CmaCh12G009990 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G009990
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CASP-like protein
Location	Cma_Chr12: 7989738 .. 7993860 (-)
RNA-Seq Expression	CmaCh12G009990
Synteny	CmaCh12G009990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTTGTGGGTTTTGGCCAACCAGCACTCATAAATAAAGGCCAAACCCCCAACTGACCACTGTAGAAGAGGTGACAATGGGGTTTTGGGATCAAAAAACTGAAGGGATTCTCAGATCCTTTGCGATCATTGGCTTGGTTTTAACTGTTCTTTTGTTGGGTTTTGATAAGCAAACTACCCAAATCTTTCATATCGACAAGAAGGCCTCTTTCAGAAGTTTGCATGCTTTTGTGTAAGCCCTTTCTCTCTCATTTTTCAAACTCTTTCTCGTTTTCGTTCTTGATCTTTTAGGTTTCGTGTTTTAAAGTTTTGATGAACGGGAGATTTGAACTCTGAGATTCCACATCGATTGGGGAGGAGAACGAAACACCCTTTATAAGTGTGTGGAAACCTTTCCGTAACAACGCATTTTAAAAACCTTGAGGGGATGTCCGAGAAGGAAAACCCAAAAAAGACAATATTTGCTAGCCGTAGGCTTGGACGGTTACAAATAGTATTAGAGTTAGATACCGGACGATCTACCAGGTAGAAGGTTGTAACTTGAAGGGGGTAGACATAAGGCAATGTGCCAGTAAAGACACTGGGTCTCGAAGGGGATGAATTTGGTGGAGGTCTCACATTGATCAAAGAAATGAACGAGTGCCAACGAGGACGCTGGGCCCTGAAAGGCGGTGAATTGTGAGATTCCACGTTGGTTGAGAAGGATAACAAAAGGTTGTTCCCCGAAGGAGGTAGACACGAAGCGATGCGCCAGTAAGGACGCTGGGTCTCGAGGGAGAGTGGATTTGGTGGGGTCTCACATCGATTGGAGAAAGGCTTGAGTTCGAGCAAGGACACTAGGCCCTAAAGGATTGAATTGTGAGGTCTGTTAAGGATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAATATTTGCTTTATTATCATAGGTATCTTTCCATTTATTGTTATTTCCATTTATTACTATTTTCATATTCTTGTAATTCATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACATGGTATCAGAGCCATTTCGGTTTAACAACCCTGATCCTTTCTTTTCAATGGCTTTTGAATCCTTTAATCTTCTTCTCCACCACCCCTGCTGGTTTTGACGCCGCAGGGGCAGTCTTCATGGCTGCCGTAGTCGGAGCCGATTGATTACTCTTCGGCTCCACCCTATTGACCTCCAAATCACCTTTCGTCATACTCTGTACATACAACCTTACCTTTTCCAACCCAATCGGTTTTCCCCTTGGCCAATATAGTCTCTCTCATTTTCTTCCCAATCAACCTTCATCCTTCACATAAACTCTAACCTAAACCTATCAACCTTTTGCAGAGATTTACCTTCGGAATCTGGGTGCCGCACTGGCCTATTCGCCAACCAAGTTGCCGCCGCCCTTCCTGCCAAAATTGGCTTCTTCGCCTGATGAGGCGACTCTTCCGACTGCCCTTCTCGCCAAAATTGGCTCCTTCGCCCAATGTGGCGACTCTTCCGGCTTCAACATTGTCTTTGTCCCTTGCTCTAGGTTTCCCCTTCTACTTCTTGGGGTTAGAAATATTCTCACCAGAGCCAAGGCAGCATCGTCGCTAAGCGACAATCCCTCTTCATGGGTTAGACATATTCTCGCCGAAGCCAAGGCAGCATCGCCGCTGAGCGGCGATTCCTCTGCAATTTTTGATGGCCAAGAACCGGGTTGTTAGCATCTTCATGAAAAGTGTTTCTCAACCTCTTTGAATTTTTCAGATTCAAGCTTCACGTTCGTTTAAATCCGACGCTTAGCTTGCGGTGGGGTGTTAAGGATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAATATTTGCTTTATTATCATAGGTATCTTTCCATTTATTGTTATTTCCATTTATTACTATTTTCATATTCTTGTAATTCATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACAAGGTCCCACATCGATTGGGGAGGAACGAAACACTCTTTACACGAACAAATAAATGTCAAAAGTTTCCTTGGATGACCAATGAAACTCATGAAAGAACGTTTATAAGTTAAATTTTCAGAAATCAAATGATTATCGAATCGAGTTTAAAGTTATTCGATTTTCTTGTCATGGTGACAGAGTGATTATGTATGTGGACTCCCTAGCAGCTGCCTACAACATTCTTCAAATCTGCAACTGTTGGATTTCAGCTCAGCCAAAAGGAACATCCAAATTAGGGAGTGGTTCTCATATATGCCTATTTTGGGCTTCTTTCTTGCTTGACCAGGTATGTCTTAATTTCTCTTTACTTATCTTCCAATTTTTAGTACTAATATGGATAAATTTAGGTCTAAAAATCTCGGCTAGTGAGACGAGCGGACTAGACTCGTCTTACAAACTTAGTTACATGAATCTAATCATCAAACTAAAAGACTTTAAAGATTATCACGAGTTTTTATCTCTTTCTATATTAAATATAATAGCCTTAGATATTATCTGCTTTGATCCATTACGTATATCCGTTAAATTTACCGTCTTTAATATTAGTTTCGAAGAAAAATGTTTTTAATAGCTCTCGCTTGAGGTAGATGGACTGTTCCAACCTGAGGCTATGGAGGAAAAGGACACCGACAAGTGGACAAGAAACTAGCTGATGAAACTAACAAACATTTAAGAAAGTTCTAAGCTATGTTAGACTTCCAAAACTTTTCATAACCAAATCCAAACATTTAAATTTAATCTCAACATCTCAATATTTTTTTTTTTAATTATACATTAATTTTCATTAATAAATATTTAAATTAGTTCGTAATAATAAACTTTTGGGTATCATACTTCAGATGAAAAATTAGGTCACTTATTCGAAGAAGATTTATTAGTACTTCAAAGTTTATAAAAATTAAAATTTGAGTGAACAAGAACAAATTAATCAAATTCGAAAAAGTGAAAATCTTGTCTACTTTTAACCATTTGAGCTTAGTCTCGAGATTTTTTTTATTAGTCGGTTCTACCCATAACTATTGAACTCCTTTCCTTTAAACTACAATCTTTCAGAAAAAAATCATAGTTGAACTAGTTCTCCTTTAACTATTATCGGAAAAGACTTTCTTTGGGTTGTAGGCAGTAAATATAGACTTGAATTCTACGGTAGAGAGAGAAGTATATTCCTTATGCTCTAGGACACATCCATTACTCTCGAGTGCTTTTTCTTAAGCTAATCCTCTTTTAGAAGCTTGAACAGTTTGAGTGTTAGATATAGGATCACGATAGCATTATCAATAGTAGTACTTCGTAAATTCTTATATAATCCTCGAAAGATATGAAATTCTATTATGATTCATAAAAATAAAAAATAAAATTTTGGCGAGAATATTTTTCATTTAATGAAAATTCGTAAAAAAAAACTTGATTATTAATACATAAATTATATAGAAAGAGGTCAGGAATTTGAATCATCCATCTTGAACTGAGAGAGGACTAAACTTAAAACAAACAAATAAATAAATAAAAGTTGTCTCAACCATGGGTCGAACCGTCCCAAACATGTTTTATTATGTGCAAACATCCAACTTAAAGTGGTTTGAAGTGGCATTGACAGGCAGTGGCGTACCTCGTATTTGCCGCAAACACGGCGGGGATGGAGGCGGCGCTTCTGGCGGTGACCGGCGCACATGACTTTCAATGGATGAAGCTCTGCAACAGATTCGAGAGATTCTGCTACCAAGTCGGCGGTGCTTTTCTTTGTGGCTATGGAGCTTTTTTTGCAATGTGTGCCATTTGCGTTATCTCTTCTTTCAACTTGTTTAGGCATTATTTACCAAACCTTTTCTTTCGACTAAAATCCAACGAGTGAATTGTTCGATACCGACATCGAGACCTTGTAACTTTACCAAGTCTATAAATTGTATTCATATCTGTATGTTGAAGACATTTAGATCGATACACACTATCTTTATTAAAACGGATCTTTTGAACAAGGTTTAAATAGAATAATAAAATAC

mRNA sequence

GAGTTGTGGGTTTTGGCCAACCAGCACTCATAAATAAAGGCCAAACCCCCAACTGACCACTGTAGAAGAGGTGACAATGGGGTTTTGGGATCAAAAAACTGAAGGGATTCTCAGATCCTTTGCGATCATTGGCTTGGTTTTAACTGTTCTTTTGTTGGGTTTTGATAAGCAAACTACCCAAATCTTTCATATCGACAAGAAGGCCTCTTTCAGAAGTTTGCATGCTTTTGTAGTGATTATGTATGTGGACTCCCTAGCAGCTGCCTACAACATTCTTCAAATCTGCAACTGTTGGATTTCAGCTCAGCCAAAAGGAACATCCAAATTAGGGAGTGGTTCTCATATATGCCTATTTTGGGCTTCTTTCTTGCTTGACCAGGCAGTGGCGTACCTCGTATTTGCCGCAAACACGGCGGGGATGGAGGCGGCGCTTCTGGCGGTGACCGGCGCACATGACTTTCAATGGATGAAGCTCTGCAACAGATTCGAGAGATTCTGCTACCAAGTCGGCGGTGCTTTTCTTTGTGGCTATGGAGCTTTTTTTGCAATGTGTGCCATTTGCGTTATCTCTTCTTTCAACTTGTTTAGGCATTATTTACCAAACCTTTTCTTTCGACTAAAATCCAACGAGTGAATTGTTCGATACCGACATCGAGACCTTGTAACTTTACCAAGTCTATAAATTGTATTCATATCTGTATGTTGAAGACATTTAGATCGATACACACTATCTTTATTAAAACGGATCTTTTGAACAAGGTTTAAATAGAATAATAAAATAC

Coding sequence (CDS)

ATGGGGTTTTGGGATCAAAAAACTGAAGGGATTCTCAGATCCTTTGCGATCATTGGCTTGGTTTTAACTGTTCTTTTGTTGGGTTTTGATAAGCAAACTACCCAAATCTTTCATATCGACAAGAAGGCCTCTTTCAGAAGTTTGCATGCTTTTGTAGTGATTATGTATGTGGACTCCCTAGCAGCTGCCTACAACATTCTTCAAATCTGCAACTGTTGGATTTCAGCTCAGCCAAAAGGAACATCCAAATTAGGGAGTGGTTCTCATATATGCCTATTTTGGGCTTCTTTCTTGCTTGACCAGGCAGTGGCGTACCTCGTATTTGCCGCAAACACGGCGGGGATGGAGGCGGCGCTTCTGGCGGTGACCGGCGCACATGACTTTCAATGGATGAAGCTCTGCAACAGATTCGAGAGATTCTGCTACCAAGTCGGCGGTGCTTTTCTTTGTGGCTATGGAGCTTTTTTTGCAATGTGTGCCATTTGCGTTATCTCTTCTTTCAACTTGTTTAGGCATTATTTACCAAACCTTTTCTTTCGACTAAAATCCAACGAGTGA

Protein sequence

MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFRLKSNE

Homology

[Close]

BLAST of CmaCh12G009990 vs. ExPASy Swiss-Prot
Match: B9IM09 (CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 4.6e-44
Identity = 92/176 (52.27%), Postives = 119/176 (67.61%), Query Frame = 0


Query: 7   KTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNI 66
           K E ILR  AI+ LV T  L+G D QT  +   +K+ +++ LHA VV++YVD++AAAYN+
Sbjct: 7   KIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAAAYNL 66

Query: 67  LQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAH 126
           LQ+C C +SA  KG  K   GS+  L WA F+LDQ  AY  FAA++A ++ ++L +TGA 
Sbjct: 67  LQLCRCSVSALSKGNFK---GSYRYLSWACFVLDQLAAYTTFAAHSAALQHSVLGITGAK 126

Query: 127 DFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFRLK 183
            FQWMK CNRF RFC+Q+GGA  CGY A   M  I  IS+FNLFR Y P  F RLK
Sbjct: 127 VFQWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLK 179

[Close]

BLAST of CmaCh12G009990 vs. ExPASy Swiss-Prot
Match: Q5K4H9 (CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-42
Identity = 89/177 (50.28%), Postives = 116/177 (65.54%), Query Frame = 0


Query: 6   QKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYN 65
           QK E ++R   I+ LVLT  L+G D QT  IF++ KKASF+ L A V ++Y+ SLAAAYN
Sbjct: 6   QKIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAAAYN 65

Query: 66  ILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 125
           +LQ+C    SA  KGTS     S+  L W  ++LDQAV Y VFA N A +E + L +TG 
Sbjct: 66  LLQLCCSSFSASYKGTS---LQSYAYLAWLRYILDQAVVYAVFAGNLAALEHSFLVLTGE 125

Query: 126 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFRLK 183
            +FQW+K CN++ RFC Q+GG+ LCG+ A   M +I  IS+FNLFR Y P  F  LK
Sbjct: 126 ENFQWLKWCNKYTRFCTQIGGSLLCGFVASLLMFSIASISAFNLFRQYSPTKFMHLK 179

[Close]

BLAST of CmaCh12G009990 vs. ExPASy Swiss-Prot
Match: A7Q6G6 (CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-41
Identity = 94/177 (53.11%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 7   KTEGILRSFAIIGLVLTVLLLGFDKQTTQIFH-IDKKASFRSLHAFVVIMYVDSLAAAYN 66
           + E  LR FAI+ LVLT  LLGFD QT  +F  I K A+FR L A  V++YVDS+AA YN
Sbjct: 30  RAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSVAAGYN 89

Query: 67  ILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 126
           +LQ+   +ISA+ KG  KL + S++ L W  FLLDQA  Y VF+ANTA ++A+++AVTG 
Sbjct: 90  LLQLGRGFISAKLKG--KLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASIIAVTGE 149

Query: 127 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFRLK 183
              QWMK+CNR+ RFC QVGGA L GY A   M  +  +S+F+LFR Y P  F  LK
Sbjct: 150 SSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFHLLK 204

[Close]

BLAST of CmaCh12G009990 vs. ExPASy Swiss-Prot
Match: C6SZ04 (CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.6e-36
Identity = 81/176 (46.02%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 9   EGILRSFAIIGLVLTVLLLGFDKQTTQIF-HIDKKASFRSLHAFVVIMYVDSLAAAYNIL 68
           E  LR  AI+ LVLT  L+  D QT  +F  I+KKA+++ L+A  +++YV   AA YN+L
Sbjct: 9   EVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTCAAAGYNLL 68

Query: 69  QICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAHD 128
            +C   I ++     K   GS++C+ W  F LDQ   Y+ FAANTA M AA+LA++G+  
Sbjct: 69  LLCKHSIWSR-----KNFKGSYLCMAWICFSLDQIAVYMTFAANTATMGAAVLAISGSEA 128

Query: 129 FQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFRLKS 184
           FQW+K+C++F RFC ++GGA LCGY A   M  I  IS++ +FR Y P  F RLKS
Sbjct: 129 FQWLKVCDKFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPKWFLRLKS 179

[Close]

BLAST of CmaCh12G009990 vs. ExPASy Swiss-Prot
Match: Q8L8U9 (CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.0e-32
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 6   QKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYN 65
           ++TE ILR   +  L+LT  L+G D QT +I +I K  SFR L A    +Y+D + AAYN
Sbjct: 5   RETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYN 64

Query: 66  ILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 125
           ++Q+   W + + K ++           W S+LLDQ  AY+VFA  +A  + +LL VTG+
Sbjct: 65  LVQLGLGWYNVEQKTSNPK---------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGS 124

Query: 126 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFRLKSN 185
            + QWMK C +F RFC+Q+G A +  Y A   M  +  IS+FNLFR Y P  FFR KS+
Sbjct: 125 RELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

[Close]

BLAST of CmaCh12G009990 vs. ExPASy TrEMBL
Match: A0A6J1HQ91 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 8.5e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL
Sbjct: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL
Sbjct: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180

Query: 181 LKSNE 186
           LKSNE
Sbjct: 181 LKSNE 185

[Close]

BLAST of CmaCh12G009990 vs. ExPASy TrEMBL
Match: A0A6J1FCZ2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGFWDQ+TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQIC CWISA PKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL
Sbjct: 61  AAAYNILQICKCWISAHPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHY PNLFFR
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKSNE 186
           LKSNE
Sbjct: 181 LKSNE 185

[Close]

BLAST of CmaCh12G009990 vs. ExPASy TrEMBL
Match: A0A0A0LK62 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.2e-74
Identity = 142/184 (77.17%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGF D KTEGILR  AII LVL+VLLLGFDK+T QIFH+DKKASF+SL A V+I+YVDS+
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AA YNILQ+C CWI AQPKG SKLG+  HI LFW SF LDQ  AYL FA+NTAGMEAALL
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AVTGAHDFQWMKLCNRF RFCYQVGGAFLCGY AFFA+  I  IS+FNLFRHY PN F R
Sbjct: 121 AVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFLR 180

Query: 181 LKSN 185
           LKS+
Sbjct: 181 LKSS 184

[Close]

BLAST of CmaCh12G009990 vs. ExPASy TrEMBL
Match: A0A6J1DH36 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.8e-67
Identity = 130/185 (70.27%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 1   MGFW-DQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDS 60
           MGF+ D +TEGILR  AIIGL+LTV LLGFDKQTTQIFH+DKKA+FRSL + +VIMYV+S
Sbjct: 1   MGFFGDPRTEGILRFCAIIGLILTVCLLGFDKQTTQIFHVDKKATFRSLRSLIVIMYVNS 60

Query: 61  LAAAYNILQICNCWISAQPK-GTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAA 120
           +AA YN+LQ+C CWISAQPK G SKLG+   I +FW SF LDQA+AY++FAANTAG+EAA
Sbjct: 61  VAAGYNLLQLCKCWISAQPKLGASKLGAHYDIYIFWISFFLDQAIAYVIFAANTAGVEAA 120

Query: 121 LLAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLF 180
           LLA+TGA++ QWMKLCNRF RFC+Q GGAFLCGY A   M AI  IS+FNLF HY P+ F
Sbjct: 121 LLAITGAYNLQWMKLCNRFTRFCFQAGGAFLCGYAASLTMAAISFISAFNLFTHYSPSHF 180

Query: 181 FRLKS 184
            R KS
Sbjct: 181 LRPKS 185

[Close]

BLAST of CmaCh12G009990 vs. ExPASy TrEMBL
Match: A0A6J1KBE1 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492374 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.5e-61
Identity = 123/184 (66.85%), Postives = 140/184 (76.09%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGF D +TEGILR  A+I LV TV L+GFDK+TTQIF  DK ASF+SL A  VIMYVDS+
Sbjct: 1   MGFGDARTEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSI 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQ+  CWISA PK   +L +  H+ LFW SFL+DQA AYL FAANTAG+EAA +
Sbjct: 61  AAAYNILQLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFV 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AV G  +FQWMKLCNRF RFCYQ  GAFLCGY AF  M  I  +S+FNLF+HY PN F  
Sbjct: 121 AVRGNQEFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNHFLH 180

Query: 181 LKSN 185
           LKSN
Sbjct: 181 LKSN 184

[Close]

BLAST of CmaCh12G009990 vs. NCBI nr
Match: XP_022965970.1 (CASP-like protein 2C1 [Cucurbita maxima])

HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL
Sbjct: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL
Sbjct: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180

Query: 181 LKSNE 186
           LKSNE
Sbjct: 181 LKSNE 185

[Close]

BLAST of CmaCh12G009990 vs. NCBI nr
Match: XP_023537147.1 (CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like protein 2C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021022.1 CASP-like protein 2C1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373.6 bits (958), Expect = 9.7e-100
Identity = 182/185 (98.38%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGFWDQ+TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQIC CWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL
Sbjct: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHY PNLFFR
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKSNE 186
           LKSNE
Sbjct: 181 LKSNE 185

[Close]

BLAST of CmaCh12G009990 vs. NCBI nr
Match: XP_022938059.1 (CASP-like protein 2C1 [Cucurbita moschata])

HSP 1 Score: 371.7 bits (953), Expect = 3.7e-99
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGFWDQ+TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQIC CWISA PKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL
Sbjct: 61  AAAYNILQICKCWISAHPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHY PNLFFR
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKSNE 186
           LKSNE
Sbjct: 181 LKSNE 185

[Close]

BLAST of CmaCh12G009990 vs. NCBI nr
Match: XP_004149074.1 (CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021217 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-74
Identity = 142/184 (77.17%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGF D KTEGILR  AII LVL+VLLLGFDK+T QIFH+DKKASF+SL A V+I+YVDS+
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AA YNILQ+C CWI AQPKG SKLG+  HI LFW SF LDQ  AYL FA+NTAGMEAALL
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AVTGAHDFQWMKLCNRF RFCYQVGGAFLCGY AFFA+  I  IS+FNLFRHY PN F R
Sbjct: 121 AVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFLR 180

Query: 181 LKSN 185
           LKS+
Sbjct: 181 LKSS 184

[Close]

BLAST of CmaCh12G009990 vs. NCBI nr
Match: XP_038889630.1 (CASP-like protein 2C1 [Benincasa hispida])

HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69
Identity = 136/184 (73.91%), Postives = 147/184 (79.89%), Query Frame = 0


Query: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGF + +TEGILR  AI  LVL+V LLGFDKQTTQIFHIDKKASFRSL A V+I+YVDS+
Sbjct: 1   MGFGNVRTEGILRFCAIFLLVLSVCLLGFDKQTTQIFHIDKKASFRSLRALVIIIYVDSM 60

Query: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
            A YNILQIC CWI AQPKG SKLG    I LFW SF LDQA  YL FAANTAGMEA+ L
Sbjct: 61  VAGYNILQICKCWIFAQPKGISKLGGHFDIYLFWLSFFLDQAAVYLTFAANTAGMEASFL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180
           AVTGA DFQWMKLCNRF RFCYQVGGAFLCGY AF  +  I  IS+F+LFRHY PN F R
Sbjct: 121 AVTGARDFQWMKLCNRFHRFCYQVGGAFLCGYAAFSTLLVISFISAFSLFRHYSPNHFLR 180

Query: 181 LKSN 185
           LKS+
Sbjct: 181 LKSS 184

[Close]

BLAST of CmaCh12G009990 vs. TAIR 10
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 139.4 bits (350), Expect = 2.9e-33
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 6   QKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYN 65
           ++TE ILR   +  L+LT  L+G D QT +I +I K  SFR L A    +Y+D + AAYN
Sbjct: 5   RETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYN 64

Query: 66  ILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 125
           ++Q+   W + + K ++           W S+LLDQ  AY+VFA  +A  + +LL VTG+
Sbjct: 65  LVQLGLGWYNVEQKTSNPK---------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGS 124

Query: 126 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFRLKSN 185
            + QWMK C +F RFC+Q+G A +  Y A   M  +  IS+FNLFR Y P  FFR KS+
Sbjct: 125 RELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

[Close]

BLAST of CmaCh12G009990 vs. TAIR 10
Match: AT2G35760.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-21
Identity = 61/166 (36.75%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 8   TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNIL 67
           TE ILR    +  ++  +L+  D Q  +IF I KKA F  + A V+++ V+ +AA Y+++
Sbjct: 30  TELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLV 89

Query: 68  QICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAHD 127
           Q   C +    KG           L WA F  DQAVAYL  A   A  ++A  A  G  +
Sbjct: 90  QAVRCVVGLM-KGRVLFSKP----LAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEPE 149

Query: 128 FQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHY 174
            QWMK+CN + +FC QVG        A   M  I  IS+F +FR Y
Sbjct: 150 LQWMKICNMYGKFCNQVGEGIASALFACIGMVLISCISAFGVFRLY 190

[Close]

BLAST of CmaCh12G009990 vs. TAIR 10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 57/166 (34.34%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 8   TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNIL 67
           TE +LR    +  +L ++L+  D +   IF I K A +  + A V ++  + +AA Y++L
Sbjct: 11  TELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLL 70

Query: 68  QICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAHD 127
           Q   C +     GT K        L WA F  DQA+AYL  AA  A  E+ ++A  G  D
Sbjct: 71  QSVRCVV-----GTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEED 130

Query: 128 FQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHY 174
            QWM++C  + +FC Q+         A  AM  +  IS+F+LFR Y
Sbjct: 131 LQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

[Close]

BLAST of CmaCh12G009990 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 46.2 bits (108), Expect = 3.3e-05
Identity = 42/172 (24.42%), Postives = 76/172 (44.19%), Query Frame = 0


Query: 8   TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHID-----KKASFRSLHAFVVIMYVDSLAA 67
           T+ +LR       + +++++   KQT  IF          A F +  A +  +   S+A 
Sbjct: 29  TQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVAC 88

Query: 68  AYNILQICNCWISAQPKGTSKLGSGSHIC---LFWASFLLDQAVAYLVFAANTAGMEAAL 127
            Y+I+      +SA  K         H C   L     ++D  +  +V +A  AG   A 
Sbjct: 89  FYSIVSTF-VTVSAFKK---------HSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAY 148

Query: 128 LAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFR 172
           L + G  + +W K+C+ +++FC  VGGA      A   +  + +IS  +L++
Sbjct: 149 LGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYK 190

The following BLAST results are available for this feature:

BLAST of CmaCh12G009990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9IM09	4.6e-44	52.27	CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 S...	[more]
Q5K4H9	3.3e-42	50.28	CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1	[more]
A7Q6G6	6.2e-41	53.11	CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1	[more]
C6SZ04	4.6e-36	46.02	CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q8L8U9	4.0e-32	42.46	CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1	[more]

BLAST of CmaCh12G009990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQ91	8.5e-102	100.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1	[more]
A0A6J1FCZ2	1.8e-99	97.84	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1	[more]
A0A0A0LK62	1.2e-74	77.17	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1	[more]
A0A6J1DH36	6.8e-67	70.27	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1	[more]
A0A6J1KBE1	1.5e-61	66.85	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492374 PE=3 SV=1	[more]

BLAST of CmaCh12G009990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965970.1	1.8e-101	100.00	CASP-like protein 2C1 [Cucurbita maxima]	[more]
XP_023537147.1	9.7e-100	98.38	CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like prote...	[more]
XP_022938059.1	3.7e-99	97.84	CASP-like protein 2C1 [Cucurbita moschata]	[more]
XP_004149074.1	2.4e-74	77.17	CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021...	[more]
XP_038889630.1	4.0e-69	73.91	CASP-like protein 2C1 [Benincasa hispida]	[more]

BLAST of CmaCh12G009990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25830.1	2.9e-33	42.46	Uncharacterised protein family (UPF0497)	[more]
AT2G35760.1	2.5e-21	36.75	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	1.1e-16	34.34	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	3.3e-05	24.42	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..168 e-value: 3.2E-23 score: 80.2
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 7..157 e-value: 2.2E-31 score: 108.6
None	No IPR available	PANTHER	PTHR11615:SF241	CASP-LIKE PROTEIN 2C1	coord: 4..183
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G009990.1	CmaCh12G009990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding