CmaCh13G005260 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G005260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	101 kDa malaria antigen-like
Location	Cma_Chr13: 5522087 .. 5522895 (-)
RNA-Seq Expression	CmaCh13G005260
Synteny	CmaCh13G005260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCAAAAGCCTCTCTGTTTGTTCTTGTTCCAATGGCCATGAAACCCAGAAGCAAGTGCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACCCCAATTTCTGGTTTTGCCTCTCCAACACTCTCGTTGTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCGCCCACCTTCAACGCCGTAATCATCCCAACCCCACCACCAAATAACTTCAGTTCCGGCAACCCAACTGAAAATCAAGAACAACAAATCCCACTTCCCACTGGTATTGACACATTTTTATTTTCACTCTTCTTATTTTAATCTTTTAAATCGTTGTTCCAGATTTTTAGACATGTTTTGAGCTAATTTGGGTTAGTTATTTCAGAAATTTTGATTCCTCTCGAACTTAATAATTCGAGAAAATCTTACGATCGAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAGACGAAGATTGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGGAAGAAGAGAGGAAGAATGAGTTAGCAGAGATGTCAAATGAAGAACTTAACAAAAGAGTTGAAGAGTTTATTGAAAGATTCAATAGACAGATAAGACTTCAAGCAATTGGAGATAGCAATGAGGTGTAGAAGGAGCTATGGATCAATATTATGTCTGTTTCGTGTATTATTGTAATATCAACTCGAATATAATTCAACTAGTTAATATTTTGTTTTTTAAATTATTAGCCTTA

mRNA sequence

TTTTCAAAAGCCTCTCTGTTTGTTCTTGTTCCAATGGCCATGAAACCCAGAAGCAAGTGCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACCCCAATTTCTGGTTTTGCCTCTCCAACACTCTCGTTGTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCGCCCACCTTCAACGCCGTAATCATCCCAACCCCACCACCAAATAACTTCAGTTCCGGCAACCCAACTGAAAATCAAGAACAACAAATCCCACTTCCCACTGAAATTTTGATTCCTCTCGAACTTAATAATTCGAGAAAATCTTACGATCGAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAGACGAAGATTGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGGAAGAAGAGAGGAAGAATGAGTTAGCAGAGATGTCAAATGAAGAACTTAACAAAAGAGTTGAAGAGTTTATTGAAAGATTCAATAGACAGATAAGACTTCAAGCAATTGGAGATAGCAATGAGGTGTAGAAGGAGCTATGGATCAATATTATGTCTGTTTCGTGTATTATTGTAATATCAACTCGAATATAATTCAACTAGTTAATATTTTGTTTTTTAAATTATTAGCCTTA

Coding sequence (CDS)

ATGGCCATGAAACCCAGAAGCAAGTGCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACCCCAATTTCTGGTTTTGCCTCTCCAACACTCTCGTTGTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCGCCCACCTTCAACGCCGTAATCATCCCAACCCCACCACCAAATAACTTCAGTTCCGGCAACCCAACTGAAAATCAAGAACAACAAATCCCACTTCCCACTGAAATTTTGATTCCTCTCGAACTTAATAATTCGAGAAAATCTTACGATCGAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAGACGAAGATTGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGGAAGAAGAGAGGAAGAATGAGTTAGCAGAGATGTCAAATGAAGAACTTAACAAAAGAGTTGAAGAGTTTATTGAAAGATTCAATAGACAGATAAGACTTCAAGCAATTGGAGATAGCAATGAGGTGTAG

Protein sequence

MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIAAHSRAFSPPPTFNAVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDRSKSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFIERFNRQIRLQAIGDSNEV

Homology

[Close]

BLAST of CmaCh13G005260 vs. ExPASy TrEMBL
Match: A0A6J1KIQ0 (uncharacterized protein LOC111495597 OS=Cucurbita maxima OX=3661 GN=LOC111495597 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA
Sbjct: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60

Query: 61  AHSRAFSPPPTFNAVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDRS 120
           AHSRAFSPPPTFNAVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDRS
Sbjct: 61  AHSRAFSPPPTFNAVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDRS 120

Query: 121 KSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFIERFNRQIRL 180
           KSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFIERFNRQIRL
Sbjct: 121 KSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFIERFNRQIRL 180

Query: 181 QAIGDSNEV 190
           QAIGDSNEV
Sbjct: 181 QAIGDSNEV 189

[Close]

BLAST of CmaCh13G005260 vs. ExPASy TrEMBL
Match: A0A6J1EH50 (uncharacterized protein LOC111434146 OS=Cucurbita moschata OX=3662 GN=LOC111434146 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73
Identity = 164/198 (82.83%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           MAMKPR K LHLYAEEALCF AFLLSLFIYFSAFNLSLSTLFRH  FWFCLSNTL+ IIA
Sbjct: 1   MAMKPRRKFLHLYAEEALCFFAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIA 60

Query: 61  AHSRAFSPPPTFNA----VIIPTPPPNNFSSGNPTEN-QEQQIPLPTEILIPLELNNSRK 120
           AHSRAFS PPTFNA    VIIPTPPPNNF+SGNPTEN Q+QQIPLPTEI     +NN RK
Sbjct: 61  AHSRAFSQPPTFNAAASSVIIPTPPPNNFNSGNPTENHQQQQIPLPTEI----SINNPRK 120

Query: 121 SYDRSKSEKAMRRVAKETKIAMRRSKTM-------TRNEEEERKNELAEMSNEELNKRVE 180
           SYDRSKSEKA+RRVAKETKIAMRRSKTM       TRNE+EE KNELAEMSNEELNK+VE
Sbjct: 121 SYDRSKSEKAIRRVAKETKIAMRRSKTMTRNDATSTRNEKEETKNELAEMSNEELNKKVE 180

Query: 181 EFIERFNRQIRLQAIGDS 187
           EFIERFNRQ+RLQAIGDS
Sbjct: 181 EFIERFNRQMRLQAIGDS 194

[Close]

BLAST of CmaCh13G005260 vs. ExPASy TrEMBL
Match: A0A1S3B9V3 (101 kDa malaria antigen-like OS=Cucumis melo OX=3656 GN=LOC103487765 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 103/219 (47.03%), Postives = 126/219 (57.53%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           M +K   K LHL+A+ AL    F    F +F  F+LS S  F H NFWF LSNTL+ IIA
Sbjct: 12  MNIKLPKKFLHLFAKAALFLIFFF--FFFFFVYFSLS-SDFFNHTNFWFFLSNTLIFIIA 71

Query: 61  AHSRAFSPPPTFNAVIIPTP--PPNNF----------SSGNPTENQEQQ--------IPL 120
             S AFS P +F     P P  P +NF          +S  P + +E++        IPL
Sbjct: 72  LDSGAFSSPSSFIPAAKPNPTSPQHNFNNTIVVNELPNSPIPAQKEEEEEEEEEEITIPL 131

Query: 121 PTEILIPLELNNSRKSYDRSKSEKAMRRVA-KETKIAMRRSKTMTR-------------N 180
            TEI IP + NN  K Y RSKSEK ++R+A K  KI M+RSKTM R              
Sbjct: 132 TTEISIPPKFNNPIKPYQRSKSEKDIKRMAGKAKKITMKRSKTMIRQDATSTKEKEEEEE 191

Query: 181 EEEERKNELAEMSNEELNKRVEEFIERFNRQIRLQAIGD 186
           EEEE KNE  +M++EELN+RVEEFIERFNRQIRLQ I +
Sbjct: 192 EEEEEKNEFTKMTDEELNRRVEEFIERFNRQIRLQQINE 227

[Close]

BLAST of CmaCh13G005260 vs. ExPASy TrEMBL
Match: A0A0A0LUF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435700 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.2e-27
Identity = 102/210 (48.57%), Postives = 129/210 (61.43%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           M +K   K L+L+A+ AL    FL+S F  F  F+LS S LF H NFWF LSNTL+ +IA
Sbjct: 13  MNIKLPKKFLYLFAKGAL----FLISFF--FIYFSLS-SDLFNHTNFWFFLSNTLIFVIA 72

Query: 61  AHSRAFSPPPTFNAVIIPTP--PPNNF----------SSGNPTENQEQQ--IPLPTEILI 120
             S AFS P +F     P P  P +NF          +S  P +N+E++  IPL TEI  
Sbjct: 73  LDSGAFSSPSSFVPAAKPNPSSPQHNFNNTIVVNQLPNSPIPAQNEEEETIIPLTTEISF 132

Query: 121 PLELNNSRKSYDRSKSEKAMRR-VAKETKIAMRRSKTMTR------NEEEERKNELAEMS 180
           P + NN  K Y RSKSEK ++R V K  K+ MRRSKTM +       E+EE  +E  +M+
Sbjct: 133 PCKFNNPIKPYQRSKSEKDIKRMVEKAKKVRMRRSKTMIKQNGTSTKEKEEENDEFTKMT 192

Query: 181 NEELNKRVEEFIERFNRQIRLQAIG-DSNE 189
           +EELN+RVEEFIERFNRQIRLQ +  D NE
Sbjct: 193 DEELNRRVEEFIERFNRQIRLQEMNEDENE 215

[Close]

BLAST of CmaCh13G005260 vs. ExPASy TrEMBL
Match: A0A6J1CEX1 (uncharacterized protein LOC111010873 OS=Momordica charantia OX=3673 GN=LOC111010873 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-22
Identity = 96/190 (50.53%), Postives = 112/190 (58.95%), Query Frame = 0


Query: 10  LHLYAEEALCFSA-FLLSLFIYFSAFNLS-LSTLFRHPNFWFCLSNTLVVIIAAHSRAFS 69
           L+L AE A  F A FLLS+F Y S  NLS L TLF    FWFC+SNTL+ IIA    AFS
Sbjct: 11  LNLIAEGAPSFFAFFLLSIFTYVSVLNLSDLPTLFSDAKFWFCISNTLIFIIAVDFGAFS 70

Query: 70  PPPTFNAVIIPTPPPNNFSSGNPTENQEQQI--PLPTEILIPLELNNSRKSYDRSKSEKA 129
           PPP                    +EN   +I    P +        NS K+Y RSKSEKA
Sbjct: 71  PPP-------------EQIKSKQSENSAVKIVRERPNKSYRETRRGNSAKTYRRSKSEKA 130

Query: 130 MRRVAKETKIAMRRSKTMT---RNEEEE---RKNELAEMSNEELNKRVEEFIERFNRQIR 188
              V KE KIAMRRSKTMT    +EEEE     NE  EM++EELN+RVEEFIERFNR+IR
Sbjct: 131 ---VEKERKIAMRRSKTMTIKLHDEEEEASKEDNEFEEMTDEELNRRVEEFIERFNRRIR 184

[Close]

BLAST of CmaCh13G005260 vs. NCBI nr
Match: XP_023001471.1 (uncharacterized protein LOC111495597 [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 2.8e-94
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA
Sbjct: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60

Query: 61  AHSRAFSPPPTFNAVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDRS 120
           AHSRAFSPPPTFNAVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDRS
Sbjct: 61  AHSRAFSPPPTFNAVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDRS 120

Query: 121 KSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFIERFNRQIRL 180
           KSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFIERFNRQIRL
Sbjct: 121 KSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFIERFNRQIRL 180

Query: 181 QAIGDSNEV 190
           QAIGDSNEV
Sbjct: 181 QAIGDSNEV 189

[Close]

BLAST of CmaCh13G005260 vs. NCBI nr
Match: XP_023520396.1 (uncharacterized protein LOC111783708 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 168/191 (87.96%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           MAMKPR K LHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRH  FWFCLSNTL+ IIA
Sbjct: 1   MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIA 60

Query: 61  AHSRAFSPPPTFN--AVIIPTPPPNNFSSGNPTEN-QEQQIPLPTEILIPLELNNSRKSY 120
           AHSRAFSPPPTFN  AVIIPTPP NNF+SGNPTEN Q+QQIPLPTEI     +NNSRKSY
Sbjct: 61  AHSRAFSPPPTFNSAAVIIPTPPQNNFNSGNPTENHQQQQIPLPTEI----SINNSRKSY 120

Query: 121 DRSKSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFIERFNRQ 180
           D SKSEKAMRRVAKETK+AMRRSKTMTRNE+EE KNELAEMSNEELNKRVEEFIERFNRQ
Sbjct: 121 DPSKSEKAMRRVAKETKMAMRRSKTMTRNEKEETKNELAEMSNEELNKRVEEFIERFNRQ 180

Query: 181 IRLQAIGDSNE 189
           +RLQAIGDSNE
Sbjct: 181 MRLQAIGDSNE 187

[Close]

BLAST of CmaCh13G005260 vs. NCBI nr
Match: XP_023520395.1 (uncharacterized protein LOC111783708 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.4 bits (760), Expect = 9.0e-77
Identity = 167/197 (84.77%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           MAMKPR K LHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRH  FWFCLSNTL+ IIA
Sbjct: 1   MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIA 60

Query: 61  AHSRAFSPPPTFN--AVIIPTPPPNNFSSGNPTEN-QEQQIPLPTE------ILIPLELN 120
           AHSRAFSPPPTFN  AVIIPTPP NNF+SGNPTEN Q+QQIPLPT       I+  + +N
Sbjct: 61  AHSRAFSPPPTFNSAAVIIPTPPQNNFNSGNPTENHQQQQIPLPTGQIEFGLIISEISIN 120

Query: 121 NSRKSYDRSKSEKAMRRVAKETKIAMRRSKTMTRNEEEERKNELAEMSNEELNKRVEEFI 180
           NSRKSYD SKSEKAMRRVAKETK+AMRRSKTMTRNE+EE KNELAEMSNEELNKRVEEFI
Sbjct: 121 NSRKSYDPSKSEKAMRRVAKETKMAMRRSKTMTRNEKEETKNELAEMSNEELNKRVEEFI 180

Query: 181 ERFNRQIRLQAIGDSNE 189
           ERFNRQ+RLQAIGDSNE
Sbjct: 181 ERFNRQMRLQAIGDSNE 197

[Close]

BLAST of CmaCh13G005260 vs. NCBI nr
Match: KAG7019508.1 (hypothetical protein SDJN02_18469, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.9 bits (751), Expect = 9.9e-76
Identity = 165/196 (84.18%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           MAMKPR KCLHLYAEEALCF AFLLSLFIYFSAFNLSLSTLFRH NFWFCLSNTL+ IIA
Sbjct: 1   MAMKPRRKCLHLYAEEALCFVAFLLSLFIYFSAFNLSLSTLFRHTNFWFCLSNTLIFIIA 60

Query: 61  AHSRAFSPPPTFN-AVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDR 120
           AHSRAFSPP T N AVIIPTPP NNF+SGNPTENQ+QQIPLPTEI     +NN RKSYDR
Sbjct: 61  AHSRAFSPPHTVNSAVIIPTPPQNNFNSGNPTENQQQQIPLPTEI----SINNPRKSYDR 120

Query: 121 SKSEKAMRRVAKETKIAMRRSKTM-------TRNEEEERKNELAEMSNEELNKRVEEFIE 180
           SKSEKA+RRV KETKIAMRRSKTM       TRNE+EERK ELAEMSNEELNKRVEEFIE
Sbjct: 121 SKSEKAIRRVTKETKIAMRRSKTMTRNDATLTRNEKEERKKELAEMSNEELNKRVEEFIE 180

Query: 181 RFNRQIRLQAIGDSNE 189
           RFNRQ+RLQAIGDSN+
Sbjct: 181 RFNRQMRLQAIGDSNQ 192

[Close]

BLAST of CmaCh13G005260 vs. NCBI nr
Match: KAG6583890.1 (hypothetical protein SDJN03_19822, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293.9 bits (751), Expect = 9.9e-76
Identity = 165/196 (84.18%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIA 60
           MAMKPR KCLHLYAEEALCF AFLLSLFIYFSAFNLSLSTLFRH NFWFCLSNTL+ IIA
Sbjct: 1   MAMKPRRKCLHLYAEEALCFVAFLLSLFIYFSAFNLSLSTLFRHTNFWFCLSNTLIFIIA 60

Query: 61  AHSRAFSPPPTFN-AVIIPTPPPNNFSSGNPTENQEQQIPLPTEILIPLELNNSRKSYDR 120
           AHSRAFSPP T N AVIIPTPP NNF+SGNPTENQ+QQIPLPTEI     +NN RKSYDR
Sbjct: 61  AHSRAFSPPHTVNSAVIIPTPPQNNFNSGNPTENQQQQIPLPTEI----SINNPRKSYDR 120

Query: 121 SKSEKAMRRVAKETKIAMRRSKTM-------TRNEEEERKNELAEMSNEELNKRVEEFIE 180
           SKSEKA+RRV KETKIAMRRSKTM       TRNE+EERK ELAEMSNEELNKRVEEFIE
Sbjct: 121 SKSEKAIRRVTKETKIAMRRSKTMTRNDATLTRNEKEERKKELAEMSNEELNKRVEEFIE 180

Query: 181 RFNRQIRLQAIGDSNE 189
           RFNRQ++LQAIGDSNE
Sbjct: 181 RFNRQMKLQAIGDSNE 192

[Close]

BLAST of CmaCh13G005260 vs. TAIR 10
Match: AT2G34610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 6.8e-06
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 109 ELNNSRKSYDRSKSEKAMRRVAKETKIAMRRSKTMTRNEE--EERKNELAEMSNEELNKR 168
           E+ +  KSYDRS+S+ +   V  + K A    +  T+  E  +E   E ++MSNEELN+R
Sbjct: 215 EIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWENVKEESEEFSKMSNEELNRR 274

Query: 169 VEEFIERFNRQIRLQ 182
           VE+FI+RFNR I+ Q
Sbjct: 275 VEDFIQRFNRDIKRQ 289

[Close]

BLAST of CmaCh13G005260 vs. TAIR 10
Match: AT1G30190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 4.4e-05
Identity = 68/251 (27.09%), Postives = 101/251 (40.24%), Query Frame = 0


Query: 13  YAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHPNFWFCLSNTLVVIIAA----------- 72
           Y+   L     + +  + F  F +SLS++F+     F +SNTL++IIAA           
Sbjct: 22  YSSSMLTIFLPIFTYIMIFHVFEVSLSSVFKDTKVLFFISNTLILIIAADYGSFSDKESQ 81

Query: 73  -------------HSRA--FSPPPTF----NAVIIPTPPPNNFSSGNPTENQEQQI---- 132
                         +RA  +SP P      N        P +    NP E  E  +    
Sbjct: 82  DFYGEYTVAAATMRNRADNYSPIPVLTYRENTKDGEIKNPKDVEFRNPEEEDEPMVKDII 141

Query: 133 ---------------------------PLPTEILIPLELNNSR------KSYDRSKSEKA 183
                                      P+  + L   E  N+R      K Y RSKS+K 
Sbjct: 142 CVSPPEKIVRVVSEKKQRDDVAMEEYKPVTEQTLASEEACNTRNHVNPNKPYGRSKSDKP 201

The following BLAST results are available for this feature:

BLAST of CmaCh13G005260 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh13G005260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KIQ0	1.3e-94	100.00	uncharacterized protein LOC111495597 OS=Cucurbita maxima OX=3661 GN=LOC111495597...	[more]
A0A6J1EH50	2.2e-73	82.83	uncharacterized protein LOC111434146 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]
A0A1S3B9V3	1.1e-27	47.03	101 kDa malaria antigen-like OS=Cucumis melo OX=3656 GN=LOC103487765 PE=4 SV=1	[more]
A0A0A0LUF0	3.2e-27	48.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435700 PE=4 SV=1	[more]
A0A6J1CEX1	1.4e-22	50.53	uncharacterized protein LOC111010873 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of CmaCh13G005260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001471.1	2.8e-94	100.00	uncharacterized protein LOC111495597 [Cucurbita maxima]	[more]
XP_023520396.1	1.4e-77	87.96	uncharacterized protein LOC111783708 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023520395.1	9.0e-77	84.77	uncharacterized protein LOC111783708 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7019508.1	9.9e-76	84.18	hypothetical protein SDJN02_18469, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6583890.1	9.9e-76	84.18	hypothetical protein SDJN03_19822, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh13G005260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34610.1	6.8e-06	44.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G30190.1	4.4e-05	27.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 144..173
None	No IPR available	PANTHER	PTHR35997	COTTON FIBER PROTEIN-RELATED	coord: 100..183 coord: 17..67
None	No IPR available	PANTHER	PTHR35997:SF6	COTTON FIBER PROTEIN	coord: 17..67
None	No IPR available	PANTHER	PTHR35997:SF6	COTTON FIBER PROTEIN	coord: 100..183
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 161..181 e-value: 3.8E-6 score: 26.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G005260.1	CmaCh13G005260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane