%), Postives = 232/237 (97.89%), Query Frame = 0


Query: 1   MAFEHYFSRRWRRCVPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60
           MAFEHYFSRRWRRCVPASSMENSE+FKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL
Sbjct: 1   MAFEHYFSRRWRRCVPASSMENSEKFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWL 60

Query: 61  HVQSDSLLPDEPPQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKV 120
           H+QS SLLPDEPPQCPVCKADISHTTMVPLYGR QSAKEAEVDPRGLLIPPRPSAFGNKV
Sbjct: 61  HIQSASLLPDEPPQCPVCKADISHTTMVPLYGRDQSAKEAEVDPRGLLIPPRPSAFGNKV 120

Query: 121 LASIGSNNASGEQLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMF 180
           LASIGSNNASGEQLVY DLYQ QNDNFDMYDSYEEDSSSSLFN+EDNPVGSFGHPTARMF
Sbjct: 121 LASIGSNNASGEQLVYGDLYQNQNDNFDMYDSYEEDSSSSLFNMEDNPVGSFGHPTARMF 180

Query: 181 GETVYARLFGSSESLHAHPNSYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
           GETVY RLFGSSE+L+AHPNSYALTGSGSPQLR+QEKSLNRISIFLFCCFVLCLAIF
Sbjct: 181 GETVYGRLFGSSENLYAHPNSYALTGSGSPQLRMQEKSLNRISIFLFCCFVLCLAIF 237

[Close]

BLAST of CmaCh13G006490 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-38
Identity = 87/217 (40.09%), Postives = 125/217 (57.60%), Query Frame = 0


Query: 29  CFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLLPDE-PPQCPVCKADISHTTM 88
           CFDCNICL+ A +P+VTLCGHL+CWPCIYKWLHVQ  S+  D+    CPVCK++I+ T++
Sbjct: 41  CFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSL 100

Query: 89  VPLYGRGQSAKEA-----EVDPRGLLIP--PRPSAFGNKVLASIGSNNASGEQLVYRDLY 148
           VPLYGRG S+  +     + D     IP  P PSA  N + ++   N +   Q +    +
Sbjct: 101 VPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFH 160

Query: 149 QYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMFGETVYARLFGSSESLHAHPN 208
            +Q        +   D ++++       + SF +P   MFG+ VY R+FG+  +  A P 
Sbjct: 161 NHQYSPRGFTTTESTDLANAV-------MMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPY 220

Query: 209 SYALTGSGSPQLRIQEKSLNRISIFLFCCFVLCLAIF 238
                   S ++  +EKSLNR+SIF  CC +LCL +F
Sbjct: 221 Q-------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of CmaCh13G006490 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 87/230 (37.83%), Postives = 120/230 (52.17%), Query Frame = 0


Query: 15  VPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLLPD--EP 74
           VP+   ++S      FDCNICL+   EP+VTLCGHL+CWPCI+KWL VQS S   +    
Sbjct: 36  VPSDDTDDSN-----FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 95

Query: 75  PQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKVLASIGSNNASGE 134
            QCPVCK+ +SH+T+VPLYGRG+   + E       +P RP   G      + ++  +  
Sbjct: 96  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS---VPKRP--VGPVYRLEMPNSPYAST 155

Query: 135 QLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMFGETVYARLFGSS 194
            L       + +     Y      SS+SL         +   P   M GE V  RLFG+ 
Sbjct: 156 DLRLSQRVHFNSPQEGYYPVSGVMSSNSL------SYSAVLDPVMVMVGEMVATRLFGTR 215

Query: 195 -ESLHAHPNSYALTGSGSPQLRIQ----EKSLNRISIFLFCCFVLCLAIF 238
                A+P++Y L G+  P++R +    +KSL RI  F  CC VLCL +F
Sbjct: 216 VMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CmaCh13G006490 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 87/230 (37.83%), Postives = 120/230 (52.17%), Query Frame = 0


Query: 15  VPASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLLPD--EP 74
           VP+   ++S      FDCNICL+   EP+VTLCGHL+CWPCI+KWL VQS S   +    
Sbjct: 36  VPSDDTDDSN-----FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 95

Query: 75  PQCPVCKADISHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKVLASIGSNNASGE 134
            QCPVCK+ +SH+T+VPLYGRG+   + E       +P RP   G      + ++  +  
Sbjct: 96  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS---VPKRP--VGPVYRLEMPNSPYAST 155

Query: 135 QLVYRDLYQYQNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMFGETVYARLFGSS 194
            L       + +     Y      SS+SL         +   P   M GE V  RLFG+ 
Sbjct: 156 DLRLSQRVHFNSPQEGYYPVSGVMSSNSL------SYSAVLDPVMVMVGEMVATRLFGTR 215

Query: 195 -ESLHAHPNSYALTGSGSPQLRIQ----EKSLNRISIFLFCCFVLCLAIF 238
                A+P++Y L G+  P++R +    +KSL RI  F  CC VLCL +F
Sbjct: 216 VMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CmaCh13G006490 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 76/216 (35.19%), Postives = 106/216 (49.07%), Query Frame = 0


Query: 30  FDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLL-------PDEPPQCPVCKADI 89
           FDCNICL+   +P+VTLCGHL+CWPCI+KW +  ++S           EPP+CPVCK+D+
Sbjct: 19  FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDV 78

Query: 90  SHTTMVPLYGRGQSAKEAEVDPRGLLIPPRPSAFGNKVLASIGSNNASGEQLVYRDLYQY 149
           S  T+VP+YGRGQ A ++     G  +P RP+      L  +G     GE   Y      
Sbjct: 79  SEATLVPIYGRGQKAPQS-----GSNVPSRPTG-PVYDLRGVGQRLGEGESQRY------ 138

Query: 150 QNDNFDMYDSYEEDSSSSLFNLEDNPVGSFGHPTARMFGETVYARLFGSSESLHAHPNSY 209
                             ++ + D        P   +  E VY RLFG S S  A    Y
Sbjct: 139 ------------------MYRMPD--------PVMGVVCEMVYRRLFGESSSNMA---PY 193

Query: 210 ALTGSGSPQLRIQ-EKSLNRISIFLFCCFVLCLAIF 238
                 S +  +Q E+SL+R+ +FL C   +CL +F
Sbjct: 199 RDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of CmaCh13G006490 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.1e-24
Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 17  ASSMENSEQFKACFDCNICLEFASEPIVTLCGHLYCWPCIYKWLHVQSDSLLPDEPPQCP 76
           +S  + +    + F+CNICL+ A +PIVTLCGHL+CWPC+YKWLH+ S S        CP
Sbjct: 8   SSGNDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQS------KDCP 67

Query: 77  VCKADISHTTMVPLYGRGQSAKEAEVDPR-----GLLIPPRPS 115
           VCKA I    +VPLYGRG+S+     DPR     GL +P RPS
Sbjct: 68  VCKAVIEEDRLVPLYGRGKSS----ADPRSKSIPGLEVPNRPS 100

The following BLAST results are available for this feature:

BLAST of CmaCh13G006490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	9.4e-42	45.11	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
Q8GUK7	3.1e-37	40.09	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
O64425	1.5e-31	37.83	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
P93030	1.9e-26	35.19	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
O35445	4.5e-20	53.49	E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1	[more]

BLAST of CmaCh13G006490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJG8	3.6e-137	100.00	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111495...	[more]
A0A6J1EJS4	6.6e-131	95.36	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A1S3B6D8	9.9e-103	76.35	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103486320 ...	[more]
A0A5A7UTV8	9.9e-103	76.35	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0LUK5	8.4e-102	75.10	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073810 P...	[more]

BLAST of CmaCh13G006490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001746.1	7.4e-137	100.00	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_023001747.1 E3 ub...	[more]
XP_023519102.1	1.6e-131	96.20	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo] >XP_0235191...	[more]
KAG7019622.1	8.0e-131	95.78	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
KAG6584000.1	8.0e-131	95.78	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022926997.1	1.4e-130	95.36	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022926998.1 E3 ...	[more]

BLAST of CmaCh13G006490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	2.2e-38	40.09	RING membrane-anchor 3	[more]
AT4G03510.1	1.1e-32	37.83	RING membrane-anchor 1	[more]
AT4G03510.2	1.1e-32	37.83	RING membrane-anchor 1	[more]
AT4G28270.1	1.3e-27	35.19	RING membrane-anchor 2	[more]
AT1G19310.1	3.1e-24	50.49	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 32..78 e-value: 7.0E-9 score: 45.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 32..79 score: 12.459772
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 15..92 e-value: 6.6E-17 score: 62.7
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 32..78 e-value: 2.6E-8 score: 33.6
None	No IPR available	PANTHER	PTHR12313:SF6	E3 UBIQUITIN-PROTEIN LIGASE RMA3	coord: 2..237
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 30..80 e-value: 1.14693E-24 score: 90.4411
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 24..91
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..237
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 47..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G006490.1	CmaCh13G006490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016020	membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity