CmaCh12G011720 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G011720
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Two-component response regulator
Location	Cma_Chr12: 9241331 .. 9242018 (+)
RNA-Seq Expression	CmaCh12G011720
Synteny	CmaCh12G011720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAGATGCAGATATAAATTTAATTGTGTTGAATTGATGGAAGGGTTGGTTTTGATTGCATTTCTCTGTTCAAATATGGTTCTAGTGCTGTCTGCGCATAGCGATACCGAGCTTGTAAAGAAGGGAGTTTTTCACGGTGCTTGTGATTATTTGCTGAAACCCGTTCGAATTGAGGAGCTGAAGAATATATGGCAGCACGTCCTCCGAAGAAAGACTTCCTCAGCTAAGAACCAAAACGAGTGCACTAATGGAAATGACACTCTATGTCAAACTGTTGAAGTTGTAAAAGGTTTCCCATCTGCGGCAAGTGCTGATAACGGGAAACCTGGTAAAAGGCGGAAAGACGATGACGACGATGAGGAAGGAGGTGAAGAAGAGAGCGCATATGAGACCGACGACTCCTCCTCCCAAAAAAAGCAAAGGGTAGTTTGGTTCGGTGAGCTGCATAGGAAGTTTATTGCAGCTGTTAATCATTTGGGCTATGAAAGTAAGTCTTTTGGTGTTTTTTTATGCATTCTTGTGCTTAGTGCTTTGTTTTTTCTTCTTGATGTTTATATAAATTTCTGATGCAGAGGCCGTTCCTAAAAAGATCCTCGATCTAATGAACGTCGAAGGACTCACAAGAGAAAACGTCGCTAGCCATCTTCAGGCATTGATCTTTTCGTTCTTTTCGTTTATGTCTTAA

mRNA sequence

ATGTATAGATGCAGATATAAATTTAATTGTGTTGAATTGATGGAAGGGTTGGTTTTGATTGCATTTCTCTGTTCAAATATGGTTCTAGTGCTGTCTGCGCATAGCGATACCGAGCTTGTAAAGAAGGGAGTTTTTCACGGTGCTTGTGATTATTTGCTGAAACCCGTTCGAATTGAGGAGCTGAAGAATATATGGCAGCACGTCCTCCGAAGAAAGACTTCCTCAGCTAAGAACCAAAACGAGTGCACTAATGGAAATGACACTCTATGTCAAACTGTTGAAGTTGTAAAAGGTTTCCCATCTGCGGCAAGTGCTGATAACGGGAAACCTGGTAAAAGGCGGAAAGACGATGACGACGATGAGGAAGGAGGTGAAGAAGAGAGCGCATATGAGACCGACGACTCCTCCTCCCAAAAAAAGCAAAGGGTAGTTTGGTTCGGTGAGCTGCATAGGAAGTTTATTGCAGCTGTTAATCATTTGGGCTATGAAAAGGCCGTTCCTAAAAAGATCCTCGATCTAATGAACGTCGAAGGACTCACAAGAGAAAACGTCGCTAGCCATCTTCAGGCATTGATCTTTTCGTTCTTTTCGTTTATGTCTTAA

Coding sequence (CDS)

ATGTATAGATGCAGATATAAATTTAATTGTGTTGAATTGATGGAAGGGTTGGTTTTGATTGCATTTCTCTGTTCAAATATGGTTCTAGTGCTGTCTGCGCATAGCGATACCGAGCTTGTAAAGAAGGGAGTTTTTCACGGTGCTTGTGATTATTTGCTGAAACCCGTTCGAATTGAGGAGCTGAAGAATATATGGCAGCACGTCCTCCGAAGAAAGACTTCCTCAGCTAAGAACCAAAACGAGTGCACTAATGGAAATGACACTCTATGTCAAACTGTTGAAGTTGTAAAAGGTTTCCCATCTGCGGCAAGTGCTGATAACGGGAAACCTGGTAAAAGGCGGAAAGACGATGACGACGATGAGGAAGGAGGTGAAGAAGAGAGCGCATATGAGACCGACGACTCCTCCTCCCAAAAAAAGCAAAGGGTAGTTTGGTTCGGTGAGCTGCATAGGAAGTTTATTGCAGCTGTTAATCATTTGGGCTATGAAAAGGCCGTTCCTAAAAAGATCCTCGATCTAATGAACGTCGAAGGACTCACAAGAGAAAACGTCGCTAGCCATCTTCAGGCATTGATCTTTTCGTTCTTTTCGTTTATGTCTTAA

Protein sequence

MYRCRYKFNCVELMEGLVLIAFLCSNMVLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLRRKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQALIFSFFSFMS

Homology

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BLAST of CmaCh12G011720 vs. ExPASy Swiss-Prot
Match: P62598 (Two-component response regulator ARR12 OS=Arabidopsis thaliana OX=3702 GN=ARR12 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-41
Identity = 101/179 (56.42%), Postives = 124/179 (69.27%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSD + V KGV HGACDYLLKPVRIEELKNIWQHV+R
Sbjct: 75  MDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVR 134

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
            +    KN+    NG+       E V      +  +NGK  ++RKD  +++   E+E   
Sbjct: 135 SRFD--KNRGSNNNGDKRDGSGNEGV----GNSDQNNGKGNRKRKDQYNED---EDEDRD 194

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           + DDS +QKKQRVVW  ELH+KF+AAVN LGYEKA+PKKILDLMNVE LTRENVASHLQ
Sbjct: 195 DNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQ 244

[Close]

BLAST of CmaCh12G011720 vs. ExPASy Swiss-Prot
Match: A2X1N2 (Two-component response regulator ORR24 OS=Oryza sativa subsp. indica OX=39946 GN=RR24 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40
Identity = 93/180 (51.67%), Postives = 124/180 (68.89%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSA+ +T+ V KG+ HGACDYLLKPVR+E+L+ IWQHV+R
Sbjct: 87  MDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVIR 146

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGE-EESA 133
           RK   AKN+      +D   Q  + +     +  A+  K   R+  D++ ++G + +E++
Sbjct: 147 RKNCDAKNR----GNDDDAGQKAQGMNNEGESIGANRNKRQSRKSRDENGDDGDDSDENS 206

Query: 134 YETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
            E  DSS+QKK RVVW  ELHRKF+AAVN LG EKAVPKKILDLMNVE +TRENVASHLQ
Sbjct: 207 NENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENVASHLQ 262

[Close]

BLAST of CmaCh12G011720 vs. ExPASy Swiss-Prot
Match: Q6H805 (Two-component response regulator ORR24 OS=Oryza sativa subsp. japonica OX=39947 GN=RR24 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40
Identity = 93/180 (51.67%), Postives = 124/180 (68.89%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSA+ +T+ V KG+ HGACDYLLKPVR+E+L+ IWQHV+R
Sbjct: 87  MDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVIR 146

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGE-EESA 133
           RK   AKN+      +D   Q  + +     +  A+  K   R+  D++ ++G + +E++
Sbjct: 147 RKNCDAKNR----GNDDDAGQKAQGMNNEGESIGANRNKRQSRKSRDENGDDGDDSDENS 206

Query: 134 YETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
            E  DSS+QKK RVVW  ELHRKF+AAVN LG EKAVPKKILDLMNVE +TRENVASHLQ
Sbjct: 207 NENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENVASHLQ 262

[Close]

BLAST of CmaCh12G011720 vs. ExPASy Swiss-Prot
Match: O49397 (Two-component response regulator ARR10 OS=Arabidopsis thaliana OX=3702 GN=ARR10 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.7e-39
Identity = 96/179 (53.63%), Postives = 121/179 (67.60%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSD + V KGV HGACDYLLKPVRIEELKNIWQHV+ 
Sbjct: 75  MDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV- 134

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RK+   KN++  +NG                  S +  K  ++RK+  ++EE  EEE   
Sbjct: 135 RKSKLKKNKSNVSNG------------------SGNCDKANRKRKEQYEEEE--EEERGN 194

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           + DD ++QKK RV+W  ELH KF+AAV+HLG E+AVPKKILDLMNV+ LTRENVASHLQ
Sbjct: 195 DNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQ 232

[Close]

BLAST of CmaCh12G011720 vs. ExPASy Swiss-Prot
Match: B8AEH1 (Two-component response regulator ORR23 OS=Oryza sativa subsp. indica OX=39946 GN=RR23 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.8e-39
Identity = 97/185 (52.43%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LS + +T+ V KG+ HGACDYLLKPVRIEEL+NIWQHV+R
Sbjct: 82  MDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQHVIR 141

Query: 74  RKTSSAKNQN-----ECTNGNDTLCQTVEVVKGFPSAASAD-NGKPGKRRKDDDDDEEGG 133
           RK S+    N     EC   N       + V G  +  S D +G+P K+RK+   +EE  
Sbjct: 142 RKFSTRDRANLDFYEEC---NKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEEDE 201

Query: 134 EEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENV 190
            E +  + DD S+ KK RVVW  ELHRKF+AAVN LG +KAVPK+IL+LMNVE LTRENV
Sbjct: 202 GEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENV 261

[Close]

BLAST of CmaCh12G011720 vs. ExPASy TrEMBL
Match: A0A6J1HKU7 (Two-component response regulator OS=Cucurbita maxima OX=3661 GN=LOC111465471 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.0e-84
Identity = 164/179 (91.62%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR
Sbjct: 82  MDGFKLLELVGLEMDLPVIMLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 141

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY
Sbjct: 142 RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 201

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ
Sbjct: 202 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 260

[Close]

BLAST of CmaCh12G011720 vs. ExPASy TrEMBL
Match: A0A6J1FCC6 (Two-component response regulator OS=Cucurbita moschata OX=3662 GN=LOC111444330 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.0e-84
Identity = 164/179 (91.62%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR
Sbjct: 82  MDGFKLLELVGLEMDLPVIMLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 141

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY
Sbjct: 142 RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 201

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ
Sbjct: 202 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 260

[Close]

BLAST of CmaCh12G011720 vs. ExPASy TrEMBL
Match: A0A6J1CND2 (two-component response regulator ORR24-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013065 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 136/179 (75.98%), Postives = 147/179 (82.12%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V+++SAHSD ELV KGV HGACDYLLKPVRIEELKNIWQHV R
Sbjct: 86  MDGFKLLELVGLEMDLPVIMMSAHSDFELVAKGVTHGACDYLLKPVRIEELKNIWQHVFR 145

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           R   SAKNQN+CTNGN   CQTVEV KGFPS   A NGKPGKRRKD DD+EEGGEEE++Y
Sbjct: 146 RDKFSAKNQNKCTNGNKASCQTVEVAKGFPSVVGAGNGKPGKRRKDQDDNEEGGEEENSY 205

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           E DD S+QKK RV W GELHRKFIAAVNHLG EKAVPKKILDLMNVEGLTRENVASHLQ
Sbjct: 206 ENDD-STQKKPRVDWNGELHRKFIAAVNHLGIEKAVPKKILDLMNVEGLTRENVASHLQ 263

[Close]

BLAST of CmaCh12G011720 vs. ExPASy TrEMBL
Match: A0A6J1CPA6 (two-component response regulator ORR24-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013065 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 136/179 (75.98%), Postives = 147/179 (82.12%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V+++SAHSD ELV KGV HGACDYLLKPVRIEELKNIWQHV R
Sbjct: 82  MDGFKLLELVGLEMDLPVIMMSAHSDFELVAKGVTHGACDYLLKPVRIEELKNIWQHVFR 141

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           R   SAKNQN+CTNGN   CQTVEV KGFPS   A NGKPGKRRKD DD+EEGGEEE++Y
Sbjct: 142 RDKFSAKNQNKCTNGNKASCQTVEVAKGFPSVVGAGNGKPGKRRKDQDDNEEGGEEENSY 201

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           E DD S+QKK RV W GELHRKFIAAVNHLG EKAVPKKILDLMNVEGLTRENVASHLQ
Sbjct: 202 ENDD-STQKKPRVDWNGELHRKFIAAVNHLGIEKAVPKKILDLMNVEGLTRENVASHLQ 259

[Close]

BLAST of CmaCh12G011720 vs. ExPASy TrEMBL
Match: A0A5A7V8H6 (Two-component response regulator ARR12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00080 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 7.1e-62
Identity = 135/185 (72.97%), Postives = 148/185 (80.00%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHS+TELVKKGV HGACDYLLKPVRIEELKNIWQHVLR
Sbjct: 82  MDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVIHGACDYLLKPVRIEELKNIWQHVLR 141

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RK  S KNQN+  NGN+T  Q VEV KG P A S DN K GKR+KD DDDEEGGEE+S Y
Sbjct: 142 RKKPSVKNQNKSINGNNT-SQGVEVAKGCPPAVSTDNEKSGKRQKDQDDDEEGGEEDSTY 201

Query: 134 ETDDSSSQKKQRVVWFG---ELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASH 193
           E DDSS+QKK RV W+     LHRKF+AAVN LGYEKAVPKKILDLMNVEGLTRENVASH
Sbjct: 202 ENDDSSTQKKPRVNWYDGDENLHRKFVAAVNILGYEKAVPKKILDLMNVEGLTRENVASH 261

[Close]

BLAST of CmaCh12G011720 vs. NCBI nr
Match: KAG7021209.1 (Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MYRCRYKFNCVELMEGLVLIAFLCSNMVLVLSAHSDTELVKKGVFHGACDYLLKPVRIEE 60
           MYRC YKFNCVELM+GLVLIAFLCSNMVLVLSAHSDTELVKKGVFHGACDYLLKPVRIEE
Sbjct: 213 MYRCTYKFNCVELMDGLVLIAFLCSNMVLVLSAHSDTELVKKGVFHGACDYLLKPVRIEE 272

Query: 61  LKNIWQHVLRRKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDD 120
           LKNIWQHVLRRKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDD
Sbjct: 273 LKNIWQHVLRRKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDD 332

Query: 121 EEGGEEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLT 180
           EEGGEEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLT
Sbjct: 333 EEGGEEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLT 392

Query: 181 REN 184
           REN
Sbjct: 393 REN 395

[Close]

BLAST of CmaCh12G011720 vs. NCBI nr
Match: XP_023537616.1 (two-component response regulator ORR24-like [Cucurbita pepo subsp. pepo] >XP_023537617.1 two-component response regulator ORR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 164/179 (91.62%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR
Sbjct: 82  MDGFKLLELVGLEMDLPVIMLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 141

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY
Sbjct: 142 RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 201

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ
Sbjct: 202 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 260

[Close]

BLAST of CmaCh12G011720 vs. NCBI nr
Match: XP_022965632.1 (two-component response regulator ORR24-like [Cucurbita maxima] >XP_022965633.1 two-component response regulator ORR24-like [Cucurbita maxima] >XP_022965634.1 two-component response regulator ORR24-like [Cucurbita maxima])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 164/179 (91.62%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR
Sbjct: 82  MDGFKLLELVGLEMDLPVIMLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 141

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY
Sbjct: 142 RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 201

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ
Sbjct: 202 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 260

[Close]

BLAST of CmaCh12G011720 vs. NCBI nr
Match: XP_022938161.1 (two-component response regulator ORR24-like [Cucurbita moschata] >XP_022938162.1 two-component response regulator ORR24-like [Cucurbita moschata])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 164/179 (91.62%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR
Sbjct: 82  MDGFKLLELVGLEMDLPVIMLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 141

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY
Sbjct: 142 RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 201

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ
Sbjct: 202 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 260

[Close]

BLAST of CmaCh12G011720 vs. NCBI nr
Match: KAG6586362.1 (Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-83
Identity = 163/179 (91.06%), Postives = 168/179 (93.85%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR
Sbjct: 66  MDGFKLLELVGLEMDLPVIMLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 125

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RKTSSAKNQNECTNGNDTLC TVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY
Sbjct: 126 RKTSSAKNQNECTNGNDTLCPTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 185

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ
Sbjct: 186 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 244

[Close]

BLAST of CmaCh12G011720 vs. TAIR 10
Match: AT2G25180.1 (response regulator 12 )

HSP 1 Score: 171.4 bits (433), Expect = 7.3e-43
Identity = 101/179 (56.42%), Postives = 124/179 (69.27%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSD + V KGV HGACDYLLKPVRIEELKNIWQHV+R
Sbjct: 75  MDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVR 134

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
            +    KN+    NG+       E V      +  +NGK  ++RKD  +++   E+E   
Sbjct: 135 SRFD--KNRGSNNNGDKRDGSGNEGV----GNSDQNNGKGNRKRKDQYNED---EDEDRD 194

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           + DDS +QKKQRVVW  ELH+KF+AAVN LGYEKA+PKKILDLMNVE LTRENVASHLQ
Sbjct: 195 DNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQ 244

[Close]

BLAST of CmaCh12G011720 vs. TAIR 10
Match: AT4G31920.1 (response regulator 10 )

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-40
Identity = 96/179 (53.63%), Postives = 121/179 (67.60%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V++LSAHSD + V KGV HGACDYLLKPVRIEELKNIWQHV+ 
Sbjct: 75  MDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV- 134

Query: 74  RKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAY 133
           RK+   KN++  +NG                  S +  K  ++RK+  ++EE  EEE   
Sbjct: 135 RKSKLKKNKSNVSNG------------------SGNCDKANRKRKEQYEEEE--EEERGN 194

Query: 134 ETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
           + DD ++QKK RV+W  ELH KF+AAV+HLG E+AVPKKILDLMNV+ LTRENVASHLQ
Sbjct: 195 DNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQ 232

[Close]

BLAST of CmaCh12G011720 vs. TAIR 10
Match: AT4G16110.1 (response regulator 2 )

HSP 1 Score: 147.9 bits (372), Expect = 8.7e-36
Identity = 90/186 (48.39%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V+++SA     +V KGV HGA DYL+KPVRIE LKNIWQHV+R
Sbjct: 86  MDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVR 145

Query: 74  RK------TSSAKNQNECTNGN-DTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEG 133
           +K      +  +    E T G+ D   Q  E      S+ +  NG+  ++RK+++ D++G
Sbjct: 146 KKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQG 205

Query: 134 GEEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTREN 190
            ++E      DSSS KK RVVW  ELH++F+AAVN LG +KAVPKKIL++MNV GLTREN
Sbjct: 206 DDKE------DSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTREN 265

[Close]

BLAST of CmaCh12G011720 vs. TAIR 10
Match: AT5G58080.1 (response regulator 18 )

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 80/163 (49.08%), Postives = 104/163 (63.80%), Query Frame = 0


Query: 28  VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLRRKTSSAKNQNECTNGND 87
           V++LSAHSD + V KG+ HGACDYL+KPV ++EL+NIW HV+++   S       +  + 
Sbjct: 75  VIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKNIKSYAKLLPPSESDS 134

Query: 88  TLCQTVEVVKGFPSAASADNGKPGKRRKDDDDD-EEGGEEESAYETDDSSSQKKQRVVWF 147
                       PSA+     K      +DD D EE   E S  + D S ++KK RVVW 
Sbjct: 135 V-----------PSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSGTRKKPRVVWS 194

Query: 148 GELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENVASHLQ 190
            ELH+KF++AV  LG +KAVPKKILDLM++EGLTRENVASHLQ
Sbjct: 195 QELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQ 226

[Close]

BLAST of CmaCh12G011720 vs. TAIR 10
Match: AT3G16857.1 (response regulator 1 )

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 85/197 (43.15%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 14  MEGLVLIAFLCSNM---VLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLR 73
           M+G  L+  +   M   V+++SA     +V KGV HGA DYL+KPVR+E LKNIWQHV+R
Sbjct: 95  MDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVR 154

Query: 74  RKTSS----------------AKNQNECTNGNDTLCQTVEVVKGFPSAASADNG--KPGK 133
           ++ S                  + Q+    G   +    + V    S+ +  N      +
Sbjct: 155 KRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSR 214

Query: 134 RRKDDDDDEEGGEEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILD 190
           +RKD++ +E+G +++     +D+S+ KK RVVW  ELH++F+AAVN LG EKAVPKKIL+
Sbjct: 215 KRKDEEGEEQGDDKD-----EDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILE 274

The following BLAST results are available for this feature:

BLAST of CmaCh12G011720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62598	1.0e-41	56.42	Two-component response regulator ARR12 OS=Arabidopsis thaliana OX=3702 GN=ARR12 ...	[more]
A2X1N2	1.5e-40	51.67	Two-component response regulator ORR24 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q6H805	1.5e-40	51.67	Two-component response regulator ORR24 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
O49397	3.7e-39	53.63	Two-component response regulator ARR10 OS=Arabidopsis thaliana OX=3702 GN=ARR10 ...	[more]
B8AEH1	4.8e-39	52.43	Two-component response regulator ORR23 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]

BLAST of CmaCh12G011720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKU7	3.0e-84	91.62	Two-component response regulator OS=Cucurbita maxima OX=3661 GN=LOC111465471 PE=...	[more]
A0A6J1FCC6	3.0e-84	91.62	Two-component response regulator OS=Cucurbita moschata OX=3662 GN=LOC111444330 P...	[more]
A0A6J1CND2	1.1e-65	75.98	two-component response regulator ORR24-like isoform X1 OS=Momordica charantia OX...	[more]
A0A6J1CPA6	1.1e-65	75.98	two-component response regulator ORR24-like isoform X2 OS=Momordica charantia OX...	[more]
A0A5A7V8H6	7.1e-62	72.97	Two-component response regulator ARR12-like OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmaCh12G011720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021209.1	1.4e-96	98.91	Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_023537616.1	6.2e-84	91.62	two-component response regulator ORR24-like [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022965632.1	6.2e-84	91.62	two-component response regulator ORR24-like [Cucurbita maxima] >XP_022965633.1 t...	[more]
XP_022938161.1	6.2e-84	91.62	two-component response regulator ORR24-like [Cucurbita moschata] >XP_022938162.1...	[more]
KAG6586362.1	3.1e-83	91.06	Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of CmaCh12G011720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25180.1	7.3e-43	56.42	response regulator 12	[more]
AT4G31920.1	2.6e-40	53.63	response regulator 10	[more]
AT4G16110.1	8.7e-36	48.39	response regulator 2	[more]
AT5G58080.1	1.4e-33	49.08	response regulator 18	[more]
AT3G16857.1	1.2e-32	43.15	response regulator 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 136..192 e-value: 2.5E-26 score: 93.4
None	No IPR available	GENE3D	3.40.50.2300		coord: 14..115 e-value: 3.0E-10 score: 42.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..136
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 28..189
None	No IPR available	PANTHER	PTHR43874:SF7	TWO-COMPONENT RESPONSE REGULATOR	coord: 28..189
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 140..190 e-value: 2.8E-22 score: 76.8
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 1..69 score: 15.445098
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 24..80
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 138..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G011720.1	CmaCh12G011720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0016301	kinase activity