CmaCh12G010780 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCTTCTTCTTCCTTCTCTCTCTTTGGCGTTTTCGCCATTGCCTTCCTCGTCTTCGGCTCCTCTCCTGTTCTCTCCTTTAAAGGTACAGTTTCCTCTCCCTCTCTCATGCTTTTCTGGGTTCGTGTTTCTTTCCGTTTTTCATTTAGGAATTTCTTGTTGAAGGGTCACTAGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTCGTAAATACATGTATGACTAGATACATGTGTTGAAGGATCACGAGTAGATACATATGTTGAAGGGTCACTCATAAATACATGTGTTGAAGGGTCACTCGTAGATACATGTGTTGAACGGTCATTAGTAGATACATGTATGACTAGATACATGTGTTGAAGGGTCATCAGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTCATAAATACATGTGTTGAAGGGTCACTCGTAGATACATGTGTTGAACGGTCATTAGTAGATACATGTATGACTAGATACATGTGTTGAAGGGTCACCAGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCTTGTACATGTATAGATACATGTATAAGTACGTGTATGAATAGATATATGTAGGTTCATTCGTTCCTAATTAAATAGATGCATGACTTTTGGATAATGAATGGTAACGGAGAATGTCCAAAATTACCTATATGTATGTTGGTATTGGTGGAAGAAGTAGAAAATCAATCAAGCATTTCTTCATAGTTTTACAAAATTCTCCTCTCAAAGAATTCTACCAAATTTCTCTCTTCATCACCAACATTTCTATATATATGTATATCACCAACATTTCTATATATATGTATATCCATCAGAATTTCTAACCAGAACCAGAGATGGGGGATTGAAAAAACCAAGAAAAAGGCATTTTTCTCTAGGAATTTATATGGAAATGACAGTCTGAGCATTGAAGCAATCAAAAACCTTCCAATTTTGGGAACATAACAATGAATTTGTTCCTTCATTGCTATCAATCTGTACAAAACTTGTAAGAATATCTTAGATAACTGTTTTTTAATCTAATCTGATACAAAATACTTCTCTATTTGATAGGGATGATTAGATGAACACGACTCTTTATAATTGTATGATATTGTCTACTTAACTTCCAAAAGACTTCATACCAATAGATATAGTATTCCTTGATATTATAAACCCATGATCATTTCTTAAATTAACCGATGTAGGACTTTCATCATCCAACACCTCCCTTCAAACAAAGTATGCCTCCCCTTAATCGAGGCTCAACTCCTTTTTTTTTTGGAGTCCTTTGTTCGACATTTGAGAATTTACCAATCTATTGGCACGATTAAGTTTAGGGCATGGCTCTAATACCATATTAGATGAACACGACTCTTCACAATAGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGACTTTGCTTTGGACTTTCCCAAAAGGTCTCACACCAATGGAGATAGTATTCCTTGATTATAAATCCATTATCATTCCCTAAGTCGGCTCTCGAATTTTTATCATCCAATAAGTACTTCAAATGAAATTAAATCTTTTGATTAAGAAAATTAAAAACAATCAAACAAGCTCTTCAAACATGGAGGACAACAGTCTGCAAATGAATGCTCTGAAAATAATTTGCCAATTACCTGACTGCAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTGCTGCATCGCAGACAAAATCGCCGACGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATCGCGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGCGTGCCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGATCGGTGGTGGCTTCAATGGGAGCATCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGAGATGGTGAAAGTGTTCTCAGATTTGGC ATGGCTTCTTCTTCTTCTTCCTTCTCTCTCTTTGGCGTTTTCGCCATTGCCTTCCTCGTCTTCGGCTCCTCTCCTGTTCTCTCCTTTAAAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTGCTGCATCGCAGACAAAATCGCCGACGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATCGCGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGCGTGCCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGATCGGTGGTGGCTTCAATGGGAGCATCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGAGATGGTGAAAGTGTTCTCAGATTTGGC ATGGCTTCTTCTTCTTCTTCCTTCTCTCTCTTTGGCGTTTTCGCCATTGCCTTCCTCGTCTTCGGCTCCTCTCCTGTTCTCTCCTTTAAAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTGCTGCATCGCAGACAAAATCGCCGACGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATCGCGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGCGTGCCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGATCGGTGGTGGCTTCAATGGGAGCATCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA MASSSSSFSLFGVFAIAFLVFGSSPVLSFKVEEDKENLLQGLNGYRQAQKLPPFEKNAKACCIADKIADVDKDHPCNITTANSTVTARHLSQIANFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGASVLVVLLGLFLVGNL Homology
BLAST of CmaCh12G010780 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26 Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 0
BLAST of CmaCh12G010780 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22 Identity = 59/177 (33.33%), Postives = 102/177 (57.63%), Query Frame = 0
BLAST of CmaCh12G010780 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 3.2e-19 Identity = 60/167 (35.93%), Postives = 93/167 (55.69%), Query Frame = 0
BLAST of CmaCh12G010780 vs. ExPASy Swiss-Prot
Match: Q8GUL8 (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 8.0e-10 Identity = 56/173 (32.37%), Postives = 79/173 (45.66%), Query Frame = 0
BLAST of CmaCh12G010780 vs. ExPASy TrEMBL
Match: A0A6J1HN14 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111465672 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.0e-104 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CmaCh12G010780 vs. ExPASy TrEMBL
Match: A0A6J1FD58 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita moschata OX=3662 GN=LOC111444309 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.4e-96 Identity = 188/199 (94.47%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of CmaCh12G010780 vs. ExPASy TrEMBL
Match: A0A6J1KEG4 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111493609 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 6.7e-60 Identity = 128/194 (65.98%), Postives = 152/194 (78.35%), Query Frame = 0
BLAST of CmaCh12G010780 vs. ExPASy TrEMBL
Match: A0A6J1G4I7 (uncharacterized GPI-anchored protein At3g06035 OS=Cucurbita moschata OX=3662 GN=LOC111450734 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 6.3e-58 Identity = 126/197 (63.96%), Postives = 153/197 (77.66%), Query Frame = 0
BLAST of CmaCh12G010780 vs. ExPASy TrEMBL
Match: A0A6J1DAZ7 (uncharacterized GPI-anchored protein At3g06035 OS=Momordica charantia OX=3673 GN=LOC111018803 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 8.5e-55 Identity = 122/197 (61.93%), Postives = 154/197 (78.17%), Query Frame = 0
BLAST of CmaCh12G010780 vs. NCBI nr
Match: XP_022965946.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]) HSP 1 Score: 388.3 bits (996), Expect = 4.1e-104 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CmaCh12G010780 vs. NCBI nr
Match: XP_023536945.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97 Identity = 190/199 (95.48%), Postives = 194/199 (97.49%), Query Frame = 0
BLAST of CmaCh12G010780 vs. NCBI nr
Match: KAG6586269.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96 Identity = 190/200 (95.00%), Postives = 193/200 (96.50%), Query Frame = 0
BLAST of CmaCh12G010780 vs. NCBI nr
Match: XP_022938132.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata]) HSP 1 Score: 360.9 bits (925), Expect = 7.0e-96 Identity = 188/199 (94.47%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of CmaCh12G010780 vs. NCBI nr
Match: KAG7021112.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 324.3 bits (830), Expect = 7.3e-85 Identity = 163/169 (96.45%), Postives = 166/169 (98.22%), Query Frame = 0
BLAST of CmaCh12G010780 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 159.1 bits (401), Expect = 3.8e-39 Identity = 90/191 (47.12%), Postives = 128/191 (67.02%), Query Frame = 0
BLAST of CmaCh12G010780 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27 Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 0
BLAST of CmaCh12G010780 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23 Identity = 59/177 (33.33%), Postives = 102/177 (57.63%), Query Frame = 0
BLAST of CmaCh12G010780 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 96.7 bits (239), Expect = 2.3e-20 Identity = 60/167 (35.93%), Postives = 93/167 (55.69%), Query Frame = 0
BLAST of CmaCh12G010780 vs. TAIR 10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 65.5 bits (158), Expect = 5.7e-11 Identity = 56/173 (32.37%), Postives = 79/173 (45.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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