CmaCh13G000770 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh13G000770
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptiontranscription factor MYB64-like
LocationCma_Chr13: 584706 .. 585296 (+)
RNA-Seq ExpressionCmaCh13G000770
SyntenyCmaCh13G000770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGCAACGCGCCGCCGTCGGGTCCGCCACTAGCAGCCATAGATCGATTTCTCTACAGCCACAACGTGAACGGAAATTGCTTTGAGAATGGGTTGATGGGAGGAGGGTTGTCGCCGGAAAGTTGCGGCGGCGAGTGGTTTGAAACGGACGGGAGGCTGCGCGTGGAGGAAGCATTACGATTCCAATTAGAATTAGAATTAGAGGAATTAGAAGAAGAAGAAGAAGAATTCGAAGAAATGTACGGATGGGGAAGAAGAAAGGAAGGAAAGTGTGAAATGGGTCTGAAGGAGGCCATGGTTTCACCAAATCATGAAGGGAAAATTTGTTCCAAACTCAAGAAATTAAAGAAGCCTTCTTCTGCAATTCTCATTAAAGGACAGTGGACTGAAGAAGAAGACAGGTGATCTTCCTTACCATTTCTTTCTAATATTACCTACATATTAATAATAATAAAATATTACATATATACATATATATATATATATATTGTAATTTATATGTATTACAGGTAGGAATGGAACCAACAAGCTTCCGTCATATATTGTAATTTTTTTTTTTTTTTTTTATAGTTTATATATTATAGATAG

mRNA sequence

ATGCAGAGCAACGCGCCGCCGTCGGGTCCGCCACTAGCAGCCATAGATCGATTTCTCTACAGCCACAACGTGAACGGAAATTGCTTTGAGAATGGGTTGATGGGAGGAGGGTTGTCGCCGGAAAGTTGCGGCGGCGAGTGGTTTGAAACGGACGGGAGGCTGCGCGTGGAGGAAGCATTACGATTCCAATTAGAATTAGAATTAGAGGAATTAGAAGAAGAAGAAGAAGAATTCGAAGAAATGTACGGATGGGGAAGAAGAAAGGAAGGAAAGTGTGAAATGGGTCTGAAGGAGGCCATGGTTTCACCAAATCATGAAGGGAAAATTTGTTCCAAACTCAAGAAATTAAAGAAGCCTTCTTCTGCAATTCTCATTAAAGGACAGTGGACTGAAGAAGAAGACAGGAATGGAACCAACAAGCTTCCGTCATATATTTTTATATATTATAGATAG

Coding sequence (CDS)

ATGCAGAGCAACGCGCCGCCGTCGGGTCCGCCACTAGCAGCCATAGATCGATTTCTCTACAGCCACAACGTGAACGGAAATTGCTTTGAGAATGGGTTGATGGGAGGAGGGTTGTCGCCGGAAAGTTGCGGCGGCGAGTGGTTTGAAACGGACGGGAGGCTGCGCGTGGAGGAAGCATTACGATTCCAATTAGAATTAGAATTAGAGGAATTAGAAGAAGAAGAAGAAGAATTCGAAGAAATGTACGGATGGGGAAGAAGAAAGGAAGGAAAGTGTGAAATGGGTCTGAAGGAGGCCATGGTTTCACCAAATCATGAAGGGAAAATTTGTTCCAAACTCAAGAAATTAAAGAAGCCTTCTTCTGCAATTCTCATTAAAGGACAGTGGACTGAAGAAGAAGACAGGAATGGAACCAACAAGCTTCCGTCATATATTTTTATATATTATAGATAG

Protein sequence

MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEALRFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPSSAILIKGQWTEEEDRNGTNKLPSYIFIYYR
Homology
BLAST of CmaCh13G000770 vs. ExPASy TrEMBL
Match: A0A6J1I2P9 (transcription factor MYB64-like OS=Cucurbita maxima OX=3661 GN=LOC111469383 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.7e-72
Identity = 137/144 (95.14%), Postives = 138/144 (95.83%), Query Frame = 0

Query: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL 60
           MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL
Sbjct: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL 60

Query: 61  RFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPS 120
           RFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPS
Sbjct: 61  RFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPS 120

Query: 121 SAILIKGQWTEEEDRNGTNKLPSY 145
           SAILIKGQWTEEEDR  T  +  Y
Sbjct: 121 SAILIKGQWTEEEDRKLTRLVKQY 144

BLAST of CmaCh13G000770 vs. ExPASy TrEMBL
Match: A0A6J1HLU2 (transcription factor MYB64-like OS=Cucurbita moschata OX=3662 GN=LOC111464737 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 8.8e-57
Identity = 118/138 (85.51%), Postives = 121/138 (87.68%), Query Frame = 0

Query: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL 60
           MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFE DGRLRVEEAL
Sbjct: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFEMDGRLRVEEAL 60

Query: 61  RFQLEL---ELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLK 120
           R Q+EL   ELEELEE EEE  EMYGWGRR EGK       AM++PNHE KICSKLKKLK
Sbjct: 61  RLQIELELEELEELEELEEEDSEMYGWGRRNEGK-------AMITPNHERKICSKLKKLK 120

Query: 121 KPSSAILIKGQWTEEEDR 136
           KPSSAILIKGQWTEEEDR
Sbjct: 121 KPSSAILIKGQWTEEEDR 131

BLAST of CmaCh13G000770 vs. ExPASy TrEMBL
Match: A0A1S3C5S6 (protein ODORANT1 OS=Cucumis melo OX=3656 GN=LOC103497228 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.2e-38
Identity = 99/143 (69.23%), Postives = 108/143 (75.52%), Query Frame = 0

Query: 1   MQSNA-PPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESC----GGEWFETDGRLR 60
           MQSNA PPS PPLAAIDRFLYSHNVNGNCF+ GL+ GGLSPE C    GGEW E + R R
Sbjct: 1   MQSNAPPPSAPPLAAIDRFLYSHNVNGNCFQKGLI-GGLSPEICGGGSGGEWIEIEKRRR 60

Query: 61  VEEALRFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMV--SPNHEGKIC-SK 120
           VEE    +LELE+EELEEEEEE E MYGWGR+    CEMG KE M+  S  +E K+C SK
Sbjct: 61  VEE----KLELEIEELEEEEEE-EIMYGWGRKNNNNCEMGFKEMMIRSSNINEVKVCSSK 120

Query: 121 LKKLKKPSSAILIKGQWTEEEDR 136
            KK KK SSA LIKGQWTEEEDR
Sbjct: 121 FKKFKKRSSASLIKGQWTEEEDR 137

BLAST of CmaCh13G000770 vs. ExPASy TrEMBL
Match: A0A0A0LVH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G529120 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.9e-33
Identity = 94/148 (63.51%), Postives = 102/148 (68.92%), Query Frame = 0

Query: 1   MQSNAPPSG--PPLAAIDRFLYSHNVNG-NCFENGLMGGGLSPESC-------GGEWFET 60
           M SNAPP    PPLAAIDRFLYSHNVNG NCFE GL+ GGLSPE C       GGEW E 
Sbjct: 1   MHSNAPPPSAVPPLAAIDRFLYSHNVNGNNCFEKGLI-GGLSPEICGGGSGGSGGEWIEV 60

Query: 61  DGRLRVEEALRFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMV--SPNHEGK 120
           + R RVEE    +LEL +EE EEEEEE E  YGWGR+     EMG +E M+  S  +E K
Sbjct: 61  EKRRRVEE----KLELGIEEDEEEEEEEEVTYGWGRKNNNNSEMGFEEMMIRSSNINEVK 120

Query: 121 IC-SKLKKLKKPSSAILIKGQWTEEEDR 136
           IC SK KK KK SSA LIKGQWTEEEDR
Sbjct: 121 ICSSKFKKFKKRSSANLIKGQWTEEEDR 143

BLAST of CmaCh13G000770 vs. ExPASy TrEMBL
Match: A0A5A7SM24 (Myb-related protein 315 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00530 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.6e-18
Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 0

Query: 1  MQSNA-PPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESC----GGEWFETDGRLR 60
          MQSNA PPS PPLAAIDRFLYSHNVNGNCF+ GL+ GGLSPE C    GG+W E +   R
Sbjct: 1  MQSNAPPPSAPPLAAIDRFLYSHNVNGNCFQKGLI-GGLSPEICGGGSGGKWIEIEKCRR 60

Query: 61 VEEALRFQLELELEELEEEEEEFEE 81
          VEE    +LELE+EELEEEEEE EE
Sbjct: 61 VEE----KLELEIEELEEEEEEEEE 80

BLAST of CmaCh13G000770 vs. NCBI nr
Match: XP_022970380.1 (transcription factor MYB64-like [Cucurbita maxima])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 137/144 (95.14%), Postives = 138/144 (95.83%), Query Frame = 0

Query: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL 60
           MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL
Sbjct: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL 60

Query: 61  RFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPS 120
           RFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPS
Sbjct: 61  RFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPS 120

Query: 121 SAILIKGQWTEEEDRNGTNKLPSY 145
           SAILIKGQWTEEEDR  T  +  Y
Sbjct: 121 SAILIKGQWTEEEDRKLTRLVKQY 144

BLAST of CmaCh13G000770 vs. NCBI nr
Match: KAG7019144.1 (Transcription factor MYB98, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 117/135 (86.67%), Postives = 121/135 (89.63%), Query Frame = 0

Query: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL 60
           MQSNAPPSGPPLAAIDRFLYSHN NGNCFENGLMGGGLSPE CGGEWFE DGRLRVEEAL
Sbjct: 1   MQSNAPPSGPPLAAIDRFLYSHNANGNCFENGLMGGGLSPERCGGEWFEMDGRLRVEEAL 60

Query: 61  RFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPS 120
           R +L+LELEELEEEEEE  EMYGWGRR EGK       AM++PNHEGKICSKLKKLKKPS
Sbjct: 61  RLELDLELEELEEEEEEDSEMYGWGRRNEGK-------AMITPNHEGKICSKLKKLKKPS 120

Query: 121 SAILIKGQWTEEEDR 136
           SAILIKGQWTEEEDR
Sbjct: 121 SAILIKGQWTEEEDR 128

BLAST of CmaCh13G000770 vs. NCBI nr
Match: KAG6583375.1 (Transcription factor MYB119, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57
Identity = 116/135 (85.93%), Postives = 120/135 (88.89%), Query Frame = 0

Query: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL 60
           MQSNA PSGPPLAAIDRFLYSHN NGNCFENGLMGGGLSPE CGGEWFE DGRLRVEEAL
Sbjct: 1   MQSNAAPSGPPLAAIDRFLYSHNANGNCFENGLMGGGLSPERCGGEWFEMDGRLRVEEAL 60

Query: 61  RFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLKKPS 120
           R +L+LELEELEEEEEE  EMYGWGRR EGK       AM++PNHEGKICSKLKKLKKPS
Sbjct: 61  RLELDLELEELEEEEEEDSEMYGWGRRNEGK-------AMITPNHEGKICSKLKKLKKPS 120

Query: 121 SAILIKGQWTEEEDR 136
           SAILIKGQWTEEEDR
Sbjct: 121 SAILIKGQWTEEEDR 128

BLAST of CmaCh13G000770 vs. NCBI nr
Match: XP_022964748.1 (transcription factor MYB64-like [Cucurbita moschata])

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-56
Identity = 118/138 (85.51%), Postives = 121/138 (87.68%), Query Frame = 0

Query: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFETDGRLRVEEAL 60
           MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFE DGRLRVEEAL
Sbjct: 1   MQSNAPPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESCGGEWFEMDGRLRVEEAL 60

Query: 61  RFQLEL---ELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMVSPNHEGKICSKLKKLK 120
           R Q+EL   ELEELEE EEE  EMYGWGRR EGK       AM++PNHE KICSKLKKLK
Sbjct: 61  RLQIELELEELEELEELEEEDSEMYGWGRRNEGK-------AMITPNHERKICSKLKKLK 120

Query: 121 KPSSAILIKGQWTEEEDR 136
           KPSSAILIKGQWTEEEDR
Sbjct: 121 KPSSAILIKGQWTEEEDR 131

BLAST of CmaCh13G000770 vs. NCBI nr
Match: XP_008457563.1 (PREDICTED: protein ODORANT1 [Cucumis melo])

HSP 1 Score: 167.9 bits (424), Expect = 6.5e-38
Identity = 99/143 (69.23%), Postives = 108/143 (75.52%), Query Frame = 0

Query: 1   MQSNA-PPSGPPLAAIDRFLYSHNVNGNCFENGLMGGGLSPESC----GGEWFETDGRLR 60
           MQSNA PPS PPLAAIDRFLYSHNVNGNCF+ GL+ GGLSPE C    GGEW E + R R
Sbjct: 1   MQSNAPPPSAPPLAAIDRFLYSHNVNGNCFQKGLI-GGLSPEICGGGSGGEWIEIEKRRR 60

Query: 61  VEEALRFQLELELEELEEEEEEFEEMYGWGRRKEGKCEMGLKEAMV--SPNHEGKIC-SK 120
           VEE    +LELE+EELEEEEEE E MYGWGR+    CEMG KE M+  S  +E K+C SK
Sbjct: 61  VEE----KLELEIEELEEEEEE-EIMYGWGRKNNNNCEMGFKEMMIRSSNINEVKVCSSK 120

Query: 121 LKKLKKPSSAILIKGQWTEEEDR 136
            KK KK SSA LIKGQWTEEEDR
Sbjct: 121 FKKFKKRSSASLIKGQWTEEEDR 137

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1I2P95.7e-7295.14transcription factor MYB64-like OS=Cucurbita maxima OX=3661 GN=LOC111469383 PE=4... [more]
A0A6J1HLU28.8e-5785.51transcription factor MYB64-like OS=Cucurbita moschata OX=3662 GN=LOC111464737 PE... [more]
A0A1S3C5S63.2e-3869.23protein ODORANT1 OS=Cucumis melo OX=3656 GN=LOC103497228 PE=4 SV=1[more]
A0A0A0LVH88.9e-3363.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G529120 PE=4 SV=1[more]
A0A5A7SM243.6e-1870.59Myb-related protein 315 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
XP_022970380.11.2e-7195.14transcription factor MYB64-like [Cucurbita maxima][more]
KAG7019144.12.0e-5886.67Transcription factor MYB98, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6583375.11.7e-5785.93Transcription factor MYB119, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022964748.11.8e-5685.51transcription factor MYB64-like [Cucurbita moschata][more]
XP_008457563.16.5e-3869.23PREDICTED: protein ODORANT1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G000770.1CmaCh13G000770.1mRNA