CmaCh12G011940 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G011940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptiontranscription factor WER-like
LocationCma_Chr12: 9364283 .. 9365299 (-)
RNA-Seq ExpressionCmaCh12G011940
SyntenyCmaCh12G011940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAAGTAAAGCGATGAAGCAACAGGCAAAGAAAAATTTATGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGTGAAGGGAATTGGGCAACTGTCTCCCAGGAGTCAGGTAAAAGAAAAATTACCTCACAACTATCTATTATCGATCGATATCAAATACGCACACAGACATTTCTATATCGGCTCTGATTCATCTTTCACATAACTCTAACACAGACAGTGAGACAAAGATGTCCGGGTTTTTTTTTTTTTTTTTTTGCATTTATGTGGTGCATGTGTGTATGTGTTCCTAACCTGGTCTCTCAGGTTTGATGCGAGGTGGGAAAAGCTGCAGACTAAGATGGAAGAATTACCTCCGTCCCAATATAAAGCGTGGGGGCATGTCCAAAGAGGAAGAGGACCTAATTATCCGTATGCATAAACTTTTAGGCAACAGGTCGGTTTGTATCGAATTAATCTCCAAAGCTTAATCAATACTTATAGTAAAAAGAGTAAACTGACTGAATGTTTGGATATTTCAACGGTGTTACTTCTTCCATCAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACTGATAATGAGGTGAAGAACTACTGGAATACCCATTTGAACAAGAATGGCCTGCAAGATAAAAGAAAAGTTAATGAATCAAACAGCTGCAAGAAAATGGATGAGGACGACGGGAATAATAAGAAGCAGAAGAAAGTTATCAACCAGACTAGCTATCCTCAACCGCAAATGTGCAGTGACAATGGGGCAAATCAGGCACATGATATACAGAGAAGGAGCCAGGAAGAGAACAGAGAAGTTACAGATCTTTGGAATATGGATGACATAACAAGTTATTATAATATAAACTGCCCAATGGTACCTGCAAATAACGCGACTTTTAACTTCGACGATGAGCCTTACTATAACCACCTTGATCCCTTCTTCCTGATTGAAGCATTTGGATGCAGTAGTGTTGATGCATCACTGGAGAACATGTGA

mRNA sequence

ATGGAGGAAAGTAAAGCGATGAAGCAACAGGCAAAGAAAAATTTATGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGTGAAGGGAATTGGGCAACTGTCTCCCAGGAGTCAGGTTTGATGCGAGGTGGGAAAAGCTGCAGACTAAGATGGAAGAATTACCTCCGTCCCAATATAAAGCGTGGGGGCATGTCCAAAGAGGAAGAGGACCTAATTATCCGTATGCATAAACTTTTAGGCAACAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACTGATAATGAGGTGAAGAACTACTGGAATACCCATTTGAACAAGAATGGCCTGCAAGATAAAAGAAAAGTTAATGAATCAAACAGCTGCAAGAAAATGGATGAGGACGACGGGAATAATAAGAAGCAGAAGAAAGTTATCAACCAGACTAGCTATCCTCAACCGCAAATGTGCAGTGACAATGGGGCAAATCAGGCACATGATATACAGAGAAGGAGCCAGGAAGAGAACAGAGAAGTTACAGATCTTTGGAATATGGATGACATAACAAGTTATTATAATATAAACTGCCCAATGGTACCTGCAAATAACGCGACTTTTAACTTCGACGATGAGCCTTACTATAACCACCTTGATCCCTTCTTCCTGATTGAAGCATTTGGATGCAGTAGTGTTGATGCATCACTGGAGAACATGTGA

Coding sequence (CDS)

ATGGAGGAAAGTAAAGCGATGAAGCAACAGGCAAAGAAAAATTTATGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGTGAAGGGAATTGGGCAACTGTCTCCCAGGAGTCAGGTTTGATGCGAGGTGGGAAAAGCTGCAGACTAAGATGGAAGAATTACCTCCGTCCCAATATAAAGCGTGGGGGCATGTCCAAAGAGGAAGAGGACCTAATTATCCGTATGCATAAACTTTTAGGCAACAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACTGATAATGAGGTGAAGAACTACTGGAATACCCATTTGAACAAGAATGGCCTGCAAGATAAAAGAAAAGTTAATGAATCAAACAGCTGCAAGAAAATGGATGAGGACGACGGGAATAATAAGAAGCAGAAGAAAGTTATCAACCAGACTAGCTATCCTCAACCGCAAATGTGCAGTGACAATGGGGCAAATCAGGCACATGATATACAGAGAAGGAGCCAGGAAGAGAACAGAGAAGTTACAGATCTTTGGAATATGGATGACATAACAAGTTATTATAATATAAACTGCCCAATGGTACCTGCAAATAACGCGACTTTTAACTTCGACGATGAGCCTTACTATAACCACCTTGATCCCTTCTTCCTGATTGAAGCATTTGGATGCAGTAGTGTTGATGCATCACTGGAGAACATGTGA

Protein sequence

MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTDLWNMDDITSYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM
Homology
[Close]
BLAST of CmaCh12G011940 vs. ExPASy Swiss-Prot
Match: Q9LTF7 (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49
Identity = 91/118 (77.12%), Postives = 101/118 (85.59%), Query Frame = 0 

Query: 8   KQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           K   K+ LWKPEED+IL++YVETHGEGNWA +S+ SGL RGGKSCRLRWKNYLRPNIKRG
Sbjct: 9   KSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRG 68

Query: 68  GMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKVNES 126
            MS +E+DLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK     ++   ES
Sbjct: 69  SMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAPES 126

[Close]
BLAST of CmaCh12G011940 vs. ExPASy Swiss-Prot
Match: Q96276 (Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0 

Query: 8   KQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           + + KK LW  EED IL +YV THG+G+W  +++++GL R GKSCRLRW NYL PN+ RG
Sbjct: 9   EHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRG 68

Query: 68  GMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKN-GLQD 119
             + +EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  GL D
Sbjct: 69  NFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGD 120

[Close]
BLAST of CmaCh12G011940 vs. ExPASy Swiss-Prot
Match: Q9FJA2 (Transcription factor TT2 OS=Arabidopsis thaliana OX=3702 GN=TT2 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.3e-38
Identity = 74/130 (56.92%), Postives = 95/130 (73.08%), Query Frame = 0 

Query: 8   KQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           +++  +  W   ED ILR+Y+ THGEG W+T+  ++GL R GKSCRLRWKNYLRP IKRG
Sbjct: 11  REELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRG 70

Query: 68  GMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKV----- 127
            +S +EE+LIIR+H LLGNRWSLIAGRLPGRTDNE+KN+WN++L K   + + K      
Sbjct: 71  NISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQTKQPKRIK 130

Query: 128 ----NESNSC 129
               NE+N C
Sbjct: 131 HSTNNENNVC 140

[Close]
BLAST of CmaCh12G011940 vs. ExPASy Swiss-Prot
Match: A0A4D6Q4S0 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37
Identity = 77/136 (56.62%), Postives = 97/136 (71.32%), Query Frame = 0 

Query: 8   KQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           K+   +  W   ED +L++Y+ THGEG W  + + +GL R GKSCRLRW NYLRP+IKRG
Sbjct: 9   KEGLNRGAWSAREDKVLKDYINTHGEGKWRDLPRRAGLKRCGKSCRLRWLNYLRPDIKRG 68

Query: 68  GMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKVNESNS 127
            +S +EE+LIIR+HKLLGNRWSLIAGRLPGRTDNE+KNYWNT+L+K       KVN    
Sbjct: 69  NISYDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLSK-------KVNSQTH 128

Query: 128 CKKMDEDDGNNKKQKK 144
             ++D D    KK K+
Sbjct: 129 QHEIDGDQVPLKKTKE 137

[Close]
BLAST of CmaCh12G011940 vs. ExPASy Swiss-Prot
Match: Q9SEI0 (Transcription factor WER OS=Arabidopsis thaliana OX=3702 GN=WER PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37
Identity = 87/179 (48.60%), Postives = 116/179 (64.80%), Query Frame = 0 

Query: 12  KKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRGGMSK 71
           KK LW  EED IL +YV+ HG+G+W  +++++GL R GKSCRLRW NYL PN+KRG  ++
Sbjct: 17  KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTE 76

Query: 72  EEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKN-GLQDKRKVNESNSCKK 131
           +EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  G++D          +K
Sbjct: 77  QEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGIKD----------QK 136

Query: 132 MDEDDGNNKKQKKVINQTSYPQPQMCS---DNGANQAHDIQRRSQEENREVTDLWNMDD 187
             + +G+   Q  + N T   +    S   DN      +IQ   Q  N  ++ LW  +D
Sbjct: 137 TKQSNGDIVYQINLPNPTETSEETKISNIVDNNNILGDEIQEDHQGSN-YLSSLWVHED 184

[Close]
BLAST of CmaCh12G011940 vs. ExPASy TrEMBL
Match: A0A6J1HMX7 (transcription factor WER-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465651 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 8.9e-136
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180
           KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD
Sbjct: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180

Query: 181 LWNMDDITSYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM 238
           LWNMDDITSYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM
Sbjct: 181 LWNMDDITSYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM 237

[Close]
BLAST of CmaCh12G011940 vs. ExPASy TrEMBL
Match: A0A6J1FGK0 (transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111443992 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.3e-130
Identity = 230/238 (96.64%), Postives = 235/238 (98.74%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180
           KVNES+SCKK DEDDGNNKKQKKVINQTSYPQPQMCSDN ANQAHDIQRR+QEENREVTD
Sbjct: 121 KVNESSSCKKKDEDDGNNKKQKKVINQTSYPQPQMCSDNWANQAHDIQRRNQEENREVTD 180

Query: 181 LWNMDDIT-SYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM 238
           LWNMDDIT S+YNINCPMVPANNATFNFDDEP++NHLDPFFLIEAFGCSSVDASLENM
Sbjct: 181 LWNMDDITSSHYNINCPMVPANNATFNFDDEPHFNHLDPFFLIEAFGCSSVDASLENM 238

[Close]
BLAST of CmaCh12G011940 vs. ExPASy TrEMBL
Match: A0A5D3BGT2 (Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00730 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 208/241 (86.31%), Postives = 219/241 (90.87%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKAMKQQ KKNLWKPEED ILR+YVETHGEGNWATVSQESGLMRG KSCRLRWKNYL
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDFILRSYVETHGEGNWATVSQESGLMRGAKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMDE---DDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENRE 180
           K N SNSCKK D+   DDGNNKKQKKVINQT YPQP +  DNGA+ AHDIQRR+QEENRE
Sbjct: 121 KANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDNGADLAHDIQRRNQEENRE 180

Query: 181 VTDLWNMDDIT-SYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLEN 238
             +  NMDDIT S+YNIN PM+PANN TFNFDDEPY++HLDPFFL EAFGCSSVDASL+N
Sbjct: 181 KQNPSNMDDITSSHYNINSPMIPANNTTFNFDDEPYFDHLDPFFLFEAFGCSSVDASLDN 240

[Close]
BLAST of CmaCh12G011940 vs. ExPASy TrEMBL
Match: A0A6J1G3P0 (transcription factor MYB82 OS=Cucurbita moschata OX=3662 GN=LOC111450489 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 208/241 (86.31%), Postives = 220/241 (91.29%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESK MKQQ KKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRG MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMD---EDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENRE 180
           K N+SNS KK D   +DD NNKKQKKVINQT YPQP +C DNG N AHD QRR+QEE RE
Sbjct: 121 KANDSNSHKKNDDDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEEKRE 180

Query: 181 VTDLWNMDDIT-SYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLEN 238
           VT+ WNMDDIT S+YNIN P+VPAN+ATFNFDDEPY++HLDPFFL+EAFGCSSV ASL+N
Sbjct: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEPYFDHLDPFFLLEAFGCSSVHASLDN 240

[Close]
BLAST of CmaCh12G011940 vs. ExPASy TrEMBL
Match: A0A1S3C427 (transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103496778 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 208/241 (86.31%), Postives = 219/241 (90.87%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKAMKQQ KKNLWKPEED ILR+YVETHGEGNWATVSQESGLMRG KSCRLRWKNYL
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDFILRSYVETHGEGNWATVSQESGLMRGAKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMDE---DDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENRE 180
           K N SNSCKK D+   DDGNNKKQKKVINQT YPQP +  DNGA+ AHDIQRR+QEENRE
Sbjct: 121 KANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDNGADLAHDIQRRNQEENRE 180

Query: 181 VTDLWNMDDIT-SYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLEN 238
             +  NMDDIT S+YNIN PM+PANN TFNFDDEPY++HLDPFFL EAFGCSSVDASL+N
Sbjct: 181 KQNPSNMDDITSSHYNINSPMIPANNTTFNFDDEPYFDHLDPFFLFEAFGCSSVDASLDN 240

[Close]
BLAST of CmaCh12G011940 vs. NCBI nr
Match: XP_022965906.1 (transcription factor WER-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 492.7 bits (1267), Expect = 1.8e-135
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180
           KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD
Sbjct: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180

Query: 181 LWNMDDITSYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM 238
           LWNMDDITSYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM
Sbjct: 181 LWNMDDITSYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM 237

[Close]
BLAST of CmaCh12G011940 vs. NCBI nr
Match: XP_022937653.1 (transcription factor WER-like [Cucurbita moschata])

HSP 1 Score: 474.2 bits (1219), Expect = 6.7e-130
Identity = 230/238 (96.64%), Postives = 235/238 (98.74%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180
           KVNES+SCKK DEDDGNNKKQKKVINQTSYPQPQMCSDN ANQAHDIQRR+QEENREVTD
Sbjct: 121 KVNESSSCKKKDEDDGNNKKQKKVINQTSYPQPQMCSDNWANQAHDIQRRNQEENREVTD 180

Query: 181 LWNMDDIT-SYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM 238
           LWNMDDIT S+YNINCPMVPANNATFNFDDEP++NHLDPFFLIEAFGCSSVDASLENM
Sbjct: 181 LWNMDDITSSHYNINCPMVPANNATFNFDDEPHFNHLDPFFLIEAFGCSSVDASLENM 238

[Close]
BLAST of CmaCh12G011940 vs. NCBI nr
Match: KAG6586381.1 (Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 473.8 bits (1218), Expect = 8.8e-130
Identity = 230/238 (96.64%), Postives = 234/238 (98.32%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180
           KVNES+SCKK DEDDGNNKKQKKVINQTSYPQPQMCSDN ANQAHDIQRR+QEENREVTD
Sbjct: 121 KVNESSSCKKKDEDDGNNKKQKKVINQTSYPQPQMCSDNWANQAHDIQRRNQEENREVTD 180

Query: 181 LWNMDDIT-SYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM 238
           LWNMDDIT S+YNINCPMVPANNATFNFDDEPY+NHLDPFFLIEA GCSSVDASLENM
Sbjct: 181 LWNMDDITSSHYNINCPMVPANNATFNFDDEPYFNHLDPFFLIEALGCSSVDASLENM 238

[Close]
BLAST of CmaCh12G011940 vs. NCBI nr
Match: KAG7021232.1 (Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468.4 bits (1204), Expect = 3.7e-128
Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK+GLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKSGLQDKR 120

Query: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180
           KVNES+SCKK DEDDGNNKKQKKVINQTSYPQPQMCSDN ANQ HDIQRR+QEENREVTD
Sbjct: 121 KVNESSSCKKKDEDDGNNKKQKKVINQTSYPQPQMCSDNWANQTHDIQRRNQEENREVTD 180

Query: 181 LWNMDDIT-SYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLEN 237
           LWNMDDIT S+YNINCPMVPANNATFNFDDEPY+NHLDPFFLIEA GCSSVDASLEN
Sbjct: 181 LWNMDDITSSHYNINCPMVPANNATFNFDDEPYFNHLDPFFLIEALGCSSVDASLEN 237

[Close]
BLAST of CmaCh12G011940 vs. NCBI nr
Match: XP_023536786.1 (transcription factor WER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468.4 bits (1204), Expect = 3.7e-128
Identity = 228/238 (95.80%), Postives = 232/238 (97.48%), Query Frame = 0 

Query: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKA KQQAKKNLWK EEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKATKQQAKKNLWKSEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KVNESNSCKKMDEDDGNNKKQKKVINQTSYPQPQMCSDNGANQAHDIQRRSQEENREVTD 180
           KVNES+SCKK DEDDGNNKKQKKVINQTSYPQPQMCSDN A QAHDIQRR+QEENREVTD
Sbjct: 121 KVNESSSCKKKDEDDGNNKKQKKVINQTSYPQPQMCSDNWAKQAHDIQRRNQEENREVTD 180

Query: 181 LWNMDDIT-SYYNINCPMVPANNATFNFDDEPYYNHLDPFFLIEAFGCSSVDASLENM 238
           LWNMDDIT S+YNINCPMVPANNATFNFDDEPY+NHLDPFFLIEAFGCSSVDASLENM
Sbjct: 181 LWNMDDITSSHYNINCPMVPANNATFNFDDEPYFNHLDPFFLIEAFGCSSVDASLENM 238

[Close]
BLAST of CmaCh12G011940 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 198.0 bits (502), Expect = 8.7e-51
Identity = 91/118 (77.12%), Postives = 101/118 (85.59%), Query Frame = 0 

Query: 8   KQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           K   K+ LWKPEED+IL++YVETHGEGNWA +S+ SGL RGGKSCRLRWKNYLRPNIKRG
Sbjct: 9   KSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRG 68

Query: 68  GMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKVNES 126
            MS +E+DLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK     ++   ES
Sbjct: 69  SMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAPES 126

[Close]
BLAST of CmaCh12G011940 vs. TAIR 10
Match: AT5G40330.1 (myb domain protein 23 )

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0 

Query: 8   KQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           + + KK LW  EED IL +YV THG+G+W  +++++GL R GKSCRLRW NYL PN+ RG
Sbjct: 9   EHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRG 68

Query: 68  GMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKN-GLQD 119
             + +EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  GL D
Sbjct: 69  NFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGD 120

[Close]
BLAST of CmaCh12G011940 vs. TAIR 10
Match: AT5G35550.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-39
Identity = 74/130 (56.92%), Postives = 95/130 (73.08%), Query Frame = 0 

Query: 8   KQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           +++  +  W   ED ILR+Y+ THGEG W+T+  ++GL R GKSCRLRWKNYLRP IKRG
Sbjct: 11  REELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRG 70

Query: 68  GMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKV----- 127
            +S +EE+LIIR+H LLGNRWSLIAGRLPGRTDNE+KN+WN++L K   + + K      
Sbjct: 71  NISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQTKQPKRIK 130

Query: 128 ----NESNSC 129
               NE+N C
Sbjct: 131 HSTNNENNVC 140

[Close]
BLAST of CmaCh12G011940 vs. TAIR 10
Match: AT5G14750.1 (myb domain protein 66 )

HSP 1 Score: 157.9 bits (398), Expect = 9.9e-39
Identity = 87/179 (48.60%), Postives = 116/179 (64.80%), Query Frame = 0 

Query: 12  KKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRGGMSK 71
           KK LW  EED IL +YV+ HG+G+W  +++++GL R GKSCRLRW NYL PN+KRG  ++
Sbjct: 17  KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTE 76

Query: 72  EEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKN-GLQDKRKVNESNSCKK 131
           +EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  G++D          +K
Sbjct: 77  QEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGIKD----------QK 136

Query: 132 MDEDDGNNKKQKKVINQTSYPQPQMCS---DNGANQAHDIQRRSQEENREVTDLWNMDD 187
             + +G+   Q  + N T   +    S   DN      +IQ   Q  N  ++ LW  +D
Sbjct: 137 TKQSNGDIVYQINLPNPTETSEETKISNIVDNNNILGDEIQEDHQGSN-YLSSLWVHED 184

[Close]
BLAST of CmaCh12G011940 vs. TAIR 10
Match: AT3G27920.1 (myb domain protein 0 )

HSP 1 Score: 154.8 bits (390), Expect = 8.4e-38
Identity = 75/127 (59.06%), Postives = 93/127 (73.23%), Query Frame = 0 

Query: 9   QQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRGG 68
           Q+ KK LW  EED IL +YV  HG G W  + +++GL R GKSCRLRW NYL PN+ +G 
Sbjct: 12  QEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGN 71

Query: 69  MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKVNESNSC 128
            +++EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  + D      S++ 
Sbjct: 72  FTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLVGD-----YSSAV 131

Query: 129 KKMDEDD 136
           K   EDD
Sbjct: 132 KTTGEDD 133

The following BLAST results are available for this feature:
BLAST of CmaCh12G011940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LTF71.2e-4977.12Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1[more]
Q962762.2e-3865.18Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1[more]
Q9FJA26.3e-3856.92Transcription factor TT2 OS=Arabidopsis thaliana OX=3702 GN=TT2 PE=1 SV=1[more]
A0A4D6Q4S01.4e-3756.62Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 ... [more]
Q9SEI01.4e-3748.60Transcription factor WER OS=Arabidopsis thaliana OX=3702 GN=WER PE=1 SV=1[more]
BLAST of CmaCh12G011940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HMX78.9e-136100.00transcription factor WER-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11146... [more]
A0A6J1FGK03.3e-13096.64transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111443992 PE=4... [more]
A0A5D3BGT21.9e-11486.31Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A6J1G3P01.9e-11486.31transcription factor MYB82 OS=Cucurbita moschata OX=3662 GN=LOC111450489 PE=4 SV... [more]
A0A1S3C4271.9e-11486.31transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103496778 PE=4 SV=1[more]
BLAST of CmaCh12G011940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022965906.11.8e-135100.00transcription factor WER-like isoform X1 [Cucurbita maxima][more]
XP_022937653.16.7e-13096.64transcription factor WER-like [Cucurbita moschata][more]
KAG6586381.18.8e-13096.64Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7021232.13.7e-12895.78Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023536786.13.7e-12895.80transcription factor WER-like [Cucurbita pepo subsp. pepo][more]
BLAST of CmaCh12G011940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52600.18.7e-5177.12myb domain protein 82 [more]
AT5G40330.11.5e-3965.18myb domain protein 23 [more]
AT5G35550.14.5e-3956.92Duplicated homeodomain-like superfamily protein [more]
AT5G14750.19.9e-3948.60myb domain protein 66 [more]
AT3G27920.18.4e-3859.06myb domain protein 0 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 12..62
e-value: 5.3E-12
score: 55.9
coord: 65..113
e-value: 1.8E-16
score: 70.7
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 61..111
score: 10.51063
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 8..60
score: 10.41773
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 16..60
e-value: 7.23857E-10
score: 51.037
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 69..111
e-value: 4.6289E-12
score: 57.2002
NoneNo IPR availableGENE3D1.10.10.60coord: 4..66
e-value: 3.0E-17
score: 64.2
NoneNo IPR availableGENE3D1.10.10.60coord: 69..149
e-value: 3.8E-20
score: 73.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..166
NoneNo IPR availablePANTHERPTHR47999TRANSCRIPTION FACTOR MYB8-RELATED-RELATEDcoord: 5..224
NoneNo IPR availablePANTHERPTHR47999:SF21TUBER-SPECIFIC AND SUCROSE-RESPONSIVE ELEMENT BINDING FACTORcoord: 5..224
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 66..111
e-value: 4.2E-14
score: 52.5
coord: 14..60
e-value: 6.7E-13
score: 48.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 61..115
score: 23.929272
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 8..60
score: 16.439093
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G011940.1CmaCh12G011940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0000976 transcription cis-regulatory region binding
molecular_function GO:0022857 transmembrane transporter activity